Rh4AG276700

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
59318064 .. 59323404
5341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG276700.1

Sequence Viewer

Length: 3687 bp
ATGTCTGAGGAGAATTCTTTGGGTGGAGATGCAATCACCAAGCAAGACACTGCATCAAATAGCCACTCAGCAGTGACGGTGGGTTCCAAAGAAAACCGACAAGATATAAGCAAGAGCAAGGAGGATGGAACTAAAACAGTACCACTTTACAAACTTTTCTCATTTGCTGATTCCACGGATTACCTATTAATGTTTGTTGGTACAATCAGCGCTATTGAGATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCAAGAATTAGAAGTTTATACTTGACAACAATATTAAGGCAAGATGTTGGCTTTTTTGATAAAGAAATCAACAGTGGGGAAATTATTGGGAGGATGTCAGGTGATACTGTGCTCATCCAAGAGGCAATGGGTGAGAAGATAGGAAGTTTTATCCAGTTAGTTGCAACATTCATAGGTGGCTTTGTTATAGCATTTTCTGAGGGATGGCTTCTCACCCTTGTCATGCTATCCTCTATTCCACCTCTTGTCTTCTCTGGTGCTGTCATGAACCATTTCGTAGTGAAATTGGCGTCCCGTGGACAAGCTGCATATTCAGGAGGAGCAACTGTGGTAGAACAGACAATTGGTTCAATCAGAACTGTTGCATCATTCACGGGGGAGAAACAAGCTATATATAACTACAACAACTCCTTAAATAAGGCATACACATCCGGTGTACAAGAGGGATGGGCATCTGGTCTGGGTTTTGGTGTGCTTATGCTTGTGGTATTTTGTACTTACGCCTTGGCTGTATGGTCTCTTGGGAAAGCATCTCCATGCATGAGTGCATTTGCTCCTGGACAAGCGGCAGCTTTTAAGATGTTTGACGCGATTAACAGAAAGCCGAAGATAGATGTGTATGATACTAATGGGCGAGTTTTAAAAGATATTAGTGGAGACATAGAACTGAGGGATGTTTATTTTAGTTATCCCACAAGACCAGAGGAGCAACTATTCCAAGGATTTTCACTCTTAATACAAAGCGGTGCAACTGCTGCTTTGGTTGGACAGAGCGGAAGTGGTAAATCAACCGTTATCAGTATGATTGAGAGGTTTTATGACCCCCAGGCTGGTGAAGTTCTTATTGATGGTGTTAATCTGAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATAGGCCTCGTCAGCCAGGAACCAGTTTTATTTACAGGTAGCATTAAAGATAATATTGCCTATGGAAAGGATGGTGCAACAACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCTGCAAAATTCATAGATATATTGCCACTGGGAATAGATACAATGGTTGGTGAGCATGGAACACAGCTATCTGGAGGACAAAAGCAACGAATTGCTATAGCTAGAGCAATTCTGAAGAACCCAAAAATTCTACTTTTAGATGAAGCCACAAGCGCTCTTGACGCAAATTCTGAGAGAATTGTGCAGGAGGCACTAGACAAAGTAATGATCAACCGAACTACTGTCATTGTAGCCCACCGCTTGAGCACAGTAAGGAATGCTGACACCATTGCTGTAATACATCAAGGAGCAGTTGTTGAAGAAGGACCACATTCTGAGCTAATTAAGGATCCTGATGGAGCATATAGCCAGCTTATAAGGTTGCAAGAAATTATTAGCGTGTCAGAACATACTGGTCTAAATATTGAGGAATCATTTCCAAGAAGAAGTAGTGGTCGTCACTCATTCTCAATCTCATATGGTATTCCTACTGCAAGCGGTGTGCTTGAAACAACACCATTAGAACTTGATATTCGTGCTTTAACACCATCGAAAGGGACTCCAGAAGTCTCTCTTCGCCGCCTGGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCAGTCAATGGGGTAATCTTCCCTGTTTATGGTAGTTTGTTGTCAACTGTAATCAAGACCTTCTTTGAGCCGCCTCATGAACTCCGTAAGAATTCAAAGTTTTGGGCAACAATCTTTGTTATTCTTGGAGTGGTATCTTTCTTGGCACAATCATCAAGAGCATACCTTTTTGCTGTGGCGGGTTGCAGGTTAATAAGACGAGTTCGAGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGAGAACTCAAGTGGTGCAATTGGGGCAAGGCTTTCTACAGATGCAGCTTCTTTGAGAGGACTTGTTGGAGATGCTCTTGCTTTGGTGGTTCAGAATACAGCAACAGCAATTGCTGGGATGATTATTGCTTTTGGTGCAAATTGGCAACTTTCTCTTGTAATGCTTGTTCTGTTACCTTTATTAGGAGTAAATGGATATTTTCAAGTCCAGTACATGAAAGGATTCAGTGCAGATGCAAAGAAAATGTACGAGGACGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAATTGCTTCCTTTTGTGCTGAACAGAAGGTGATGGAGTTGTACAAGAAAAAATGTGAAGGCCCAATTAAGACGGGGATAAGACAAGGGTTGGTTTCTGGGATAGGTTTTGGGCTATCTCTTTTCTTACAGTTTTCAGTGTTCGCTGTAATTTTTTATATTGGAGGTCTACTTGTTGCAGCAGGCAAGACAACATTCTCTGCAGTTTTCCAGGTTTTCTTTGCTGCCACTATGGCTTCTGTTGGACTCGCCCAGTCAAGCTCCCTCGCACCTGATGTAAGTAAAGGAAAGGGTTCTGCTGCTTCAATATTCGCAATTCTTGACCGGAAATCAAGAATAGACTCTAGTGATAACTCCGGCATGACAATAGAAAATGTGAAGGGAGAAATTGAATTTCACCGTGTCAGTTTCAAGTATCCTAGTAGACCTGACGTGCAAATTTTCAACGATCTTTGCTTGACCATTAGTCATGGGAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGGAAATCGACAGTGGTCTCTTTGCTCCAGAGATTTTACGACCCCAACTCTGGTCACATTACATTGGATGGAATCGAAATCCAGAAACTACAGTTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGTTGTTTAACGACACTATCCGAGCCAACATTGCATATGGAAAGGATGGAGAGGCAACCGAGGCTGAAATTATAGCTGCTGCAGAACTCGCAAATGCACACCAGTTCATTAGTAGTTTACAACATGTGAGTGCTGAGTTAAAAAGTTTTAGCAAATTCTTTTCGGCTACATTCAGTATTAATATTATATTACCTTGGCGCTGCATAAATGCTGAAGACTCATGCATGTTACATTTAAAAACAATGCAGGGTTACGATACAATAACTGGAGAGCGAGGGGTCCAATTGTCCGGCGGACAGAAGCAAAGAATAGCTACTGCAAGAGCTATTATGAAGGCACCTAAGATATTACTACTAGATGAAGCCACAAGTGCTCTTGATGCTGAATCTGAACGTGTGGTTCAAGATGCATTGGACCGAATTATGGTGGATCGGACAACAATCGTGGTTGCTCACCGGTTGTCCACAATCAAGGGTGCAGATTTGATTGCTGTGGTAAAAAATGGAGCCATTGCAGAGAAAGGAAAGCATGAAACTTTGATCAATATCAGCAATGGCATTTATGCTTCTTTGGTAGAATTACATGCAAGTGCCTCATTTTAG

Protein Analysis

1228

Amino Acids

132.8

Weight (kDa)

6.57

Isoelectric Point (pI)

35.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 62 - 257 9e-43 ABC transporter transmembrane region
ABC_tran PF00005 325 - 473 6.6e-33 ABC transporter
ABC_membrane PF00664 621 - 893 3.2e-54 ABC transporter transmembrane region
ABC_tran PF00005 962 - 1152 1.2e-29 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1622
Acc36I ACCTGC 1 cut(s) 2061
AccB1I GGYRCC 1 cut(s) 3421
AccBSI CCGCTC 1 cut(s) 1029
AccI GTMKAC 2 cut(s) 2608, 2863
AccII CGCG 1 cut(s) 845
AciI CCGC 9 cut(s) 821, 999, 1029, 1504, 1743, 1825, 1955, 2063, 3378
AclWI GGATC 4 cut(s) 1145, 1589, 1602, 3522
AcsI RAATTY 8 cut(s) 13, 1274, 1392, 1432, 1975, 2831, 2877, 3239
AcuI CTGAAG 3 cut(s) 1254, 1400, 3318
AcyI GRCGYC 1 cut(s) 545
