Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000116

Physical Location & Seq

Genomic Coordinates Forward (+)

24672712 .. 24675825

Gene Structure 3114 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g21622.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGAATGTTATTGGAAGATAAACGTTACAGGAATAGATACAACGGTTGGTGAGCATGGAACTCAACTATCTGGAGGGCAAAAGCAAAGAGTTGCTATAGCTAGAGCAATTTTGAAGAACCCTAGAATTCTGCTTTTAGATGAAGCAACAAGCGCTCTTGACACAGAATCTGAGAGAATTGTGCAGGAGGCACTTGACCGAGTAATGATTAACCGGACTACTGTCATAATAGCCCACCGCTTGAGCACAATAATGAATGTTGACACCATTGCTGTGATACATCAAGGAACAATTGCTGAGAAAGGCCCACATTCTGAGCTAATCAAGGATCCCAATGGAGCATACAACAGGCTTATAAGGTTGCAAGAAACTACTTTTGTGTCAGAAGACTTGGAACATACTGGTCGAAATTTTGATAAATCATCTCCAAGATGTAGAAGTCCTATCTCGTTATCAATCTCAAATGGTATTCCCACTGCAAGCGGTATTCTTGAAACAACACCAGGAGAACCTGATGTTCCTGCTTCAATACCATCTAAAGGGCCTCCAAGAGTCCCTCTTCGCCGCCTTGCTTACCTGAACAAGCCAGAGATCCCAATGCTACTTCTAGGTACTATAGGTGCAGCAGTCAATGGGTTTTGGGCATCAATCTTTGTTGTTCTTGGAGTGGTATCTTTCTTGGCACATTCATCAAGAGCATACCTCTTTGCCGTGGCGGGTGGCAGTTTAATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGAGCACTCAAGTGGTGCAATTGGGGCAAGGCTTTCTACAGATGCAGCCTCTTTGAGAGGTCTTGTTGGAGATGCTCTTGGTTTCTTTGTTCAGAATACAGCAACTGCAATTGCGGGGATGATTATTGCTTTTGGTGCAAATTGGCAAATTTCTCTTGTAATCCTTGTTTTGATACCTCTGTTAGGAATAAACGGATATTTTCAGGTCAAGTACATGAAAGGTTTCGGTGCAGAAGCACAGAAAGTTTATGAGGACGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAGTTGCCTCCTTTTGTGCTGAAGAGTTGATGATTGACTTGTACAAGAAAAAATGTGAAGGCCCTATCAGGACAGGGATAAGACAAGGTTTAATTTCTGGTATAGGTTTTGGTGTATCACTCTTTTTACAGTTTTCATCATTTGGCTTAATTTTCTATACTGGAGGTCTACTTGTTCAAGCAGGCAAGACAACATTCACTGATGTTTTCAGGGCTTTCTTTGCTCTGACTATTGCCTCTCTTGGACTCGCTCAGTCGAGCTCCCTAGCACCTGATATTAGTAAAGGAATGAGCTCTGCTGCTTCCATATTCACAATTCTTGAAAGGAAATCAAAAATAGATTCTAGTGATAACTCGGGCATGACAATTGAGAATGTGAAGGGAGAAATTGAATTTCACCATGTCAGTTTCAATTATCCTAGTAGACCTGACGTGCCGGTTTTAAACGATCTTTGCTTAACCATTAGTCGTGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGAAAATCAACAGTGGTCTCTTTGATCCAGAGATTTTACAACCCCAGCTCTGGTCATATTACATTGGATGGAATCGAAATTGAGAAATTACAGTTGAGGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGAAGGAGAGGCAACCGAGGCTGAAATTATAGCTGCAGCAAAAATGGCAAATGCAGACAAGTTCATTAGTAGTTTACAACATGGTTATGATACAATTACTGGAGAGCGAGGGGTCCAATTATCGGGTGGACAGAAGCAAAGAGTTGCTATTGCAAGAGCTATTATGAAGGCACCAAAGATATTATTACTAGATGAAGCGACAAGTGCTCTTGACGCTGAATCAGAACGCGTGGTTCAAGATGCATTGGACCGAGTTATGGTGGATCGAACTGCAATTGTGATTGCTCACCGGTTATCCACAATCAAGGGTGCAGATGTAATTGCTGTGGTGAAAAATGGAGCTGTTGCGGAGAAAGGAAAGCATGAAACTTTGATGAATATCAGTAATGGCATATATGCTTCTTTGATAGCATTGCATGTAAGTGCCTCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0009914 GO:0009926 GO:0009966 GO:0010315 GO:0010329 GO:0010540 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0022857 GO:0023051 GO:0030054 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0071944 GO:0080161

