Rroxscaffold_5G00369340

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
51145422 .. 51150841
5420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00369340.1

Sequence Viewer

Length: 3483 bp
ATGGGTGATCAGGAGAATCCTTTGGATGGAGATCATGTGATCAGAGAGGAAGCTGCGGCGTCGAAAAGTCATTCAGCACTGCCGGAATCCCAGAATGGACAGGAAAATAGTAGTAACAAGGAAGATGCAAGCAAGAGGAAGGACGGTGGCACCAAGACAGTACCCTTTTTCAAGCTCTTCTCATTTGCTGATTCCATGGATTACTTGTTAATGTCGGTTGGTACGATTGGCGCGATTGGAAATGGAATGTGTTTGCCTCTAATGACCGTAATCATGGGAGATGTGATTAATTCTTTTGGAGAATCTGGGAATTCCAATAAAGTGGTTGATACAGTGTCTAAGGTGGCTTTAAAGTTCGTCTACTTGGCTTTGGGAGCTGCAGCTGCTTCATTTCTACAGATGTCTTGTTGGATGATCACCGGAGAGAGACAGGCTGCGAGAATAAGATTTTTATACTTGAAAACAATATTGAGGCAAGACGTAGGCTTTTTTGATAAAGAAACTAGCACTGGAGAAGTTATTGGGAGGATGTCAGGTGATACTGTGCTCATTCAGGAGGCCATGGGAGAGAAGGTAGGAACTTGTATCCAGTTAGTTGCAACATTCTTTGGAGGCTTTATCATAGCCTTTGTTAAGGGATGGCTTCTTACCCTGGTCATGCTTTCTTCTATCCCCGCTCTTGTCATCTCTGGTGCTGTCATGAGCATCATCGTATCAAAGTTGGCATCTCGTGGACAAGCTGCTTATTCAGCAGGAGCATCTGTGGTTGAGCAGACAATTGGTTCAATAAGAACTGTTGCATCATTTACAGGGGAGAAACAAGCTATAACTAAGTACAACAGCTCTATAAATAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCTGGTTTGGGTATCGGTTCAGTTATGCTTATTATATTCTGTAGTTATGCTTTGGCTATATGCTCTCTTGGGCAGACATCTCCATGCTTGGCCGCATTTGCTTCTGGGAAAGCTGCAGCTTACAAGATGTTTGAGACAATTAGCAGAAACCCGGAGATAGATGCTTCTGATACTAAGGGGAAGCAATTACAAGATATTAGAGGAGACATAGAACTGAGGGATGTTCATTTTAGTTATCCTGCAAGACCAGATGAACATATATTCCGTGGATTTTCTCTCACAATTCCTAGTGGTGCAACTGCTGCTTTGGTAGGACAGAGCGGAAGTGGTAAATCGACTGTAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCCGGTGAAGTTCTCATTGACGGTGTCAATCTCAAAGAGTTCCAGCTGAAATGGATCAGGCAGAAAATAGGGCTTGTAAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCTGCTAAATTCATAGACAAACTTCCTCAGGGACTAGATACAATGGTGGGTGAGCATGGAACTCAACTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCTCGAGCAATTCTAAAAAACCCAAGAATTCTACTTCTAGATGAAGCCACAAGTGCTCTTGACGCAGAATCTGAGAGAGTTGTGCAGGAGGCACTGGATCGAATTATGGTTAACCGGACTACTGTCATAGTAGCCCATCGCTTGAGCACAGTAAGGAATGCTGATACCATTGCTGTCATACATAGAGGAACAATTGTTGAACAAGGACCACATTCCGAGCTAGTTAAGGATCCTGAGGGAGCATATAGCCAGCTTATAAGATTACAAGAAACCAGAACTGTGTCAGAACAGACTGGTGTAAATGATCAGGATAGGCCAGATATTTCTTCCGATTCTCGGAGACAGTCAAGTCAAAGATTTTCTTTATTAAGATCCATAAGCCGTGGATCATCTGGAAGAGCAAATAGTAGTCGTCACTCATTCTCAATCTCATATGGTGGTGCACCTACTGCAATCGGCATCCTTGAAACAAATCCTGCTGAACCTGATACTCATGCTCCAGCATCATCAAAAGGGCATGCAGAAGTCTCACTTAGCCGCCTAGCTGCTTTGAACAAGCCAGAGATCCCAGTGCTGCTTCTTGGTACTTTAGCTGCAGCAGCCAATGGGGCGATCTTACCTGTTTTTGGGATACTAATATCCAGTGTAATCAAGACCTTCTTTGAGCCACCTGATCAACTGAGTAAGGATTCAAAGTTTTGGGCATTAATCTTTGTTGTTCTTGGAGTTGCATCATTCTTGGCACATTCATCAAGAGCATATCTTTTTGGTGTGGCTGGATGTAAGTTGATAAGAAGAGTTCGATCAAAGTGCTTTGAGAAGGTGGTTTACATGGACATAGGTTGGTTTGATGAGTCTGATCATTCAAGTGGTGCAATTGGGGCAAGGCTTTCTACAGATGCGGCTTGTCTAAGAGGGTTGGTTGGAGATGCTCTGGGTTTGTTGGTTCAGAATATAGCAACTGCAGTTGCCGGCCTAGTTATTGCTTTCGTAGCAAATTGGCAATTGGCTCTTATAATCCTTGTCCTGCTGCCTTTGTTAGGACTAAGTGGATATTTTCAAGTCAAGTTAATGAAAGGGTTCAGTGCAGATGCAAAGAAAATGTACGAGGACGCAAGCCAAGTAGCCAATGATGCTGTTGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATGGAACTTTTCTATGCTGGAGCCCGACTTGTTGCAGCAGGCAAGACAGAATTTTCTGACGTGTTTCGGGTTTTCTTTGCTCTCACTATGACAGCGGTTGGACTATCTCAGTCGACCTTCCTATCCCCTGATGTAAGTAAAGGAAAGAGTTCTGCTTCTTCCATATTTGCAATTCTTGACGGCAAGTCAAAAATAGACTCTAGTGACGACTCTGGAACTACAATAGAAAATGTGAAGGGAGATATTGAACTACGCCATGTCAGTTTCAAGTATCCAACTAGACCCAACGTGCCAATCTTCCAGGATCTTTGCTTGACCATTCGTCATGGCAAGACTGTTGCTCTGGTTGGAGAAAGTGGCAGTGGGAAGTCGACAGTGATCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTCACATTACATTAGATGGAATCGAAATCCAAAAGCTGCAATTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAAGAGCCTCTGCTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGACGGGAATGCAACCGAAGCTGAAATTATAGCTGCCGCAGAATTGGCAAATGCCCACAAGTTCATTAGTAGCTTACAACAGACGAAATTGCCTCCTCATCGGTGCTTAAAGGATTTTAATGGCAAACGTCTCCCAGGATACAACGACCTTTTTCTTGCGGTAGTAGCACTCCAAACCTCAAGAACAGCGAACTTAGATTGTGTATGA

Protein Analysis

1160

Amino Acids

124.58

Weight (kDa)

7.54

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 73 - 316 1.8e-52 ABC transporter transmembrane region
ABC_tran PF00005 385 - 533 7.4e-34 ABC transporter
ABC_membrane PF00664 707 - 914 6.1e-48 ABC transporter transmembrane region
ABC_tran PF00005 1011 - 1119 1.1e-18 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1802, 2561
AasI GACNNNNNNGTC 1 cut(s) 1893
AccB1I GGYRCC 1 cut(s) 149
AccBSI CCGCTC 2 cut(s) 677, 1209
AccI GTMKAC 3 cut(s) 360, 2843, 3101
