Rorug05G0409700

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
56563734 .. 56566143
2410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0409700.1

Sequence Viewer

Length: 1431 bp
ATGGCAGAATCAGATAATCAAAAGCCTCACGCCATCTTCATCCCCTACCCTCTCCAAGGCCATGTAATTCCATCAGTCGAGTTGGCCATCAAGCTCGCATCACGCGGCTTCAAGATCACCTTCGTCAACACCCAATCCATCCACCACCATACCTCGAAAGCGCAGCCGAAAACCGGAGCCGACCTCTTTGCCGCCGCACGTGAAGCCGGGCACGATATAGACTACACCACCGTCTCCGATGGCCTCCCCGTTGAGTTTGACCGCTCCCTCAACCACGACCAGTTCATGGCCTCTTTGTTGCACGTGTTTTCCGCGCACGTCGATGAGGTGGTCGGGAAACTTGTCAAGTCCTCGGCGAGCACCGTACCTGTTACTTGTCTGATTGCCGATACTTTCTTCGTGTGGCCGGGCAAGGTTGCTAAGAAGTTTGATCTTCTTTATGTTTCGTTTTGGACGGAGCCTGCTTTGGTTTATTCACTCTATTATCACGTTGATCTTCTTCGAAGAAATGGTCATTTTGCATGTCATGATGTGCGGGAGGACAACATAGATTACATACCTGGAGTGAAATCAATTGATCCCAGGGACATGATGTCCTATCTTCAAGAAACTGATATAACAACTGTGTGCCACCAGATCATTCTGAATGCCTTCAAGGACGTTAGAGGAGCACATTATGTCCTATGCAACACAGTGCAGGAGATCGAATCCGAGACCATCGCACCCCTCCATGGCAAGATCCCCTTCTATGCAATTGGTCCTATTTTTCCCAACAGGTTCAACAAGAGCATCGTTGCGACTAGTCTGTGGTCCGAGTCGGACTGCAGTCAGTGGCTGAACACCAAACCCAATGGCTCAGTATTGTATGTCTCATTTGGTAGCTATGCACATGTCTCCAAATGTGACCTTACAGAGATAGCTAATGGACTTGAACTCAGCAAAGTGAACTTTGTTTGGGTACTCCGGCCGGATATTGTTAGCTCGGAGGACACAGATCCGCTGCCCTCTGGCTTTAAAGAGCGGATTAGTGACCGAGCTATTATTATTCCTTGGTGCTGTCAGAAGTCGGTCTTGGCGCACCCGGCTATAGGAGGGTTTTTGACCCATTGTGGGTGGAATTCTACATTGGAAAGTATTTGGTGTGGTGTACCATTGTTGTGTTTCCCTTTACTTACTGATCAATTCACCAACAGAAAACTAATAGTTGATGATTGGAAGGTTGGGATTAATTTATGCGATCGGAAAGTGGTCAGGAGAGAGGGTGTTTCAAAGAAAGTCAACCATTTGATGGATGAGAAATCAGGGGATGAGTTCAGGAAAGCTGTTGCCAAGGTTAGGAAGACATTGGAAGATGCATCGACACCCAATGGATCATCTGAGAAAAATATGGACACTTTCATTAAGGATCTAAAGGCCAGGATTCGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

476

Amino Acids

53.4

Weight (kDa)

6.68

Isoelectric Point (pI)

31.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 12 - 226 2e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 279 - 434 3.7e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 286, 1288
AccBSI CCGCTC 2 cut(s) 264, 1021
AccII CGCG 2 cut(s) 105, 314
AciI CCGC 8 cut(s) 105, 192, 195, 262, 312, 535, 998, 1021
AclWI GGATC 5 cut(s) 572, 733, 989, 1378, 1413
AcoI YGGCCR 3 cut(s) 84, 404, 965
AcsI RAATTY 1 cut(s) 1117
AcvI CACGTG 2 cut(s) 200, 304
AfaI GTAC 3 cut(s) 366, 960, 1149
