Rh4AG276500

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000116
Physical Location & Seq
Forward (+)
59294518 .. 59299128
4611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG276500.1

Sequence Viewer

Length: 3426 bp
ATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCACGAATACGAAGTTTATACTTGAAAACCATACTAAGGCAAGATGTCGGCTTCTTTGATCAAGAAATCAACTCTGGGGAAATTGTTGGAAGGATGTCAGGTGATACTGTGCTCATTCAAGAGGCGATGGGTGAGAAGGTAGGAAGTTTTATCCAGTTAGTTGCAACGTTCATAGGTGGCTTTGGTATAGCATTTTTTAAGGGATCACTTCTCACCCTTGTCATGATATCCTCTATTCCCCCTCTAGTCTTATCTACTGCTGTCCTGAACCATTTCATAGTCAAATTGGCGTCCCATGGACAAGCTGCAAATTCAGGAGGAGCAAATGTGGTAGAGGAGACAATTAGTTCAATAAGAACTGTTGCATCATTCACAGGGGAGAAGCAAGCTATATCTAACTATAACTCCTCCTTAAGTAGAGCTTACAAGTCTGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTCTCGGTGTGGTTATGCTTATGGTATTCTCTACTTTCGCTTTGGCTATATGGTTTGGCGGAATAATGATACTTGAAAAAGGATATAAAGGAGGAGATGTCATCAATGTGATTATGGCTGTGTTGCTTGGCTCAGTGTCGCTTGGGAAAGCATCTCCTTGCATTAGTGCATTTGCTCCTGGACAAGCTGCAGCATATAAGATGTTTGAGACAATTAACAGAAAGCCGGAGATAGATGCATACAATACTAATGGGCGGGTATTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTTATTTTAGCTACCCCGCAAGAATGGATGAGCAAATATTCCATGGATTTTGTCTCTCTATACCTAGTGGTGCAACTGCTGCTTTGGTTGGACAGAGCGGAAGTGGTAAATCAACTGTAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCTGGTGAAGTTCTTATTGACGGTGTCAATCTCAAAGAGTTCCAGCTGAAATGGATCAGGCAGAAAATAGGTCTTGTCAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCAGCTAAATTCATAGATTTACTCCCTCAGGGAATAGACACAGTAGTCGGTCAGCATGGAACTCAGCTATCTGGGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGCAATTCTGAAGAACCCAAGAATTCTACTTTTAGATGAAGCCACAAGCGCTCTTGATGCAGAATCCGAACGAGTTGTGCAGGAGGCACTGGATAGAATTATGGTGAACCGGACTACTGTCATTGTAGCCCATCGCCTGAGTACAGTAAGGAATGCTGATACCATTGTTGTCATACATCGAGGAGTAATTGTTGAGCAAGGACCGCATTCAGAGCTAACTAAGGACCCTGATGGTGCATATCACCAGCTTATAAGGTTGCAAAAAAATATCACTGTGTCAAAACATAGTGGTCTAGATGTCCAGGATTCTATCTTACCCTTTGTAAGAGAGGAATCATCTCCAAGAATAAATAGTATTCCTTCTGCAAGCGGTATGCTTGAAACAGCACCTGTAGGGCCTGATATTCCTGCTACAGTTCTATCAAAAGGGCAGCCAAAGTTTTCACTTCGCCAACTTGCTTACCTGAACAAGCCAGAGATCCCAATTATATTACTAGGGACAATAGCTGCATCAGTTAATGGGGCAGTCTTCCCTGTTTTTGGGAGTTTACTGGCAAGTGTAATCAAGACGTTCTTTGAGTCACCTCATGAACTCCGTAAGGATTCAAAGTTTTGGGCCTTAATGTTTTTGGTTCTTGGAACGGCATCTTTGTTGGCCAATCCATCAAGAGCATACCTTTTTGCGGTGGCAGGATGTAGGCTAATