RLG00000007211

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
14601335 .. 14608750
7416 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007211

Sequence Viewer

Length: 4161 bp
ATGCCGGAGGAAAATCCTTCGAATGGAGAGCTTGTGTACGAGAGTCGTGCGGTCGTTCCACGTGTTACCAGCGATGTAGCTGCCTTGACTAGACAAGGATCTGAGGGCGGCTGCATTGCAATTTTCAAGCAGCAGAATAGAGGGCCTGAAATGATATTTGCCCAAATTACCCACATCCTAATGAATGTGGGAGCAACTAAGCAGAAGAAAGGAAGAGGGGAAGAGGGCTACAATGGTATTTCAATCGTGATACTGGTTGATATGTTTGCTTATAAAGCAATGCTTGCGTGGAAGTACAACAAATTCATCATCCCATTTCCAGGAAAGTGCTGTGATCTTATCACTCAAGTGGGAAGCATGGCTGAGGAGAATCCGTCAGATGAAGATGTAATCACCAAGCAATACACTGCACCAAATAGCCGCTCAGCAGTGGTGGCAGTTTCCGAAGAATGTGAACAAAATATAAGCAAGAGCAAGCAGGATGGAACGAATACAGTACCATATTACAAGCTTTTCTCCTTTGCTGACTCCCTGGATTACCTGTTAATGTCTGTTGGTACAATCAGCGCCATTGGAAATGGACTCTGTATGCCTCTAATGACCATTGTCATGGGAGATGTGATTGATTCATTTGGAGAAACTAGGAACATCAAGGAAGTGTCTAATGCAGTTTCCAAGGTGGCTTTGAAGTTCGTTTACTTGGCTCTGGGGGCTGCTGCAGCATCATTTCTACAGATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCACGAATACGAAGTTTATACTTGAAAACCATACTAAGGCAAGATGTCGGCTTCTTTGATCAAGAAATCAACTCTGGGGAAATTGTTGGAAGGATGTCAGGTGATACTGTGCTCATTCAAGAGGCGATGGGTGAGAAGGTAGGAAGTTTTATCCAGTTAGTTGCAACGTTCATAGGTGGCTTTGGTATAGCATTTTTTAAGGGATCACTTCTCACCCTTGTCATGCTATCCTCTATTCCCCCTCTAGTCTTATCTACTGCTGTCCTGAACCATTTCATAGTCAAATTGGCATCCCATGGACAAGCTGCAAATTCAGGAGGAGCAAATGTGGTAGAGGAGACAATTAGTTCAATAAGAACTGTTGCATCATTCACAGGGGAGAAGAAAGCTATATCTAACTATAACTCCTCCTTAAGTAGAGCTTACAAGTCTGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTCTCGGTGTGGTTATGCTTATGGTATTCTCTACTTTCGCTTTGGCTATATGGTTTGGCGGAATAATGATACTTGAAAAAGGATATAAAGGAGGAGATGTCATCAATGTGATTATGGCTGTGTTGCTTGGCTCAGTGTCGCTTGGGAAAGCATCTCCTTGCATTAGTGCATTTGCTCCTGGACAAGCTGCAGCATATAAGATGTTTGAGACAATTAACAGAAAGCCGGAGATAGATGCATACAATACTAATGGGCGGATATTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTTATTTTAGCTACCCTGCAAGAATGGATGAGCAAATATTCCATGGATTTTGTCTCTCTATACCTAGTGGTGCAACTGCTGCTTTGGTTGGACGGAGCGGAAGTGGTAAATCGACTGTAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCTGGTGAAGTTCTTATTGACGGTATCAATCTCAAAGAGTTCCAGCTGAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAACATTGCCTATGGAAAGGATAATGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGTTTGCCAATGCAGCTAAATTCATAGATTTACTCCCTCAGGGAATAGACACAGTAGTCGGTGAGCATGGAACTCAGCTATCTGGGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGCAATTCTGAAGAATCCAAGAATTCTACTTTTAGATGAAGCCACAAGCGCTCTTGATGCAGAATCCGAACGAGTTGTGCAGGAGGCACTGGATAGAATTATGGTGAACCGGACTACTGTCATTGTAGCCCATCGCTTGAGTACAGTAAGGAATGCTGATACCATTGCTGTCATACATCGAGGAGTAATTGTTGAGCAAGGACCGCATTCAGAGCTAACTAAGGACCCTGATGGTGCATATCACCAGCTTATAAGGTTGCAAGAAAATATCACTGTGTCAAAACATACTGGTGTAGATGTCCAGGATTCTATCTTACCCTTTGTAAGAGAGGAATCATCTCCAAGAAGAAATAGTATTCCTTCTGCAAGCGGTATGCTTGAAACAGCACCTGTAGAGCCTGATATTCCAGCTACAGTTCTATCCAAAGGGCAGCCAAAATTTTCACTTCGCCGACTTGCTTACCTGAACAAGCCAGAGATCCCAATTATATTACTAGGGACAATAGCTGCATCGGTCAATGGGGCAGTCTTCCCTGTTTTTGGGAGTTTACTGGCAAGTGTTATCAAGACGTTCTTTGAGCCACCTCACAAACTCCGTAAGGATTCAAAGTTTTGGGCCTTAATGTTTTTAGTTCTTGGAATGGCATCTTTGTTGGCCAATCCATCAAGAGCATACCTTTTTGCGGTGGCAGGATGTAGGCTAATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTATATGGAAGTAAGTTGGTTTGATGAAGCTGAGCACTCAAGTGGTGCAATTGGTGCAAGGCTTTCTACGGATGCAGCGTCTTTGAGAGGGCTAGTTGGAGATGCTCTTGGTTTGGTTGTTCAGAATACAGCAACTGCAATTGCTGGGCTGATCATTGCTTTTGTTGCAGATTGGCAACTGGCTCTTATAATCCTTCTTCTGTTACCTTTATTAGGAGTAAATGGATACATTCAAGTCCAATTCACGAAAGGATTCAGTGCAGATGCAAAGAAAATGTATGAAGATGCGAGCCAAATAGCCAATGATGCTGTGGGGAGTATTCGTACAATTGCTTCCTTCTGTGCTGAGGAGAAGGTGATTGAGTTGTACCAGAGAAAATGTGAAGGCCCTATTAAGAATGGGATAAAACAAGGGATAGTTACAGGGATAGGTTTTGGATTATCATTCTTCTTACAGTTTTCAGTGTTTGCCTTAAGTTTTTATACTGGAGGTCTACTTGTTTCAGCAGGCAAGACAACATTCTCTGCTGTTTTCAGGGTTTTCTTTGCTCTCACTATGACTTCTATCGGACTTGCTCAGTCAACCTCCCTGGCACCTGATGTAAGTAAAGGAAAGGCTTCTGCTGCTTCAATATTTGCAATACTTGACCGGCAATCAGAAATAGACTCTAGTGATAACTCCGGGATGACTGTAGAACACTTGAAGGGAGAAATTGAATTTCACCATGTCAGTTTCAAGTATCCTAGTAGACCTAATGTGGAAATTTTCAACAATCTTTGCTTGACCATTAGTCATGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGGTCTCATTGATTCAAAGATTTTACGACCCGGATTCAGGACACATTACATTGGATGGAATCGAAATCCAGAAACTGCAATTGAAATGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAACGACACTATCCGAGCCAACATTGCATATGGAAAGGATGGAGGGGCAACCGAGGCAGAAATTATATCTGCAGCAGAACTGGCAAATGCTCACAAGTTTATTAGTAGTTTACAACATGGTTATGATACAATAGCAGGAGAGCGAGGAGTCCAGCTGTCTGGTGGACAGAAGCAAAGAGTAGCTATCGCGCGAGCTATAATCAAGGCACCAAAGATATTACTGCTAGATGAAGCGACCAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCGTTGGACCGAGTAATGGTGGACCGAACCACAGTTGTGGTTGCTCATCGGTTATCAACAATCAAGGGTGCAGATTTGATTGCAGTTGTGAAAAATGGAGCCATTGCAGAGAAAGGGAAGCATGAAACTTTGATCAATATCACGGATGGCATTTATGCTTCTTTGGTAGCATTACATGCAATTGCCTCATCTTAG

Protein Analysis

1387

Amino Acids

149.56

Weight (kDa)

6.66

