Rw0G015530

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00713
Physical Location & Seq
Reverse (-)
34266 .. 39285
5020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G015530.1

Sequence Viewer

Length: 3555 bp
ATGAATATAGAAGTTATATATATGAATTTTGAACTGATGGTGTCTTGCTGGATGGTCACAGGGGAAAGACAAGCTGCAAGAATTAGAGGTTTGTATTTGAAAACAATATTGAGACAAGATGTTGCTTTCTTCGATATGGAAACAAACACTGGAGAGGTTGTTGGGAGAATGTCTGGTGACACTGTTCTCATTCAAGATGCCATGGGGGAGAAGGTTGGAAAATTCTTACAGCTGCTTGCAACATTCATTGGAGGGTTTATAATAGCATTCATCAAAGGGTGGCTTCTCACTCTTGTCATGCTATCCTCTATTCCTTTGCTTGTGGCATCTGGTGCAACGATGTCCATCATTATAACCAAGATGGCATCCCGTGGACAAACTGCTTACGCAAAAGCAGCAAATGTAGTTGAACAAACAATTGGGTCCATTAGAACCGTTGCATCATTTACTGGCGAGAGGGAAGCTATAACTAGTTATAACAAATATCTCGTAGATGCTTACAAATCAGGTGTTCATGAAGGTTCAGCTGCTGGAATAGGTCTTGGCTTGGTTATGTGTGTTGTGTTCAGCACATATGCCTTGGCTGTATGGTTTGGTTCAAAGATGATTAGGGAAAATGGATATACTGGGGGTGAAGTACTGAATGTGATTGTTGCTGTGTTGACTGGATCTATGTCTTTAGGGCAGACATCACCATGCATGAGTGCATTCGCTGCTGGTCAAGCTGCAGCTTATAAGATGTTTCAGACTATTAGTAGGAAGCCAGAGATAGATGCTTATGATGAAAGGGGAAAGACTTTGGGTGACATTTCGGGAGACATAGAGTTGAGAGATGTTTATTTCAGCTATCCAGCCAGACCGGATGAGCAAATATTTGACGGGTTCTCTCTTTGTATCCCTAGTGGCACAACTGCTGCTTTGGTTGGACAAAGTGGAAGTGGCAAGTCAACAGTCATCAGTCTGATAGAGAGATTTTATGATCCGCAAGCTGGTGAAGTTTTAATAGATGGCATAAACCTAAAAGAATTTCAACTTAAATGGATTCGGAGTAAAATTGGTCTTGTCAGTCAGGAACCTGTCCTGTTTGCATCCAGCATTAAGGAAAATATTGCCTATGGAAAGGATGGTGCTACCACTGAAGAGATACAAGCAGCAGCTGAGCTTGCAAATGCAGCTAAATTTGTTGACAAATTGCCTCAGGGCCTTGACAGCTTGGTCGGTGAGCATGGAACTCAGCTGTCTGGTGGGCAGAAGCAGAGAATTGCTATTGCAAGAGCAATTTTGAAAGACCCAAGGATTTTACTTCTGGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAGAGGGTAGTTCAAGAAGCATTGGATAGGATTATGGTTAACCGAACTACTGTTGTTGTCGCTCATCGTTTGAGTACAGTGAGGAATGCAGACATGATTGCTGTCATTCATAAAGGAAAGATGGTTGAAAAAGGTTCGCACTTGAATTTACTCAAAGATCCTGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAAAGAGTCAGAACAAACGTCAGAAGACCAAAACAAACCTGAAATAACTCTGGCATCTCTTAGACAGTCAAGTCAAAGAACATCAAGTCAAAGACTTTCGTTTGCACGATCCTTAAGTAGAAATTCCTCCGTAGGAAATAGCAGCCGTCACTCATATTCAGTGGCATTTGGTTTACCCACTGGACTTGGAGGCATTGGTGTCCAAGATGCTGCATATGAAGAAACAGAACTAGCACCAGAGCAACCTCCAAAGGTCTCACTCCGCCGCATTGCTGCCCTGAACAAACCTGAGATTCCAGTTCTTATTATTGGAACTATAGCTGCAATCATCAATGGTGTTATACTTCCAATATTCGGTGTGCTCATTTCCAGGGTTATAAAGACTTTCTATGAACCACCTCATCAACAGAAGAAAGATGCAGCATTTTGGGCAATAATTTTTATGATCCTTGGTCTGATATCATTCGTGGCGATCCCAGCACGAGGATATTTCTTTTCAGTAGCTGGCAGCAAGTTAATTCAGCGTATCAGATTATTGTGTTTTGAGAGAGTGGTTCACATGGAGGTTGGGTGGTTTGATGAGCCTGAGAACTCAAGTGGTGCAATTGGTGCAAGGCTCTCAGCAGATGCAGCGTCGGTGAGGGCCCTAGTCGGAGACGCTCTAGCTCAGATGGTTCAAAACATGGCAGCTGCAGTTGCAGGTTTGGTCATTGCTTATATCGCATGTTGGCAGCTGGCATTTATCATCCTCGCACTGCTTCCTCTCATTGCAGTTAACGGATATGTACAAATAAAGTTCATGAAAGGATTCAGCGCAGATGCAAAGATGATGTATGAGGAGGCAAGCCAAGTTGCTAATGACGCAGTTGGAAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTAATGGAACTATACAGAAGGAAATGTGAAGGCCCTATGAAGACAGGGATAAGACAAGGCTTGATCAGTGGTATAGGATTTGGGGTATCTTTCTTCTTTTTGTTTTGTGTCTACGCAACCAGTTTCTATGCTGGAGCTCAACTCGTGAAGGCTGGCAAAACAACATTTACAGACGTTTTCCAAGTTTTCTTTGCTCTGACCATGGCAGCTACCGGAATTTCTCAATCAAGCTCCGTTGGTCCCGATTCTGGTAAAGCCAAAACTTCTGCTGCTTCCATATTTGCAATAATAGACCGGCCATCAAAGATAGACCCAAGTAACGAGTCTGGTACGAAAATTGATGGTGGTGTGAAGGGAGAGATTGAGCTTCGCCATGTAAGCTTTAAGTATCCATCTAGGCCAGAAACACCTATTTTCCGAGACCTCAATTTAACTATCCGCTCTGGCAAGACGGTTGCCCTGGTCGGAGAAAGTGGGAGCGGAAAATCAACTGTTGTTGCATTGTTGCAAAGATTTTATGATCCGGATTCAGGTCATATCACACTTGATGGAATTGAACTTGGCAACTACAACTTGAAATGGTTGAGGCAGCAGATGGGACTCGTAAGCCAAGAACCTGTTTTATTTAATGACACCATTCGCGCCAACATTGCGTATGGAAAGGAAGAAACTGCAACTGAGGCAGAAATTATAGCTGCATCAGAGTTGGCCAATGCCCACAAGTTCATCAGTAGCCTACACCAGGGCTATGATACCGTAGTAGGAGAACGAGGAATCCAATTATCCGGGGGGCAGAAGCAACGTGTAGCCATTGCGCGTGCTATAATCAAGAGCCCCAAGATATTACTGTTGGATGAAGCTACGAGTGCACTTGATGCCGAATCTGAGAGAGTGGTTCAAGATGCATTAGACCGAGTCATGGTGAACCGGACAACAGTGGTGGTGGCTCATAGACTATCCACAATCAAGAATGCTGATGTGATTGCAGTGGTTAAAAATGGAGTTATAGTAGAGAAAGGGAAGCATGACAATTTGATTAATATCACCGATGGGTTTTATGCATCCCTAGTTGCTCTTCACATGAGCTCTTCAACTGCATGA

Protein Analysis

1184

Amino Acids

127.98

Weight (kDa)

7.23

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 12 - 225 6.3e-49 ABC transporter transmembrane region
ABC_tran PF00005 293 - 441 2.8e-33 ABC transporter
ABC_membrane PF00664 616 - 887 2.5e-59 ABC transporter transmembrane region
ABC_tran PF00005 958 - 1107 4.6e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 260, 353, 477, 735, 1922
AasI GACNNNNNNGTC 2 cut(s) 1214, 1614
Acc36I ACCTGC 1 cut(s) 2234
AccBSI CCGCTC 2 cut(s) 2895, 2934
AccI GTMKAC 1 cut(s) 2565
AccII CGCG 2 cut(s) 3096, 3271
AccIII TCCGGA 1 cut(s) 2977