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTATATGGAAGTAAGTTGGTTTGATGAAGCTGAACACTCAAGTGGTGCAATTGGTGCAAGGCTTTCTACGGATGCAGCGTCTTTGAGAGGGCTCGTTGGAGATGCTCTTGGTTTGGTTGTTCAGAATACAGCAACTGCAATTGCTGGGCTGATCATTGCTTTTGTTGCAGATTGGCAACTGGCTCTTATAATCCTTGTTCTGTTACCTTTATTAGGAGTAAATGGATATATTCAAGTCCAATTCACGAAAGGATTCAGTGCAGATGCAAAGAAAATGTATGAAGATTCGAGCCAAATAGCCAATGATGCTGTGGGGAGTATTCGGACACTTGCTTCCTTCTGTGCTGAAGAGAAGGTGATTGAGTTGTACCAGAGAAAGTGTGAAGGCCCTATTAAGAATGGGATAAGACAAGGGATAGTTACTGGGATAGGTTTTGGATTATCATTCTTCTTACAGTTTTCAGTGTTTGCCTTAAGTTTTTATACTGGAGGTCTACTTGTTTCAGCAGGAAAGACAACGTTCTCTGCTGTTTTCCAGGTTTTCTTTGCTCTCACTATGACTTCTATCGGACTTGCTCAGTCGACCTCCCTGGCACCTGATGTAAGTAAAGGAAAGGCTTCTGCTGCTTCAATATTCGCAATACTTGACCGGCAATCAGAAATAGACTCTAGTGATAACTCGGGGATGACTGTAGAACACTTGAAGGGAGAAATTGAATTTCACCGTATCAGTTTCAAGTATCCTAGTAGACCTAATGTGGAAATTTTCAACAATCTTTGCTTGACCATTAGTCATGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGATATCATTGATTCAAAGATTTTACGACCCTAATTCAGGTCACATTACATTGGATGGAATCGAGATCCAGAAACTGCAATTGAAATGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAACGACACTATCCGAGCCAACATTGCATATGGAAAAGATGGAGAGGCAACCGAGGCTGAAATTATAGCTTCAGCAGAACTGGCAAATGCTCACAAGTTTATTAGTAGTTTACAACATGGTTATGATACAATAGCAGGAGAGCGAGGAGTCCAACTGTCTGGTGGACAGAAGCAAAGAGTAGCTATCGCGCGAGCTATAATGAAGGCACCAAAGATATTACTGCTAGATGAAGCGACCAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCGTTAGACCGAGTAATGGTGGACCGAACCACAGTTGTGGTTGCTCATCGGTTATCAACAATCAAGGGTGCAGATTTGATTGCAGTTGTGAAAAATGGAGTCATTGCAGAGAAAGGGAAGCATGAAACTTTGATCAATATCACGGATGGCATTTATGCTTCTTTGGTAGCATTACATGCAACTGCCTCTTCTTAG

Protein Analysis

1141

Amino Acids

122.88

Weight (kDa)

6.88

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 212 3.8e-46 ABC transporter transmembrane region
ABC_tran PF00005 282 - 428 1.4e-32 ABC transporter
ABC_membrane PF00664 575 - 847 4.4e-56 ABC transporter transmembrane region
ABC_tran PF00005 916 - 1065 2.3e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1487, 2165
AasI GACNNNNNNGTC 1 cut(s) 1175
AccB1I GGYRCC 2 cut(s) 2569, 3160
AccB7I CCANNNNNTGG 1 cut(s) 950
AccBSI CCGCTC 1 cut(s) 894
AccI GTMKAC 3 cut(s) 2470, 2558, 2725
AccII CGCG 2 cut(s) 3143, 3145
AciI CCGC 7 cut(s) 558, 754, 813, 894, 1439, 1605, 1919
AclI AACGTT 2 cut(s) 203, 2495
AclWI GGATC 4 cut(s) 247, 1010, 1708, 2881
