ABC transporter B family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 17 - 105 | 7.1e-17 | ABC transporter transmembrane region |
| ABC_membrane | PF00664 | 115 - 241 | 6.5e-18 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 287 - 435 | 2.1e-32 | ABC transporter |
| ABC_membrane | PF00664 | 582 - 855 | 3.5e-53 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 923 - 1072 | 3.9e-31 | ABC transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1508 |
| AatII | GACGTC | 1 cut(s) | 3657 |
| Acc36I | ACCTGC | 1 cut(s) | 1944 |
| AccB1I | GGYRCC | 1 cut(s) | 3181 |
| AccBSI | CCGCTC | 1 cut(s) | 915 |
| AccI | GTMKAC | 2 cut(s) | 2491, 2746 |
| AciI | CCGC | 8 cut(s) | 885, 915, 1390, 1626, 1838, 1946, 3138, 3451 |
| AclWI | GGATC | 6 cut(s) | 1031, 1475, 1488, 3282, 3374, 3387 |
| AcsI | RAATTY | 7 cut(s) | 13, 1160, 1278, 1318, 1858, 2714, 2760 |
| AcuI | CTGAAG | 3 cut(s) | 107, 1140, 1286 |
| AcyI | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| AfaI | GTAC | 6 cut(s) | 561, 619, 1756, 2240, 2276, 2366 |
| AfeI | AGCGCT | 1 cut(s) | 1306 |
| AflIII | ACRYGT | 1 cut(s) | 3238 |
| AgeI | ACCGGT | 1 cut(s) | 3300 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2787 |
| AjiI | CACGTC | 2 cut(s) | 730, 2755 |
| AjnI | CCWGG | 5 cut(s) | 966, 1050, 1710, 2532, 2958 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 450, 482 |
| Alw21I | GWGCWC | 3 cut(s) | 285, 1400, 3220 |
| Alw26I | GTCTC | 6 cut(s) | 157, 792, 1702, 2851, 2929, 3390 |
| AlwI | GGATC | 6 cut(s) | 1031, 1475, 1488, 3282, 3374, 3387 |
| Aor51HI | AGCGCT | 1 cut(s) | 1306 |
| AoxI | GGCC | 2 cut(s) | 1039, 2383 |
| ApoI | RAATTY | 7 cut(s) | 13, 1160, 1278, 1318, 1858, 2714, 2760 |
| AsiGI | ACCGGT | 1 cut(s) | 3300 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 395, 1007, 1566, 2249, 2614, 3373 |
| AspLEI | GCGC | 1 cut(s) | 1307 |
| AspS9I | GGNCC | 4 cut(s) | 1457, 2384, 3124, 3259 |
| AsuC2I | CCSGG | 1 cut(s) | 3465 |
| AsuII | TTCGAA | 1 cut(s) | 3498 |
| AvaII | GGWCC | 3 cut(s) | 1457, 3124, 3259 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1182, 1215, 1746, 1779 |
| BamHI | GGATCC | 2 cut(s) | 1480, 3379 |
| BanI | GGYRCC | 1 cut(s) | 3181 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 80, 112, 1982, 2014 |
| BbsI | GAAGAC | 2 cut(s) | 364, 2804 |
| Bbv12I | GWGCWC | 3 cut(s) | 285, 1400, 3220 |
| BbvCI | CCTCAGC | 1 cut(s) | 6 |
| BccI | CCATC | 8 cut(s) | 317, 983, 1100, 1481, 1684, 2350, 2891, 3380 |
| BceAI | ACGGC | 2 cut(s) | 3415, 3575 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1962, 1996, 3419, 3453 |
| BciT130I | CCWGG | 5 cut(s) | 968, 1052, 1712, 2534, 2960 |
| BciVI | GTATCC | 1 cut(s) | 2748 |