Isoelectric Point (pI)

35.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 185 - 457 6.5e-56 ABC transporter transmembrane region
ABC_tran PF00005 527 - 673 6.2e-33 ABC transporter
ABC_membrane PF00664 820 - 1092 1.6e-56 ABC transporter transmembrane region
ABC_tran PF00005 1161 - 1310 4.1e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 273, 2222, 2900
AasI GACNNNNNNGTC 1 cut(s) 1910
AccB1I GGYRCC 2 cut(s) 3304, 3895
AccB7I CCANNNNNTGG 1 cut(s) 1685
AccBSI CCGCTC 2 cut(s) 423, 1629
AccI GTMKAC 2 cut(s) 3205, 3460
AccII CGCG 2 cut(s) 3878, 3880
AciI CCGC 9 cut(s) 50, 108, 421, 1293, 1489, 1629, 2174, 2340, 2654
AclI AACGTT 1 cut(s) 938
AclWI GGATC 4 cut(s) 106, 982, 1745, 2443
AcoI YGGCCR 1 cut(s) 2625
AcsI RAATTY 7 cut(s) 302, 1081, 1874, 1992, 2408, 3428, 3474
AcuI CTGAAG 2 cut(s) 1854, 2000
AcvI CACGTG 1 cut(s) 62
AfaI GTAC 7 cut(s) 38, 296, 498, 559, 2113, 3037, 3080
AfeI AGCGCT 1 cut(s) 2020
AfiI CCNNNNNNNGG 9 cut(s) 23, 320, 807, 1685, 2510, 2653, 2924, 3593, 3982
AflII CTTAAG 2 cut(s) 1183, 3184
AflIII ACRYGT 1 cut(s) 61
AhdI GACNNNNNGTC 1 cut(s) 3501
AjnI CCWGG 7 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3672
AleI CACNNNNGTG 3 cut(s) 347, 2751, 4001
Alw21I GWGCWC 3 cut(s) 885, 2748, 3934
Alw26I GTCTC 8 cut(s) 757, 1103, 1241, 1436, 1506, 1589, 3565, 3643
AlwI GGATC 4 cut(s) 106, 982, 1745, 2443
AlwNI CAGNNNCTG 3 cut(s) 2360, 2846, 3631
Aor51HI AGCGCT 1 cut(s) 2020
AoxI GGCC 5 cut(s) 143, 1753, 2586, 2625, 3097
ApoI RAATTY 7 cut(s) 302, 1081, 1874, 1992, 2408, 3428, 3474
Asp700I GAANNNNTTC 3 cut(s) 1043, 2963, 3328
AspLEI GCGC 3 cut(s) 569, 2021, 3880
AspS9I GGNCC 7 cut(s) 143, 2171, 2194, 2586, 3098, 3973, 3988
AsuC2I CCSGG 2 cut(s) 3394, 3587
AsuII TTCGAA 1 cut(s) 20
AvaII GGWCC 4 cut(s) 2171, 2194, 3973, 3988
AxyI CCTNAGG 1 cut(s) 1893
BalI TGGCCA 1 cut(s) 2627
BanI GGYRCC 2 cut(s) 3304, 3895
BarI GAAGNNNNNNTAC 4 cut(s) 680, 712, 3028, 3060
BbrPI CACGTG 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 2491
Bbv12I GWGCWC 3 cut(s) 885, 2748, 3934
BbvCI CCTCAGC 2 cut(s) 363, 3057
BccI CCATC 8 cut(s) 476, 892, 2109, 2195, 2641, 3605, 3722, 4106
BcgI CGANNNNNNTGC 6 cut(s) 29, 62, 63, 96, 2676, 2710
BciT130I CCWGG 7 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3674
BciVI GTATCC 2 cut(s) 2930, 3462