AciI CCGC 5 cut(s) 983, 1807, 1810, 2893, 2934
AclWI GGATC 7 cut(s) 676, 974, 1493, 1647, 1984, 2011, 2969
AcoI YGGCCR 2 cut(s) 2750, 3162
AcsI RAATTY 7 cut(s) 25, 221, 1025, 1178, 1486, 1666, 2670
AcuI CTGAAG 2 cut(s) 1158, 2466
AfaI GTAC 4 cut(s) 639, 1417, 2331, 2785
AfiI CCNNNNNNNGG 7 cut(s) 989, 1898, 2027, 2702, 2984, 3196, 3373
AflII CTTAAG 1 cut(s) 1657
AflIII ACRYGT 1 cut(s) 3256
AhlI ACTAGT 1 cut(s) 470
AjnI CCWGG 3 cut(s) 1913, 2913, 3195
AjuI GAANNNNNNNTTGG 2 cut(s) 402, 434
AloI GAACNNNNNNTCC 2 cut(s) 3213, 3245
Alw21I GWGCWC 5 cut(s) 1327, 1908, 2593, 3325, 3542
Alw26I GTCTC 5 cut(s) 106, 810, 1804, 2193, 2868
Alw44I GTGCAC 2 cut(s) 1323, 3321
AlwI GGATC 7 cut(s) 676, 974, 1493, 1647, 1984, 2011, 2969
AlwNI CAGNNNCTG 4 cut(s) 530, 1157, 1340, 2048
Aor13HI TCCGGA 1 cut(s) 2977
AoxI GGCC 6 cut(s) 1201, 2187, 2485, 2750, 2852, 3162
ApaI GGGCCC 1 cut(s) 2191
ApaLI GTGCAC 2 cut(s) 1323, 3321
ApoI RAATTY 7 cut(s) 25, 221, 1025, 1178, 1486, 1666, 2670
AseI ATTAAT 1 cut(s) 3492
Asp700I GAANNNNTTC 1 cut(s) 2351
AspLEI GCGC 3 cut(s) 2360, 3098, 3271
AspS9I GGNCC 6 cut(s) 423, 1201, 2187, 2188, 2486, 2693
AsuC2I CCSGG 1 cut(s) 3241
AsuHPI GGTGA 9 cut(s) 188, 644, 684, 815, 1004, 1232, 2194, 3388, 3490
AvaII GGWCC 2 cut(s) 423, 2693
AxyI CCTNAGG 2 cut(s) 1197, 1503
BaeGI GKGCMC 3 cut(s) 1327, 2191, 3325
BaeI ACNNNNGTAYC 2 cut(s) 3198, 3231
BalI TGGCCA 1 cut(s) 3164
BanII GRGCYC 4 cut(s) 2191, 2593, 3290, 3542
BauI CACGAG 2 cut(s) 2025, 2597
BbsI GAAGAC 2 cut(s) 1575, 2501
Bbv12I GWGCWC 5 cut(s) 1327, 1908, 2593, 3325, 3542
BceAI ACGGC 1 cut(s) 1674
BciT130I CCWGG 3 cut(s) 1915, 2915, 3197
BciVI GTATCC 2 cut(s) 905, 2853
BclI TGATCA 1 cut(s) 2517
BcnI CCSGG 1 cut(s) 3241
BcoDI GTCTC 5 cut(s) 106, 810, 1804, 2193, 2868
BcuI ACTAGT 1 cut(s) 470
BfaI CTAG 7 cut(s) 471, 900, 1775, 2192, 2207, 2850, 3521
BfmI CTRYAG 3 cut(s) 726, 1860, 2235
BfrI CTTAAG 1 cut(s) 1657
BfuAI ACCTGC 1 cut(s) 2234
BfuI GTATCC 2 cut(s) 905, 2853
BlpI GCTNAGC 1 cut(s) 1158
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 4 cut(s) 1915, 2915, 3197, 3241
Bme18I GGWCC 2 cut(s) 423, 2693
BmgT120I GGNCC 6 cut(s) 423, 1201, 2187, 2188, 2486, 2693
BmiI GGNNCC 4 cut(s) 424, 1074, 2189, 2695
