Rmu_sc0003813.1_g000004

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003813.1
Physical Location & Seq
Reverse (-)
16588 .. 23358
6771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003813.1_g000004.1.cds

Sequence Viewer

Length: 4122 bp
atggctgatcaggaaaaccatatggatggagatcatgatgtaattgcagagccaggcacggcatcagcagtggccgcagattcgaagaataataaccaagaggatacaggcaagagcaaggaggatgcaaccggttcagtaccatattacaagctcttctcctttgctgattctatggattacctgttaatgtctgttggtacgatcagtgctattggaaacggattatgtatgcctctaatgactgtgatcatgggagaagtgattaactctttcggagaaactccgaataccaaaaaagtggttggtatagtttccaaggttgctctaaaatatgtttacttggctttgggggctgcagcagctgcatttttacagatgtcttgctgggtgatcaccggagagagacaggcagcacgaataagaagtttatacttgaagacaatcctaaggcaagatgttggttttttcgataaagaagttaccaccggggaaatagttggaagaatttcaggtgatactgtgctcattcaagaggccatgggcgagaaagtaggaagtattatccagttagttgcaacattcataggaggctttgtcatagcatttgctaagggatggcgtctcacccttgtcatgctgacctctattccccctcttgttttcgccggtgctgtattgagcttcactgtaaagaggatgactactcgtggacaagctgcttattcagtgggagcaactgtggtagagcagacaatcggttcaatcagaactgttgcatcatttacaggtgagaagcaagctgtaacaaagtacaacaactcattagacaaagcttacaagtctggagtgcaagaaggtttggcatcagggtttggtcttggcgcgattgtgcttattgtattctgcagctatgctttggctgtatggtatggcggaaaaatgatacttgaacaaggatataaagcaggagatgtcatgaatgtgatatttgcagtattaactggctccttctctcttggacaagcatctccatgcataagtgcattttcggctggacaagctgcagcttacaagatgtttgaaacaattaacagaaagccagagatagatgcttctgatactaatgggaagcaattagaagacatccgaggagaaatagaatttagggatgtttattttagttatcctgcaagaccagatgaacaaatattccaaggattctcactctcaatatctagtggtgcaactgctgctctggtaggacagagcggaagtggtaaatctactataatcagtttgattgagagattttatgacccacaggcaggcgaagttcttatcgatggcattaatctcaaagagttccagctgaaatggatcagacagaaaatagggcttgtcagccaggaacctgttttgtttacttgcagcattaaagataatattacctatgggaaggatggagcaacttttgaagaaataaaggctgctgctgagcttgccaatgctgctaaattcatagacaaattacctcagggactagatacaatggttggggagcatggaactcagctatctgggggccaaaagcaaagagttgccatagctagagcaatccttaagaacccgagaattctgcttttagatgaagctacaagtgctcttgatgcagaatctgagagggttgtgcaagaggcattggacagagttatggttagccggactactgtgattgtagcccaccgcttgagcacagtgaggaatgctgatacgattgcagttataaatcgcggaaaaattgttgaacaaggaccacattctgaactagttaaggttcctgatggagcatatagccagcttataaggttgcaacaaattagcagtgtgtcagaacagaactctcaaaatgttcaggaaattaggccattgtcaaactctagaagagatagaagtccaagactttctcccttacaatccataagtcgaggatcatctggaaatactagtccccactcattctcaatctcacatggtgcgcctactgtaataggtgtgcttgaaatagcaccaactgaacctcacattctagctgcatcatcagaactgcatccagaagtctcacttagccgcctagcttacctgaacaagccagaaatcccagtgctaattctaggtactatagctgcagcaattaatggggtaatattgcctattttcggggtgttaatatccagtataattaagaccttctttgagccacctcatcaacttcaaaaggattccaagttttggtcattaatctttattcttcttggagtggcatctctcttggcatatccattgaaagcatacttttttgctgtggctgggggcaagttaataagacgagttcgatcactatgctttgagaaggtgattcacatggaagtaagttggttcgatgaagctgagcactcaagtggtgcaattggtgcaaggctttctgcagatgctgcctctctccgagggctggttggagatgctctaggtttggctgttttgaatggatcaactgcaattgctggattggttattgcttttgtggcaaattggcaacttgctcttataatccttattctcctacctctactaggaataagtggatatttccaggtccagttcctaaaaggattaagcgctagtgcaaagaaaatgtatgaagacgcaagccaagtagccacagatgctgtggggaatattagaacaattgcttcattttgtgctgaagaaaaggttatcaagttgtaccacacaaaatgtgaaggtcctatcaaggcagggatacgacaagggatagtcagtgggataggctttggactatcgttcttcttgctcttctctgtatatgcatgtagtttctatgctggtgctcaacttgtaggagcaggcaagacaacattccctgatgtttttcggggttccgttgcccctgattcaattaaaggaaagagcgctgccgcttctatatttgcacttcttgaccaaaaatcaaaaatagattctagtgatgactctggaacaaccattctaaatgtgaaaggagaaatccaatttcgtcatgttagtttcaagtatcctaatagacctaacgtgccaatcttccgggatctttgcttgaccattcaccatggcaagacacttgcactggtgggagaaagtggaagtggaaaatcgaccgtgatcttattgcttcagagattttatgaccctgattcaggtcatattacattagatagtgttgaaatgaaaactttacagttgaagtggctgagacagcaaatggggttggtgagccaggagcctctattgtttaatgacactataagagccaacattgcatatggaaaggaagggattgcaaccgaggctgaaattatagctgcagcagaattggcaaatgtccacaagttcattagtagtttgcaacagggttatgatacaatagtgggcgagcgaggggttcaactgtctggtggacagaagcaaagggtggctattgcaagagcgataatgaaggcaccaaagatattacaactagatgaagccactagtgctcttgatgctgaatccgaacgagtggttcaagatgcactagatcgagttatggtggatagaaccacagttgtggttgcacatcgtttatccacgattaagggtgcagatttaatagcagtggtgaaaaatggagtaattgcagagaaaggaaagcatgaatctttgatcaatatcaagggcccagcagaatttttccactcccacaatgcccccaaattttctcttcggacactcgtcctaagaggaaatttccattctctggctgcttcaaatcttgcctcgaatatttcctcgagccctggccgtctcgattctttcctcgagccctggctggcccgattctttcctcaggccctggtcgccccaattctttcctcgggccctggctgtcctagccgcccggaatctttcctcgggccctggccgcctctattctttcctcaggtcctagccgccttgattctttcctcaaggcgaagattcattttcagcatgagacatggaattgcccccatttccctttga

Protein Analysis

1373

Amino Acids

147.84

Weight (kDa)

8.67

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1787, 1865, 2609
AccB1I GGYRCC 1 cut(s) 3559
AccB7I CCANNNNNTGG 2 cut(s) 2292, 3856
AccBSI CCGCTC 1 cut(s) 1272
AccII CGCG 2 cut(s) 887, 1794
AclWI GGATC 4 cut(s) 1388, 1999, 2557, 3156
AcoI YGGCCR 3 cut(s) 72, 3898, 4019
AcsI RAATTY 7 cut(s) 507, 1163, 1517, 1635, 3785, 3812, 3844