BclI TGATCA 4 cut(s) 750, 829, 2862, 4098
BcnI CCSGG 2 cut(s) 3394, 3587
BcoDI GTCTC 8 cut(s) 757, 1103, 1241, 1436, 1506, 1589, 3565, 3643
BfmI CTRYAG 8 cut(s) 717, 731, 1422, 1962, 2361, 2382, 3402, 3759
BfoI RGCGCY 2 cut(s) 570, 2022
BfrI CTTAAG 2 cut(s) 1183, 3184
BfuI GTATCC 2 cut(s) 2930, 3462
BlpI GCTNAGC 2 cut(s) 424, 2742
Bme1390I CCNGG 9 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3394, 3587, 3674
Bme18I GGWCC 4 cut(s) 2171, 2194, 3973, 3988
BmeRI GACNNNNNGTC 1 cut(s) 3501
BmgT120I GGNCC 7 cut(s) 143, 2171, 2194, 2586, 3098, 3973, 3988
BmiI GGNNCC 6 cut(s) 1770, 2196, 3306, 3678, 3897, 4066
BmrFI CCNGG 9 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3394, 3587, 3674
BoxI GACNNNNGTC 2 cut(s) 605, 2087
BpiI GAAGAC 1 cut(s) 2491
BpmI CTGGAG 2 cut(s) 777, 3219
Bpu10I CCTNAGC 2 cut(s) 363, 3057
Bpu1102I GCTNAGC 2 cut(s) 424, 2742
Bpu14I TTCGAA 1 cut(s) 20
BpuEI CTTGAG 3 cut(s) 330, 2128, 2734
BpuMI CCSGG 2 cut(s) 3394, 3587
BsaAI YACGTR 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 4103
BsaI GGTCTC 2 cut(s) 1241, 3565
BsaJI CCNNGG 6 cut(s) 531, 675, 1066, 1573, 3300, 3741
BsaWI WCCGGW 1 cut(s) 2079
Bsc4I CCNNNNNNNGG 9 cut(s) 23, 320, 807, 1685, 2510, 2653, 2924, 3593, 3982
Bse118I RCCGGY 1 cut(s) 3360
Bse21I CCTNAGG 1 cut(s) 1893
Bse3DI GCAATG 8 cut(s) 114, 285, 1803, 2133, 2697, 2865, 3711, 4068
Bse8I GATNNNNATC 1 cut(s) 4103
BseBI CCWGG 7 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3674
BseDI CCNNGG 6 cut(s) 531, 675, 1066, 1573, 3300, 3741
BseJI GATNNNNATC 1 cut(s) 4103
BseLI CCNNNNNNNGG 9 cut(s) 23, 320, 807, 1685, 2510, 2653, 2924, 3593, 3982
BseMI GCAATG 8 cut(s) 114, 285, 1803, 2133, 2697, 2865, 3711, 4068
BseRI GAGGAG 8 cut(s) 380, 1104, 1121, 1168, 1341, 2166, 3074, 3849
BseYI CCCAGC 1 cut(s) 2855
BsgI GTGCAG 5 cut(s) 393, 756, 2069, 2991, 4056
Bsh1236I CGCG 2 cut(s) 3878, 3880
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 5 cut(s) 145, 1755, 2588, 2627, 3099
BshNI GGYRCC 2 cut(s) 3304, 3895
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 3 cut(s) 885, 2748, 3934
BsiSI CCGG 6 cut(s) 5, 1460, 2080, 3361, 3393, 3587
BslFI GGGAC 2 cut(s) 1956, 2482
BslI CCNNNNNNNGG 9 cut(s) 23, 320, 807, 1685, 2510, 2653, 2924, 3593, 3982
BsmAI GTCTC 8 cut(s) 757, 1103, 1241, 1436, 1506, 1589, 3565, 3643
