Rmu_co8517461.1_g000001

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8517461.1
Physical Location & Seq
Reverse (-)
1 .. 4501
4501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8517461.1_g000001.1.cds

Sequence Viewer

Length: 3090 bp
atggctgaggagaatggggtgaatggtgataccaaaaatcatgaaaaccatgcagaagaagagaaaagctcagcccccataaatagggatcagccaggctcatcagatagcaatggagatgagaaagttgaaaagattcctttctccaagctattctcctttgcagataagactgatgttatcttgatggttgtcggcacgattggtgccattgggaatggttcttgtatgcccctcatgacggtattgtttggggagatgatagattcttttggatctaatcaaaattcagacatagtctcagttgtttcaaaggtctctctgaaatttgtttacctggctgtgggagcagctgtggcagcatttctccaggtgtcttgctggatggtcacaggggaaagacaagctgcaagaattagaggtttgtatttgaaaacaatattgagacaagatgttgctttcttcgatatggaaacaaacactggagaggtagttgggagaatgtctggtgacactgttctcattcaagatgccatgggggagaaggttggaaaattcttacagctgcttgcaacattcattggagggtttataatagcattcatcaaagggtggcttctcactcttgtcatgctatcctctattcctttgcttgtggcatctggtgcaacgatgtccatcattataaccaagatggcatcccgtggacaaactgcttacgcaaaagcagcaaatgtagttgaacaaacaattgggtccattagaaccgttgcatcatttactggcgagagggaagctataactagttataacaaatatctcgtagatgcttacaaatcaggtgttcatgaaggttcagctgctggaataggtcttggcttggttatgtgtgttgtgttcagctcatatgccttggctgtatggtttggttcaaagatgataagggaaaatggatatactgggggtgaagtactgaatgtgattgttgctgtgttgactggatctatgtctttagggcagacatcaccatgcatgagtgcatttgctgctggtcaagctgcagcttataagatgtttcagactattagtaggaagccagagatagatgcttatgatgaaaagggaaagactttgggtgacatttcgggagacatagagttgagagatgtttatttcagctatccagccagaccggatgagcaaatatttgactcattctctctttgtatccctagtggcacaactgctgctttggttggacaaagtggaagtggcaagtcaacagtcatcagtctgatagagagattttatgatccgcaagctggtgaagttttaatagatggcataaacctaaaagaatttcaacttaaatggattcggagtaaaattggtcttgtcagtcaggaacctgtcctgtttgcatccagcattaaggaaaatattgcctatggaaaggatggtgctaccactgaagagatacaagcagcagctgagcttgcaaatgcagctaaatttgttgataaattgcctcagggccttgacagcttggtcggtgatcgtggaactcagctgtctggcgggcagaagcagagaattgctattgcaagagcaattttgaaagacccaaggattttacttctggatgaagctacaagtgcacttgatgcagaatctgagagggtagttcaagaagcattggacaggattatggttaaccgaactactgttgttgtcgctcatcgtttgagtacagtgaggaatgcagacatgattgctgtcattcataaaggaaagatggttgaaaaaggttcgcacttgaatttactcaaagatcctgagggagcttactctcagcttatacgcttgcaagaagtaaacaaagagtcagaacaaacgtcagaagaccaaaacaaacctgatataactctggcatctcttagacagtcaagtcaaagaacatcaagtcaaagactttcgtttgcacgatccttaagtagaaattcctccgtaggaaatagcagccgtcactcatattcagtggcatttggtttacccactggacttggaggcattggtgtccaagatgctgcatatgaagaaacagaactagcaccagagcaacctccaaatgtatcactccgccgcattgctgccctgaacaaacctgagattccagttcttattattggaactatagctgcaatcatcaatggtgttatacttccaatattcggtgtgctcatttccagggttataaagactttctatgaaccacctcatcaacagaagaaagatgcagcattttgggcaataatttttatgatccttggtctgatatcatttgtggcgatcccagcacgaggatatttcttttcagtagctggcagcaagttaattcagcgtatcagattattgtgttttgagagagtggttcacatggaggttgggtggtttgatgagcctgagaactcaagtggtgcaattggtgcaaggctctcagcagatgcagcgtcggtgagggccctagtcggagacgctctagctcagatggttcaaaacatggcagctgcagttgcagttaacggatatgtacaaataaagttcatgaaaggattcagcgcagatgcaaagatgatgtatgaggaggcaagccaagttgctaatgacgcagttggaagtataagaacagttgcttctttctgtgctgaagagaaggtaatggaactatacagaaggaaatgtgaaggccctatgaagacagggataagacaaggcttgatcagtggtataggatttggggtatctttcttctttttgttttgtgtctacgcaaccagtttctatgcgggagctcaactagtgaaggctggcaaaacaacatttacagacgttttccaagttttctttgctctgaccatggcagctaccggaatttctcaatcaagctcctttggtcccgattctggtaaagccaaaacttctgctgcttccatatttgcaataatagaccggccatcaaagatagacccaagtaacgagactggtacgaaaattgatggtggtgtgaaaggagagattgagcttcgccat

Protein Analysis

1030

Amino Acids

110.77

Weight (kDa)

6.2

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 593, 686, 810, 1068, 2255
AasI GACNNNNNNGTC 2 cut(s) 1547, 1947
AccB1I GGYRCC 1 cut(s) 206
AccI GTMKAC 1 cut(s) 2826
AciI CCGC 5 cut(s) 1316, 1578, 2140, 2143, 2846
AclWI GGATC 8 cut(s) 96, 283, 1009, 1307, 1826, 1980, 2317, 2344
AcoI YGGCCR 1 cut(s) 3011
AcsI RAATTY 8 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999, 2931
AcuI CTGAAG 2 cut(s) 1491, 2727
AfaI GTAC 4 cut(s) 972, 1750, 2592, 3046
AfiI CCNNNNNNNGG 7 cut(s) 84, 241, 343, 1322, 2231, 2360, 2963
AflII CTTAAG 1 cut(s) 1990
AhlI ACTAGT 2 cut(s) 803, 2857
AjnI CCWGG 4 cut(s) 94, 336, 369, 2246
AjuI GAANNNNNNNTTGG 2 cut(s) 735, 767
Alw21I GWGCWC 3 cut(s) 1660, 2241, 2854
Alw26I GTCTC 6 cut(s) 304, 322, 439, 1143, 2526, 3032
Alw44I GTGCAC 1 cut(s) 1656
AlwI GGATC 8 cut(s) 96, 283, 1009, 1307, 1826, 1980, 2317, 2344
AlwNI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2381
AoxI GGCC 4 cut(s) 1534, 2520, 2746, 3011
ApaI GGGCCC 1 cut(s) 2524
ApaLI GTGCAC 1 cut(s) 1656
ApoI RAATTY 8 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999, 2931
Asp700I GAANNNNTTC 2 cut(s) 135, 2612
AspLEI GCGC 1 cut(s) 2621
AspS9I GGNCC 6 cut(s) 756, 1534, 2520, 2521, 2747, 2954
AsuHPI GGTGA 9 cut(s) 31, 38, 521, 977, 1017, 1148, 1337, 1565, 2527
AvaII GGWCC 2 cut(s) 756, 2954
AxyI CCTNAGG 2 cut(s) 1530, 1836
BaeGI GKGCMC 2 cut(s) 1660, 2524
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 2 cut(s) 2524, 2854
BauI CACGAG 1 cut(s) 2358
BbsI GAAGAC 2 cut(s) 1908, 2762
Bbv12I GWGCWC 3 cut(s) 1660, 2241, 2854
BbvCI CCTCAGC 1 cut(s) 6
BceAI ACGGC 1 cut(s) 2007
BciT130I CCWGG 4 cut(s) 96, 338, 371, 2248
BciVI GTATCC 1 cut(s) 1238
BclI TGATCA 1 cut(s) 2778