AcoI YGGCCR 1 cut(s) 1890
AcsI RAATTY 5 cut(s) 346, 1139, 1257, 2693, 2739
AcuI CTGAAG 4 cut(s) 1119, 1265, 2343, 3009
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 2 cut(s) 1378, 2345
AfeI AGCGCT 1 cut(s) 1285
AfiI CCNNNNNNNGG 7 cut(s) 72, 950, 1775, 1918, 2189, 2858, 3247
AflII CTTAAG 2 cut(s) 448, 2449
AhdI GACNNNNNGTC 1 cut(s) 2766
AjnI CCWGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
AleI CACNNNNGTG 2 cut(s) 2016, 3266
Alw21I GWGCWC 2 cut(s) 150, 3199
Alw26I GTCTC 7 cut(s) 22, 368, 506, 701, 771, 854, 2908
AlwI GGATC 4 cut(s) 247, 1010, 1708, 2881
AlwNI CAGNNNCTG 3 cut(s) 1625, 2111, 2896
Ama87I CYCGRG 1 cut(s) 2656
Aor51HI AGCGCT 1 cut(s) 1285
AoxI GGCC 4 cut(s) 1631, 1851, 1890, 2362
ApoI RAATTY 5 cut(s) 346, 1139, 1257, 2693, 2739
Asp700I GAANNNNTTC 3 cut(s) 308, 2228, 2593
AspLEI GCGC 2 cut(s) 1286, 3145
AspS9I GGNCC 6 cut(s) 1436, 1459, 1631, 1851, 2363, 3253
AvaI CYCGRG 1 cut(s) 2656
AvaII GGWCC 3 cut(s) 1436, 1459, 3253
AxyI CCTNAGG 1 cut(s) 1158
BaeI ACNNNNGTAYC 2 cut(s) 1386, 1419
BalI TGGCCA 1 cut(s) 1892
BanI GGYRCC 2 cut(s) 2569, 3160
BanII GRGCYC 1 cut(s) 2070
BbsI GAAGAC 1 cut(s) 1756
Bbv12I GWGCWC 2 cut(s) 150, 3199
BccI CCATC 8 cut(s) 157, 1079, 1374, 1460, 1906, 2870, 2987, 3371
BceAI ACGGC 1 cut(s) 1893
BcgI CGANNNNNNTGC 2 cut(s) 1941, 1975
BciT130I CCWGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
BciVI GTATCC 1 cut(s) 2727
BclI TGATCA 4 cut(s) 15, 94, 2127, 3363
BcoDI GTCTC 7 cut(s) 22, 368, 506, 701, 771, 854, 2908
BfaI CTAG 8 cut(s) 281, 861, 1233, 1529, 1730, 2646, 2721, 3179
BfmI CTRYAG 5 cut(s) 687, 1227, 1626, 1647, 2667
BfoI RGCGCY 1 cut(s) 1287
BfrI CTTAAG 2 cut(s) 448, 2449
BfuI GTATCC 1 cut(s) 2727
BlpI GCTNAGC 1 cut(s) 1119
Bme1390I CCNGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
Bme18I GGWCC 3 cut(s) 1436, 1459, 3253
BmeRI GACNNNNNGTC 1 cut(s) 2766
BmeT110I CYCGRG 1 cut(s) 2656
BmgT120I GGNCC 6 cut(s) 1436, 1459, 1631, 1851, 2363, 3253
BmiI GGNNCC 5 cut(s) 1035, 1461, 2571, 2943, 3162
BmrFI CCNGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
BmrI ACTGGG 1 cut(s) 2409
BmuI ACTGGG 1 cut(s) 2409
BoxI GACNNNNGTC 1 cut(s) 1352
BpiI GAAGAC 1 cut(s) 1756
BpmI CTGGAG 2 cut(s) 42, 2484
Bpu1102I GCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 1999