AcuI CTGAAG 2 cut(s) 2787, 3218
AcyI GRCGYC 1 cut(s) 622
AdeI CACNNNGTG 1 cut(s) 2036
AfaI GTAC 5 cut(s) 141, 202, 815, 2179, 2789
AfeI AGCGCT 2 cut(s) 2680, 2995
AfiI CCNNNNNNNGG 7 cut(s) 1328, 2219, 2292, 2512, 2633, 3257, 3856
AflII CTTAAG 1 cut(s) 1622
AgeI ACCGGT 1 cut(s) 131
AhlI ACTAGT 3 cut(s) 1828, 2006, 3590
AjnI CCWGG 9 cut(s) 52, 1407, 2652, 3336, 3895, 3923, 3951, 3979, 4016
AleI CACNNNNGTG 2 cut(s) 2460, 3665
AloI GAACNNNNNNTCC 2 cut(s) 1197, 1229
Alw21I GWGCWC 6 cut(s) 528, 1666, 1757, 2457, 2914, 3598
Alw26I GTCTC 6 cut(s) 400, 629, 2125, 3307, 3908, 4087
AlwI GGATC 4 cut(s) 1388, 1999, 2557, 3156
AlwNI CAGNNNCTG 5 cut(s) 365, 1679, 2495, 2729, 3952
Ama87I CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
Aor51HI AGCGCT 2 cut(s) 2680, 2995
ApaI GGGCCC 3 cut(s) 3779, 3980, 4017
ApoI RAATTY 7 cut(s) 507, 1163, 1517, 1635, 3785, 3812, 3844
AseI ATTAAT 3 cut(s) 1353, 2196, 2300
AsiGI ACCGGT 1 cut(s) 131
Asp700I GAANNNNTTC 1 cut(s) 508
AspLEI GCGC 4 cut(s) 887, 2041, 2681, 2996
AsuC2I CCSGG 3 cut(s) 490, 3146, 3998
AsuHPI GGTGA 9 cut(s) 388, 403, 527, 619, 803, 2428, 3158, 3343, 3730
AsuII TTCGAA 1 cut(s) 83
AvaI CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
AvaII GGWCC 4 cut(s) 1814, 2656, 2807, 4042
AxyI CCTNAGG 4 cut(s) 449, 1536, 3945, 4038
BaeGI GKGCMC 3 cut(s) 3779, 3980, 4017
BaeI ACNNNNGTAYC 4 cut(s) 1539, 1572, 3471, 3504
BanI GGYRCC 1 cut(s) 3559
BanII GRGCYC 5 cut(s) 3779, 3896, 3924, 3980, 4017
BauI CACGAG 1 cut(s) 708
BbsI GAAGAC 3 cut(s) 446, 1149, 2709
Bbv12I GWGCWC 6 cut(s) 528, 1666, 1757, 2457, 2914, 3598
BccI CCATC 5 cut(s) 20, 612, 1340, 1457, 1838
BceAI ACGGC 2 cut(s) 75, 3885
BcgI CGANNNNNNTGC 4 cut(s) 1621, 1655, 2385, 2419
BciT130I CCWGG 9 cut(s) 54, 1409, 2654, 3338, 3897, 3925, 3953, 3981, 4018
BciVI GTATCC 3 cut(s) 97, 2817, 3126
BclI TGATCA 4 cut(s) 7, 249, 393, 3762
BcnI CCSGG 3 cut(s) 490, 3146, 3998
BcoDI GTCTC 6 cut(s) 400, 629, 2125, 3307, 3908, 4087
BcuI ACTAGT 3 cut(s) 1828, 2006, 3590
BfmI CTRYAG 7 cut(s) 357, 907, 1065, 2181, 2187, 2487, 3423
BfoI RGCGCY 2 cut(s) 2682, 2997
BfrI CTTAAG 1 cut(s) 1622
BfuI GTATCC 3 cut(s) 97, 2817, 3126
BlpI GCTNAGC 2 cut(s) 1497, 2451
Bme18I GGWCC 4 cut(s) 1814, 2656, 2807, 4042
BmeT110I CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
BmrI ACTGGG 1 cut(s) 2156
BmuI ACTGGG 1 cut(s) 2156
BoxI GACNNNNGTC 1 cut(s) 3830
BpiI GAAGAC 3 cut(s) 446, 1149, 2709