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

739

Amino Acids

79.45

Weight (kDa)

7.24

Isoelectric Point (pI)

30.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	13 - 51	3.9e-11	ABC transporter
ABC_membrane	PF00664	213 - 444	2e-48	ABC transporter transmembrane region
ABC_tran	PF00005	512 - 662	1.5e-34	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca	FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica	MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica	Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis	pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis	RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata	RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora	Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa	Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha	Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana	Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	356
AccB1I	GGYRCC	1 cut(s)	1951
AccI	GTMKAC	2 cut(s)	1261, 1516
AccII	CGCG	1 cut(s)	2010
AciI	CCGC	6 cut(s)	238, 483, 565, 716, 911, 2129
AclI	AACGTT	1 cut(s)	24
AclWI	GGATC	5 cut(s)	323, 336, 586, 1618, 2052
AcsI	RAATTY	4 cut(s)	126, 409, 945, 1484
AcuI	CTGAAG	1 cut(s)	1134
AfaI	GTAC	3 cut(s)	613, 1010, 1136
AfeI	AGCGCT	1 cut(s)	154
AfiI	CCNNNNNNNGG	5 cut(s)	539, 980, 1649, 1903, 2038
AflIII	ACRYGT	1 cut(s)	2008
AgeI	ACCGGT	1 cut(s)	2070
AgsI	TTSAA	8 cut(s)	115, 494, 528, 1271, 1415, 1484, 1504, 2018
AjiI	CACGTC	1 cut(s)	1525
AjnI	CCWGG	2 cut(s)	502, 1728
AleI	CACNNNNGTG	1 cut(s)	807
Alw21I	GWGCWC	5 cut(s)	248, 804, 1355, 1388, 1990
Alw26I	GTCTC	2 cut(s)	1621, 1699
AlwI	GGATC	5 cut(s)	323, 336, 586, 1618, 2052
AlwNI	CAGNNNCTG	2 cut(s)	170, 902
Ama87I	CYCGRG	1 cut(s)	1447
Aor51HI	AGCGCT	1 cut(s)	154
AoxI	GGCC	3 cut(s)	304, 542, 1153
ApeKI	GCWGC	5 cut(s)	623, 842, 1391, 1814, 1817
ApoI	RAATTY	4 cut(s)	126, 409, 945, 1484
AsiGI	ACCGGT	1 cut(s)	2070
Asp700I	GAANNNNTTC	1 cut(s)	1019
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	5 cut(s)	305, 542, 1154, 1894, 2029
AsuHPI	GGTGA	6 cut(s)	62, 1481, 1598, 1735, 2060, 2122
AvaI	CYCGRG	1 cut(s)	1447
AvaII	GGWCC	2 cut(s)	1894, 2029