AccII CGCG 1 cut(s) 233
AciI CCGC 9 cut(s) 56, 675, 981, 1209, 2083, 2447, 2825, 3312, 3434
AclWI GGATC 8 cut(s) 1325, 1650, 1769, 1782, 1911, 1939, 2104, 3042
AcoI YGGCCR 1 cut(s) 978
AcsI RAATTY 4 cut(s) 310, 1454, 1572, 2780
AcuI CTGAAG 2 cut(s) 1434, 2739
AcyI GRCGYC 1 cut(s) 59
AfaI GTAC 5 cut(s) 162, 223, 836, 2131, 2651
AfiI CCNNNNNNNGG 6 cut(s) 26, 1265, 1881, 2171, 2585, 3143
AflIII ACRYGT 1 cut(s) 2790
AhdI GACNNNNNGTC 2 cut(s) 2914, 3051
AjiI CACGTC 1 cut(s) 2791
AjnI CCWGG 4 cut(s) 651, 1344, 3030, 3409
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
Alw21I GWGCWC 4 cut(s) 549, 1603, 1694, 1990
Alw26I GTCTC 7 cut(s) 421, 1016, 1086, 1879, 2077, 3193, 3410
Alw44I GTGCAC 1 cut(s) 1986
AlwI GGATC 8 cut(s) 1325, 1650, 1769, 1782, 1911, 1939, 2104, 3042
AlwNI CAGNNNCTG 1 cut(s) 1616
Ama87I CYCGRG 1 cut(s) 1548
AoxI GGCC 6 cut(s) 558, 978, 1263, 1522, 1859, 2518
ApaLI GTGCAC 1 cut(s) 1986
ApoI RAATTY 4 cut(s) 310, 1454, 1572, 2780
AseI ATTAAT 2 cut(s) 288, 2252
Asp700I GAANNNNTTC 2 cut(s) 2624, 2878
AspLEI GCGC 1 cut(s) 233
AspS9I GGNCC 2 cut(s) 1522, 1751
AsuC2I CCSGG 1 cut(s) 1040
AsuHPI GGTGA 7 cut(s) 17, 409, 548, 1280, 1508, 2740, 3229
AvaI CYCGRG 1 cut(s) 1548
AvaII GGWCC 1 cut(s) 1751
AxyI CCTNAGG 2 cut(s) 1473, 1779
BaeGI GKGCMC 1 cut(s) 1990
BaeI ACNNNNGTAYC 2 cut(s) 1476, 1509
BamHI GGATCC 1 cut(s) 1774
BanI GGYRCC 1 cut(s) 149
BanII GRGCYC 1 cut(s) 2755
BarI GAAGNNNNNNTAC 2 cut(s) 2357, 2389
BauI CACGAG 1 cut(s) 729
Bbv12I GWGCWC 4 cut(s) 549, 1603, 1694, 1990
BccI CCATC 6 cut(s) 20, 633, 1394, 1689, 2725, 3155
BceAI ACGGC 2 cut(s) 1911, 2926
BcgI CGANNNNNNTGC 2 cut(s) 2337, 2371
BciT130I CCWGG 4 cut(s) 653, 1346, 3032, 3411
BciVI GTATCC 4 cut(s) 596, 2169, 3012, 3407
BclI TGATCA 6 cut(s) 7, 39, 414, 1849, 2218, 2404
BcnI CCSGG 1 cut(s) 1040
BcoDI GTCTC 7 cut(s) 421, 1016, 1086, 1879, 2077, 3193, 3410
BfaI CTAG 9 cut(s) 504, 1176, 1481, 1583, 1766, 2087, 2522, 2931, 3009
BfmI CTRYAG 8 cut(s) 378, 395, 928, 1002, 1542, 2139, 2439, 2508
BfuI GTATCC 4 cut(s) 596, 2169, 3012, 3407
BglI GCCNNNNNGGC 1 cut(s) 2153
BlpI GCTNAGC 1 cut(s) 1434
Bme1390I CCNGG 5 cut(s) 653, 1040, 1346, 3032, 3411