| BclI | TGATCA | 2 cut(s) | 150, 1359 |
| BcnI | CCSGG | 1 cut(s) | 3465 |
| BcoDI | GTCTC | 6 cut(s) | 157, 792, 1702, 2851, 2929, 3390 |
| BfaI | CTAG | 8 cut(s) | 1254, 1346, 1751, 2298, 2588, 2667, 2742, 3200 |
| BfmI | CTRYAG | 8 cut(s) | 120, 131, 1248, 1758, 2064, 2523, 2918, 3048 |
| BfoI | RGCGCY | 1 cut(s) | 1308 |
| BfuAI | ACCTGC | 1 cut(s) | 1944 |
| BfuI | GTATCC | 1 cut(s) | 2748 |
| BlpI | GCTNAGC | 1 cut(s) | 1140 |
| Bme1390I | CCNGG | 6 cut(s) | 968, 1052, 1712, 2534, 2960, 3465 |
| Bme18I | GGWCC | 3 cut(s) | 1457, 3124, 3259 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2787 |
| BmgBI | CACGTC | 2 cut(s) | 730, 2755 |
| BmgT120I | GGNCC | 4 cut(s) | 1457, 2384, 3124, 3259 |
| BmiI | GGNNCC | 7 cut(s) | 1056, 1482, 2964, 3125, 3183, 3352, 3381 |
| BmrFI | CCNGG | 6 cut(s) | 968, 1052, 1712, 2534, 2960, 3465 |
| BmrI | ACTGGG | 2 cut(s) | 1190, 2569 |
| BmuI | ACTGGG | 2 cut(s) | 1190, 2569 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2843 |
| BpiI | GAAGAC | 2 cut(s) | 364, 2804 |
| BpmI | CTGGAG | 5 cut(s) | 177, 1245, 1674, 2840, 3132 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1140 |
| Bpu14I | TTCGAA | 1 cut(s) | 3498 |
| BpuEI | CTTGAG | 2 cut(s) | 1414, 2020 |
| BpuMI | CCSGG | 1 cut(s) | 3465 |
| BsaHI | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| BsaI | GGTCTC | 1 cut(s) | 2851 |
| BsaJI | CCNNGG | 5 cut(s) | 418, 627, 859, 966, 3027 |
| BsaWI | WCCGGW | 2 cut(s) | 2646, 3300 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 435, 465, 669, 699, 1431, 1461, 2954, 2984 |
| Bse118I | RCCGGY | 1 cut(s) | 3300 |
| Bse1I | ACTGG | 9 cut(s) | 160, 1058, 1185, 1549, 1739, 2236, 2575, 3070, 3115 |
| Bse3DI | GCAATG | 5 cut(s) | 303, 1419, 1983, 2997, 3354 |
| BseBI | CCWGG | 5 cut(s) | 968, 1052, 1712, 2534, 2960 |
| BseDI | CCNNGG | 5 cut(s) | 418, 627, 859, 966, 3027 |
| BseGI | GGATG | 9 cut(s) | 153, 270, 285, 328, 820, 1111, 2151, 2558, 2902 |
| BseMI | GCAATG | 5 cut(s) | 303, 1419, 1983, 2997, 3354 |
| BseNI | ACTGG | 9 cut(s) | 160, 1058, 1185, 1549, 1739, 2236, 2575, 3070, 3115 |
| BseRI | GAGGAG | 4 cut(s) | 23, 456, 693, 860 |
| BseYI | CCCAGC | 1 cut(s) | 2141 |
| BsgI | GTGCAG | 3 cut(s) | 1355, 2277, 3342 |
| BshFI | GGCC | 2 cut(s) | 1041, 2385 |
| BshNI | GGYRCC | 1 cut(s) | 3181 |
| BshTI | ACCGGT | 1 cut(s) | 3300 |
| BsiHKAI | GWGCWC | 3 cut(s) | 285, 1400, 3220 |
| BsiSI | CCGG | 4 cut(s) | 2647, 2679, 3301, 3465 |
| BslFI | GGGAC | 1 cut(s) | 1699 |
| BsmAI | GTCTC | 6 cut(s) | 157, 792, 1702, 2851, 2929, 3390 |
| BsmBI | CGTCTC | 1 cut(s) | 3390 |
| BsmFI | GGGAC | 1 cut(s) | 1699 |
| BsmI | GAATGC | 2 cut(s) | 413, 1414 |
| BsnI | GGCC | 2 cut(s) | 1041, 2385 |
| Bso31I | GGTCTC | 1 cut(s) | 2851 |