BsmFI GGGAC 2 cut(s) 1956, 2482
BsmI GAATGC 2 cut(s) 2128, 2176
BsnI GGCC 5 cut(s) 145, 1755, 2588, 2627, 3099
Bso31I GGTCTC 2 cut(s) 1241, 3565
Bsp119I TTCGAA 1 cut(s) 20
Bsp1286I GDGCHC 3 cut(s) 885, 2748, 3934
Bsp143I GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
Bsp1720I GCTNAGC 2 cut(s) 424, 2742
Bsp19I CCATGG 2 cut(s) 1066, 1573
BspACI CCGC 9 cut(s) 50, 108, 421, 1293, 1489, 1629, 2174, 2340, 2654
BspANI GGCC 5 cut(s) 145, 1755, 2588, 2627, 3099
BspFNI CGCG 2 cut(s) 3878, 3880
BspLI GGNNCC 6 cut(s) 1770, 2196, 3306, 3678, 3897, 4066
BspMAI CTGCAG 3 cut(s) 721, 1426, 3763
BspPI GGATC 4 cut(s) 106, 982, 1745, 2443
BspT104I TTCGAA 1 cut(s) 20
BspT107I GGYRCC 2 cut(s) 3304, 3895
BspTI CTTAAG 2 cut(s) 1183, 3184
BspTNI GGTCTC 2 cut(s) 1241, 3565
BsrBI CCGCTC 2 cut(s) 423, 1629
BsrDI GCAATG 8 cut(s) 114, 285, 1803, 2133, 2697, 2865, 3711, 4068
BsrFI RCCGGY 1 cut(s) 3360
BssAI RCCGGY 1 cut(s) 3360
BssECI CCNNGG 6 cut(s) 531, 675, 1066, 1573, 3300, 3741
BssMI GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
BssT1I CCWWGG 3 cut(s) 675, 1066, 1573
Bst2UI CCWGG 7 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3674
Bst6I CTCTTC 3 cut(s) 208, 216, 2674
BstAFI CTTAAG 2 cut(s) 1183, 3184
BstAPI GCANNNNNTGC 4 cut(s) 284, 1610, 2765, 4142
BstBAI YACGTR 1 cut(s) 62
BstBI TTCGAA 1 cut(s) 20
BstC8I GCNNGC 6 cut(s) 285, 476, 2338, 3001, 3220, 3882
BstDSI CCRYGG 2 cut(s) 1066, 1573
BstENI CCTNNNNNAGG 1 cut(s) 2922
BstFNI CGCG 2 cut(s) 3878, 3880
BstH2I RGCGCY 2 cut(s) 570, 2022
BstHHI GCGC 3 cut(s) 569, 2021, 3880
BstKTI GATC 9 cut(s) 101, 337, 753, 832, 977, 1740, 2451, 2865, 4101
BstMAI GTCTC 8 cut(s) 757, 1103, 1241, 1436, 1506, 1589, 3565, 3643
BstMBI GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
BstMCI CGRYCG 1 cut(s) 54
BstNI CCWGG 7 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3674
BstNSI RCATGY 1 cut(s) 4145
BstPAI GACNNNNGTC 2 cut(s) 605, 2087
BstSCI CCNGG 9 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3392, 3585, 3672
BstSFI CTRYAG 8 cut(s) 717, 731, 1422, 1962, 2361, 2382, 3402, 3759
BstUI CGCG 2 cut(s) 3878, 3880
BstV2I GAAGAC 1 cut(s) 2491
BstX2I RGATCY 2 cut(s) 98, 2448
BstXI CCANNNNNNTGG 3 cut(s) 610, 3848, 4003
BstYI RGATCY 2 cut(s) 98, 2448
Bsu36I CCTNAGG 1 cut(s) 1893
BsuI GTATCC 2 cut(s) 2930, 3462