BpmI CTGGAG 1 cut(s) 867
Bpu10I CCTNAGC 1 cut(s) 612
Bpu1102I GCTNAGC 2 cut(s) 1497, 2451
Bpu14I TTCGAA 1 cut(s) 83
BpuEI CTTGAG 3 cut(s) 1771, 2443, 4051
BpuMI CCSGG 3 cut(s) 490, 3146, 3998
Bsa29I ATCGAT 1 cut(s) 1344
BsaBI GATNNNNATC 2 cut(s) 30, 3767
BsaHI GRCGYC 1 cut(s) 622
BsaWI WCCGGW 2 cut(s) 131, 398
BsaXI ACNNNNNCTCC 4 cut(s) 582, 612, 726, 756
Bsc4I CCNNNNNNNGG 7 cut(s) 1328, 2219, 2292, 2512, 2633, 3257, 3856
Bse118I RCCGGY 2 cut(s) 131, 668
Bse1I ACTGG 6 cut(s) 568, 1009, 2162, 2235, 2659, 3192
Bse21I CCTNAGG 4 cut(s) 449, 1536, 3945, 4038
Bse3DI GCAATG 1 cut(s) 3375
Bse8I GATNNNNATC 2 cut(s) 30, 3767
BseBI CCWGG 9 cut(s) 54, 1409, 2654, 3338, 3897, 3925, 3953, 3981, 4018
BseCI ATCGAT 1 cut(s) 1344
BseGI GGATG 8 cut(s) 31, 130, 623, 705, 1146, 1177, 1468, 2110
BseJI GATNNNNATC 2 cut(s) 30, 3767
BseLI CCNNNNNNNGG 7 cut(s) 1328, 2219, 2292, 2512, 2633, 3257, 3856
BseMI GCAATG 1 cut(s) 3375
BseMII CTCAG 8 cut(s) 1488, 1550, 1586, 1671, 2442, 3302, 3959, 4052
BseNI ACTGG 6 cut(s) 568, 1009, 2162, 2235, 2659, 3192
BseRI GAGGAG 1 cut(s) 1167
BseSI GKGCMC 3 cut(s) 3779, 3980, 4017
BseYI CCCAGC 3 cut(s) 387, 2369, 3778
BsgI GTGCAG 1 cut(s) 3720
Bsh1236I CGCG 2 cut(s) 887, 1794
Bsh1285I CGRYCG 1 cut(s) 3219
BshNI GGYRCC 1 cut(s) 3559
BshTI ACCGGT 1 cut(s) 131
BshVI ATCGAT 1 cut(s) 1344
BsiEI CGRYCG 1 cut(s) 3219
BsiHKAI GWGCWC 6 cut(s) 528, 1666, 1757, 2457, 2914, 3598
BsiHKCI CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
BsiSI CCGG 7 cut(s) 132, 399, 489, 669, 1723, 3145, 3998
BslFI GGGAC 2 cut(s) 1554, 1995
BslI CCNNNNNNNGG 7 cut(s) 1328, 2219, 2292, 2512, 2633, 3257, 3856
BsmAI GTCTC 6 cut(s) 400, 629, 2125, 3307, 3908, 4087
BsmBI CGTCTC 2 cut(s) 629, 3908
BsmFI GGGAC 2 cut(s) 1554, 1995
BsmI GAATGC 1 cut(s) 1771
BsoBI CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
Bsp119I TTCGAA 1 cut(s) 83
Bsp120I GGGCCC 3 cut(s) 3775, 3976, 4013
Bsp1720I GCTNAGC 2 cut(s) 1497, 2451
Bsp19I CCATGG 2 cut(s) 540, 3169
BspCNI CTCAG 8 cut(s) 1489, 1549, 1585, 1672, 2443, 3303, 3958, 4051
BspDI ATCGAT 1 cut(s) 1344
BspFNI CGCG 2 cut(s) 887, 1794
BspHI TCATGA 2 cut(s) 34, 978
BspMAI CTGCAG 6 cut(s) 361, 911, 1069, 2191, 2491, 3427
BspPI GGATC 4 cut(s) 1388, 1999, 2557, 3156
BspQI GCTCTTC 2 cut(s) 161, 2882
BspT104I TTCGAA 1 cut(s) 83
BspT107I GGYRCC 1 cut(s) 3559
BspTI CTTAAG 1 cut(s) 1622
BsrBI CCGCTC 1 cut(s) 1272