BmrFI CCNGG 4 cut(s) 1915, 2915, 3197, 3241
BmrI ACTGGG 1 cut(s) 636
BmuI ACTGGG 1 cut(s) 636
BpiI GAAGAC 2 cut(s) 1575, 2501
BplI GAGNNNNNCTC 2 cut(s) 2580, 2612
BpmI CTGGAG 2 cut(s) 171, 2607
Bpu1102I GCTNAGC 1 cut(s) 1158
BpuEI CTTGAG 1 cut(s) 2122
BpuMI CCSGG 1 cut(s) 3241
BsaBI GATNNNNATC 2 cut(s) 344, 3494
BsaI GGTCTC 2 cut(s) 1804, 2868
BsaWI WCCGGW 4 cut(s) 859, 2666, 2977, 3381
BsaXI ACNNNNNCTCC 6 cut(s) 144, 174, 2099, 2129, 3447, 3477
Bsc4I CCNNNNNNNGG 7 cut(s) 989, 1898, 2027, 2702, 2984, 3196, 3373
Bse118I RCCGGY 1 cut(s) 2748
Bse1I ACTGG 7 cut(s) 154, 454, 631, 670, 1729, 1841, 2574
Bse21I CCTNAGG 2 cut(s) 1197, 1503
Bse3DI GCAATG 5 cut(s) 1812, 2253, 2310, 3102, 3264
Bse8I GATNNNNATC 2 cut(s) 344, 3494
BseAI TCCGGA 1 cut(s) 2977
BseBI CCWGG 3 cut(s) 1915, 2915, 3197
BseGI GGATG 9 cut(s) 57, 365, 868, 1088, 1129, 1315, 2289, 3313, 3515
BseJI GATNNNNATC 2 cut(s) 344, 3494
BseLI CCNNNNNNNGG 7 cut(s) 989, 1898, 2027, 2702, 2984, 3196, 3373
BseMI GCAATG 5 cut(s) 1812, 2253, 2310, 3102, 3264
BseNI ACTGG 7 cut(s) 154, 454, 631, 670, 1729, 1841, 2574
BseRI GAGGAG 1 cut(s) 2396
BseSI GKGCMC 3 cut(s) 1327, 2191, 3325
BseYI CCCAGC 1 cut(s) 2020
Bsh1236I CGCG 2 cut(s) 3096, 3271
BshFI GGCC 6 cut(s) 1203, 2189, 2487, 2752, 2854, 3164
BsiHKAI GWGCWC 5 cut(s) 1327, 1908, 2593, 3325, 3542
BsiSI CCGG 6 cut(s) 860, 2667, 2749, 2978, 3240, 3382
BslFI GGGAC 2 cut(s) 2679, 3066
BslI CCNNNNNNNGG 7 cut(s) 989, 1898, 2027, 2702, 2984, 3196, 3373
BsmAI GTCTC 5 cut(s) 106, 810, 1804, 2193, 2868
BsmBI CGTCTC 1 cut(s) 2193
BsmFI GGGAC 2 cut(s) 2679, 3066
BsmI GAATGC 4 cut(s) 266, 707, 1432, 3430
BsnI GGCC 6 cut(s) 1203, 2189, 2487, 2752, 2854, 3164
Bso31I GGTCTC 2 cut(s) 1804, 2868
Bsp120I GGGCCC 1 cut(s) 2187
Bsp1286I GDGCHC 7 cut(s) 1327, 1908, 2191, 2593, 3290, 3325, 3542
Bsp13I TCCGGA 1 cut(s) 2977
Bsp1407I TGTACA 1 cut(s) 2329
Bsp143I GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
Bsp1720I GCTNAGC 1 cut(s) 1158
Bsp19I CCATGG 2 cut(s) 201, 2655
BspACI CCGC 5 cut(s) 983, 1807, 1810, 2893, 2934
BspANI GGCC 6 cut(s) 1203, 2189, 2487, 2752, 2854, 3164
BspEI TCCGGA 1 cut(s) 2977
BspFNI CGCG 2 cut(s) 3096, 3271
BspHI TCATGA 2 cut(s) 514, 2343
BspLI GGNNCC 4 cut(s) 424, 1074, 2189, 2695