Bme18I GGWCC 1 cut(s) 1751
BmeRI GACNNNNNGTC 2 cut(s) 2914, 3051
BmeT110I CYCGRG 1 cut(s) 1548
BmgBI CACGTC 1 cut(s) 2791
BmgT120I GGNCC 2 cut(s) 1522, 1751
BmiI GGNNCC 5 cut(s) 151, 1350, 1523, 1776, 2752
BmrFI CCNGG 5 cut(s) 653, 1040, 1346, 3032, 3411
BmrI ACTGGG 1 cut(s) 2108
BmuI ACTGGG 1 cut(s) 2108
BoxI GACNNNNGTC 1 cut(s) 1667
BpmI CTGGAG 3 cut(s) 531, 2028, 2769
Bpu1102I GCTNAGC 1 cut(s) 1434
BpuEI CTTGAG 2 cut(s) 1708, 3439
BpuMI CCSGG 1 cut(s) 1040
BsaBI GATNNNNATC 1 cut(s) 30
BsaHI GRCGYC 1 cut(s) 59
BsaJI CCNNGG 6 cut(s) 195, 561, 651, 1153, 1927, 3409
BsaWI WCCGGW 2 cut(s) 419, 1659
BsaXI ACNNNNNCTCC 8 cut(s) 21, 51, 558, 588, 747, 777, 2026, 2056
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 1265, 1881, 2171, 2585, 3143
Bse118I RCCGGY 2 cut(s) 1265, 2516
Bse1I ACTGG 6 cut(s) 514, 589, 1644, 1843, 2114, 2187
Bse21I CCTNAGG 2 cut(s) 1473, 1779
Bse3DI GCAATG 2 cut(s) 1713, 3261
Bse8I GATNNNNATC 1 cut(s) 30
BseBI CCWGG 4 cut(s) 653, 1346, 3032, 3411
BseDI CCNNGG 6 cut(s) 195, 561, 651, 1153, 1927, 3409
BseGI GGATG 8 cut(s) 31, 417, 534, 644, 1114, 1405, 2004, 2330
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 6 cut(s) 26, 1265, 1881, 2171, 2585, 3143
BseMI GCAATG 2 cut(s) 1713, 3261
BseMII CTCAG 7 cut(s) 1094, 1425, 1487, 1608, 1770, 2216, 2852
BseNI ACTGG 6 cut(s) 514, 589, 1644, 1843, 2114, 2187
BseRI GAGGAG 2 cut(s) 1104, 3360
BseSI GKGCMC 1 cut(s) 1990
BsgI GTGCAG 2 cut(s) 1649, 2652
Bsh1236I CGCG 1 cut(s) 233
BshFI GGCC 6 cut(s) 560, 980, 1265, 1524, 1861, 2520
BshNI GGYRCC 1 cut(s) 149
BsiHKAI GWGCWC 4 cut(s) 549, 1603, 1694, 1990
BsiHKCI CYCGRG 1 cut(s) 1548
BsiSI CCGG 6 cut(s) 83, 420, 1040, 1266, 1660, 2517
BslFI GGGAC 1 cut(s) 1491
BslI CCNNNNNNNGG 6 cut(s) 26, 1265, 1881, 2171, 2585, 3143
BsmAI GTCTC 7 cut(s) 421, 1016, 1086, 1879, 2077, 3193, 3410
BsmBI CGTCTC 1 cut(s) 3410
BsmFI GGGAC 1 cut(s) 1491
BsmI GAATGC 2 cut(s) 1708, 3289
BsnI GGCC 6 cut(s) 560, 980, 1265, 1524, 1861, 2520
BsoBI CYCGRG 1 cut(s) 1548
Bsp1286I GDGCHC 5 cut(s) 549, 1603, 1694, 1990, 2755
Bsp1720I GCTNAGC 1 cut(s) 1434
Bsp19I CCATGG 2 cut(s) 195, 561
BspACI CCGC 9 cut(s) 56, 675, 981, 1209, 2083, 2447, 2825, 3312, 3434