BsaBI GATNNNNATC 1 cut(s) 3368
BsaHI GRCGYC 1 cut(s) 326
BsaI GGTCTC 1 cut(s) 506
BsaJI CCNNGG 4 cut(s) 331, 838, 2565, 3006
BsaWI WCCGGW 1 cut(s) 1344
BsaXI ACNNNNNCTCC 8 cut(s) 348, 378, 425, 455, 582, 612, 1410, 1440
Bsc4I CCNNNNNNNGG 7 cut(s) 72, 950, 1775, 1918, 2189, 2858, 3247
Bse118I RCCGGY 1 cut(s) 2625
Bse1I ACTGG 9 cut(s) 25, 190, 1329, 1791, 2160, 2404, 2467, 3039, 3192
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 4 cut(s) 1962, 2130, 2976, 3333
Bse8I GATNNNNATC 1 cut(s) 3368
BseBI CCWGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
BseDI CCNNGG 4 cut(s) 331, 838, 2565, 3006
BseJI GATNNNNATC 1 cut(s) 3368
BseLI CCNNNNNNNGG 7 cut(s) 72, 950, 1775, 1918, 2189, 2858, 3247
BseMI GCAATG 4 cut(s) 1962, 2130, 2976, 3333
BseMII CTCAG 7 cut(s) 645, 779, 1110, 1172, 1208, 1364, 2567
BseNI ACTGG 9 cut(s) 25, 190, 1329, 1791, 2160, 2404, 2467, 3039, 3192
BseRI GAGGAG 6 cut(s) 369, 386, 433, 606, 1431, 3114
BseYI CCCAGC 1 cut(s) 2120
BsgI GTGCAG 4 cut(s) 21, 1334, 2256, 3321
Bsh1236I CGCG 2 cut(s) 3143, 3145
BshFI GGCC 4 cut(s) 1633, 1853, 1892, 2364
BshNI GGYRCC 2 cut(s) 2569, 3160
BsiHKAI GWGCWC 2 cut(s) 150, 3199
BsiHKCI CYCGRG 1 cut(s) 2656
BsiSI CCGG 3 cut(s) 725, 1345, 2626
BslFI GGGAC 3 cut(s) 313, 1221, 1747
BslI CCNNNNNNNGG 7 cut(s) 72, 950, 1775, 1918, 2189, 2858, 3247
BsmAI GTCTC 7 cut(s) 22, 368, 506, 701, 771, 854, 2908
BsmFI GGGAC 3 cut(s) 313, 1221, 1747
BsmI GAATGC 2 cut(s) 1393, 1441
BsnI GGCC 4 cut(s) 1633, 1853, 1892, 2364
Bso31I GGTCTC 1 cut(s) 506
BsoBI CYCGRG 1 cut(s) 2656
Bsp1286I GDGCHC 3 cut(s) 150, 2070, 3199
Bsp143I GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
Bsp1720I GCTNAGC 1 cut(s) 1119
Bsp19I CCATGG 2 cut(s) 331, 838
BspACI CCGC 7 cut(s) 558, 754, 813, 894, 1439, 1605, 1919
BspANI GGCC 4 cut(s) 1633, 1853, 1892, 2364
BspCNI CTCAG 7 cut(s) 644, 780, 1111, 1171, 1207, 1365, 2566
BspFNI CGCG 2 cut(s) 3143, 3145
BspHI TCATGA 2 cut(s) 258, 1822
BspLI GGNNCC 5 cut(s) 1035, 1461, 2571, 2943, 3162
BspMAI CTGCAG 1 cut(s) 691
BspPI GGATC 4 cut(s) 247, 1010, 1708, 2881
BspT107I GGYRCC 2 cut(s) 2569, 3160
BspTI CTTAAG 2 cut(s) 448, 2449
BspTNI GGTCTC 1 cut(s) 506
BsrBI CCGCTC 1 cut(s) 894
BsrDI GCAATG 4 cut(s) 1962, 2130, 2976, 3333