AfaI GTAC 8 cut(s) 141, 202, 693, 751, 1873, 2357, 2393, 2483
AfeI AGCGCT 2 cut(s) 211, 1420
AfiI CCNNNNNNNGG 6 cut(s) 1085, 1799, 1913, 2327, 2996, 3508
AflIII ACRYGT 2 cut(s) 3208, 3478
AgeI ACCGGT 1 cut(s) 3540
AhdI GACNNNNNGTC 1 cut(s) 2904
AjiI CACGTC 1 cut(s) 2872
AjnI CCWGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
Alw21I GWGCWC 3 cut(s) 369, 1514, 3460
Alw26I GTCTC 6 cut(s) 241, 777, 906, 1819, 2968, 3046
AlwI GGATC 4 cut(s) 1145, 1589, 1602, 3522
Aor51HI AGCGCT 2 cut(s) 211, 1420
AoxI GGCC 2 cut(s) 1153, 2500
ApoI RAATTY 8 cut(s) 13, 1274, 1392, 1432, 1975, 2831, 2877, 3239
AseI ATTAAT 2 cut(s) 188, 3264
AsiGI ACCGGT 1 cut(s) 3540
Asp700I GAANNNNTTC 5 cut(s) 527, 1121, 1680, 2366, 2731
AspLEI GCGC 3 cut(s) 212, 1421, 3285
AspS9I GGNCC 4 cut(s) 1571, 2501, 3364, 3499
AvaII GGWCC 3 cut(s) 1571, 3364, 3499
BaeI ACNNNNGTAYC 4 cut(s) 1296, 1329, 1863, 1896
BamHI GGATCC 1 cut(s) 1594
BanI GGYRCC 1 cut(s) 3421
BarI GAAGNNNNNNTAC 2 cut(s) 2099, 2131
BbsI GAAGAC 3 cut(s) 496, 2921, 3306
Bbv12I GWGCWC 3 cut(s) 369, 1514, 3460
BcgI CGANNNNNNTGC 2 cut(s) 2079, 2113
BciT130I CCWGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
BciVI GTATCC 1 cut(s) 2865
BclI TGATCA 3 cut(s) 234, 1473, 3624
BcoDI GTCTC 6 cut(s) 241, 777, 906, 1819, 2968, 3046
BfaI CTAG 7 cut(s) 1368, 1460, 1868, 2415, 2784, 2859, 3440
BfmI CTRYAG 6 cut(s) 1362, 1875, 2181, 2640, 3035, 3165
BfoI RGCGCY 3 cut(s) 213, 1422, 3286
BfuAI ACCTGC 1 cut(s) 2061
BfuI GTATCC 1 cut(s) 2865
BglI GCCNNNNNGGC 1 cut(s) 2672
BlpI GCTNAGC 1 cut(s) 1254
Bme1390I CCNGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
Bme18I GGWCC 3 cut(s) 1571, 3364, 3499
BmeRI GACNNNNNGTC 1 cut(s) 2904
BmgBI CACGTC 1 cut(s) 2872
BmgT120I GGNCC 4 cut(s) 1571, 2501, 3364, 3499
BmiI GGNNCC 7 cut(s) 85, 1170, 1596, 3081, 3365, 3423, 3592
BmrFI CCNGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
BmrI ACTGGG 2 cut(s) 1304, 2686
BmuI ACTGGG 2 cut(s) 1304, 2686
BoxI GACNNNNGTC 1 cut(s) 2960
BpiI GAAGAC 3 cut(s) 496, 2921, 3306
BpmI CTGGAG 5 cut(s) 261, 1359, 1791, 2957, 3372
Bpu1102I GCTNAGC 1 cut(s) 1254
BpuEI CTTGAG 2 cut(s) 1528, 2137
BsaBI GATNNNNATC 2 cut(s) 706, 3629
BsaHI GRCGYC 1 cut(s) 545
BsaI GGTCTC 2 cut(s) 777, 2968
BsaJI CCNNGG 7 cut(s) 174, 550, 759, 973, 1080, 3144, 3278
BsaWI WCCGGW 3 cut(s) 686, 2763, 3540
BsaXI ACNNNNNCTCC 8 cut(s) 567, 597, 647, 677, 1545, 1575, 3071, 3101
Bsc4I CCNNNNNNNGG 6 cut(s) 1085, 1799, 1913, 2327, 2996, 3508