BsrDI GCAATG 1 cut(s) 3375
BsrFI RCCGGY 2 cut(s) 131, 668
BsrI ACTGG 6 cut(s) 568, 1009, 2162, 2235, 2659, 3192
BssAI RCCGGY 2 cut(s) 131, 668
BssNI GRCGYC 1 cut(s) 622
BssSI CACGAG 1 cut(s) 708
BssT1I CCWWGG 4 cut(s) 318, 540, 1216, 3169
Bst2BI CACGAG 1 cut(s) 708
Bst2UI CCWGG 9 cut(s) 54, 1409, 2654, 3338, 3897, 3925, 3953, 3981, 4018
Bst6I CTCTTC 4 cut(s) 161, 1939, 2882, 3825
BstACI GRCGYC 1 cut(s) 622
BstAFI CTTAAG 1 cut(s) 1622
BstAPI GCANNNNNTGC 4 cut(s) 365, 1253, 2474, 2495
BstBI TTCGAA 1 cut(s) 83
BstC8I GCNNGC 8 cut(s) 801, 1330, 1503, 1859, 2710, 2929, 3494, 3930
BstDSI CCRYGG 2 cut(s) 540, 3169
BstENI CCTNNNNNAGG 2 cut(s) 2631, 3255
BstF5I GGATG 8 cut(s) 31, 130, 623, 705, 1146, 1177, 1468, 2110
BstFNI CGCG 2 cut(s) 887, 1794
BstH2I RGCGCY 2 cut(s) 2682, 2997
BstHHI GCGC 4 cut(s) 887, 2041, 2681, 2996
BstMAI GTCTC 6 cut(s) 400, 629, 2125, 3307, 3908, 4087
BstMCI CGRYCG 1 cut(s) 3219
BstNI CCWGG 9 cut(s) 54, 1409, 2654, 3338, 3897, 3925, 3953, 3981, 4018
BstNSI RCATGY 1 cut(s) 2895
BstPAI GACNNNNGTC 1 cut(s) 3830
BstSFI CTRYAG 7 cut(s) 357, 907, 1065, 2181, 2187, 2487, 3423
BstSLI GKGCMC 3 cut(s) 3779, 3980, 4017
BstUI CGCG 2 cut(s) 887, 1794
BstV2I GAAGAC 3 cut(s) 446, 1149, 2709
BstX2I RGATCY 1 cut(s) 3148
BstXI CCANNNNNNTGG 3 cut(s) 26, 301, 3667
BstYI RGATCY 1 cut(s) 3148
Bsu15I ATCGAT 1 cut(s) 1344
Bsu36I CCTNAGG 4 cut(s) 449, 1536, 3945, 4038
BsuI GTATCC 3 cut(s) 97, 2817, 3126
BsuTUI ATCGAT 1 cut(s) 1344
BtgI CCRYGG 2 cut(s) 540, 3169
BtsCI GGATG 8 cut(s) 31, 130, 623, 705, 1146, 1177, 1468, 2110
BtsI GCAGTG 3 cut(s) 75, 1891, 3720
Cac8I GCNNGC 8 cut(s) 801, 1330, 1503, 1859, 2710, 2929, 3494, 3930
CaiI CAGNNNCTG 5 cut(s) 365, 1679, 2495, 2729, 3952
CciI TCATGA 2 cut(s) 34, 978
CfoI GCGC 4 cut(s) 887, 2041, 2681, 2996
Cfr10I RCCGGY 2 cut(s) 131, 668
ClaI ATCGAT 1 cut(s) 1344
CseI GACGC 2 cut(s) 611, 2714
Csp6I GTAC 5 cut(s) 140, 201, 814, 2178, 2788
CspAI ACCGGT 1 cut(s) 131
CviQI GTAC 5 cut(s) 140, 201, 814, 2178, 2788
DraIII CACNNNGTG 1 cut(s) 2036
EaeI YGGCCR 3 cut(s) 72, 3898, 4019
Eam1104I CTCTTC 4 cut(s) 161, 1939, 2882, 3825
EarI CTCTTC 4 cut(s) 161, 1939, 2882, 3825
EciI GGCGGA 1 cut(s) 951
Eco130I CCWWGG 4 cut(s) 318, 540, 1216, 3169
Eco24I GRGCYC 5 cut(s) 3779, 3896, 3924, 3980, 4017
Eco47I GGWCC 4 cut(s) 1814, 2656, 2807, 4042
Eco47III AGCGCT 2 cut(s) 2680, 2995
Eco57I CTGAAG 2 cut(s) 2787, 3218
Eco81I CCTNAGG 4 cut(s) 449, 1536, 3945, 4038