BaeI	ACNNNNGTAYC	4 cut(s)	30, 63, 962, 995
BamHI	GGATCC	1 cut(s)	328
BanI	GGYRCC	1 cut(s)	1951
BanII	GRGCYC	2 cut(s)	1355, 1388
BarI	GAAGNNNNNNTAC	2 cut(s)	752, 784
BbsI	GAAGAC	1 cut(s)	393
Bbv12I	GWGCWC	5 cut(s)	248, 804, 1355, 1388, 1990
BbvI	GCAGC	5 cut(s)	635, 854, 1378, 1801, 1829
BccI	CCATC	2 cut(s)	541, 1661
BceAI	ACGGC	1 cut(s)	695
BcgI	CGANNNNNNTGC	2 cut(s)	732, 766
BciT130I	CCWGG	2 cut(s)	504, 1730
BcoDI	GTCTC	2 cut(s)	1621, 1699
BfaI	CTAG	8 cut(s)	102, 123, 608, 1068, 1358, 1437, 1512, 1970
BfmI	CTRYAG	4 cut(s)	96, 615, 834, 1815
BfoI	RGCGCY	1 cut(s)	156
BisI	GCNGC	6 cut(s)	565, 624, 843, 1392, 1815, 1818
BlpI	GCTNAGC	1 cut(s)	798
BlsI	GCNGC	6 cut(s)	566, 625, 844, 1393, 1816, 1819
Bme1390I	CCNGG	2 cut(s)	504, 1730
Bme18I	GGWCC	2 cut(s)	1894, 2029
BmeT110I	CYCGRG	1 cut(s)	1447
BmgBI	CACGTC	1 cut(s)	1525
BmgT120I	GGNCC	5 cut(s)	305, 542, 1154, 1894, 2029
BmiI	GGNNCC	4 cut(s)	330, 1734, 1895, 1953
BmrFI	CCNGG	2 cut(s)	504, 1730
BmsI	GCATC	5 cut(s)	653, 829, 859, 1063, 2011
BoxI	GACNNNNGTC	1 cut(s)	221
BpiI	GAAGAC	1 cut(s)	393
BplI	GAGNNNNNCTC	2 cut(s)	687, 719
BpmI	CTGGAG	3 cut(s)	93, 1275, 1902
Bpu1102I	GCTNAGC	1 cut(s)	798
BpuEI	CTTGAG	2 cut(s)	262, 790
BsaBI	GATNNNNATC	1 cut(s)	2159
BsaI	GGTCTC	1 cut(s)	1621
BsaJI	CCNNGG	2 cut(s)	711, 1797
BsaWI	WCCGGW	2 cut(s)	213, 2070
Bsc4I	CCNNNNNNNGG	5 cut(s)	539, 980, 1649, 1903, 2038
Bse118I	RCCGGY	2 cut(s)	1528, 2070
Bse1I	ACTGG	3 cut(s)	406, 1258, 1885
Bse3DI	GCAATG	4 cut(s)	267, 753, 1767, 2192
Bse8I	GATNNNNATC	1 cut(s)	2159
BseBI	CCWGG	2 cut(s)	504, 1730
BseDI	CCNNGG	2 cut(s)	711, 1797
BseGI	GGATG	2 cut(s)	921, 1672
BseJI	GATNNNNATC	1 cut(s)	2159
BseLI	CCNNNNNNNGG	5 cut(s)	539, 980, 1649, 1903, 2038
BseMI	GCAATG	4 cut(s)	267, 753, 1767, 2192
BseMII	CTCAG	5 cut(s)	162, 288, 306, 789, 1358
BseNI	ACTGG	3 cut(s)	406, 1258, 1885
BseXI	GCAGC	5 cut(s)	635, 854, 1378, 1801, 1829
BseYI	CCCAGC	1 cut(s)	1643
BsgI	GTGCAG	4 cut(s)	203, 642, 1047, 2112
Bsh1236I	CGCG	1 cut(s)	2010
BshFI	GGCC	3 cut(s)	306, 544, 1155
BshNI	GGYRCC	1 cut(s)	1951
BshTI	ACCGGT	1 cut(s)	2070
BsiHKAI	GWGCWC	5 cut(s)	248, 804, 1355, 1388, 1990
BsiHKCI	CYCGRG	1 cut(s)	1447
BsiSI	CCGG	3 cut(s)	214, 1529, 2071