Bse118I RCCGGY 1 cut(s) 3540
Bse3DI GCAATG 6 cut(s) 387, 1533, 2100, 3114, 3594, 3643
Bse8I GATNNNNATC 2 cut(s) 706, 3629
BseBI CCWGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
BseDI CCNNGG 7 cut(s) 174, 550, 759, 973, 1080, 3144, 3278
BseJI GATNNNNATC 2 cut(s) 706, 3629
BseLI CCNNNNNNNGG 6 cut(s) 1085, 1799, 1913, 2327, 2996, 3508
BseMI GCAATG 6 cut(s) 387, 1533, 2100, 3114, 3594, 3643
BseMII CTCAG 8 cut(s) 81, 444, 914, 1245, 1428, 1572, 2136, 3210
BseRI GAGGAG 3 cut(s) 23, 588, 974
BseYI CCCAGC 1 cut(s) 2258
BsgI GTGCAG 3 cut(s) 1469, 2394, 3582
Bsh1236I CGCG 1 cut(s) 845
BshFI GGCC 2 cut(s) 1155, 2502
BshNI GGYRCC 1 cut(s) 3421
BshTI ACCGGT 1 cut(s) 3540
BsiHKAI GWGCWC 3 cut(s) 369, 1514, 3460
BsiSI CCGG 5 cut(s) 687, 2764, 2796, 3375, 3541
BslFI GGGAC 2 cut(s) 532, 1816
BslI CCNNNNNNNGG 6 cut(s) 1085, 1799, 1913, 2327, 2996, 3508
BsmAI GTCTC 6 cut(s) 241, 777, 906, 1819, 2968, 3046
BsmFI GGGAC 2 cut(s) 532, 1816
BsmI GAATGC 1 cut(s) 1528
BsnI GGCC 2 cut(s) 1155, 2502
Bso31I GGTCTC 2 cut(s) 777, 2968
Bsp1286I GDGCHC 3 cut(s) 369, 1514, 3460
Bsp1407I TGTACA 2 cut(s) 691, 2481
Bsp143I GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
Bsp1720I GCTNAGC 1 cut(s) 1254
BspACI CCGC 9 cut(s) 821, 999, 1029, 1504, 1743, 1825, 1955, 2063, 3378
BspANI GGCC 2 cut(s) 1155, 2502
BspCNI CTCAG 8 cut(s) 80, 445, 915, 1246, 1429, 1573, 2137, 3211
BspFNI CGCG 1 cut(s) 845
BspHI TCATGA 2 cut(s) 519, 1960
BspLI GGNNCC 7 cut(s) 85, 1170, 1596, 3081, 3365, 3423, 3592
BspMAI CTGCAG 2 cut(s) 2644, 3169
BspMI ACCTGC 1 cut(s) 2061
BspPI GGATC 4 cut(s) 1145, 1589, 1602, 3522
BspT107I GGYRCC 1 cut(s) 3421
BspTNI GGTCTC 2 cut(s) 777, 2968
BsrBI CCGCTC 1 cut(s) 1029
BsrDI GCAATG 6 cut(s) 387, 1533, 2100, 3114, 3594, 3643
BsrFI RCCGGY 1 cut(s) 3540
BsrGI TGTACA 2 cut(s) 691, 2481
BssAI RCCGGY 1 cut(s) 3540
BssECI CCNNGG 7 cut(s) 174, 550, 759, 973, 1080, 3144, 3278
BssMI GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
BssNI GRCGYC 1 cut(s) 545
BssT1I CCWWGG 3 cut(s) 759, 973, 3278
Bst2UI CCWGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
Bst6I CTCTTC 1 cut(s) 1824
BstACI GRCGYC 1 cut(s) 545
BstAPI GCANNNNNTGC 1 cut(s) 1010
BstAUI TGTACA 2 cut(s) 691, 2481
BstC8I GCNNGC 5 cut(s) 1260, 1616, 1741, 2404, 2623
BstDSI CCRYGG 2 cut(s) 174, 550
BstENI CCTNNNNNAGG 1 cut(s) 2325
BstFNI CGCG 1 cut(s) 845
BstH2I RGCGCY 3 cut(s) 213, 1422, 3286