BspMAI CTGCAG 2 cut(s) 730, 2239
BspMI ACCTGC 1 cut(s) 2234
BspPI GGATC 7 cut(s) 676, 974, 1493, 1647, 1984, 2011, 2969
BspQI GCTCTTC 2 cut(s) 3534, 3547
BspTI CTTAAG 1 cut(s) 1657
BspTNI GGTCTC 2 cut(s) 1804, 2868
BsrBI CCGCTC 2 cut(s) 2895, 2934
BsrDI GCAATG 5 cut(s) 1812, 2253, 2310, 3102, 3264
BsrFI RCCGGY 1 cut(s) 2748
BsrGI TGTACA 1 cut(s) 2329
BsrI ACTGG 7 cut(s) 154, 454, 631, 670, 1729, 1841, 2574
BssAI RCCGGY 1 cut(s) 2748
BssMI GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
BssSI CACGAG 2 cut(s) 2025, 2597
BssT1I CCWWGG 5 cut(s) 201, 579, 1292, 1993, 2655
Bst2BI CACGAG 2 cut(s) 2025, 2597
Bst2UI CCWGG 3 cut(s) 1915, 2915, 3197
Bst6I CTCTTC 4 cut(s) 1134, 2442, 3534, 3547
BstAFI CTTAAG 1 cut(s) 1657
BstAPI GCANNNNNTGC 5 cut(s) 332, 713, 1331, 2153, 3329
BstAUI TGTACA 1 cut(s) 2329
BstC8I GCNNGC 9 cut(s) 237, 987, 1164, 1532, 2050, 2280, 2389, 2608, 3273
BstDSI CCRYGG 3 cut(s) 201, 370, 2655
BstENI CCTNNNNNAGG 1 cut(s) 3194
BstF5I GGATG 9 cut(s) 57, 365, 868, 1088, 1129, 1315, 2289, 3313, 3515
BstFNI CGCG 2 cut(s) 3096, 3271
BstHHI GCGC 3 cut(s) 2360, 3098, 3271
BstKTI GATC 8 cut(s) 671, 982, 1501, 1655, 1992, 2019, 2520, 2977
BstMAI GTCTC 5 cut(s) 106, 810, 1804, 2193, 2868
BstMBI GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
BstNI CCWGG 3 cut(s) 1915, 2915, 3197
BstNSI RCATGY 1 cut(s) 2271
BstSCI CCNGG 4 cut(s) 1913, 2913, 3195, 3239
BstSFI CTRYAG 3 cut(s) 726, 1860, 2235
BstSLI GKGCMC 3 cut(s) 1327, 2191, 3325
BstUI CGCG 2 cut(s) 3096, 3271
BstV2I GAAGAC 2 cut(s) 1575, 2501
BstX2I RGATCY 2 cut(s) 668, 1498
BstYI RGATCY 2 cut(s) 668, 1498
Bsu36I CCTNAGG 2 cut(s) 1197, 1503
BsuI GTATCC 2 cut(s) 905, 2853
BsuRI GGCC 6 cut(s) 1203, 2189, 2487, 2752, 2854, 3164
BtgI CCRYGG 3 cut(s) 201, 370, 2655
BtsCI GGATG 9 cut(s) 57, 365, 868, 1088, 1129, 1315, 2289, 3313, 3515
BtsI GCAGTG 2 cut(s) 2297, 3447
BveI ACCTGC 1 cut(s) 2234
Cac8I GCNNGC 9 cut(s) 237, 987, 1164, 1532, 2050, 2280, 2389, 2608, 3273
CaiI CAGNNNCTG 4 cut(s) 530, 1157, 1340, 2048
CciI TCATGA 2 cut(s) 514, 2343
CfoI GCGC 3 cut(s) 2360, 3098, 3271
Cfr10I RCCGGY 1 cut(s) 2748
Cfr13I GGNCC 6 cut(s) 423, 1201, 2187, 2188, 2486, 2693
CseI GACGC 3 cut(s) 2166, 2210, 2414