AfiI CCNNNNNNNGG 9 cut(s) 56, 173, 286, 731, 1088, 1110, 1288, 1335, 1422
AflIII ACRYGT 2 cut(s) 303, 889
AgsI TTSAA 6 cut(s) 112, 605, 655, 781, 932, 1269
AhdI GACNNNNNGTC 1 cut(s) 592
AhlI ACTAGT 1 cut(s) 800
AjiI CACGTC 1 cut(s) 319
AjnI CCWGG 3 cut(s) 559, 581, 1415
AjuI GAANNNNNNNTTGG 4 cut(s) 1055, 1087, 1109, 1141
AluBI AGCT 6 cut(s) 94, 882, 920, 981, 1037, 1322
AluI AGCT 6 cut(s) 94, 882, 920, 981, 1037, 1322
Alw21I GWGCWC 2 cut(s) 362, 673
Alw26I GTCTC 4 cut(s) 238, 707, 874, 898
AlwI GGATC 5 cut(s) 572, 733, 989, 1378, 1413
AlwNI CAGNNNCTG 1 cut(s) 835
AoxI GGCC 7 cut(s) 58, 84, 241, 288, 404, 965, 1413
ApeKI GCWGC 2 cut(s) 163, 1000
ApoI RAATTY 1 cut(s) 1117
ArsI GACNNNNNNTTYG 2 cut(s) 496, 528
AseI ATTAAT 1 cut(s) 1227
Asp700I GAANNNNTTC 1 cut(s) 650
AspLEI GCGC 3 cut(s) 163, 316, 1078
AspS9I GGNCC 2 cut(s) 758, 810
AsuC2I CCSGG 3 cut(s) 208, 408, 1082
AsuHPI GGTGA 2 cut(s) 109, 1177
AsuII TTCGAA 1 cut(s) 502
AvaII GGWCC 2 cut(s) 758, 810
BaeGI GKGCMC 1 cut(s) 213
BalI TGGCCA 1 cut(s) 86
BbrPI CACGTG 2 cut(s) 200, 304
BbsI GAAGAC 1 cut(s) 1346
Bbv12I GWGCWC 2 cut(s) 362, 673
BbvI GCAGC 2 cut(s) 175, 987
BccI CCATC 7 cut(s) 41, 79, 95, 146, 233, 725, 1282
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 3 cut(s) 561, 583, 1417
BclI TGATCA 1 cut(s) 1177
BcnI CCSGG 3 cut(s) 208, 408, 1082
BcoDI GTCTC 4 cut(s) 238, 707, 874, 898
BcuI ACTAGT 1 cut(s) 800
BfaI CTAG 1 cut(s) 801
BfmI CTRYAG 2 cut(s) 823, 1086
BisI GCNGC 5 cut(s) 106, 164, 192, 195, 1001
BlsI GCNGC 5 cut(s) 107, 165, 193, 196, 1002
Bme1390I CCNGG 6 cut(s) 208, 408, 561, 583, 1082, 1417
Bme18I GGWCC 2 cut(s) 758, 810
BmeRI GACNNNNNGTC 1 cut(s) 592
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 2 cut(s) 758, 810
BmiI GGNNCC 2 cut(s) 178, 459
BmrFI CCNGG 6 cut(s) 208, 408, 561, 583, 1082, 1417
BmsI GCATC 4 cut(s) 107, 798, 1342, 1364
BoxI GACNNNNGTC 1 cut(s) 825
BpiI GAAGAC 1 cut(s) 1346
BplI GAGNNNNNCTC 2 cut(s) 168, 200
BpmI CTGGAG 1 cut(s) 582
Bpu14I TTCGAA 1 cut(s) 502
BpuMI CCSGG 3 cut(s) 208, 408, 1082
BsaAI YACGTR 2 cut(s) 200, 304
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 7 cut(s) 55, 351, 581, 582, 730, 1049, 1329
BsaWI WCCGGW 1 cut(s) 173
BsaXI ACNNNNNCTCC 2 cut(s) 1246, 1276
Bsc4I CCNNNNNNNGG 9 cut(s) 56, 173, 286, 731, 1088, 1110, 1288, 1335, 1422