BsuRI GGCC 5 cut(s) 145, 1755, 2588, 2627, 3099
BtgI CCRYGG 2 cut(s) 1066, 1573
BtgZI GCGATG 3 cut(s) 87, 911, 2087
BtsI GCAGTG 2 cut(s) 405, 435
Cac8I GCNNGC 6 cut(s) 285, 476, 2338, 3001, 3220, 3882
CaiI CAGNNNCTG 3 cut(s) 2360, 2846, 3631
CfoI GCGC 3 cut(s) 569, 2021, 3880
Cfr10I RCCGGY 1 cut(s) 3360
Cfr13I GGNCC 7 cut(s) 143, 2171, 2194, 2586, 3098, 3973, 3988
CseI GACGC 1 cut(s) 2778
Csp6I GTAC 7 cut(s) 37, 295, 497, 558, 2112, 3036, 3079
CviQI GTAC 7 cut(s) 37, 295, 497, 558, 2112, 3036, 3079
DpnI GATC 9 cut(s) 100, 336, 752, 831, 976, 1739, 2450, 2864, 4100
DpnII GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
DrdI GACNNNNNNGTC 1 cut(s) 1910
DriI GACNNNNNGTC 1 cut(s) 3501
DseDI GACNNNNNNGTC 1 cut(s) 1910
EaeI YGGCCR 1 cut(s) 2625
Eam1104I CTCTTC 3 cut(s) 208, 216, 2674
Eam1105I GACNNNNNGTC 1 cut(s) 3501
EarI CTCTTC 3 cut(s) 208, 216, 2674
EciI GGCGGA 2 cut(s) 1308, 1504
Eco130I CCWWGG 3 cut(s) 675, 1066, 1573
Eco147I AGGCCT 1 cut(s) 1755
Eco31I GGTCTC 2 cut(s) 1241, 3565
Eco47I GGWCC 4 cut(s) 2171, 2194, 3973, 3988
Eco47III AGCGCT 1 cut(s) 2020
Eco57I CTGAAG 2 cut(s) 1854, 2000
Eco72I CACGTG 1 cut(s) 62
Eco81I CCTNAGG 1 cut(s) 1893
EcoNI CCTNNNNNAGG 1 cut(s) 2922
EcoO109I RGGNCCY 3 cut(s) 143, 2194, 3098
EcoRI GAATTC 1 cut(s) 1992
EcoRII CCWGG 7 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3672
EcoT14I CCWWGG 3 cut(s) 675, 1066, 1573
EcoT22I ATGCAT 1 cut(s) 1474
ErhI CCWWGG 3 cut(s) 675, 1066, 1573
FalI AAGNNNNNCTT 6 cut(s) 267, 299, 1177, 1209, 2528, 2560
FaqI GGGAC 2 cut(s) 1956, 2482
FauNDI CATATG 1 cut(s) 3718
FbaI TGATCA 4 cut(s) 750, 829, 2862, 4098
FblI GTMKAC 2 cut(s) 3205, 3460
GlaI GCGC 3 cut(s) 568, 2020, 3879
GsaI CCCAGC 1 cut(s) 2859
GsuI CTGGAG 2 cut(s) 777, 3219
HaeII RGCGCY 2 cut(s) 570, 2022
HaeIII GGCC 5 cut(s) 145, 1755, 2588, 2627, 3099
HapII CCGG 6 cut(s) 5, 1460, 2080, 3361, 3393, 3587
HgaI GACGC 1 cut(s) 2778
HhaI GCGC 3 cut(s) 569, 2021, 3880
Hin6I GCGC 3 cut(s) 567, 2019, 3878
HinP1I GCGC 3 cut(s) 567, 2019, 3878
HincII GTYRAC 1 cut(s) 3294
HindII GTYRAC 1 cut(s) 3294
HindIII AAGCTT 1 cut(s) 509
HpaII CCGG 6 cut(s) 5, 1460, 2080, 3361, 3393, 3587
HpyCH4IV ACGT 3 cut(s) 61, 938, 2540
HpySE526I ACGT 3 cut(s) 61, 938, 2540
HspAI GCGC 3 cut(s) 567, 2019, 3878
Ksp22I TGATCA 4 cut(s) 750, 829, 2862, 4098