| Bsp119I | TTCGAA | 1 cut(s) | 3498 |
| Bsp1286I | GDGCHC | 3 cut(s) | 285, 1400, 3220 |
| Bsp1407I | TGTACA | 2 cut(s) | 559, 2364 |
| Bsp143I | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1140 |
| BspACI | CCGC | 8 cut(s) | 885, 915, 1390, 1626, 1838, 1946, 3138, 3451 |
| BspANI | GGCC | 2 cut(s) | 1041, 2385 |
| BspHI | TCATGA | 3 cut(s) | 387, 687, 1843 |
| BspLI | GGNNCC | 7 cut(s) | 1056, 1482, 2964, 3125, 3183, 3352, 3381 |
| BspMAI | CTGCAG | 4 cut(s) | 124, 135, 2527, 3052 |
| BspMI | ACCTGC | 1 cut(s) | 1944 |
| BspPI | GGATC | 6 cut(s) | 1031, 1475, 1488, 3282, 3374, 3387 |
| BspQI | GCTCTTC | 1 cut(s) | 3225 |
| BspT104I | TTCGAA | 1 cut(s) | 3498 |
| BspT107I | GGYRCC | 1 cut(s) | 3181 |
| BspTNI | GGTCTC | 1 cut(s) | 2851 |
| BsrBI | CCGCTC | 1 cut(s) | 915 |
| BsrDI | GCAATG | 5 cut(s) | 303, 1419, 1983, 2997, 3354 |
| BsrFI | RCCGGY | 1 cut(s) | 3300 |
| BsrGI | TGTACA | 2 cut(s) | 559, 2364 |
| BsrI | ACTGG | 9 cut(s) | 160, 1058, 1185, 1549, 1739, 2236, 2575, 3070, 3115 |
| BssAI | RCCGGY | 1 cut(s) | 3300 |
| BssECI | CCNNGG | 5 cut(s) | 418, 627, 859, 966, 3027 |
| BssMI | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| BssNI | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| BssT1I | CCWWGG | 2 cut(s) | 627, 859 |
| Bst2UI | CCWGG | 5 cut(s) | 968, 1052, 1712, 2534, 2960 |
| Bst6I | CTCTTC | 2 cut(s) | 1707, 3225 |
| BstACI | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 896 |
| BstAUI | TGTACA | 2 cut(s) | 559, 2364 |
| BstBI | TTCGAA | 1 cut(s) | 3498 |
| BstC8I | GCNNGC | 7 cut(s) | 347, 510, 1146, 1624, 2287, 2506, 3067 |
| BstDSI | CCRYGG | 1 cut(s) | 418 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2208 |
| BstF5I | GGATG | 9 cut(s) | 153, 270, 285, 328, 820, 1111, 2151, 2558, 2902 |
| BstH2I | RGCGCY | 1 cut(s) | 1308 |
| BstHHI | GCGC | 1 cut(s) | 1307 |
| BstKTI | GATC | 8 cut(s) | 153, 1026, 1362, 1483, 2773, 3277, 3382, 3479 |
| BstMAI | GTCTC | 6 cut(s) | 157, 792, 1702, 2851, 2929, 3390 |
| BstMBI | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| BstNI | CCWGG | 5 cut(s) | 968, 1052, 1712, 2534, 2960 |
| BstNSI | RCATGY | 1 cut(s) | 349 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2843 |
| BstSCI | CCNGG | 6 cut(s) | 966, 1050, 1710, 2532, 2958, 3463 |
| BstSFI | CTRYAG | 8 cut(s) | 120, 131, 1248, 1758, 2064, 2523, 2918, 3048 |
| BstV2I | GAAGAC | 2 cut(s) | 364, 2804 |
| BstX2I | RGATCY | 2 cut(s) | 1480, 3379 |
| BstYI | RGATCY | 2 cut(s) | 1480, 3379 |
| BsuI | GTATCC | 1 cut(s) | 2748 |
| BsuRI | GGCC | 2 cut(s) | 1041, 2385 |
| BtgI | CCRYGG | 1 cut(s) | 418 |
| BtgZI | GCGATG | 1 cut(s) | 3534 |
| BtrI | CACGTC | 2 cut(s) | 730, 2755 |