BsrFI RCCGGY 1 cut(s) 2625
BsrI ACTGG 9 cut(s) 25, 190, 1329, 1791, 2160, 2404, 2467, 3039, 3192
BssAI RCCGGY 1 cut(s) 2625
BssECI CCNNGG 4 cut(s) 331, 838, 2565, 3006
BssMI GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
BssNI GRCGYC 1 cut(s) 326
BssT1I CCWWGG 2 cut(s) 331, 838
Bst2UI CCWGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
Bst6I CTCTTC 2 cut(s) 1939, 2319
BstACI GRCGYC 1 cut(s) 326
BstAFI CTTAAG 2 cut(s) 448, 2449
BstAPI GCANNNNNTGC 3 cut(s) 875, 2030, 3407
BstC8I GCNNGC 4 cut(s) 423, 1125, 1603, 3147
BstDSI CCRYGG 2 cut(s) 331, 838
BstENI CCTNNNNNAGG 2 cut(s) 2187, 2856
BstFNI CGCG 2 cut(s) 3143, 3145
BstH2I RGCGCY 1 cut(s) 1287
BstHHI GCGC 2 cut(s) 1286, 3145
BstKTI GATC 8 cut(s) 18, 97, 242, 1005, 1716, 2130, 2889, 3366
BstMAI GTCTC 7 cut(s) 22, 368, 506, 701, 771, 854, 2908
BstMBI GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
BstNI CCWGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
BstNSI RCATGY 1 cut(s) 3410
BstPAI GACNNNNGTC 1 cut(s) 1352
BstSCI CCNGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
BstSFI CTRYAG 5 cut(s) 687, 1227, 1626, 1647, 2667
BstUI CGCG 2 cut(s) 3143, 3145
BstV2I GAAGAC 1 cut(s) 1756
BstX2I RGATCY 2 cut(s) 1713, 2886
BstXI CCANNNNNNTGG 2 cut(s) 3113, 3268
BstYI RGATCY 2 cut(s) 1713, 2886
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 1 cut(s) 2727
BsuRI GGCC 4 cut(s) 1633, 1853, 1892, 2364
BtgI CCRYGG 2 cut(s) 331, 838
BtgZI GCGATG 2 cut(s) 176, 1352
BtsIMutI CAGTG 8 cut(s) 18, 639, 1322, 1506, 2239, 2445, 2826, 3199
Cac8I GCNNGC 4 cut(s) 423, 1125, 1603, 3147
CaiI CAGNNNCTG 3 cut(s) 1625, 2111, 2896
CciI TCATGA 2 cut(s) 258, 1822
CfoI GCGC 2 cut(s) 1286, 3145
Cfr10I RCCGGY 1 cut(s) 2625
Cfr13I GGNCC 6 cut(s) 1436, 1459, 1631, 1851, 2363, 3253
CseI GACGC 2 cut(s) 315, 2043
Csp6I GTAC 2 cut(s) 1377, 2344
CviAII CATG 9 cut(s) 259, 332, 839, 1187, 1823, 2771, 3071, 3353, 3407
CviQI GTAC 2 cut(s) 1377, 2344
DpnI GATC 8 cut(s) 17, 96, 241, 1004, 1715, 2129, 2888, 3365
DpnII GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
DrdI GACNNNNNNGTC 1 cut(s) 1175
DriI GACNNNNNGTC 1 cut(s) 2766
DseDI GACNNNNNNGTC 1 cut(s) 1175
EaeI YGGCCR 1 cut(s) 1890
Eam1104I CTCTTC 2 cut(s) 1939, 2319
Eam1105I GACNNNNNGTC 1 cut(s) 2766