BstHHI GCGC 3 cut(s) 212, 1421, 3285
BstKTI GATC 7 cut(s) 237, 1140, 1476, 1597, 2890, 3517, 3627
BstMAI GTCTC 6 cut(s) 241, 777, 906, 1819, 2968, 3046
BstMBI GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
BstNI CCWGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
BstNSI RCATGY 3 cut(s) 3212, 3313, 3671
BstPAI GACNNNNGTC 1 cut(s) 2960
BstSCI CCNGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
BstSFI CTRYAG 6 cut(s) 1362, 1875, 2181, 2640, 3035, 3165
BstUI CGCG 1 cut(s) 845
BstV2I GAAGAC 3 cut(s) 496, 2921, 3306
BstX2I RGATCY 1 cut(s) 1594
BstYI RGATCY 1 cut(s) 1594
BsuI GTATCC 1 cut(s) 2865
BsuRI GGCC 2 cut(s) 1155, 2502
BtgI CCRYGG 2 cut(s) 174, 550
BtrI CACGTC 1 cut(s) 2872
BtsI GCAGTG 2 cut(s) 48, 78
BtsIMutI CAGTG 9 cut(s) 48, 78, 237, 334, 1292, 1863, 2377, 2583, 2964
BveI ACCTGC 1 cut(s) 2061
Cac8I GCNNGC 5 cut(s) 1260, 1616, 1741, 2404, 2623
CciI TCATGA 2 cut(s) 519, 1960
CfoI GCGC 3 cut(s) 212, 1421, 3285
Cfr10I RCCGGY 1 cut(s) 3540
Cfr13I GGNCC 4 cut(s) 1571, 2501, 3364, 3499
CseI GACGC 4 cut(s) 534, 851, 1436, 2408
Csp6I GTAC 8 cut(s) 140, 201, 692, 750, 1872, 2356, 2392, 2482
CspAI ACCGGT 1 cut(s) 3540
CspCI CAANNNNNGTGG 2 cut(s) 3510, 3545
CviQI GTAC 8 cut(s) 140, 201, 692, 750, 1872, 2356, 2392, 2482
DpnI GATC 7 cut(s) 236, 1139, 1475, 1596, 2889, 3516, 3626
DpnII GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
DraI TTTAAA 2 cut(s) 897, 3321
DriI GACNNNNNGTC 1 cut(s) 2904
Eam1104I CTCTTC 1 cut(s) 1824
Eam1105I GACNNNNNGTC 1 cut(s) 2904
EarI CTCTTC 1 cut(s) 1824
EciI GGCGGA 1 cut(s) 3393
Eco130I CCWWGG 3 cut(s) 759, 973, 3278
Eco147I AGGCCT 1 cut(s) 1155
Eco31I GGTCTC 2 cut(s) 777, 2968
Eco47I GGWCC 3 cut(s) 1571, 3364, 3499
Eco47III AGCGCT 2 cut(s) 211, 1420
Eco57I CTGAAG 3 cut(s) 1254, 1400, 3318
EcoNI CCTNNNNNAGG 1 cut(s) 2325
EcoRI GAATTC 2 cut(s) 13, 1975
EcoRII CCWGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
EcoT14I CCWWGG 3 cut(s) 759, 973, 3278
EcoT22I ATGCAT 3 cut(s) 797, 3311, 3496
ErhI CCWWGG 3 cut(s) 759, 973, 3278
FalI AAGNNNNNCTT 4 cut(s) 1803, 1835, 1931, 1963
FaqI GGGAC 2 cut(s) 532, 1816
FauI CCCGC 1 cut(s) 2056
FauNDI CATATG 2 cut(s) 1723, 3121
FbaI TGATCA 3 cut(s) 234, 1473, 3624
FblI GTMKAC 2 cut(s) 2608, 2863
FspBI CTAG 7 cut(s) 1368, 1460, 1868, 2415, 2784, 2859, 3440
GlaI GCGC 3 cut(s) 211, 1420, 3284
GsaI CCCAGC 1 cut(s) 2262
GsuI CTGGAG 5 cut(s) 261, 1359, 1791, 2957, 3372