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	5 cut(s)	539, 980, 1649, 1903, 2038
BsmAI	GTCTC	2 cut(s)	1621, 1699
BsmFI	GGGAC	1 cut(s)	539
BsnI	GGCC	3 cut(s)	306, 544, 1155
Bso31I	GGTCTC	1 cut(s)	1621
BsoBI	CYCGRG	1 cut(s)	1447
Bsp1286I	GDGCHC	5 cut(s)	248, 804, 1355, 1388, 1990
Bsp1407I	TGTACA	1 cut(s)	1134
Bsp143I	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
Bsp1720I	GCTNAGC	1 cut(s)	798
BspACI	CCGC	6 cut(s)	238, 483, 565, 716, 911, 2129
BspANI	GGCC	3 cut(s)	306, 544, 1155
BspCNI	CTCAG	5 cut(s)	163, 289, 307, 790, 1357
BspFNI	CGCG	1 cut(s)	2010
BspLI	GGNNCC	4 cut(s)	330, 1734, 1895, 1953
BspMAI	CTGCAG	1 cut(s)	1819
BspPI	GGATC	5 cut(s)	323, 336, 586, 1618, 2052
BspT107I	GGYRCC	1 cut(s)	1951
BspTNI	GGTCTC	1 cut(s)	1621
BsrDI	GCAATG	4 cut(s)	267, 753, 1767, 2192
BsrFI	RCCGGY	2 cut(s)	1528, 2070
BsrGI	TGTACA	1 cut(s)	1134
BsrI	ACTGG	3 cut(s)	406, 1258, 1885
BssAI	RCCGGY	2 cut(s)	1528, 2070
BssECI	CCNNGG	2 cut(s)	711, 1797
BssMI	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
Bst2UI	CCWGG	2 cut(s)	504, 1730
Bst4CI	ACNGT	6 cut(s)	46, 223, 1096, 1224, 1612, 1692
Bst6I	CTCTTC	3 cut(s)	564, 730, 1110
BstAUI	TGTACA	1 cut(s)	1134
BstC8I	GCNNGC	3 cut(s)	481, 1057, 1276
BstDEI	CTNAG	5 cut(s)	171, 297, 315, 798, 1344
BstDSI	CCRYGG	1 cut(s)	711
BstENI	CCTNNNNNAGG	1 cut(s)	978
BstF5I	GGATG	2 cut(s)	921, 1672
BstFNI	CGCG	1 cut(s)	2010
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	1 cut(s)	155
BstKTI	GATC	5 cut(s)	331, 594, 1543, 1626, 2047
BstMAI	GTCTC	2 cut(s)	1621, 1699
BstMBI	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
BstNI	CCWGG	2 cut(s)	504, 1730
BstNSI	RCATGY	1 cut(s)	2201
BstPAI	GACNNNNGTC	1 cut(s)	221
BstSCI	CCNGG	2 cut(s)	502, 1728
BstSFI	CTRYAG	4 cut(s)	96, 615, 834, 1815
BstUI	CGCG	1 cut(s)	2010
BstV1I	GCAGC	5 cut(s)	635, 854, 1378, 1801, 1829
BstV2I	GAAGAC	1 cut(s)	393
BstX2I	RGATCY	2 cut(s)	328, 591
BstYI	RGATCY	2 cut(s)	328, 591
BsuRI	GGCC	3 cut(s)	306, 544, 1155
BtgI	CCRYGG	1 cut(s)	711
BtrI	CACGTC	1 cut(s)	1525
BtsCI	GGATG	2 cut(s)	921, 1672
BtsI	GCAGTG	1 cut(s)	474
BtsIMutI	CAGTG	3 cut(s)	474, 1290, 1617
Cac8I	GCNNGC	3 cut(s)	481, 1057, 1276