| BtsCI | GGATG | 9 cut(s) | 153, 270, 285, 328, 820, 1111, 2151, 2558, 2902 |
| BtsI | GCAGTG | 2 cut(s) | 48, 78 |
| BveI | ACCTGC | 1 cut(s) | 1944 |
| Cac8I | GCNNGC | 7 cut(s) | 347, 510, 1146, 1624, 2287, 2506, 3067 |
| CciI | TCATGA | 3 cut(s) | 387, 687, 1843 |
| CfoI | GCGC | 1 cut(s) | 1307 |
| Cfr10I | RCCGGY | 1 cut(s) | 3300 |
| Cfr13I | GGNCC | 4 cut(s) | 1457, 2384, 3124, 3259 |
| CseI | GACGC | 8 cut(s) | 1322, 2291, 3434, 3443, 3501, 3548, 3551, 3593 |
| Csp6I | GTAC | 6 cut(s) | 560, 618, 1755, 2239, 2275, 2365 |
| CspAI | ACCGGT | 1 cut(s) | 3300 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3270, 3305 |
| CviQI | GTAC | 6 cut(s) | 560, 618, 1755, 2239, 2275, 2365 |
| DpnI | GATC | 8 cut(s) | 152, 1025, 1361, 1482, 2772, 3276, 3381, 3478 |
| DpnII | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| DraI | TTTAAA | 1 cut(s) | 783 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2787 |
| Eam1104I | CTCTTC | 2 cut(s) | 1707, 3225 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2787 |
| EarI | CTCTTC | 2 cut(s) | 1707, 3225 |
| Eco130I | CCWWGG | 2 cut(s) | 627, 859 |
| Eco147I | AGGCCT | 1 cut(s) | 1041 |
| Eco31I | GGTCTC | 1 cut(s) | 2851 |
| Eco47I | GGWCC | 3 cut(s) | 1457, 3124, 3259 |
| Eco47III | AGCGCT | 1 cut(s) | 1306 |
| Eco57I | CTGAAG | 3 cut(s) | 107, 1140, 1286 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2208 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2384 |
| EcoRI | GAATTC | 2 cut(s) | 13, 1858 |
| EcoRII | CCWGG | 5 cut(s) | 966, 1050, 1710, 2532, 2958 |
| EcoT14I | CCWWGG | 2 cut(s) | 627, 859 |
| EcoT22I | ATGCAT | 2 cut(s) | 347, 3256 |
| ErhI | CCWWGG | 2 cut(s) | 627, 859 |
| Esp3I | CGTCTC | 1 cut(s) | 3390 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1686, 1718, 1814, 1846 |
| FaqI | GGGAC | 1 cut(s) | 1699 |
| FauI | CCCGC | 1 cut(s) | 1939 |
| FauNDI | CATATG | 2 cut(s) | 1606, 3004 |
| FbaI | TGATCA | 2 cut(s) | 150, 1359 |
| FblI | GTMKAC | 2 cut(s) | 2491, 2746 |
| FokI | GGATG | 9 cut(s) | 160, 272, 277, 335, 827, 1118, 2158, 2545, 2909 |
| FspBI | CTAG | 8 cut(s) | 1254, 1346, 1751, 2298, 2588, 2667, 2742, 3200 |
| GlaI | GCGC | 1 cut(s) | 1306 |
| GsaI | CCCAGC | 1 cut(s) | 2145 |
| GsuI | CTGGAG | 5 cut(s) | 177, 1245, 1674, 2840, 3132 |
| HaeII | RGCGCY | 1 cut(s) | 1308 |
| HaeIII | GGCC | 2 cut(s) | 1041, 2385 |
| HapII | CCGG | 4 cut(s) | 2647, 2679, 3301, 3465 |
| HgaI | GACGC | 8 cut(s) | 1322, 2291, 3434, 3443, 3501, 3548, 3551, 3593 |
| HhaI | GCGC | 1 cut(s) | 1307 |
| Hin1I | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| Hin6I | GCGC | 1 cut(s) | 1305 |
| HinP1I | GCGC | 1 cut(s) | 1305 |
| HincII | GTYRAC | 2 cut(s) | 1812, 3630 |
| HindII | GTYRAC | 2 cut(s) | 1812, 3630 |
