Rh4CG298400

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
55854438 .. 55883210
28773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG298400.1

Sequence Viewer

Length: 3543 bp
ATGGCAGAGGAGAATCCTTCAGATGGAGATGCAATAACAGAGCAAGAAACTCCAACAAATAGCCATCCAACAGTGATGGTGGGTTCCAACGAAAACAGACTAGATACAAGCAAGAGCAAGGAGGATGGAACTAAAACAGTTCCACTCTACAAACTTTTCTCTTTTGCTGATTCCATGGATTACCTGCTAATGTCTGTTGGTACAATCAGCGCTATTGGTAATGGACTCTGTATGCCTCTAATGGCCATAGTCTTTGGAGATCTACTTACTTCTTTTTTAGAAACTGGGAATAACAAGAGAGTGGCTGATGCAGTTTCCAAGGTGGCTCTAAAGTATGTTTACTTGGCTCTTGGGGGTGCTGCTGCAGCATTTCTACGTAAGTCCATTGGGTCAGTTTTTTTAATAAATTGTTTGGCCTGGTGCAAAAGTGAAATACTTGATTTCTGTGTGCTAGAGATGTCATGCTGGATGGTCACTGGAGAGAGACAGGCTGCACGATTACGAAGTTTATACTTGAAGACCATACTGAGGCAAGATGTCAGCTATTTTGATCAAGAAATCAACTCTGGAGAAATTGTTGGGAGGATGTCAGGTGATACTCTGCTCATTAAAGAGGCGATGGGTGAGAAGGTAGGAACTTTTATCCAAGTAGTCGCAACATTCACAGGCAGCTATATTATAGCATTTTTTAAGGGATGGCTTCTCACCCTTGTCATGATATCCTCTATTCCCCCTCTTGTCTTCTCGGGTGCTGTCATGAACCATTTCATAGTGAAATTGGCATCCAATGGACAAGCTGCATATTCAGGAGGAGCAACTGTGGTAGAGGAGACAATTGGTTCTATCAGAACTGTTGCATCGTTCACAGGGGAGAAGCAAGCTATATCTAACTACAATAATTCCTTGAATAAAGCTTACAAGTCCGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTTCTGGTGCACTTAGGCTTATGGTATTCTGTACATATGCTTTGGCTGTATGGTTTGGTGGAATAATGATACTTGAAAAAGGATACAAGGGAGGAGATGTCATGACAGTAATTTTTGCTGTGTTGATGGGCTCTCTGTCTCTTGGGAAAGCATTTCCTTGCATCAGTGCATTTGCACCTGGCCAAGCTGCAGCTTATAAGATGTTTGAGACAATTAACAGAAAACCCGAGATAGATGCATATGATACTACTGGGAAGGTATTACAAGATATTAGTGGAGACATAGAACTAAGGGATGTTTGTTTTAGTTATCCCACAAGACTGGATGAGCAAATATTCAATGGATTTTGTCTCTCAATACCTAGTGGTGCAACTGCAGCTTTGGTTGGAGAAAGCGGAAGTGGTAAATCAACTGTACTCAGTTTGATTGAAAGATTTTATGACCCCCAGGATGGTGAAGTTCTTATTGACTGTGTTAATATCAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATTGGCCTTGTAAGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAATATTGCGTTTGGAAAGGATGGTGCTACTACTGAAGAGGTAGCGACTGCTTCTGAGCTTGCCAATGCTGCAAAATTCATAGCTTTACTGCCTCAGGGAATAGATACCTTGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGGCAAAAGCAAAGAGTTGCTATAGCCAGAGCAATTCTGAAGAACCCGAGAATTCTACTTTTAGATGAAGCGACAAGCGCACTTGACACAAAATCAGAAAGAATTGTGCAGGAGGCGCTGGACAGGGGAATAATTGCTCAGAAAGGACCACATTCTGAGCTAATCAGGAATCCCGATGGAGCATATAGCAGGCTTATAAGGTTGCAAGAAACTAGTTCTCTGTCAGAAGACTCGGAACATACTTGTCTAAATTCTGAGAAATCATCTCCAAGAAGAAGCAGTAGTCATCACTCATTCTCAATCTCATATGGTATTCCTAATGCAAGCGGTATCCTTAAAACAACAGCTGTAGAACCTGACGTTCCTGCTTCTGTACCAACAAAAGGGCCTCCAGGAGTCTCTCTTCGCCGCGTTGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCTGTCAATGGGGTAATCTTCCCTGTCTATGGTAGTTTGTTGTCAAGTGTAATCAAGACCTTCTTTGAGCCACCCCATGAACTTCGTAAGCATTCAAAGTTTTTGGCATCAATCTTTGTTATTCTTGGAGTGGTATCTTTCTTGGCACAATCGTCAAGAGCACACCTCTTTGCCGTGGCGAGCTGCAGGTTAATAAGAAGAGTCCGCGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGAGCACTCAAGTGGTGCCATTGGGGCAAGGCTTTCTATAGATGCAGCGTCTTTGAGAGGGCTTGTTGGAGATGCTCTTGGTTTGGTGGTTGAGAATACGGCGGCAGCAATTATGGGGGTGATTATTGCTTTTGGTGCAAATTGGCAACTTTCTCTTGTAATTCTTGTTCTGTTACCTTTATTGGGAATAAACGGATATCTTCAAGACCAGTACATGAAAGGATTCAGTGCAGATGCAAAGAAATTGTACGAGGACGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAGTTGCTTCCTTTTGTGCTGAAGAGAAGATGATTGAGTTGTACAAGAAAAAATGTGAAAGCCCTATTAAGGCAGGGATAAGACAAGGTTTAGTTTCTGGGATAGGTTTTGGGGTATCACTCTTTTTACTGTTTTCAGCGTTTGCCTTAATATTTTACACTGGTGGTCTACTTGTTGCAGCAGGAAAGACAACAGCCTCTGCTGTTTTCCGGGCTGTCTTTGCTCTCACTATTGCTTCTTTTGGACTTGCTCAGTCAAGCTCCCTAGCAACTGATGTTAGTAAAGGAAAGAGCTCTGCTGCTTCCATATTCGAAATTCTTGACATGAAATCAAAAATAGACTCTAGTGATAACTCGGGCATGACAATAGAAAATGTGAAGGGAGAACTTGAATTTCACCACGTCAATTTCAAGTATCCTAGTAGACCTAACGTGCCAATTTTCAACGATCTTTGCTTGACCATTAGTCATGGCGAGACAATTGCTCTGGTTGGTGAAAGTGGGAGTGGAAAATCGACAGTAATCTCTTTGATCCAGAGATTTTACGATCCTGATTCAGGTCACATTACATTGGATGGAATCGTAATTCAGAAACTAGAGTTGACGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAATGACACGATCCGAGCTAACATTGCATATGGAAAGGAAGGAGAGACAACCGAGGCTGAAATTATAGCTGCAGCAGAACTGGCAAATGCACACGAGTTCATTAGTAGTTTACAACATCGAATGACAGTACTCCAACTCTTATATATCTTTGAAGTATCACTAACAATCCTTCAAATTCCTCCCCTCAAGTTCTCATTCGATTAG