EarI CTCTTC 2 cut(s) 1939, 2319
EciI GGCGGA 1 cut(s) 573
Eco130I CCWWGG 2 cut(s) 331, 838
Eco24I GRGCYC 1 cut(s) 2070
Eco31I GGTCTC 1 cut(s) 506
Eco32I GATATC 2 cut(s) 264, 2826
Eco47I GGWCC 3 cut(s) 1436, 1459, 3253
Eco47III AGCGCT 1 cut(s) 1285
Eco57I CTGAAG 4 cut(s) 1119, 1265, 2343, 3009
Eco81I CCTNAGG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 2656
EcoNI CCTNNNNNAGG 2 cut(s) 2187, 2856
EcoO109I RGGNCCY 3 cut(s) 1459, 1631, 2363
EcoRI GAATTC 1 cut(s) 1257
EcoRII CCWGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
EcoRV GATATC 2 cut(s) 264, 2826
EcoT14I CCWWGG 2 cut(s) 331, 838
EcoT22I ATGCAT 1 cut(s) 739
EcoT38I GRGCYC 1 cut(s) 2070
ErhI CCWWGG 2 cut(s) 331, 838
FaeI CATG 9 cut(s) 262, 335, 842, 1190, 1826, 2774, 3074, 3356, 3410
FalI AAGNNNNNCTT 4 cut(s) 442, 474, 1793, 1825
FaqI GGGAC 3 cut(s) 313, 1221, 1747
FatI CATG 9 cut(s) 258, 331, 838, 1186, 1822, 2770, 3070, 3352, 3406
FauI CCCGC 2 cut(s) 747, 820
FauNDI CATATG 1 cut(s) 2983
FbaI TGATCA 4 cut(s) 15, 94, 2127, 3363
FblI GTMKAC 3 cut(s) 2470, 2558, 2725
FriOI GRGCYC 1 cut(s) 2070
FspBI CTAG 8 cut(s) 281, 861, 1233, 1529, 1730, 2646, 2721, 3179
GlaI GCGC 2 cut(s) 1285, 3144
GsaI CCCAGC 1 cut(s) 2124
GsuI CTGGAG 2 cut(s) 42, 2484
HaeII RGCGCY 1 cut(s) 1287
HaeIII GGCC 4 cut(s) 1633, 1853, 1892, 2364
HapII CCGG 3 cut(s) 725, 1345, 2626
HgaI GACGC 2 cut(s) 315, 2043
HhaI GCGC 2 cut(s) 1286, 3145
Hin1I GRCGYC 1 cut(s) 326
Hin1II CATG 9 cut(s) 262, 335, 842, 1190, 1826, 2774, 3074, 3356, 3410
Hin6I GCGC 2 cut(s) 1284, 3143
HinP1I GCGC 2 cut(s) 1284, 3143
HincII GTYRAC 1 cut(s) 2559
HindII GTYRAC 1 cut(s) 2559
HpaII CCGG 3 cut(s) 725, 1345, 2626
Hpy166II GTNNAC 9 cut(s) 1047, 1342, 1784, 2471, 2559, 2726, 3065, 3119, 3253
Hpy8I GTNNAC 9 cut(s) 1047, 1342, 1784, 2471, 2559, 2726, 3065, 3119, 3253
HpyCH4IV ACGT 3 cut(s) 203, 1805, 2495
HpySE526I ACGT 3 cut(s) 203, 1805, 2495
Hsp92I GRCGYC 1 cut(s) 326
Hsp92II CATG 9 cut(s) 262, 335, 842, 1190, 1826, 2774, 3074, 3356, 3410
HspAI GCGC 2 cut(s) 1284, 3143
Ksp22I TGATCA 4 cut(s) 15, 94, 2127, 3363
Kzo9I GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
LmnI GCTCC 3 cut(s) 356, 679, 2941
MaeI CTAG 8 cut(s) 281, 861, 1233, 1529, 1730, 2646, 2721, 3179
MaeII ACGT 3 cut(s) 203, 1805, 2495