Eco88I CYCGRG 5 cut(s) 1630, 3889, 3917, 3973, 4010
EcoNI CCTNNNNNAGG 2 cut(s) 2631, 3255
EcoO109I RGGNCCY 6 cut(s) 2807, 3775, 3949, 3977, 4014, 4042
EcoRI GAATTC 1 cut(s) 1635
EcoRII CCWGG 9 cut(s) 52, 1407, 2652, 3336, 3895, 3923, 3951, 3979, 4016
EcoT14I CCWWGG 4 cut(s) 318, 540, 1216, 3169
EcoT22I ATGCAT 2 cut(s) 1040, 2893
EcoT38I GRGCYC 5 cut(s) 3779, 3896, 3924, 3980, 4017
ErhI CCWWGG 4 cut(s) 318, 540, 1216, 3169
Esp3I CGTCTC 2 cut(s) 629, 3908
FalI AAGNNNNNCTT 4 cut(s) 2109, 2141, 2237, 2269
FaqI GGGAC 2 cut(s) 1554, 1995
FauNDI CATATG 2 cut(s) 21, 3382
FbaI TGATCA 4 cut(s) 7, 249, 393, 3762
FokI GGATG 8 cut(s) 38, 137, 630, 712, 1133, 1184, 1475, 2097
FriOI GRGCYC 5 cut(s) 3779, 3896, 3924, 3980, 4017
GlaI GCGC 4 cut(s) 886, 2040, 2680, 2995
GsaI CCCAGC 3 cut(s) 391, 2373, 3782
GsuI CTGGAG 1 cut(s) 867
HaeII RGCGCY 2 cut(s) 2682, 2997
HapII CCGG 7 cut(s) 132, 399, 489, 669, 1723, 3145, 3998
HgaI GACGC 2 cut(s) 611, 2714
HhaI GCGC 4 cut(s) 887, 2041, 2681, 2996
Hin1I GRCGYC 1 cut(s) 622
Hin6I GCGC 4 cut(s) 885, 2039, 2679, 2994
HinP1I GCGC 4 cut(s) 885, 2039, 2679, 2994
HindIII AAGCTT 1 cut(s) 834
HpaII CCGG 7 cut(s) 132, 399, 489, 669, 1723, 3145, 3998
HphI GGTGA 9 cut(s) 388, 403, 527, 619, 803, 2428, 3158, 3343, 3730
Hpy166II GTNNAC 5 cut(s) 340, 713, 1425, 3445, 3518
Hpy8I GTNNAC 5 cut(s) 340, 713, 1425, 3445, 3518
HpyAV CCTTC 8 cut(s) 851, 1021, 1453, 2260, 2407, 2798, 3386, 3550
HpyCH4IV ACGT 1 cut(s) 3132
HpySE526I ACGT 1 cut(s) 3132
Hsp92I GRCGYC 1 cut(s) 622
HspAI GCGC 4 cut(s) 885, 2039, 2679, 2994
Ksp22I TGATCA 4 cut(s) 7, 249, 393, 3762
LguI GCTCTTC 2 cut(s) 161, 2882
LmnI GCTCC 7 cut(s) 734, 1013, 1466, 1561, 1847, 2924, 3340
MaeII ACGT 1 cut(s) 3132
MaeIII GTNAC 2 cut(s) 481, 805
MbiI CCGCTC 1 cut(s) 1272
MfeI CAATTG 3 cut(s) 2469, 2559, 2748
MflI RGATCY 1 cut(s) 3148
MlyI GAGTC 1 cut(s) 3047
MmeI TCCRAC 2 cut(s) 481, 2497
Mph1103I ATGCAT 2 cut(s) 1040, 2893
MroXI GAANNNNTTC 1 cut(s) 508
MslI CAYNNNNRTG 5 cut(s) 24, 983, 1033, 2460, 3665
MspA1I CMGCKG 2 cut(s) 365, 1372
MspCI CTTAAG 1 cut(s) 1622
MspI CCGG 7 cut(s) 132, 399, 489, 669, 1723, 3145, 3998
MunI CAATTG 3 cut(s) 2469, 2559, 2748
Mva1269I GAATGC 1 cut(s) 1771
MvaI CCWGG 9 cut(s) 54, 1409, 2654, 3338, 3897, 3925, 3953, 3981, 4018
MvnI CGCG 2 cut(s) 887, 1794
NciI CCSGG 3 cut(s) 490, 3146, 3998
NcoI CCATGG 2 cut(s) 540, 3169
NdeI CATATG 2 cut(s) 21, 3382