Bse1I ACTGG 1 cut(s) 280
BseBI CCWGG 3 cut(s) 561, 583, 1417
BseDI CCNNGG 7 cut(s) 55, 351, 581, 582, 730, 1049, 1329
BseGI GGATG 4 cut(s) 39, 138, 1297, 1312
BseLI CCNNNNNNNGG 9 cut(s) 56, 173, 286, 731, 1088, 1110, 1288, 1335, 1422
BseMII CTCAG 3 cut(s) 870, 949, 1368
BseNI ACTGG 1 cut(s) 280
BseRI GAGGAG 1 cut(s) 681
BseSI GKGCMC 1 cut(s) 213
BseX3I CGGCCG 1 cut(s) 965
BseXI GCAGC 2 cut(s) 175, 987
BsgI GTGCAG 1 cut(s) 716
Bsh1236I CGCG 2 cut(s) 105, 314
Bsh1285I CGRYCG 2 cut(s) 968, 1240
BshFI GGCC 7 cut(s) 60, 86, 243, 290, 406, 967, 1415
BsiEI CGRYCG 2 cut(s) 968, 1240
BsiHKAI GWGCWC 2 cut(s) 362, 673
BsiSI CCGG 6 cut(s) 174, 207, 407, 964, 968, 1082
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 9 cut(s) 56, 173, 286, 731, 1088, 1110, 1288, 1335, 1422
BsmAI GTCTC 4 cut(s) 238, 707, 874, 898
BsmBI CGTCTC 1 cut(s) 238
BsmFI GGGAC 1 cut(s) 599
BsmI GAATGC 1 cut(s) 652
BsnI GGCC 7 cut(s) 60, 86, 243, 290, 406, 967, 1415
Bso31I GGTCTC 1 cut(s) 707
Bsp119I TTCGAA 1 cut(s) 502
Bsp1286I GDGCHC 3 cut(s) 213, 362, 673
Bsp19I CCATGG 1 cut(s) 730
BspACI CCGC 8 cut(s) 105, 192, 195, 262, 312, 535, 998, 1021
BspANI GGCC 7 cut(s) 60, 86, 243, 290, 406, 967, 1415
BspCNI CTCAG 3 cut(s) 869, 948, 1369
BspFNI CGCG 2 cut(s) 105, 314
BspHI TCATGA 1 cut(s) 526
BspLI GGNNCC 2 cut(s) 178, 459
BspMAI CTGCAG 1 cut(s) 827
BspPI GGATC 5 cut(s) 572, 733, 989, 1378, 1413
BspT104I TTCGAA 1 cut(s) 502
BspTNI GGTCTC 1 cut(s) 707
BsrBI CCGCTC 2 cut(s) 264, 1021
BsrI ACTGG 1 cut(s) 280
BssECI CCNNGG 7 cut(s) 55, 351, 581, 582, 730, 1049, 1329
BssT1I CCWWGG 4 cut(s) 55, 730, 1049, 1329
Bst2UI CCWGG 3 cut(s) 561, 583, 1417
Bst4CI ACNGT 4 cut(s) 232, 364, 625, 694
BstBAI YACGTR 2 cut(s) 200, 304
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 3 cut(s) 96, 358, 462
BstDEI CTNAG 4 cut(s) 420, 856, 935, 1377
BstDSI CCRYGG 1 cut(s) 730
BstENI CCTNNNNNAGG 1 cut(s) 54
BstF5I GGATG 4 cut(s) 39, 138, 1297, 1312
BstFNI CGCG 2 cut(s) 105, 314
BstHHI GCGC 3 cut(s) 163, 316, 1078
BstMAI GTCTC 4 cut(s) 238, 707, 874, 898
BstMCI CGRYCG 2 cut(s) 968, 1240
BstMWI GCNNNNNNNGC 2 cut(s) 203, 1082
BstNI CCWGG 3 cut(s) 561, 583, 1417
BstNSI RCATGY 2 cut(s) 525, 893
BstPAI GACNNNNGTC 1 cut(s) 825
BstSCI CCNGG 6 cut(s) 206, 406, 559, 581, 1080, 1415