Csp6I GTAC 4 cut(s) 638, 1416, 2330, 2784
CspCI CAANNNNNGTGG 4 cut(s) 1711, 1746, 3375, 3410
CviQI GTAC 4 cut(s) 638, 1416, 2330, 2784
DpnI GATC 8 cut(s) 670, 981, 1500, 1654, 1991, 2018, 2519, 2976
DpnII GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
DrdI GACNNNNNNGTC 2 cut(s) 1214, 1614
DseDI GACNNNNNNGTC 2 cut(s) 1214, 1614
EaeI YGGCCR 2 cut(s) 2750, 3162
Eam1104I CTCTTC 4 cut(s) 1134, 2442, 3534, 3547
EarI CTCTTC 4 cut(s) 1134, 2442, 3534, 3547
EciI GGCGGA 1 cut(s) 1796
Ecl136II GAGCTC 2 cut(s) 2591, 3540
Eco130I CCWWGG 5 cut(s) 201, 579, 1292, 1993, 2655
Eco24I GRGCYC 4 cut(s) 2191, 2593, 3290, 3542
Eco31I GGTCTC 2 cut(s) 1804, 2868
Eco32I GATATC 1 cut(s) 2004
Eco47I GGWCC 2 cut(s) 423, 2693
Eco53kI GAGCTC 2 cut(s) 2591, 3540
Eco57I CTGAAG 2 cut(s) 1158, 2466
Eco81I CCTNAGG 2 cut(s) 1197, 1503
EcoICRI GAGCTC 2 cut(s) 2591, 3540
EcoNI CCTNNNNNAGG 1 cut(s) 3194
EcoO109I RGGNCCY 4 cut(s) 1201, 2187, 2188, 2486
EcoRII CCWGG 3 cut(s) 1913, 2913, 3195
EcoRV GATATC 1 cut(s) 2004
EcoT14I CCWWGG 5 cut(s) 201, 579, 1292, 1993, 2655
EcoT22I ATGCAT 3 cut(s) 701, 3361, 3517
EcoT38I GRGCYC 4 cut(s) 2191, 2593, 3290, 3542
ErhI CCWWGG 5 cut(s) 201, 579, 1292, 1993, 2655
Esp3I CGTCTC 1 cut(s) 2193
FalI AAGNNNNNCTT 2 cut(s) 267, 299
FaqI GGGAC 2 cut(s) 2679, 3066
FauNDI CATATG 2 cut(s) 574, 1759
FbaI TGATCA 1 cut(s) 2517
FblI GTMKAC 1 cut(s) 2565
FokI GGATG 9 cut(s) 64, 352, 875, 1075, 1136, 1322, 2276, 3320, 3502
FriOI GRGCYC 4 cut(s) 2191, 2593, 3290, 3542
FspBI CTAG 7 cut(s) 471, 900, 1775, 2192, 2207, 2850, 3521
GlaI GCGC 3 cut(s) 2359, 3097, 3270
GsaI CCCAGC 1 cut(s) 2024
GsuI CTGGAG 2 cut(s) 171, 2607
HaeIII GGCC 6 cut(s) 1203, 2189, 2487, 2752, 2854, 3164
HapII CCGG 6 cut(s) 860, 2667, 2749, 2978, 3240, 3382
HgaI GACGC 3 cut(s) 2166, 2210, 2414
HhaI GCGC 3 cut(s) 2360, 3098, 3271
Hin6I GCGC 3 cut(s) 2358, 3096, 3269
HinP1I GCGC 3 cut(s) 2358, 3096, 3269
HincII GTYRAC 5 cut(s) 663, 948, 1186, 1381, 2320
HindII GTYRAC 5 cut(s) 663, 948, 1186, 1381, 2320
HindIII AAGCTT 1 cut(s) 2833
HpaI GTTAAC 2 cut(s) 1381, 2320
HpaII CCGG 6 cut(s) 860, 2667, 2749, 2978, 3240, 3382
HphI GGTGA 9 cut(s) 188, 644, 684, 815, 1004, 1232, 2194, 3388, 3490
Hpy99I CGWCG 1 cut(s) 2182