NsiI ATGCAT 2 cut(s) 1040, 2893
NspI RCATGY 1 cut(s) 2895
NspV TTCGAA 1 cut(s) 83
OliI CACNNNNGTG 2 cut(s) 2460, 3665
PaeR7I CTCGAG 2 cut(s) 3889, 3917
PagI TCATGA 2 cut(s) 34, 978
PciSI GCTCTTC 2 cut(s) 161, 2882
PctI GAATGC 1 cut(s) 1771
PdmI GAANNNNTTC 1 cut(s) 508
PflMI CCANNNNNTGG 2 cut(s) 2292, 3856
PfoI TCCNGGA 1 cut(s) 3144
PinAI ACCGGT 1 cut(s) 131
PleI GAGTC 1 cut(s) 3047
PpsI GAGTC 1 cut(s) 3047
PpuMI RGGWCCY 2 cut(s) 2807, 4042
PshAI GACNNNNGTC 1 cut(s) 3830
PshBI ATTAAT 3 cut(s) 1353, 2196, 2300
PsiI TTATAA 3 cut(s) 1787, 1865, 2609
Psp5II RGGWCCY 2 cut(s) 2807, 4042
Psp6I CCWGG 9 cut(s) 52, 1407, 2652, 3336, 3895, 3923, 3951, 3979, 4016
PspFI CCCAGC 3 cut(s) 387, 2369, 3778
PspGI CCWGG 9 cut(s) 52, 1407, 2652, 3336, 3895, 3923, 3951, 3979, 4016
PspOMI GGGCCC 3 cut(s) 3775, 3976, 4013
PspPPI RGGWCCY 2 cut(s) 2807, 4042
PspXI VCTCGAGB 2 cut(s) 3889, 3917
PstI CTGCAG 6 cut(s) 361, 911, 1069, 2191, 2491, 3427
PstNI CAGNNNCTG 5 cut(s) 365, 1679, 2495, 2729, 3952
PsuI RGATCY 1 cut(s) 3148
PvuII CAGCTG 2 cut(s) 365, 1372
RsaI GTAC 5 cut(s) 141, 202, 815, 2179, 2789
RsaNI GTAC 5 cut(s) 140, 201, 814, 2178, 2788
RseI CAYNNNNRTG 5 cut(s) 24, 983, 1033, 2460, 3665
SapI GCTCTTC 2 cut(s) 161, 2882
SchI GAGTC 1 cut(s) 3047
SfcI CTRYAG 7 cut(s) 357, 907, 1065, 2181, 2187, 2487, 3423
Sfr274I CTCGAG 2 cut(s) 3889, 3917
SfuI TTCGAA 1 cut(s) 83
SgrAI CRCCGGYG 1 cut(s) 668
SinI GGWCC 4 cut(s) 1814, 2656, 2807, 4042
SlaI CTCGAG 2 cut(s) 3889, 3917
SmiMI CAYNNNNRTG 5 cut(s) 24, 983, 1033, 2460, 3665
SmlI CTYRAG 6 cut(s) 1622, 1750, 2458, 3889, 3917, 4066
SmoI CTYRAG 6 cut(s) 1622, 1750, 2458, 3889, 3917, 4066
SpeI ACTAGT 3 cut(s) 1828, 2006, 3590
SspI AATATT 5 cut(s) 1212, 1447, 2208, 2740, 3883
StyI CCWWGG 4 cut(s) 318, 540, 1216, 3169
TaiI ACGT 1 cut(s) 3135
TatI WGTACW 1 cut(s) 813
TauI GCSGC 6 cut(s) 77, 2133, 3002, 3996, 4024, 4052
TspGWI ACGGA 2 cut(s) 237, 2953
Van91I CCANNNNNTGG 2 cut(s) 2292, 3856
Vha464I CTTAAG 1 cut(s) 1622
VpaK11BI GGWCC 4 cut(s) 1814, 2656, 2807, 4042
VspI ATTAAT 3 cut(s) 1353, 2196, 2300
XagI CCTNNNNNAGG 2 cut(s) 2631, 3255
XapI RAATTY 7 cut(s) 507, 1163, 1517, 1635, 3785, 3812, 3844
XbaI TCTAGA 1 cut(s) 1940
XceI RCATGY 1 cut(s) 2895
XcmI CCANNNNNNNNNTGG 1 cut(s) 2728
XhoI CTCGAG 2 cut(s) 3889, 3917
XmnI GAANNNNTTC 1 cut(s) 508
Zsp2I ATGCAT 2 cut(s) 1040, 2893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.