BstSFI CTRYAG 2 cut(s) 823, 1086
BstSLI GKGCMC 1 cut(s) 213
BstUI CGCG 2 cut(s) 105, 314
BstV1I GCAGC 2 cut(s) 175, 987
BstV2I GAAGAC 1 cut(s) 1346
BstX2I RGATCY 3 cut(s) 738, 994, 1405
BstYI RGATCY 3 cut(s) 738, 994, 1405
BstZI CGGCCG 1 cut(s) 965
BsuRI GGCC 7 cut(s) 60, 86, 243, 290, 406, 967, 1415
BtgI CCRYGG 1 cut(s) 730
BtgZI GCGATG 1 cut(s) 703
BtrI CACGTC 1 cut(s) 319
BtsCI GGATG 4 cut(s) 39, 138, 1297, 1312
BtsIMutI CAGTG 2 cut(s) 699, 836
Cac8I GCNNGC 3 cut(s) 96, 358, 462
CaiI CAGNNNCTG 1 cut(s) 835
CciI TCATGA 1 cut(s) 526
CfoI GCGC 3 cut(s) 163, 316, 1078
Cfr13I GGNCC 2 cut(s) 758, 810
Csp6I GTAC 3 cut(s) 365, 959, 1148
CviAII CATG 7 cut(s) 62, 286, 522, 527, 589, 731, 890
CviQI GTAC 3 cut(s) 365, 959, 1148
DdeI CTNAG 4 cut(s) 420, 856, 935, 1377
DraI TTTAAA 1 cut(s) 1015
DriI GACNNNNNGTC 1 cut(s) 592
EaeI YGGCCR 3 cut(s) 84, 404, 965
EagI CGGCCG 1 cut(s) 965
Eam1105I GACNNNNNGTC 1 cut(s) 592
EclXI CGGCCG 1 cut(s) 965
Eco130I CCWWGG 4 cut(s) 55, 730, 1049, 1329
Eco31I GGTCTC 1 cut(s) 707
Eco47I GGWCC 2 cut(s) 758, 810
Eco52I CGGCCG 1 cut(s) 965
Eco72I CACGTG 2 cut(s) 200, 304
EcoNI CCTNNNNNAGG 1 cut(s) 54
EcoRI GAATTC 1 cut(s) 1117
EcoRII CCWGG 3 cut(s) 559, 581, 1415
EcoT14I CCWWGG 4 cut(s) 55, 730, 1049, 1329
EcoT22I ATGCAT 1 cut(s) 1357
ErhI CCWWGG 4 cut(s) 55, 730, 1049, 1329
Esp3I CGTCTC 1 cut(s) 238
FaeI CATG 7 cut(s) 65, 289, 525, 530, 592, 734, 893
FalI AAGNNNNNCTT 6 cut(s) 104, 136, 728, 760, 1055, 1087
FaqI GGGAC 1 cut(s) 599
FatI CATG 7 cut(s) 61, 285, 521, 526, 588, 730, 889
FauI CCCGC 1 cut(s) 528
FbaI TGATCA 1 cut(s) 1177
Fnu4HI GCNGC 5 cut(s) 106, 164, 192, 195, 1001
FokI GGATG 4 cut(s) 26, 125, 1304, 1319
Fsp4HI GCNGC 5 cut(s) 106, 164, 192, 195, 1001
FspBI CTAG 1 cut(s) 801
GlaI GCGC 3 cut(s) 162, 315, 1077
GluI GCNGC 5 cut(s) 106, 164, 192, 195, 1001
GsuI CTGGAG 1 cut(s) 582
HaeIII GGCC 7 cut(s) 60, 86, 243, 290, 406, 967, 1415
HapII CCGG 6 cut(s) 174, 207, 407, 964, 968, 1082
HhaI GCGC 3 cut(s) 163, 316, 1078
Hin1II CATG 7 cut(s) 65, 289, 525, 530, 592, 734, 893
Hin6I GCGC 3 cut(s) 161, 314, 1076
HinP1I GCGC 3 cut(s) 161, 314, 1076
HincII GTYRAC 2 cut(s) 127, 1279
HindII GTYRAC 2 cut(s) 127, 1279
HinfI GANTC 4 cut(s) 8, 707, 815, 1420
HpaII CCGG 6 cut(s) 174, 207, 407, 964, 968, 1082