BcoDI GTCTC 6 cut(s) 304, 322, 439, 1143, 2526, 3032
BcuI ACTAGT 2 cut(s) 803, 2857
BfaI CTAG 6 cut(s) 804, 1233, 2108, 2525, 2540, 2858
BfmI CTRYAG 3 cut(s) 1059, 2193, 2568
BfrI CTTAAG 1 cut(s) 1990
BfuI GTATCC 1 cut(s) 1238
BlpI GCTNAGC 2 cut(s) 70, 1491
BmcAI AGTACT 1 cut(s) 972
Bme1390I CCNGG 4 cut(s) 96, 338, 371, 2248
Bme18I GGWCC 2 cut(s) 756, 2954
BmgT120I GGNCC 6 cut(s) 756, 1534, 2520, 2521, 2747, 2954
BmiI GGNNCC 5 cut(s) 208, 757, 1407, 2522, 2956
BmrFI CCNGG 4 cut(s) 96, 338, 371, 2248
BmrI ACTGGG 1 cut(s) 969
BmuI ACTGGG 1 cut(s) 969
BpiI GAAGAC 2 cut(s) 1908, 2762
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 2 cut(s) 353, 504
Bpu10I CCTNAGC 1 cut(s) 6
Bpu1102I GCTNAGC 2 cut(s) 70, 1491
BpuEI CTTGAG 1 cut(s) 2455
BsaBI GATNNNNATC 1 cut(s) 677
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 7 cut(s) 534, 703, 912, 1625, 2247, 2326, 2916
BsaWI WCCGGW 2 cut(s) 1192, 2927
BsaXI ACNNNNNCTCC 6 cut(s) 339, 369, 477, 507, 2432, 2462
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 241, 343, 1322, 2231, 2360, 2963
Bse118I RCCGGY 1 cut(s) 3009
Bse1I ACTGG 8 cut(s) 487, 787, 964, 1003, 2062, 2174, 2835, 3046
Bse21I CCTNAGG 2 cut(s) 1530, 1836
Bse3DI GCAATG 2 cut(s) 118, 2145
Bse8I GATNNNNATC 1 cut(s) 677
BseBI CCWGG 4 cut(s) 96, 338, 371, 2248
BseDI CCNNGG 7 cut(s) 534, 703, 912, 1625, 2247, 2326, 2916
BseGI GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BseJI GATNNNNATC 1 cut(s) 677
BseLI CCNNNNNNNGG 7 cut(s) 84, 241, 343, 1322, 2231, 2360, 2963
BseMI GCAATG 2 cut(s) 118, 2145
BseNI ACTGG 8 cut(s) 487, 787, 964, 1003, 2062, 2174, 2835, 3046
BseRI GAGGAG 2 cut(s) 23, 2657
BseSI GKGCMC 2 cut(s) 1660, 2524
BseYI CCCAGC 1 cut(s) 2353
BshFI GGCC 4 cut(s) 1536, 2522, 2748, 3013
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 3 cut(s) 1660, 2241, 2854
BsiSI CCGG 3 cut(s) 1193, 2928, 3010
BslFI GGGAC 1 cut(s) 2940
BslI CCNNNNNNNGG 7 cut(s) 84, 241, 343, 1322, 2231, 2360, 2963
BsmAI GTCTC 6 cut(s) 304, 322, 439, 1143, 2526, 3032
BsmBI CGTCTC 1 cut(s) 2526
BsmFI GGGAC 1 cut(s) 2940
BsmI GAATGC 2 cut(s) 599, 1765
BsnI GGCC 4 cut(s) 1536, 2522, 2748, 3013
Bso31I GGTCTC 1 cut(s) 322
Bsp120I GGGCCC 1 cut(s) 2520
Bsp1286I GDGCHC 4 cut(s) 1660, 2241, 2524, 2854
Bsp1407I TGTACA 1 cut(s) 2590
Bsp1720I GCTNAGC 2 cut(s) 70, 1491
Bsp19I CCATGG 2 cut(s) 534, 2916
BspACI CCGC 5 cut(s) 1316, 1578, 2140, 2143, 2846
BspANI GGCC 4 cut(s) 1536, 2522, 2748, 3013
BspHI TCATGA 4 cut(s) 40, 237, 847, 2604
BspLI GGNNCC 5 cut(s) 208, 757, 1407, 2522, 2956
BspMAI CTGCAG 2 cut(s) 1063, 2572