BspANI GGCC 6 cut(s) 560, 980, 1265, 1524, 1861, 2520
BspCNI CTCAG 7 cut(s) 1095, 1426, 1486, 1609, 1771, 2217, 2851
BspFNI CGCG 1 cut(s) 233
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 5 cut(s) 151, 1350, 1523, 1776, 2752
BspMAI CTGCAG 4 cut(s) 382, 1006, 2143, 2512
BspPI GGATC 8 cut(s) 1325, 1650, 1769, 1782, 1911, 1939, 2104, 3042
BspQI GCTCTTC 2 cut(s) 182, 1936
BspT107I GGYRCC 1 cut(s) 149
BsrBI CCGCTC 2 cut(s) 677, 1209
BsrDI GCAATG 2 cut(s) 1713, 3261
BsrFI RCCGGY 2 cut(s) 1265, 2516
BsrI ACTGG 6 cut(s) 514, 589, 1644, 1843, 2114, 2187
BssAI RCCGGY 2 cut(s) 1265, 2516
BssECI CCNNGG 6 cut(s) 195, 561, 651, 1153, 1927, 3409
BssNI GRCGYC 1 cut(s) 59
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 2 cut(s) 195, 561
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 4 cut(s) 653, 1346, 3032, 3411
Bst6I CTCTTC 4 cut(s) 182, 1936, 2335, 2715
BstACI GRCGYC 1 cut(s) 59
BstAPI GCANNNNNTGC 2 cut(s) 1190, 1994
BstC8I GCNNGC 7 cut(s) 130, 1440, 1796, 2064, 2518, 2662, 2770
BstDSI CCRYGG 4 cut(s) 195, 561, 1153, 1927
BstENI CCTNNNNNAGG 2 cut(s) 2583, 3141
BstF5I GGATG 8 cut(s) 31, 417, 534, 644, 1114, 1405, 2004, 2330
BstFNI CGCG 1 cut(s) 233
BstHHI GCGC 1 cut(s) 233
BstMAI GTCTC 7 cut(s) 421, 1016, 1086, 1879, 2077, 3193, 3410
BstNI CCWGG 4 cut(s) 653, 1346, 3032, 3411
BstNSI RCATGY 1 cut(s) 2066
BstPAI GACNNNNGTC 1 cut(s) 1667
BstSCI CCNGG 5 cut(s) 651, 1038, 1344, 3030, 3409
BstSFI CTRYAG 8 cut(s) 378, 395, 928, 1002, 1542, 2139, 2439, 2508
BstSLI GKGCMC 1 cut(s) 1990
BstUI CGCG 1 cut(s) 233
BstX2I RGATCY 4 cut(s) 1774, 1916, 2109, 3034
BstXI CCANNNNNNTGG 1 cut(s) 322
BstYI RGATCY 4 cut(s) 1774, 1916, 2109, 3034
Bsu36I CCTNAGG 2 cut(s) 1473, 1779
BsuI GTATCC 4 cut(s) 596, 2169, 3012, 3407
BsuRI GGCC 6 cut(s) 560, 980, 1265, 1524, 1861, 2520
BtgI CCRYGG 4 cut(s) 195, 561, 1153, 1927
BtgZI GCGATG 1 cut(s) 1667
BtrI CACGTC 1 cut(s) 2791
BtsCI GGATG 8 cut(s) 31, 417, 534, 644, 1114, 1405, 2004, 2330
BtsI GCAGTG 2 cut(s) 77, 3097
BtsIMutI CAGTG 9 cut(s) 77, 339, 507, 1637, 2121, 2194, 2635, 3097, 3111
Cac8I GCNNGC 7 cut(s) 130, 1440, 1796, 2064, 2518, 2662, 2770
CaiI CAGNNNCTG 1 cut(s) 1616