HphI GGTGA 2 cut(s) 109, 1177
Hpy166II GTNNAC 4 cut(s) 127, 946, 1148, 1279
Hpy188III TCNNGA 6 cut(s) 112, 334, 527, 605, 1252, 1315
Hpy8I GTNNAC 4 cut(s) 127, 946, 1148, 1279
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 4 cut(s) 130, 661, 754, 1210
HpyCH4III ACNGT 4 cut(s) 232, 364, 625, 694
HpyCH4IV ACGT 5 cut(s) 199, 303, 318, 489, 660
HpyCH4V TGCA 8 cut(s) 301, 521, 687, 697, 752, 825, 887, 1355
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 1082
HpyF3I CTNAG 4 cut(s) 420, 856, 935, 1377
HpySE526I ACGT 5 cut(s) 199, 303, 318, 489, 660
Hsp92II CATG 7 cut(s) 65, 289, 525, 530, 592, 734, 893
HspAI GCGC 3 cut(s) 161, 314, 1076
Ksp22I TGATCA 1 cut(s) 1177
LmnI GCTCC 4 cut(s) 176, 269, 457, 668
Lsp1109I GCAGC 2 cut(s) 175, 987
LweI GCATC 4 cut(s) 107, 798, 1342, 1364
MaeI CTAG 1 cut(s) 801
MaeII ACGT 5 cut(s) 199, 303, 318, 489, 660
MaeIII GTNAC 3 cut(s) 370, 902, 1028
MbiI CCGCTC 2 cut(s) 264, 1021
MboII GAAGA 9 cut(s) 28, 388, 425, 488, 491, 516, 593, 1351, 1361
MfeI CAATTG 2 cut(s) 573, 753
MflI RGATCY 3 cut(s) 738, 994, 1405
MhlI GDGCHC 3 cut(s) 213, 362, 673
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 6 cut(s) 66, 573, 753, 1117, 1181, 1228
MluNI TGGCCA 1 cut(s) 86
MlyI GAGTC 1 cut(s) 824
MmeI TCCRAC 1 cut(s) 798
Mox20I TGGCCA 1 cut(s) 86
Mph1103I ATGCAT 1 cut(s) 1357
MroXI GAANNNNTTC 1 cut(s) 650
MscI TGGCCA 1 cut(s) 86
MseI TTAA 3 cut(s) 1014, 1227, 1401
MslI CAYNNNNRTG 2 cut(s) 321, 1156
Msp20I TGGCCA 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 1000
MspI CCGG 6 cut(s) 174, 207, 407, 964, 968, 1082
MspR9I CCNGG 6 cut(s) 208, 408, 561, 583, 1082, 1417
MunI CAATTG 2 cut(s) 573, 753
Mva1269I GAATGC 1 cut(s) 652
MvaI CCWGG 3 cut(s) 561, 583, 1417
MvnI CGCG 2 cut(s) 105, 314
MwoI GCNNNNNNNGC 2 cut(s) 203, 1082
NciI CCSGG 3 cut(s) 208, 408, 1082
NcoI CCATGG 1 cut(s) 730
NlaIII CATG 7 cut(s) 65, 289, 525, 530, 592, 734, 893
NlaIV GGNNCC 2 cut(s) 178, 459
NmeAIII GCCGAG 1 cut(s) 332
NmuCI GTSAC 2 cut(s) 902, 1028
NsiI ATGCAT 1 cut(s) 1357
NspI RCATGY 2 cut(s) 525, 893
NspV TTCGAA 1 cut(s) 502
PagI TCATGA 1 cut(s) 526
PasI CCCWGGG 1 cut(s) 582
PciI ACATGT 1 cut(s) 889
PctI GAATGC 1 cut(s) 652
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 3 cut(s) 8, 707, 1420