Kzo9I GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
LmnI GCTCC 6 cut(s) 191, 1091, 1414, 1626, 3676, 4064
MaeII ACGT 3 cut(s) 61, 938, 2540
MaeIII GTNAC 3 cut(s) 64, 2913, 3130
MalI GATC 9 cut(s) 100, 336, 752, 831, 976, 1739, 2450, 2864, 4100
MbiI CCGCTC 2 cut(s) 423, 1629
MboI GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
MfeI CAATTG 6 cut(s) 2760, 2850, 3039, 3516, 3635, 4146
MflI RGATCY 2 cut(s) 98, 2448
MhlI GDGCHC 3 cut(s) 885, 2748, 3934
MlsI TGGCCA 1 cut(s) 2627
MluNI TGGCCA 1 cut(s) 2627
MlyI GAGTC 6 cut(s) 52, 521, 576, 2691, 3371, 3846
MmeI TCCRAC 4 cut(s) 838, 1600, 2788, 3951
Mox20I TGGCCA 1 cut(s) 2627
Mph1103I ATGCAT 1 cut(s) 1474
MroXI GAANNNNTTC 3 cut(s) 1043, 2963, 3328
MscI TGGCCA 1 cut(s) 2627
MseI TTAA 9 cut(s) 545, 969, 1184, 1449, 1794, 2591, 3105, 3185, 3690
MslI CAYNNNNRTG 8 cut(s) 179, 347, 608, 1340, 2259, 2751, 3810, 4001
Msp20I TGGCCA 1 cut(s) 2627
MspA1I CMGCKG 2 cut(s) 1729, 3844
MspCI CTTAAG 2 cut(s) 1183, 3184
MspI CCGG 6 cut(s) 5, 1460, 2080, 3361, 3393, 3587
MspR9I CCNGG 9 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3394, 3587, 3674
MunI CAATTG 6 cut(s) 2760, 2850, 3039, 3516, 3635, 4146
Mva1269I GAATGC 2 cut(s) 2128, 2176
MvaI CCWGG 7 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3674
MvnI CGCG 2 cut(s) 3878, 3880
NciI CCSGG 2 cut(s) 3394, 3587
NcoI CCATGG 2 cut(s) 1066, 1573
NdeI CATATG 1 cut(s) 3718
NdeII GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
NlaIV GGNNCC 6 cut(s) 1770, 2196, 3306, 3678, 3897, 4066
NsiI ATGCAT 1 cut(s) 1474
NspI RCATGY 1 cut(s) 4145
NspV TTCGAA 1 cut(s) 20
OliI CACNNNNGTG 3 cut(s) 347, 2751, 4001
PceI AGGCCT 1 cut(s) 1755
PcsI WCGNNNNNNNCGW 1 cut(s) 2786
PctI GAATGC 2 cut(s) 2128, 2176
PdmI GAANNNNTTC 3 cut(s) 1043, 2963, 3328
PflMI CCANNNNNTGG 1 cut(s) 1685
PfoI TCCNGGA 4 cut(s) 319, 1411, 2271, 3392
PleI GAGTC 6 cut(s) 51, 521, 576, 2690, 3371, 3845
PmaCI CACGTG 1 cut(s) 62
PmlI CACGTG 1 cut(s) 62
PpsI GAGTC 6 cut(s) 51, 521, 576, 2690, 3371, 3845
Ppu21I YACGTR 1 cut(s) 62
PpuMI RGGWCCY 1 cut(s) 2194
PshAI GACNNNNGTC 2 cut(s) 605, 2087
PsiI TTATAA 3 cut(s) 273, 2222, 2900
Psp1406I AACGTT 1 cut(s) 938
Psp5II RGGWCCY 1 cut(s) 2194
Psp6I CCWGG 7 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3672
PspCI CACGTG 1 cut(s) 62