CciI TCATGA 1 cut(s) 699
CfoI GCGC 1 cut(s) 233
Cfr10I RCCGGY 2 cut(s) 1265, 2516
Cfr13I GGNCC 2 cut(s) 1522, 1751
CseI GACGC 3 cut(s) 48, 1616, 2666
Csp6I GTAC 5 cut(s) 161, 222, 835, 2130, 2650
CspCI CAANNNNNGTGG 2 cut(s) 3173, 3208
CviQI GTAC 5 cut(s) 161, 222, 835, 2130, 2650
DraI TTTAAA 1 cut(s) 351
DrdI GACNNNNNNGTC 1 cut(s) 1893
DriI GACNNNNNGTC 2 cut(s) 2914, 3051
DseDI GACNNNNNNGTC 1 cut(s) 1893
EaeI YGGCCR 1 cut(s) 978
Eam1104I CTCTTC 4 cut(s) 182, 1936, 2335, 2715
Eam1105I GACNNNNNGTC 2 cut(s) 2914, 3051
EarI CTCTTC 4 cut(s) 182, 1936, 2335, 2715
Eco130I CCWWGG 2 cut(s) 195, 561
Eco24I GRGCYC 1 cut(s) 2755
Eco47I GGWCC 1 cut(s) 1751
Eco57I CTGAAG 2 cut(s) 1434, 2739
Eco81I CCTNAGG 2 cut(s) 1473, 1779
Eco88I CYCGRG 1 cut(s) 1548
EcoNI CCTNNNNNAGG 2 cut(s) 2583, 3141
EcoRI GAATTC 2 cut(s) 310, 1572
EcoRII CCWGG 4 cut(s) 651, 1344, 3030, 3409
EcoT14I CCWWGG 2 cut(s) 195, 561
EcoT38I GRGCYC 1 cut(s) 2755
ErhI CCWWGG 2 cut(s) 195, 561
Esp3I CGTCTC 1 cut(s) 3410
FalI AAGNNNNNCTT 6 cut(s) 1891, 1923, 2061, 2093, 2189, 2221
FaqI GGGAC 1 cut(s) 1491
FauI CCCGC 1 cut(s) 682
FauNDI CATATG 2 cut(s) 1978, 3268
FbaI TGATCA 6 cut(s) 7, 39, 414, 1849, 2218, 2404
FblI GTMKAC 3 cut(s) 360, 2843, 3101
FokI GGATG 8 cut(s) 38, 424, 541, 651, 1121, 1412, 1991, 2337
FriOI GRGCYC 1 cut(s) 2755
FspBI CTAG 9 cut(s) 504, 1176, 1481, 1583, 1766, 2087, 2522, 2931, 3009
GlaI GCGC 1 cut(s) 232
GsuI CTGGAG 3 cut(s) 531, 2028, 2769
HaeIII GGCC 6 cut(s) 560, 980, 1265, 1524, 1861, 2520
HapII CCGG 6 cut(s) 83, 420, 1040, 1266, 1660, 2517
HgaI GACGC 3 cut(s) 48, 1616, 2666
HhaI GCGC 1 cut(s) 233
Hin1I GRCGYC 1 cut(s) 59
Hin6I GCGC 1 cut(s) 231
HinP1I GCGC 1 cut(s) 231
HincII GTYRAC 3 cut(s) 1657, 2844, 3102
HindII GTYRAC 3 cut(s) 1657, 2844, 3102
HindIII AAGCTT 1 cut(s) 855
HpaI GTTAAC 1 cut(s) 1657
HpaII CCGG 6 cut(s) 83, 420, 1040, 1266, 1660, 2517
HphI GGTGA 7 cut(s) 17, 409, 548, 1280, 1508, 2740, 3229
Hpy166II GTNNAC 8 cut(s) 361, 734, 1362, 1657, 1988, 2374, 2844, 3102
Hpy8I GTNNAC 8 cut(s) 361, 734, 1362, 1657, 1988, 2374, 2844, 3102
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 8 cut(s) 133, 565, 1390, 2212, 2359, 2719, 2857, 2959