BspPI GGATC 8 cut(s) 96, 283, 1009, 1307, 1826, 1980, 2317, 2344
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 1 cut(s) 1990
BspTNI GGTCTC 1 cut(s) 322
BsrDI GCAATG 2 cut(s) 118, 2145
BsrFI RCCGGY 1 cut(s) 3009
BsrGI TGTACA 1 cut(s) 2590
BsrI ACTGG 8 cut(s) 487, 787, 964, 1003, 2062, 2174, 2835, 3046
BssAI RCCGGY 1 cut(s) 3009
BssECI CCNNGG 7 cut(s) 534, 703, 912, 1625, 2247, 2326, 2916
BssSI CACGAG 1 cut(s) 2358
BssT1I CCWWGG 5 cut(s) 534, 912, 1625, 2326, 2916
Bst2BI CACGAG 1 cut(s) 2358
Bst2UI CCWGG 4 cut(s) 96, 338, 371, 2248
Bst4CI ACNGT 8 cut(s) 244, 517, 769, 1285, 1726, 1753, 1944, 2689
Bst6I CTCTTC 3 cut(s) 54, 1467, 2703
BstAFI CTTAAG 1 cut(s) 1990
BstAPI GCANNNNNTGC 4 cut(s) 665, 1046, 1664, 2486
BstAUI TGTACA 1 cut(s) 2590
BstC8I GCNNGC 8 cut(s) 570, 1320, 1497, 1580, 1865, 2383, 2650, 2869
BstDSI CCRYGG 3 cut(s) 534, 703, 2916
BstF5I GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BstHHI GCGC 1 cut(s) 2621
BstMAI GTCTC 6 cut(s) 304, 322, 439, 1143, 2526, 3032
BstNI CCWGG 4 cut(s) 96, 338, 371, 2248
BstSCI CCNGG 4 cut(s) 94, 336, 369, 2246
BstSFI CTRYAG 3 cut(s) 1059, 2193, 2568
BstSLI GKGCMC 2 cut(s) 1660, 2524
BstV2I GAAGAC 2 cut(s) 1908, 2762
BstX2I RGATCY 3 cut(s) 275, 1001, 1831
BstYI RGATCY 3 cut(s) 275, 1001, 1831
Bsu36I CCTNAGG 2 cut(s) 1530, 1836
BsuI GTATCC 1 cut(s) 1238
BsuRI GGCC 4 cut(s) 1536, 2522, 2748, 3013
BtgI CCRYGG 3 cut(s) 534, 703, 2916
BtsCI GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BtsIMutI CAGTG 7 cut(s) 480, 513, 1467, 1758, 2043, 2055, 2788
Cac8I GCNNGC 8 cut(s) 570, 1320, 1497, 1580, 1865, 2383, 2650, 2869
CaiI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2381
CciI TCATGA 4 cut(s) 40, 237, 847, 2604
CfoI GCGC 1 cut(s) 2621
Cfr10I RCCGGY 1 cut(s) 3009
Cfr13I GGNCC 6 cut(s) 756, 1534, 2520, 2521, 2747, 2954
CseI GACGC 3 cut(s) 2499, 2543, 2675
Csp6I GTAC 4 cut(s) 971, 1749, 2591, 3045
CspCI CAANNNNNGTGG 2 cut(s) 2044, 2079
CviQI GTAC 4 cut(s) 971, 1749, 2591, 3045
DrdI GACNNNNNNGTC 2 cut(s) 1547, 1947
DseDI GACNNNNNNGTC 2 cut(s) 1547, 1947
EaeI YGGCCR 1 cut(s) 3011
Eam1104I CTCTTC 3 cut(s) 54, 1467, 2703
EarI CTCTTC 3 cut(s) 54, 1467, 2703
EciI GGCGGA 1 cut(s) 2129
Ecl136II GAGCTC 1 cut(s) 2852
Eco130I CCWWGG 5 cut(s) 534, 912, 1625, 2326, 2916
Eco24I GRGCYC 2 cut(s) 2524, 2854
Eco31I GGTCTC 1 cut(s) 322
Eco32I GATATC 1 cut(s) 2337
Eco47I GGWCC 2 cut(s) 756, 2954
Eco53kI GAGCTC 1 cut(s) 2852
Eco57I CTGAAG 2 cut(s) 1491, 2727
Eco81I CCTNAGG 2 cut(s) 1530, 1836
EcoICRI GAGCTC 1 cut(s) 2852
EcoO109I RGGNCCY 4 cut(s) 1534, 2520, 2521, 2747