CaiI	CAGNNNCTG	2 cut(s)	170, 902
CfoI	GCGC	1 cut(s)	155
Cfr10I	RCCGGY	2 cut(s)	1528, 2070
Cfr13I	GGNCC	5 cut(s)	305, 542, 1154, 1894, 2029
CseI	GACGC	2 cut(s)	1061, 2003
Csp6I	GTAC	3 cut(s)	612, 1009, 1135
CspAI	ACCGGT	1 cut(s)	2070
CviAII	CATG	8 cut(s)	56, 772, 1012, 1453, 1493, 1862, 2144, 2198
CviQI	GTAC	3 cut(s)	612, 1009, 1135
DdeI	CTNAG	5 cut(s)	171, 297, 315, 798, 1344
DpnI	GATC	5 cut(s)	330, 593, 1542, 1625, 2046
DpnII	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
DraI	TTTAAA	1 cut(s)	1536
Eam1104I	CTCTTC	3 cut(s)	564, 730, 1110
EarI	CTCTTC	3 cut(s)	564, 730, 1110
Ecl136II	GAGCTC	2 cut(s)	1353, 1386
Eco24I	GRGCYC	2 cut(s)	1355, 1388
Eco31I	GGTCTC	1 cut(s)	1621
Eco47I	GGWCC	2 cut(s)	1894, 2029
Eco47III	AGCGCT	1 cut(s)	154
Eco53kI	GAGCTC	2 cut(s)	1353, 1386
Eco57I	CTGAAG	1 cut(s)	1134
Eco88I	CYCGRG	1 cut(s)	1447
EcoICRI	GAGCTC	2 cut(s)	1353, 1386
EcoNI	CCTNNNNNAGG	1 cut(s)	978
EcoO109I	RGGNCCY	2 cut(s)	542, 1154
EcoRI	GAATTC	1 cut(s)	126
EcoRII	CCWGG	2 cut(s)	502, 1728
EcoT22I	ATGCAT	1 cut(s)	2026
EcoT38I	GRGCYC	2 cut(s)	1355, 1388
FaeI	CATG	8 cut(s)	59, 775, 1015, 1456, 1496, 1865, 2147, 2201
FaqI	GGGAC	1 cut(s)	539
FatI	CATG	8 cut(s)	55, 771, 1011, 1452, 1492, 1861, 2143, 2197
FauI	CCCGC	2 cut(s)	709, 904
FauNDI	CATATG	1 cut(s)	1774
FblI	GTMKAC	2 cut(s)	1261, 1516
Fnu4HI	GCNGC	6 cut(s)	565, 624, 843, 1392, 1815, 1818
FokI	GGATG	2 cut(s)	928, 1679
FriOI	GRGCYC	2 cut(s)	1355, 1388
Fsp4HI	GCNGC	6 cut(s)	565, 624, 843, 1392, 1815, 1818
FspBI	CTAG	8 cut(s)	102, 123, 608, 1068, 1358, 1437, 1512, 1970
GlaI	GCGC	1 cut(s)	154
GluI	GCNGC	6 cut(s)	565, 624, 843, 1392, 1815, 1818
GsaI	CCCAGC	1 cut(s)	1647
GsuI	CTGGAG	3 cut(s)	93, 1275, 1902
HaeII	RGCGCY	1 cut(s)	156
HaeIII	GGCC	3 cut(s)	306, 544, 1155
HapII	CCGG	3 cut(s)	214, 1529, 2071
HgaI	GACGC	2 cut(s)	1061, 2003
HhaI	GCGC	1 cut(s)	155
Hin1II	CATG	8 cut(s)	59, 775, 1015, 1456, 1496, 1865, 2147, 2201
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HincII	GTYRAC	1 cut(s)	262
HindII	GTYRAC	1 cut(s)	262
HinfI	GANTC	7 cut(s)	167, 552, 738, 1338, 1433, 1671, 2000
HpaII	CCGG	3 cut(s)	214, 1529, 2071
HphI	GGTGA	6 cut(s)	62, 1481, 1598, 1735, 2060, 2122