HpyAV CCTTC 7 cut(s) 205, 512, 2446, 2466, 2477, 2596, 2800
HpyCH4IV ACGT 3 cut(s) 1562, 2628, 3256
HpySE526I ACGT 3 cut(s) 1562, 2628, 3256
HspAI GCGC 3 cut(s) 2358, 3096, 3269
Kpn2I TCCGGA 1 cut(s) 2977
Ksp22I TGATCA 1 cut(s) 2517
KspAI GTTAAC 2 cut(s) 1381, 2320
Kzo9I GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
LguI GCTCTTC 2 cut(s) 3534, 3547
LmnI GCTCC 4 cut(s) 1508, 2588, 2690, 2931
MaeI CTAG 7 cut(s) 471, 900, 1775, 2192, 2207, 2850, 3521
MaeII ACGT 3 cut(s) 1562, 2628, 3256
MaeIII GTNAC 5 cut(s) 55, 176, 803, 1691, 2771
MalI GATC 8 cut(s) 670, 981, 1500, 1654, 1991, 2018, 2519, 2976
MbiI CCGCTC 2 cut(s) 2895, 2934
MboI GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
MfeI CAATTG 2 cut(s) 417, 2148
MflI RGATCY 2 cut(s) 668, 1498
MhlI GDGCHC 7 cut(s) 1327, 1908, 2191, 2593, 3290, 3325, 3542
MlsI TGGCCA 1 cut(s) 3164
MluNI TGGCCA 1 cut(s) 3164
MlyI GAGTC 4 cut(s) 1559, 2786, 3048, 3378
MmeI TCCRAC 6 cut(s) 196, 904, 2176, 2392, 2899, 3285
Mox20I TGGCCA 1 cut(s) 3164
Mph1103I ATGCAT 3 cut(s) 701, 3361, 3517
MroI TCCGGA 1 cut(s) 2977
MroXI GAANNNNTTC 1 cut(s) 2351
MscI TGGCCA 1 cut(s) 3164
MslI CAYNNNNRTG 1 cut(s) 694
Msp20I TGGCCA 1 cut(s) 3164
MspA1I CMGCKG 6 cut(s) 232, 527, 1157, 1237, 2234, 2278
MspCI CTTAAG 1 cut(s) 1657
MspI CCGG 6 cut(s) 860, 2667, 2749, 2978, 3240, 3382
MspR9I CCNGG 4 cut(s) 1915, 2915, 3197, 3241
MunI CAATTG 2 cut(s) 417, 2148
Mva1269I GAATGC 4 cut(s) 266, 707, 1432, 3430
MvaI CCWGG 3 cut(s) 1915, 2915, 3197
MvnI CGCG 2 cut(s) 3096, 3271
NciI CCSGG 1 cut(s) 3241
NcoI CCATGG 2 cut(s) 201, 2655
NdeI CATATG 2 cut(s) 574, 1759
NdeII GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
NlaIV GGNNCC 4 cut(s) 424, 1074, 2189, 2695
NmuCI GTSAC 4 cut(s) 55, 176, 803, 1691
NsiI ATGCAT 3 cut(s) 701, 3361, 3517
NspI RCATGY 1 cut(s) 2271
PagI TCATGA 2 cut(s) 514, 2343
PciSI GCTCTTC 2 cut(s) 3534, 3547
PctI GAATGC 4 cut(s) 266, 707, 1432, 3430
PdmI GAANNNNTTC 1 cut(s) 2351
PfeI GAWTC 8 cut(s) 1042, 1337, 1837, 2352, 2699, 2981, 3228, 3335
PflFI GACNNNGTC 1 cut(s) 3368
PleI GAGTC 4 cut(s) 1558, 2785, 3048, 3377
PpsI GAGTC 4 cut(s) 1558, 2785, 3048, 3377
PshBI ATTAAT 1 cut(s) 3492
PsiI TTATAA 5 cut(s) 260, 353, 477, 735, 1922
Psp124BI GAGCTC 2 cut(s) 2593, 3542