MaeIII GTNAC 4 cut(s) 1815, 2178, 2395, 2861
MalI GATC 8 cut(s) 17, 96, 241, 1004, 1715, 2129, 2888, 3365
MbiI CCGCTC 1 cut(s) 894
MboI GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
MboII GAAGA 8 cut(s) 1112, 1258, 1756, 1956, 2270, 2336, 2416, 3411
MfeI CAATTG 4 cut(s) 2025, 2115, 2781, 2900
MflI RGATCY 2 cut(s) 1713, 2886
MhlI GDGCHC 3 cut(s) 150, 2070, 3199
MlsI TGGCCA 1 cut(s) 1892
MluNI TGGCCA 1 cut(s) 1892
MlyI GAGTC 5 cut(s) 1823, 1956, 2636, 3111, 3339
MmeI TCCRAC 4 cut(s) 103, 865, 2053, 3130
Mox20I TGGCCA 1 cut(s) 1892
Mph1103I ATGCAT 1 cut(s) 739
MroXI GAANNNNTTC 3 cut(s) 308, 2228, 2593
MscI TGGCCA 1 cut(s) 1892
MseI TTAA 8 cut(s) 234, 449, 714, 1752, 1856, 2370, 2450, 2955
MslI CAYNNNNRTG 4 cut(s) 605, 2016, 3075, 3266
Msp20I TGGCCA 1 cut(s) 1892
MspA1I CMGCKG 1 cut(s) 994
MspCI CTTAAG 2 cut(s) 448, 2449
MspI CCGG 3 cut(s) 725, 1345, 2626
MspR9I CCNGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
MunI CAATTG 4 cut(s) 2025, 2115, 2781, 2900
Mva1269I GAATGC 2 cut(s) 1393, 1441
MvaI CCWGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
MvnI CGCG 2 cut(s) 3143, 3145
NcoI CCATGG 2 cut(s) 331, 838
NdeI CATATG 1 cut(s) 2983
NdeII GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
NlaIII CATG 9 cut(s) 262, 335, 842, 1190, 1826, 2774, 3074, 3356, 3410
NlaIV GGNNCC 5 cut(s) 1035, 1461, 2571, 2943, 3162
NmuCI GTSAC 2 cut(s) 1815, 2861
NsiI ATGCAT 1 cut(s) 739
NspI RCATGY 1 cut(s) 3410
OliI CACNNNNGTG 2 cut(s) 2016, 3266
PagI TCATGA 2 cut(s) 258, 1822
PcsI WCGNNNNNNNCGW 1 cut(s) 2051
PctI GAATGC 2 cut(s) 1393, 1441
PdmI GAANNNNTTC 3 cut(s) 308, 2228, 2593
PfeI GAWTC 9 cut(s) 1298, 1541, 1568, 1838, 2229, 2261, 2833, 2880, 3209
PflFI GACNNNGTC 1 cut(s) 971
PflMI CCANNNNNTGG 1 cut(s) 950
PfoI TCCNGGA 2 cut(s) 676, 1536
PleI GAGTC 5 cut(s) 1822, 1955, 2636, 3110, 3338
PpsI GAGTC 5 cut(s) 1822, 1955, 2636, 3110, 3338
PpuMI RGGWCCY 1 cut(s) 1459
PshAI GACNNNNGTC 1 cut(s) 1352
PsiI TTATAA 2 cut(s) 1487, 2165
Psp1406I AACGTT 2 cut(s) 203, 2495
Psp5II RGGWCCY 1 cut(s) 1459
Psp6I CCWGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
PspFI CCCAGC 1 cut(s) 2120
PspGI CCWGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
PspN4I GGNNCC 5 cut(s) 1035, 1461, 2571, 2943, 3162