HaeII RGCGCY 3 cut(s) 213, 1422, 3286
HaeIII GGCC 2 cut(s) 1155, 2502
HapII CCGG 5 cut(s) 687, 2764, 2796, 3375, 3541
HgaI GACGC 4 cut(s) 534, 851, 1436, 2408
HhaI GCGC 3 cut(s) 212, 1421, 3285
Hin1I GRCGYC 1 cut(s) 545
Hin6I GCGC 3 cut(s) 210, 1419, 3283
HinP1I GCGC 3 cut(s) 210, 1419, 3283
HincII GTYRAC 1 cut(s) 1929
HindII GTYRAC 1 cut(s) 1929
HinfI GANTC 9 cut(s) 170, 1676, 1804, 2367, 2685, 2780, 3018, 3302, 3470
HpaII CCGG 5 cut(s) 687, 2764, 2796, 3375, 3541
Hpy166II GTNNAC 8 cut(s) 554, 692, 1929, 2116, 2609, 2864, 3203, 3549
Hpy8I GTNNAC 8 cut(s) 554, 692, 1929, 2116, 2609, 2864, 3203, 3549
HpyAV CCTTC 7 cut(s) 1562, 1954, 2101, 2461, 2492, 2812, 3412
HpyCH4IV ACGT 2 cut(s) 2871, 3478
HpySE526I ACGT 2 cut(s) 2871, 3478
Hsp92I GRCGYC 1 cut(s) 545
HspAI GCGC 3 cut(s) 210, 1419, 3283
Ksp22I TGATCA 3 cut(s) 234, 1473, 3624
Kzo9I GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
LmnI GCTCC 9 cut(s) 575, 814, 961, 1553, 1604, 2705, 2976, 3079, 3590
MaeI CTAG 7 cut(s) 1368, 1460, 1868, 2415, 2784, 2859, 3440
MaeII ACGT 2 cut(s) 2871, 3478
MaeIII GTNAC 6 cut(s) 73, 1703, 2316, 2999, 3312, 3335
MalI GATC 7 cut(s) 236, 1139, 1475, 1596, 2889, 3516, 3626
MbiI CCGCTC 1 cut(s) 1029
MboI GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
MfeI CAATTG 6 cut(s) 597, 2163, 2253, 2442, 2919, 3368
MflI RGATCY 1 cut(s) 1594
MhlI GDGCHC 3 cut(s) 369, 1514, 3460
MlyI GAGTC 4 cut(s) 1798, 2679, 2774, 3296
MmeI TCCRAC 4 cut(s) 1000, 1150, 2191, 2662
Mph1103I ATGCAT 3 cut(s) 797, 3311, 3496
MroXI GAANNNNTTC 5 cut(s) 527, 1121, 1680, 2366, 2731
MslI CAYNNNNRTG 3 cut(s) 790, 3213, 3672
MspI CCGG 5 cut(s) 687, 2764, 2796, 3375, 3541
MspR9I CCNGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
MunI CAATTG 6 cut(s) 597, 2163, 2253, 2442, 2919, 3368
Mva1269I GAATGC 1 cut(s) 1528
MvaI CCWGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
MvnI CGCG 1 cut(s) 845
NdeI CATATG 2 cut(s) 1723, 3121
NdeII GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
NlaIV GGNNCC 7 cut(s) 85, 1170, 1596, 3081, 3365, 3423, 3592
NmuCI GTSAC 3 cut(s) 73, 1703, 2999
NsiI ATGCAT 3 cut(s) 797, 3311, 3496
NspI RCATGY 3 cut(s) 3212, 3313, 3671
PagI TCATGA 2 cut(s) 519, 1960
PceI AGGCCT 1 cut(s) 1155
PciI ACATGT 1 cut(s) 3208
PctI GAATGC 1 cut(s) 1528
PdmI GAANNNNTTC 5 cut(s) 527, 1121, 1680, 2366, 2731
PfeI GAWTC 5 cut(s) 170, 1676, 2367, 3018, 3470
PfoI TCCNGGA 1 cut(s) 811
PinAI ACCGGT 1 cut(s) 3540