PflMI CCANNNNNTGG 2 cut(s) 286, 1288
PkrI GCNGC 5 cut(s) 107, 165, 193, 196, 1002
Ple19I CGATCG 1 cut(s) 1240
PleI GAGTC 1 cut(s) 823
PmaCI CACGTG 2 cut(s) 200, 304
PmlI CACGTG 2 cut(s) 200, 304
PpsI GAGTC 1 cut(s) 823
Ppu21I YACGTR 2 cut(s) 200, 304
PscI ACATGT 1 cut(s) 889
PshAI GACNNNNGTC 1 cut(s) 825
PshBI ATTAAT 1 cut(s) 1227
Psp6I CCWGG 3 cut(s) 559, 581, 1415
PspCI CACGTG 2 cut(s) 200, 304
PspGI CCWGG 3 cut(s) 559, 581, 1415
PspN4I GGNNCC 2 cut(s) 178, 459
PspPI GGNCC 2 cut(s) 758, 810
PstI CTGCAG 1 cut(s) 827
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 3 cut(s) 738, 994, 1405
PvuI CGATCG 1 cut(s) 1240
RsaI GTAC 3 cut(s) 366, 960, 1149
RsaNI GTAC 3 cut(s) 365, 959, 1148
RseI CAYNNNNRTG 2 cut(s) 321, 1156
SaqAI TTAA 3 cut(s) 1014, 1227, 1401
SatI GCNGC 5 cut(s) 106, 164, 192, 195, 1001
Sau96I GGNCC 2 cut(s) 758, 810
SchI GAGTC 1 cut(s) 824
ScrFI CCNGG 6 cut(s) 208, 408, 561, 583, 1082, 1417
SduI GDGCHC 3 cut(s) 213, 362, 673
SfaNI GCATC 4 cut(s) 107, 798, 1342, 1364
SfcI CTRYAG 2 cut(s) 823, 1086
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 2 cut(s) 758, 810
SmiMI CAYNNNNRTG 2 cut(s) 321, 1156
SpeI ACTAGT 1 cut(s) 800
Sse9I AATT 6 cut(s) 66, 573, 753, 1117, 1181, 1228
SsiI CCGC 8 cut(s) 105, 192, 195, 262, 312, 535, 998, 1021
SspMI CTAG 1 cut(s) 801
StyD4I CCNGG 6 cut(s) 206, 406, 559, 581, 1080, 1415
StyI CCWWGG 4 cut(s) 55, 730, 1049, 1329
TaaI ACNGT 4 cut(s) 232, 364, 625, 694
TaiI ACGT 5 cut(s) 202, 306, 321, 492, 663
TaqI TCGA 6 cut(s) 78, 155, 321, 502, 705, 1358
TaqII GACCGA 2 cut(s) 1047, 1057
TasI AATT 6 cut(s) 66, 573, 753, 1117, 1181, 1228
TauI GCSGC 3 cut(s) 108, 194, 197
TfiI GAWTC 3 cut(s) 8, 707, 1420
Tru1I TTAA 3 cut(s) 1014, 1227, 1401
Tru9I TTAA 3 cut(s) 1014, 1227, 1401
TscAI CASTG 2 cut(s) 699, 836
TseFI GTSAC 2 cut(s) 902, 1028
TseI GCWGC 2 cut(s) 163, 1000
Tsp45I GTSAC 2 cut(s) 902, 1028
TspDTI ATGAA 3 cut(s) 28, 274, 1387
TspGWI ACGGA 1 cut(s) 470
TspRI CASTG 2 cut(s) 699, 836
Van91I CCANNNNNTGG 2 cut(s) 286, 1288
VpaK11BI GGWCC 2 cut(s) 758, 810
VspI ATTAAT 1 cut(s) 1227
XagI CCTNNNNNAGG 1 cut(s) 54
XapI RAATTY 1 cut(s) 1117
XceI RCATGY 2 cut(s) 525, 893
XmnI GAANNNNTTC 1 cut(s) 650
XspI CTAG 1 cut(s) 801
Zsp2I ATGCAT 1 cut(s) 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.