PspFI CCCAGC 1 cut(s) 2855
PspGI CCWGG 7 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3672
PspN4I GGNNCC 6 cut(s) 1770, 2196, 3306, 3678, 3897, 4066
PspPI GGNCC 7 cut(s) 143, 2171, 2194, 2586, 3098, 3973, 3988
PspPPI RGGWCCY 1 cut(s) 2194
PstI CTGCAG 3 cut(s) 721, 1426, 3763
PstNI CAGNNNCTG 3 cut(s) 2360, 2846, 3631
PsuI RGATCY 2 cut(s) 98, 2448
PvuII CAGCTG 2 cut(s) 1729, 3844
RsaI GTAC 7 cut(s) 38, 296, 498, 559, 2113, 3037, 3080
RsaNI GTAC 7 cut(s) 37, 295, 497, 558, 2112, 3036, 3079
RseI CAYNNNNRTG 8 cut(s) 179, 347, 608, 1340, 2259, 2751, 3810, 4001
SaqAI TTAA 9 cut(s) 545, 969, 1184, 1449, 1794, 2591, 3105, 3185, 3690
Sau3AI GATC 9 cut(s) 98, 334, 750, 829, 974, 1737, 2448, 2862, 4098
Sau96I GGNCC 7 cut(s) 143, 2171, 2194, 2586, 3098, 3973, 3988
SchI GAGTC 6 cut(s) 52, 521, 576, 2691, 3371, 3846
ScrFI CCNGG 9 cut(s) 321, 533, 1413, 1766, 2273, 3302, 3394, 3587, 3674
SduI GDGCHC 3 cut(s) 885, 2748, 3934
SfcI CTRYAG 8 cut(s) 717, 731, 1422, 1962, 2361, 2382, 3402, 3759
SfuI TTCGAA 1 cut(s) 20
SinI GGWCC 4 cut(s) 2171, 2194, 3973, 3988
SmiMI CAYNNNNRTG 8 cut(s) 179, 347, 608, 1340, 2259, 2751, 3810, 4001
SmlI CTYRAG 5 cut(s) 345, 1183, 2107, 2749, 3184
SmoI CTYRAG 5 cut(s) 345, 1183, 2107, 2749, 3184
SseBI AGGCCT 1 cut(s) 1755
SsiI CCGC 9 cut(s) 50, 108, 421, 1293, 1489, 1629, 2174, 2340, 2654
SspI AATATT 2 cut(s) 1569, 3345
StuI AGGCCT 1 cut(s) 1755
StyD4I CCNGG 9 cut(s) 319, 531, 1411, 1764, 2271, 3300, 3392, 3585, 3672
StyI CCWWGG 3 cut(s) 675, 1066, 1573
TaiI ACGT 3 cut(s) 64, 941, 2543
TaqI TCGA 4 cut(s) 20, 1643, 2149, 3618
TaqII GACCGA 3 cut(s) 2473, 3990, 4005
TatI WGTACW 2 cut(s) 294, 2111
TauI GCSGC 2 cut(s) 111, 423
Tru1I TTAA 9 cut(s) 545, 969, 1184, 1449, 1794, 2591, 3105, 3185, 3690
Tru9I TTAA 9 cut(s) 545, 969, 1184, 1449, 1794, 2591, 3105, 3185, 3690
TspGWI ACGGA 5 cut(s) 363, 1639, 2555, 2795, 4124
Van91I CCANNNNNTGG 1 cut(s) 1685
Vha464I CTTAAG 2 cut(s) 1183, 3184
VpaK11BI GGWCC 4 cut(s) 2171, 2194, 3973, 3988
XagI CCTNNNNNAGG 1 cut(s) 2922
XapI RAATTY 7 cut(s) 302, 1081, 1874, 1992, 2408, 3428, 3474
XceI RCATGY 1 cut(s) 4145
XcmI CCANNNNNNNNNTGG 2 cut(s) 3019, 3848
XmiI GTMKAC 2 cut(s) 3205, 3460
XmnI GAANNNNTTC 3 cut(s) 1043, 2963, 3328
Zsp2I ATGCAT 1 cut(s) 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.