PleI GAGTC 4 cut(s) 1798, 2679, 2774, 3296
PpsI GAGTC 4 cut(s) 1798, 2679, 2774, 3296
PscI ACATGT 1 cut(s) 3208
PshAI GACNNNNGTC 1 cut(s) 2960
PshBI ATTAAT 2 cut(s) 188, 3264
PsiI TTATAA 1 cut(s) 1622
Psp6I CCWGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
PspFI CCCAGC 1 cut(s) 2258
PspGI CCWGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
PspN4I GGNNCC 7 cut(s) 85, 1170, 1596, 3081, 3365, 3423, 3592
PspPI GGNCC 4 cut(s) 1571, 2501, 3364, 3499
PsrI GAACNNNNNNTAC 2 cut(s) 2295, 2327
PstI CTGCAG 2 cut(s) 2644, 3169
PsuI RGATCY 1 cut(s) 1594
RsaI GTAC 8 cut(s) 141, 202, 693, 751, 1873, 2357, 2393, 2483
RsaNI GTAC 8 cut(s) 140, 201, 692, 750, 1872, 2356, 2392, 2482
RseI CAYNNNNRTG 3 cut(s) 790, 3213, 3672
Sau3AI GATC 7 cut(s) 234, 1137, 1473, 1594, 2887, 3514, 3624
Sau96I GGNCC 4 cut(s) 1571, 2501, 3364, 3499
SchI GAGTC 4 cut(s) 1798, 2679, 2774, 3296
ScrFI CCNGG 6 cut(s) 813, 1082, 1166, 1829, 2651, 3077
SduI GDGCHC 3 cut(s) 369, 1514, 3460
SfcI CTRYAG 6 cut(s) 1362, 1875, 2181, 2640, 3035, 3165
SinI GGWCC 3 cut(s) 1571, 3364, 3499
SmiMI CAYNNNNRTG 3 cut(s) 790, 3213, 3672
SmlI CTYRAG 2 cut(s) 1507, 2152
SmoI CTYRAG 2 cut(s) 1507, 2152
SseBI AGGCCT 1 cut(s) 1155
SsiI CCGC 9 cut(s) 821, 999, 1029, 1504, 1743, 1825, 1955, 2063, 3378
SspI AATATT 5 cut(s) 288, 1204, 1669, 2748, 3268
SspMI CTAG 7 cut(s) 1368, 1460, 1868, 2415, 2784, 2859, 3440
StuI AGGCCT 1 cut(s) 1155
StyD4I CCNGG 6 cut(s) 811, 1080, 1164, 1827, 2649, 3075
StyI CCWWGG 3 cut(s) 759, 973, 3278
TaiI ACGT 2 cut(s) 2874, 3481
TaqI TCGA 4 cut(s) 1796, 2089, 2954, 3021
TaqII GACCGA 1 cut(s) 3516
TatI WGTACW 4 cut(s) 691, 749, 2355, 2481
TauI GCSGC 3 cut(s) 824, 1827, 1957
TfiI GAWTC 5 cut(s) 170, 1676, 2367, 3018, 3470
TscAI CASTG 9 cut(s) 55, 78, 244, 334, 1299, 1863, 2377, 2583, 2964
TseFI GTSAC 3 cut(s) 73, 1703, 2999
Tsp45I GTSAC 3 cut(s) 73, 1703, 2999
TspGWI ACGGA 2 cut(s) 191, 1958
TspRI CASTG 9 cut(s) 55, 78, 244, 334, 1299, 1863, 2377, 2583, 2964
VpaK11BI GGWCC 3 cut(s) 1571, 3364, 3499
VspI ATTAAT 2 cut(s) 188, 3264
XagI CCTNNNNNAGG 1 cut(s) 2325
XapI RAATTY 8 cut(s) 13, 1274, 1392, 1432, 1975, 2831, 2877, 3239
XceI RCATGY 3 cut(s) 3212, 3313, 3671
XmiI GTMKAC 2 cut(s) 2608, 2863
XmnI GAANNNNTTC 5 cut(s) 527, 1121, 1680, 2366, 2731
XspI CTAG 7 cut(s) 1368, 1460, 1868, 2415, 2784, 2859, 3440
Zsp2I ATGCAT 3 cut(s) 797, 3311, 3496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.