Psp6I CCWGG 3 cut(s) 1913, 2913, 3195
PspFI CCCAGC 1 cut(s) 2020
PspGI CCWGG 3 cut(s) 1913, 2913, 3195
PspN4I GGNNCC 4 cut(s) 424, 1074, 2189, 2695
PspOMI GGGCCC 1 cut(s) 2187
PspPI GGNCC 6 cut(s) 423, 1201, 2187, 2188, 2486, 2693
PstI CTGCAG 2 cut(s) 730, 2239
PstNI CAGNNNCTG 4 cut(s) 530, 1157, 1340, 2048
PsuI RGATCY 2 cut(s) 668, 1498
PsyI GACNNNGTC 1 cut(s) 3368
PvuII CAGCTG 6 cut(s) 232, 527, 1157, 1237, 2234, 2278
RsaI GTAC 4 cut(s) 639, 1417, 2331, 2785
RsaNI GTAC 4 cut(s) 638, 1416, 2330, 2784
RseI CAYNNNNRTG 1 cut(s) 694
SacI GAGCTC 2 cut(s) 2593, 3542
SapI GCTCTTC 2 cut(s) 3534, 3547
Sau3AI GATC 8 cut(s) 668, 979, 1498, 1652, 1989, 2016, 2517, 2974
Sau96I GGNCC 6 cut(s) 423, 1201, 2187, 2188, 2486, 2693
ScaI AGTACT 1 cut(s) 639
SchI GAGTC 4 cut(s) 1559, 2786, 3048, 3378
ScrFI CCNGG 4 cut(s) 1915, 2915, 3197, 3241
SduI GDGCHC 7 cut(s) 1327, 1908, 2191, 2593, 3290, 3325, 3542
SfcI CTRYAG 3 cut(s) 726, 1860, 2235
SinI GGWCC 2 cut(s) 423, 2693
SmiMI CAYNNNNRTG 1 cut(s) 694
SmlI CTYRAG 2 cut(s) 1657, 2137
SmoI CTYRAG 2 cut(s) 1657, 2137
SpeI ACTAGT 1 cut(s) 470
SsiI CCGC 5 cut(s) 983, 1807, 1810, 2893, 2934
SspI AATATT 4 cut(s) 108, 873, 1108, 1896
SspMI CTAG 7 cut(s) 471, 900, 1775, 2192, 2207, 2850, 3521
SstI GAGCTC 2 cut(s) 2593, 3542
StyD4I CCNGG 4 cut(s) 1913, 2913, 3195, 3239
StyI CCWWGG 5 cut(s) 201, 579, 1292, 1993, 2655
TaiI ACGT 3 cut(s) 1565, 2631, 3259
TaqI TCGA 1 cut(s) 132
TaqII GACCGA 1 cut(s) 3381
TatI WGTACW 3 cut(s) 637, 1415, 2329
TauI GCSGC 1 cut(s) 1812
TfiI GAWTC 8 cut(s) 1042, 1337, 1837, 2352, 2699, 2981, 3228, 3335
TseFI GTSAC 4 cut(s) 55, 176, 803, 1691
Tsp45I GTSAC 4 cut(s) 55, 176, 803, 1691
TspGWI ACGGA 3 cut(s) 1663, 2337, 2677
Tth111I GACNNNGTC 1 cut(s) 3368
Vha464I CTTAAG 1 cut(s) 1657
VneI GTGCAC 2 cut(s) 1323, 3321
VpaK11BI GGWCC 2 cut(s) 423, 2693
VspI ATTAAT 1 cut(s) 3492
XagI CCTNNNNNAGG 1 cut(s) 3194
XapI RAATTY 7 cut(s) 25, 221, 1025, 1178, 1486, 1666, 2670
XceI RCATGY 1 cut(s) 2271
XmiI GTMKAC 1 cut(s) 2565
XmnI GAANNNNTTC 1 cut(s) 2351
XspI CTAG 7 cut(s) 471, 900, 1775, 2192, 2207, 2850, 3521
ZrmI AGTACT 1 cut(s) 639
Zsp2I ATGCAT 3 cut(s) 701, 3361, 3517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.