| HinfI | GANTC | 7 cut(s) | 1562, 1687, 2250, 2568, 2663, 2901, 3230 |
| HpaII | CCGG | 4 cut(s) | 2647, 2679, 3301, 3465 |
| Hpy99I | CGWCG | 8 cut(s) | 3395, 3434, 3437, 3495, 3609, 3645, 3656, 3659 |
| HpyAV | CCTTC | 6 cut(s) | 1448, 1837, 1984, 2375, 2695, 3172 |
| HpyCH4IV | ACGT | 7 cut(s) | 729, 2754, 3238, 3626, 3640, 3654, 3685 |
| HpySE526I | ACGT | 7 cut(s) | 729, 2754, 3238, 3626, 3640, 3654, 3685 |
| Hsp92I | GRCGYC | 3 cut(s) | 3426, 3562, 3654 |
| HspAI | GCGC | 1 cut(s) | 1305 |
| Ksp22I | TGATCA | 2 cut(s) | 150, 1359 |
| Kzo9I | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| LguI | GCTCTTC | 1 cut(s) | 3225 |
| MaeI | CTAG | 8 cut(s) | 1254, 1346, 1751, 2298, 2588, 2667, 2742, 3200 |
| MaeII | ACGT | 7 cut(s) | 729, 2754, 3238, 3626, 3640, 3654, 3685 |
| MaeIII | GTNAC | 8 cut(s) | 73, 1586, 2199, 2422, 2548, 2882, 3095, 3422 |
| MalI | GATC | 8 cut(s) | 152, 1025, 1361, 1482, 2772, 3276, 3381, 3478 |
| MbiI | CCGCTC | 1 cut(s) | 915 |
| MboI | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| MfeI | CAATTG | 5 cut(s) | 465, 2046, 2136, 2802, 3128 |
| MflI | RGATCY | 2 cut(s) | 1480, 3379 |
| MhlI | GDGCHC | 3 cut(s) | 285, 1400, 3220 |
| MlyI | GAGTC | 3 cut(s) | 1681, 2562, 2657 |
| MmeI | TCCRAC | 4 cut(s) | 857, 886, 1036, 2074 |
| Mph1103I | ATGCAT | 2 cut(s) | 347, 3256 |
| MroXI | GAANNNNTTC | 6 cut(s) | 395, 1007, 1566, 2249, 2614, 3373 |
| MspI | CCGG | 4 cut(s) | 2647, 2679, 3301, 3465 |
| MspR9I | CCNGG | 6 cut(s) | 968, 1052, 1712, 2534, 2960, 3465 |
| MunI | CAATTG | 5 cut(s) | 465, 2046, 2136, 2802, 3128 |
| Mva1269I | GAATGC | 2 cut(s) | 413, 1414 |
| MvaI | CCWGG | 5 cut(s) | 968, 1052, 1712, 2534, 2960 |
| NciI | CCSGG | 1 cut(s) | 3465 |
| NdeI | CATATG | 2 cut(s) | 1606, 3004 |
| NdeII | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| NlaIV | GGNNCC | 7 cut(s) | 1056, 1482, 2964, 3125, 3183, 3352, 3381 |
| NmeAIII | GCCGAG | 1 cut(s) | 2053 |
| NmuCI | GTSAC | 5 cut(s) | 73, 1586, 2422, 2548, 3422 |
| NsiI | ATGCAT | 2 cut(s) | 347, 3256 |
| NspI | RCATGY | 1 cut(s) | 349 |
| NspV | TTCGAA | 1 cut(s) | 3498 |
| PaeI | GCATGC | 1 cut(s) | 349 |
| PagI | TCATGA | 3 cut(s) | 387, 687, 1843 |
| PceI | AGGCCT | 1 cut(s) | 1041 |
| PciSI | GCTCTTC | 1 cut(s) | 3225 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3399 |
| PctI | GAATGC | 2 cut(s) | 413, 1414 |
| PdmI | GAANNNNTTC | 6 cut(s) | 395, 1007, 1566, 2249, 2614, 3373 |
| PfeI | GAWTC | 4 cut(s) | 1562, 2250, 2901, 3230 |
| PflFI | GACNNNGTC | 2 cut(s) | 3561, 3653 |
| PfoI | TCCNGGA | 1 cut(s) | 3463 |
| PinAI | ACCGGT | 1 cut(s) | 3300 |
| PleI | GAGTC | 3 cut(s) | 1681, 2562, 2657 |
| PpsI | GAGTC | 3 cut(s) | 1681, 2562, 2657 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2843 |