Hpy166II	GTNNAC	6 cut(s)	262, 769, 1262, 1517, 1856, 1910
Hpy188I	TCNGA	9 cut(s)	172, 316, 385, 743, 891, 1092, 1320, 1760, 2005
Hpy188III	TCNNGA	9 cut(s)	72, 158, 491, 693, 1162, 1412, 1627, 1991, 2018
Hpy8I	GTNNAC	6 cut(s)	262, 769, 1262, 1517, 1856, 1910
HpyAV	CCTTC	5 cut(s)	754, 1145, 1465, 1778, 1942
HpyCH4III	ACNGT	6 cut(s)	46, 223, 1096, 1224, 1612, 1692
HpyCH4IV	ACGT	2 cut(s)	24, 1524
HpyF3I	CTNAG	5 cut(s)	171, 297, 315, 798, 1344
HpySE526I	ACGT	2 cut(s)	24, 1524
Hsp92II	CATG	8 cut(s)	59, 775, 1015, 1456, 1496, 1865, 2147, 2201
HspAI	GCGC	1 cut(s)	153
Kzo9I	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
LmnI	GCTCC	4 cut(s)	338, 1358, 1732, 2120
Lsp1109I	GCAGC	5 cut(s)	635, 854, 1378, 1801, 1829
LweI	GCATC	5 cut(s)	653, 829, 859, 1063, 2011
MaeI	CTAG	8 cut(s)	102, 123, 608, 1068, 1358, 1437, 1512, 1970
MaeII	ACGT	2 cut(s)	24, 1524
MaeIII	GTNAC	1 cut(s)	25
MalI	GATC	5 cut(s)	330, 593, 1542, 1625, 2046
MboI	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
MboII	GAAGA	6 cut(s)	28, 127, 398, 551, 747, 1127
MfeI	CAATTG	6 cut(s)	291, 816, 906, 1458, 1572, 2055
MflI	RGATCY	2 cut(s)	328, 591
MhlI	GDGCHC	5 cut(s)	248, 804, 1355, 1388, 1990
MluI	ACGCGT	1 cut(s)	2008
MlyI	GAGTC	3 cut(s)	561, 747, 1332
MmeI	TCCRAC	1 cut(s)	844
Mph1103I	ATGCAT	1 cut(s)	2026
MroXI	GAANNNNTTC	1 cut(s)	1019
MseI	TTAA	8 cut(s)	210, 728, 1184, 1241, 1535, 1550, 1746, 2215
MslI	CAYNNNNRTG	5 cut(s)	251, 272, 807, 1866, 2202
MspI	CCGG	3 cut(s)	214, 1529, 2071
MspR9I	CCNGG	2 cut(s)	504, 1730
MunI	CAATTG	6 cut(s)	291, 816, 906, 1458, 1572, 2055
MvaI	CCWGG	2 cut(s)	504, 1730
MvnI	CGCG	1 cut(s)	2010
NdeI	CATATG	1 cut(s)	1774
NdeII	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
NlaIII	CATG	8 cut(s)	59, 775, 1015, 1456, 1496, 1865, 2147, 2201
NlaIV	GGNNCC	4 cut(s)	330, 1734, 1895, 1953
NsiI	ATGCAT	1 cut(s)	2026
NspI	RCATGY	1 cut(s)	2201
OliI	CACNNNNGTG	1 cut(s)	807
PdmI	GAANNNNTTC	1 cut(s)	1019
PfeI	GAWTC	4 cut(s)	167, 1433, 1671, 2000
PinAI	ACCGGT	1 cut(s)	2070
PkrI	GCNGC	6 cut(s)	566, 625, 844, 1393, 1816, 1819
PleI	GAGTC	3 cut(s)	560, 746, 1332
PpsI	GAGTC	3 cut(s)	560, 746, 1332
PshAI	GACNNNNGTC	1 cut(s)	221
PsiI	TTATAA	1 cut(s)	356