HpyCH4IV ACGT 4 cut(s) 480, 2790, 3018, 3403
HpySE526I ACGT 4 cut(s) 480, 2790, 3018, 3403
Hsp92I GRCGYC 1 cut(s) 59
HspAI GCGC 1 cut(s) 231
KroI GCCGGC 1 cut(s) 2516
KroNI GCCGGC 1 cut(s) 2518
Ksp22I TGATCA 6 cut(s) 7, 39, 414, 1849, 2218, 2404
KspAI GTTAAC 1 cut(s) 1657
LguI GCTCTTC 2 cut(s) 182, 1936
LmnI GCTCC 5 cut(s) 374, 755, 1784, 2047, 2750
MaeI CTAG 9 cut(s) 504, 1176, 1481, 1583, 1766, 2087, 2522, 2931, 3009
MaeII ACGT 4 cut(s) 480, 2790, 3018, 3403
MaeIII GTNAC 4 cut(s) 113, 1958, 2933, 3146
MbiI CCGCTC 2 cut(s) 677, 1209
MfeI CAATTG 6 cut(s) 777, 1737, 2421, 2549, 2700, 3185
MflI RGATCY 4 cut(s) 1774, 1916, 2109, 3034
MhlI GDGCHC 5 cut(s) 549, 1603, 1694, 1990, 2755
MlyI GAGTC 3 cut(s) 2408, 2921, 2933
MmeI TCCRAC 5 cut(s) 389, 2449, 2809, 3029, 3058
MroNI GCCGGC 1 cut(s) 2516
MroXI GAANNNNTTC 2 cut(s) 2624, 2878
MslI CAYNNNNRTG 2 cut(s) 970, 2412
MspA1I CMGCKG 3 cut(s) 383, 1309, 2825
MspI CCGG 6 cut(s) 83, 420, 1040, 1266, 1660, 2517
MspR9I CCNGG 5 cut(s) 653, 1040, 1346, 3032, 3411
MunI CAATTG 6 cut(s) 777, 1737, 2421, 2549, 2700, 3185
Mva1269I GAATGC 2 cut(s) 1708, 3289
MvaI CCWGG 4 cut(s) 653, 1346, 3032, 3411
MvnI CGCG 1 cut(s) 233
NaeI GCCGGC 1 cut(s) 2518
NciI CCSGG 1 cut(s) 1040
NcoI CCATGG 2 cut(s) 195, 561
NdeI CATATG 2 cut(s) 1978, 3268
NgoMIV GCCGGC 1 cut(s) 2516
NlaIV GGNNCC 5 cut(s) 151, 1350, 1523, 1776, 2752
NmuCI GTSAC 3 cut(s) 1958, 2933, 3146
NspI RCATGY 1 cut(s) 2066
PaeI GCATGC 1 cut(s) 2066
PaeR7I CTCGAG 1 cut(s) 1548
PagI TCATGA 1 cut(s) 699
PciSI GCTCTTC 2 cut(s) 182, 1936
PcsI WCGNNNNNNNCGW 2 cut(s) 221, 230
PctI GAATGC 2 cut(s) 1708, 3289
PdiI GCCGGC 1 cut(s) 2518
PdmI GAANNNNTTC 2 cut(s) 2624, 2878
PfeI GAWTC 9 cut(s) 16, 86, 191, 302, 1613, 1877, 2234, 3140, 3165
PflFI GACNNNGTC 1 cut(s) 1286
PfoI TCCNGGA 1 cut(s) 3030
PleI GAGTC 3 cut(s) 2407, 2921, 2933
PpsI GAGTC 3 cut(s) 2407, 2921, 2933
PshAI GACNNNNGTC 1 cut(s) 1667
PshBI ATTAAT 2 cut(s) 288, 2252
PsiI TTATAA 2 cut(s) 1802, 2561
Psp6I CCWGG 4 cut(s) 651, 1344, 3030, 3409
PspGI CCWGG 4 cut(s) 651, 1344, 3030, 3409
PspN4I GGNNCC 5 cut(s) 151, 1350, 1523, 1776, 2752