EcoRII CCWGG 4 cut(s) 94, 336, 369, 2246
EcoRV GATATC 1 cut(s) 2337
EcoT14I CCWWGG 5 cut(s) 534, 912, 1625, 2326, 2916
EcoT22I ATGCAT 1 cut(s) 1034
EcoT38I GRGCYC 2 cut(s) 2524, 2854
ErhI CCWWGG 5 cut(s) 534, 912, 1625, 2326, 2916
Esp3I CGTCTC 1 cut(s) 2526
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 1 cut(s) 2940
FauI CCCGC 2 cut(s) 1571, 2839
FauNDI CATATG 2 cut(s) 907, 2092
FbaI TGATCA 1 cut(s) 2778
FblI GTMKAC 1 cut(s) 2826
FokI GGATG 6 cut(s) 397, 685, 1208, 1408, 1469, 1655
FriOI GRGCYC 2 cut(s) 2524, 2854
FspBI CTAG 6 cut(s) 804, 1233, 2108, 2525, 2540, 2858
GlaI GCGC 1 cut(s) 2620
GsaI CCCAGC 1 cut(s) 2357
GsuI CTGGAG 2 cut(s) 353, 504
HaeIII GGCC 4 cut(s) 1536, 2522, 2748, 3013
HapII CCGG 3 cut(s) 1193, 2928, 3010
HgaI GACGC 3 cut(s) 2499, 2543, 2675
HhaI GCGC 1 cut(s) 2621
Hin6I GCGC 1 cut(s) 2619
HinP1I GCGC 1 cut(s) 2619
HincII GTYRAC 4 cut(s) 996, 1281, 1714, 2581
HindII GTYRAC 4 cut(s) 996, 1281, 1714, 2581
HinfI GANTC 9 cut(s) 136, 266, 1211, 1375, 1670, 1883, 2170, 2613, 2960
HpaI GTTAAC 2 cut(s) 1714, 2581
HpaII CCGG 3 cut(s) 1193, 2928, 3010
HphI GGTGA 9 cut(s) 31, 38, 521, 977, 1017, 1148, 1337, 1565, 2527
Hpy99I CGWCG 1 cut(s) 2515
HpyAV CCTTC 6 cut(s) 538, 845, 2707, 2727, 2738, 2857
HpyCH4III ACNGT 8 cut(s) 244, 517, 769, 1285, 1726, 1753, 1944, 2689
HpyCH4IV ACGT 2 cut(s) 1895, 2889
HpySE526I ACGT 2 cut(s) 1895, 2889
HspAI GCGC 1 cut(s) 2619
Ksp22I TGATCA 1 cut(s) 2778
KspAI GTTAAC 2 cut(s) 1714, 2581
LmnI GCTCC 4 cut(s) 347, 1841, 2849, 2951
MaeI CTAG 6 cut(s) 804, 1233, 2108, 2525, 2540, 2858
MaeII ACGT 2 cut(s) 1895, 2889
MaeIII GTNAC 5 cut(s) 388, 509, 1136, 2024, 3032
MfeI CAATTG 2 cut(s) 750, 2481
MflI RGATCY 3 cut(s) 275, 1001, 1831
MhlI GDGCHC 4 cut(s) 1660, 2241, 2524, 2854
MlyI GAGTC 2 cut(s) 1205, 1892
MmeI TCCRAC 4 cut(s) 529, 1237, 2509, 2653
Mph1103I ATGCAT 1 cut(s) 1034
MroXI GAANNNNTTC 2 cut(s) 135, 2612
MseI TTAA 7 cut(s) 1334, 1368, 1431, 1713, 1991, 2393, 2580
MslI CAYNNNNRTG 1 cut(s) 1027
MspA1I CMGCKG 6 cut(s) 353, 565, 860, 1490, 1570, 2567
MspCI CTTAAG 1 cut(s) 1990
MspI CCGG 3 cut(s) 1193, 2928, 3010
MspR9I CCNGG 4 cut(s) 96, 338, 371, 2248
MunI CAATTG 2 cut(s) 750, 2481
Mva1269I GAATGC 2 cut(s) 599, 1765
MvaI CCWGG 4 cut(s) 96, 338, 371, 2248
NcoI CCATGG 2 cut(s) 534, 2916
NdeI CATATG 2 cut(s) 907, 2092
NlaIV GGNNCC 5 cut(s) 208, 757, 1407, 2522, 2956
NmuCI GTSAC 4 cut(s) 388, 509, 1136, 2024
NsiI ATGCAT 1 cut(s) 1034
PagI TCATGA 4 cut(s) 40, 237, 847, 2604
PctI GAATGC 2 cut(s) 599, 1765
PdmI GAANNNNTTC 2 cut(s) 135, 2612