| PsiI | TTATAA | 1 cut(s) | 1508 |
| Psp6I | CCWGG | 5 cut(s) | 966, 1050, 1710, 2532, 2958 |
| PspFI | CCCAGC | 1 cut(s) | 2141 |
| PspGI | CCWGG | 5 cut(s) | 966, 1050, 1710, 2532, 2958 |
| PspN4I | GGNNCC | 7 cut(s) | 1056, 1482, 2964, 3125, 3183, 3352, 3381 |
| PspPI | GGNCC | 4 cut(s) | 1457, 2384, 3124, 3259 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2178, 2210 |
| PstI | CTGCAG | 4 cut(s) | 124, 135, 2527, 3052 |
| PsuI | RGATCY | 2 cut(s) | 1480, 3379 |
| PsyI | GACNNNGTC | 2 cut(s) | 3561, 3653 |
| RsaI | GTAC | 6 cut(s) | 561, 619, 1756, 2240, 2276, 2366 |
| RsaNI | GTAC | 6 cut(s) | 560, 618, 1755, 2239, 2275, 2365 |
| SapI | GCTCTTC | 1 cut(s) | 3225 |
| Sau3AI | GATC | 8 cut(s) | 150, 1023, 1359, 1480, 2770, 3274, 3379, 3476 |
| Sau96I | GGNCC | 4 cut(s) | 1457, 2384, 3124, 3259 |
| SchI | GAGTC | 3 cut(s) | 1681, 2562, 2657 |
| ScrFI | CCNGG | 6 cut(s) | 968, 1052, 1712, 2534, 2960, 3465 |
| SduI | GDGCHC | 3 cut(s) | 285, 1400, 3220 |
| SfcI | CTRYAG | 8 cut(s) | 120, 131, 1248, 1758, 2064, 2523, 2918, 3048 |
| SfuI | TTCGAA | 1 cut(s) | 3498 |
| SinI | GGWCC | 3 cut(s) | 1457, 3124, 3259 |
| SmlI | CTYRAG | 2 cut(s) | 1393, 2035 |
| SmoI | CTYRAG | 2 cut(s) | 1393, 2035 |
| SphI | GCATGC | 1 cut(s) | 349 |
| SseBI | AGGCCT | 1 cut(s) | 1041 |
| SsiI | CCGC | 8 cut(s) | 885, 915, 1390, 1626, 1838, 1946, 3138, 3451 |
| SspI | AATATT | 3 cut(s) | 204, 1090, 2631 |
| SspMI | CTAG | 8 cut(s) | 1254, 1346, 1751, 2298, 2588, 2667, 2742, 3200 |
| StuI | AGGCCT | 1 cut(s) | 1041 |
| StyD4I | CCNGG | 6 cut(s) | 966, 1050, 1710, 2532, 2958, 3463 |
| StyI | CCWWGG | 2 cut(s) | 627, 859 |
| TaiI | ACGT | 7 cut(s) | 732, 2757, 3241, 3629, 3643, 3657, 3688 |
| TaqI | TCGA | 6 cut(s) | 1679, 1972, 2566, 2837, 2904, 3498 |
| TaqII | GACCGA | 1 cut(s) | 3276 |
| TatI | WGTACW | 4 cut(s) | 559, 617, 2238, 2364 |
| TauI | GCSGC | 2 cut(s) | 1840, 3454 |
| TfiI | GAWTC | 4 cut(s) | 1562, 2250, 2901, 3230 |
| TseFI | GTSAC | 5 cut(s) | 73, 1586, 2422, 2548, 3422 |
| Tsp45I | GTSAC | 5 cut(s) | 73, 1586, 2422, 2548, 3422 |
| TspGWI | ACGGA | 4 cut(s) | 407, 1841, 2551, 3408 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3561, 3653 |
| VpaK11BI | GGWCC | 3 cut(s) | 1457, 3124, 3259 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2208 |
| XapI | RAATTY | 7 cut(s) | 13, 1160, 1278, 1318, 1858, 2714, 2760 |
| XceI | RCATGY | 1 cut(s) | 349 |
| XmiI | GTMKAC | 2 cut(s) | 2491, 2746 |
| XmnI | GAANNNNTTC | 6 cut(s) | 395, 1007, 1566, 2249, 2614, 3373 |
| XspI | CTAG | 8 cut(s) | 1254, 1346, 1751, 2298, 2588, 2667, 2742, 3200 |
| ZraI | GACGTC | 1 cut(s) | 3655 |
| Zsp2I | ATGCAT | 2 cut(s) | 347, 3256 |