PspPI GGNCC 6 cut(s) 1436, 1459, 1631, 1851, 2363, 3253
PspPPI RGGWCCY 1 cut(s) 1459
PstI CTGCAG 1 cut(s) 691
PstNI CAGNNNCTG 3 cut(s) 1625, 2111, 2896
PsuI RGATCY 2 cut(s) 1713, 2886
PsyI GACNNNGTC 1 cut(s) 971
PvuII CAGCTG 1 cut(s) 994
RsaI GTAC 2 cut(s) 1378, 2345
RsaNI GTAC 2 cut(s) 1377, 2344
RseI CAYNNNNRTG 4 cut(s) 605, 2016, 3075, 3266
SalI GTCGAC 1 cut(s) 2557
SaqAI TTAA 8 cut(s) 234, 449, 714, 1752, 1856, 2370, 2450, 2955
Sau3AI GATC 8 cut(s) 15, 94, 239, 1002, 1713, 2127, 2886, 3363
Sau96I GGNCC 6 cut(s) 1436, 1459, 1631, 1851, 2363, 3253
SchI GAGTC 5 cut(s) 1823, 1956, 2636, 3111, 3339
ScrFI CCNGG 6 cut(s) 678, 1031, 1538, 2513, 2567, 2939
SduI GDGCHC 3 cut(s) 150, 2070, 3199
SfcI CTRYAG 5 cut(s) 687, 1227, 1626, 1647, 2667
SinI GGWCC 3 cut(s) 1436, 1459, 3253
SmiMI CAYNNNNRTG 4 cut(s) 605, 2016, 3075, 3266
SmlI CTYRAG 3 cut(s) 448, 2014, 2449
SmoI CTYRAG 3 cut(s) 448, 2014, 2449
SsiI CCGC 7 cut(s) 558, 754, 813, 894, 1439, 1605, 1919
SspI AATATT 3 cut(s) 834, 1069, 2610
SspMI CTAG 8 cut(s) 281, 861, 1233, 1529, 1730, 2646, 2721, 3179
StyD4I CCNGG 6 cut(s) 676, 1029, 1536, 2511, 2565, 2937
StyI CCWWGG 2 cut(s) 331, 838
TaiI ACGT 3 cut(s) 206, 1808, 2498
TaqI TCGA 4 cut(s) 1414, 2264, 2558, 2883
TaqII GACCGA 3 cut(s) 1169, 3255, 3270
TatI WGTACW 1 cut(s) 1376
TfiI GAWTC 9 cut(s) 1298, 1541, 1568, 1838, 2229, 2261, 2833, 2880, 3209
Tru1I TTAA 8 cut(s) 234, 449, 714, 1752, 1856, 2370, 2450, 2955
Tru9I TTAA 8 cut(s) 234, 449, 714, 1752, 1856, 2370, 2450, 2955
TscAI CASTG 8 cut(s) 25, 639, 1329, 1513, 2239, 2445, 2826, 3199
TseFI GTSAC 2 cut(s) 1815, 2861
Tsp45I GTSAC 2 cut(s) 1815, 2861
TspGWI ACGGA 3 cut(s) 1820, 2060, 3389
TspRI CASTG 8 cut(s) 25, 639, 1329, 1513, 2239, 2445, 2826, 3199
Tth111I GACNNNGTC 1 cut(s) 971
Van91I CCANNNNNTGG 1 cut(s) 950
Vha464I CTTAAG 2 cut(s) 448, 2449
VpaK11BI GGWCC 3 cut(s) 1436, 1459, 3253
XagI CCTNNNNNAGG 2 cut(s) 2187, 2856
XapI RAATTY 5 cut(s) 346, 1139, 1257, 2693, 2739
XbaI TCTAGA 1 cut(s) 1528
XceI RCATGY 1 cut(s) 3410
XcmI CCANNNNNNNNNTGG 2 cut(s) 2284, 3113
XmiI GTMKAC 3 cut(s) 2470, 2558, 2725
XmnI GAANNNNTTC 3 cut(s) 308, 2228, 2593
XspI CTAG 8 cut(s) 281, 861, 1233, 1529, 1730, 2646, 2721, 3179
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.