PspPI GGNCC 2 cut(s) 1522, 1751
PspXI VCTCGAGB 1 cut(s) 1548
PstI CTGCAG 4 cut(s) 382, 1006, 2143, 2512
PstNI CAGNNNCTG 1 cut(s) 1616
PsuI RGATCY 4 cut(s) 1774, 1916, 2109, 3034
PsyI GACNNNGTC 1 cut(s) 1286
PvuII CAGCTG 2 cut(s) 383, 1309
RsaI GTAC 5 cut(s) 162, 223, 836, 2131, 2651
RsaNI GTAC 5 cut(s) 161, 222, 835, 2130, 2650
RseI CAYNNNNRTG 2 cut(s) 970, 2412
SalI GTCGAC 2 cut(s) 2842, 3100
SapI GCTCTTC 2 cut(s) 182, 1936
Sau96I GGNCC 2 cut(s) 1522, 1751
SchI GAGTC 3 cut(s) 2408, 2921, 2933
ScrFI CCNGG 5 cut(s) 653, 1040, 1346, 3032, 3411
SduI GDGCHC 5 cut(s) 549, 1603, 1694, 1990, 2755
SfcI CTRYAG 8 cut(s) 378, 395, 928, 1002, 1542, 2139, 2439, 2508
Sfr274I CTCGAG 1 cut(s) 1548
SinI GGWCC 1 cut(s) 1751
SlaI CTCGAG 1 cut(s) 1548
SmiMI CAYNNNNRTG 2 cut(s) 970, 2412
SmlI CTYRAG 3 cut(s) 1548, 1687, 3454
SmoI CTYRAG 3 cut(s) 1548, 1687, 3454
SphI GCATGC 1 cut(s) 2066
SsiI CCGC 9 cut(s) 56, 675, 981, 1209, 2083, 2447, 2825, 3312, 3434
SspI AATATT 2 cut(s) 468, 1384
SspMI CTAG 9 cut(s) 504, 1176, 1481, 1583, 1766, 2087, 2522, 2931, 3009
StyD4I CCNGG 5 cut(s) 651, 1038, 1344, 3030, 3409
StyI CCWWGG 2 cut(s) 195, 561
TaiI ACGT 4 cut(s) 483, 2793, 3021, 3406
TaqI TCGA 8 cut(s) 62, 1223, 1549, 1645, 2347, 2843, 3101, 3168
TatI WGTACW 1 cut(s) 834
TauI GCSGC 5 cut(s) 59, 983, 2085, 2450, 3314
TfiI GAWTC 9 cut(s) 16, 86, 191, 302, 1613, 1877, 2234, 3140, 3165
TscAI CASTG 9 cut(s) 84, 339, 514, 1644, 2121, 2194, 2635, 3097, 3111
TseFI GTSAC 3 cut(s) 1958, 2933, 3146
Tsp45I GTSAC 3 cut(s) 1958, 2933, 3146
TspDTI ATGAA 8 cut(s) 378, 1103, 1155, 1447, 1602, 2283, 2633, 3328
TspGWI ACGGA 1 cut(s) 1142
TspRI CASTG 9 cut(s) 84, 339, 514, 1644, 2121, 2194, 2635, 3097, 3111
Tth111I GACNNNGTC 1 cut(s) 1286
VneI GTGCAC 1 cut(s) 1986
VpaK11BI GGWCC 1 cut(s) 1751
VspI ATTAAT 2 cut(s) 288, 2252
XagI CCTNNNNNAGG 2 cut(s) 2583, 3141
XapI RAATTY 4 cut(s) 310, 1454, 1572, 2780
XbaI TCTAGA 1 cut(s) 1582
XceI RCATGY 1 cut(s) 2066
XhoI CTCGAG 1 cut(s) 1548
XmiI GTMKAC 3 cut(s) 360, 2843, 3101
XmnI GAANNNNTTC 2 cut(s) 2624, 2878
XspI CTAG 9 cut(s) 504, 1176, 1481, 1583, 1766, 2087, 2522, 2931, 3009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.