PfeI GAWTC 7 cut(s) 136, 266, 1375, 1670, 2170, 2613, 2960
PflFI GACNNNGTC 1 cut(s) 296
PleI GAGTC 2 cut(s) 1205, 1891
PpsI GAGTC 2 cut(s) 1205, 1891
PsiI TTATAA 5 cut(s) 593, 686, 810, 1068, 2255
Psp124BI GAGCTC 1 cut(s) 2854
Psp6I CCWGG 4 cut(s) 94, 336, 369, 2246
PspFI CCCAGC 1 cut(s) 2353
PspGI CCWGG 4 cut(s) 94, 336, 369, 2246
PspN4I GGNNCC 5 cut(s) 208, 757, 1407, 2522, 2956
PspOMI GGGCCC 1 cut(s) 2520
PspPI GGNCC 6 cut(s) 756, 1534, 2520, 2521, 2747, 2954
PstI CTGCAG 2 cut(s) 1063, 2572
PstNI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2381
PsuI RGATCY 3 cut(s) 275, 1001, 1831
PsyI GACNNNGTC 1 cut(s) 296
PvuII CAGCTG 6 cut(s) 353, 565, 860, 1490, 1570, 2567
RsaI GTAC 4 cut(s) 972, 1750, 2592, 3046
RsaNI GTAC 4 cut(s) 971, 1749, 2591, 3045
RseI CAYNNNNRTG 1 cut(s) 1027
SacI GAGCTC 1 cut(s) 2854
SaqAI TTAA 7 cut(s) 1334, 1368, 1431, 1713, 1991, 2393, 2580
Sau96I GGNCC 6 cut(s) 756, 1534, 2520, 2521, 2747, 2954
ScaI AGTACT 1 cut(s) 972
SchI GAGTC 2 cut(s) 1205, 1892
ScrFI CCNGG 4 cut(s) 96, 338, 371, 2248
SduI GDGCHC 4 cut(s) 1660, 2241, 2524, 2854
SfcI CTRYAG 3 cut(s) 1059, 2193, 2568
SinI GGWCC 2 cut(s) 756, 2954
SmiMI CAYNNNNRTG 1 cut(s) 1027
SmlI CTYRAG 2 cut(s) 1990, 2470
SmoI CTYRAG 2 cut(s) 1990, 2470
SpeI ACTAGT 2 cut(s) 803, 2857
SsiI CCGC 5 cut(s) 1316, 1578, 2140, 2143, 2846
SspI AATATT 4 cut(s) 441, 1206, 1441, 2229
SspMI CTAG 6 cut(s) 804, 1233, 2108, 2525, 2540, 2858
SstI GAGCTC 1 cut(s) 2854
StyD4I CCNGG 4 cut(s) 94, 336, 369, 2246
StyI CCWWGG 5 cut(s) 534, 912, 1625, 2326, 2916
TaaI ACNGT 8 cut(s) 244, 517, 769, 1285, 1726, 1753, 1944, 2689
TaiI ACGT 2 cut(s) 1898, 2892
TaqI TCGA 1 cut(s) 465
TatI WGTACW 3 cut(s) 970, 1748, 2590
TauI GCSGC 1 cut(s) 2145
TfiI GAWTC 7 cut(s) 136, 266, 1375, 1670, 2170, 2613, 2960
Tru1I TTAA 7 cut(s) 1334, 1368, 1431, 1713, 1991, 2393, 2580
Tru9I TTAA 7 cut(s) 1334, 1368, 1431, 1713, 1991, 2393, 2580
TscAI CASTG 7 cut(s) 487, 520, 1474, 1758, 2043, 2062, 2788
TseFI GTSAC 4 cut(s) 388, 509, 1136, 2024
Tsp45I GTSAC 4 cut(s) 388, 509, 1136, 2024
TspGWI ACGGA 2 cut(s) 1996, 2598
TspRI CASTG 7 cut(s) 487, 520, 1474, 1758, 2043, 2062, 2788
Tth111I GACNNNGTC 1 cut(s) 296
Vha464I CTTAAG 1 cut(s) 1990
VneI GTGCAC 1 cut(s) 1656
VpaK11BI GGWCC 2 cut(s) 756, 2954
XapI RAATTY 8 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999, 2931
XmiI GTMKAC 1 cut(s) 2826
XmnI GAANNNNTTC 2 cut(s) 135, 2612
XspI CTAG 6 cut(s) 804, 1233, 2108, 2525, 2540, 2858
ZrmI AGTACT 1 cut(s) 972
Zsp2I ATGCAT 1 cut(s) 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.