Psp124BI	GAGCTC	2 cut(s)	1355, 1388
Psp1406I	AACGTT	1 cut(s)	24
Psp6I	CCWGG	2 cut(s)	502, 1728
PspFI	CCCAGC	1 cut(s)	1643
PspGI	CCWGG	2 cut(s)	502, 1728
PspN4I	GGNNCC	4 cut(s)	330, 1734, 1895, 1953
PspPI	GGNCC	5 cut(s)	305, 542, 1154, 1894, 2029
PstI	CTGCAG	1 cut(s)	1819
PstNI	CAGNNNCTG	2 cut(s)	170, 902
PsuI	RGATCY	2 cut(s)	328, 591
RsaI	GTAC	3 cut(s)	613, 1010, 1136
RsaNI	GTAC	3 cut(s)	612, 1009, 1135
RseI	CAYNNNNRTG	5 cut(s)	251, 272, 807, 1866, 2202
SacI	GAGCTC	2 cut(s)	1355, 1388
SaqAI	TTAA	8 cut(s)	210, 728, 1184, 1241, 1535, 1550, 1746, 2215
SatI	GCNGC	6 cut(s)	565, 624, 843, 1392, 1815, 1818
Sau3AI	GATC	5 cut(s)	328, 591, 1540, 1623, 2044
Sau96I	GGNCC	5 cut(s)	305, 542, 1154, 1894, 2029
SchI	GAGTC	3 cut(s)	561, 747, 1332
ScrFI	CCNGG	2 cut(s)	504, 1730
SduI	GDGCHC	5 cut(s)	248, 804, 1355, 1388, 1990
SfaNI	GCATC	5 cut(s)	653, 829, 859, 1063, 2011
SfcI	CTRYAG	4 cut(s)	96, 615, 834, 1815
SinI	GGWCC	2 cut(s)	1894, 2029
SmiMI	CAYNNNNRTG	5 cut(s)	251, 272, 807, 1866, 2202
SmlI	CTYRAG	2 cut(s)	241, 805
SmoI	CTYRAG	2 cut(s)	241, 805
SsiI	CCGC	6 cut(s)	238, 483, 565, 716, 911, 2129
SspMI	CTAG	8 cut(s)	102, 123, 608, 1068, 1358, 1437, 1512, 1970
SstI	GAGCTC	2 cut(s)	1355, 1388
StyD4I	CCNGG	2 cut(s)	502, 1728
TaaI	ACNGT	6 cut(s)	46, 223, 1096, 1224, 1612, 1692
TaiI	ACGT	2 cut(s)	27, 1527
TaqI	TCGA	4 cut(s)	406, 1349, 1674, 2047
TaqII	GACCGA	2 cut(s)	213, 2046
TatI	WGTACW	2 cut(s)	1008, 1134
TauI	GCSGC	1 cut(s)	567
TfiI	GAWTC	4 cut(s)	167, 1433, 1671, 2000
Tru1I	TTAA	8 cut(s)	210, 728, 1184, 1241, 1535, 1550, 1746, 2215
Tru9I	TTAA	8 cut(s)	210, 728, 1184, 1241, 1535, 1550, 1746, 2215
TscAI	CASTG	3 cut(s)	481, 1297, 1617
TseI	GCWGC	5 cut(s)	623, 842, 1391, 1814, 1817
TspGWI	ACGGA	1 cut(s)	1005
TspRI	CASTG	3 cut(s)	481, 1297, 1617
VpaK11BI	GGWCC	2 cut(s)	1894, 2029
XagI	CCTNNNNNAGG	1 cut(s)	978
XapI	RAATTY	4 cut(s)	126, 409, 945, 1484
XceI	RCATGY	1 cut(s)	2201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1904
XmiI	GTMKAC	2 cut(s)	1261, 1516
XmnI	GAANNNNTTC	1 cut(s)	1019
XspI	CTAG	8 cut(s)	102, 123, 608, 1068, 1358, 1437, 1512, 1970
Zsp2I	ATGCAT	1 cut(s)	2026

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.