Protein Analysis

1180

Amino Acids

127.25

Weight (kDa)

5.86

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 149 - 364 2.1e-50 ABC transporter transmembrane region
ABC_tran PF00005 433 - 580 6.8e-32 ABC transporter
ABC_membrane PF00664 703 - 974 6.1e-50 ABC transporter transmembrane region
ABC_tran PF00005 1044 - 1144 3.8e-18 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1152, 1859
Acc36I ACCTGC 2 cut(s) 192, 2307
AccB1I GGYRCC 1 cut(s) 2405
AccI GTMKAC 2 cut(s) 2854, 3109
AccII CGCG 2 cut(s) 2073, 2337
AciI CCGC 5 cut(s) 1350, 1989, 2071, 2335, 2492
AclWI GGATC 4 cut(s) 1466, 3211, 3227, 3343
AcoI YGGCCR 2 cut(s) 243, 1135
AcsI RAATTY 6 cut(s) 1595, 1713, 1912, 3000, 3077, 3513
AcuI CTGAAG 3 cut(s) 1575, 1721, 2727
AfaI GTAC 9 cut(s) 202, 988, 1371, 2037, 2119, 2603, 2639, 2729, 3468
AfeI AGCGCT 1 cut(s) 211
AfiI CCNNNNNNNGG 8 cut(s) 23, 528, 1406, 2045, 2159, 2573, 2755, 3242
AhdI GACNNNNNGTC 1 cut(s) 3150
AhlI ACTAGT 1 cut(s) 1874
AjiI CACGTC 2 cut(s) 3088, 3291
AjnI CCWGG 6 cut(s) 416, 1132, 1401, 1485, 2053, 3321
AleI CACNNNNGTG 1 cut(s) 2400
Alw21I GWGCWC 4 cut(s) 967, 2293, 2397, 2981
Alw44I GTGCAC 1 cut(s) 963
AlwI GGATC 4 cut(s) 1466, 3211, 3227, 3343
AlwNI CAGNNNCTG 1 cut(s) 2885
Ama87I CYCGRG 4 cut(s) 745, 1181, 1708, 3040
Aor51HI AGCGCT 1 cut(s) 211
AoxI GGCC 5 cut(s) 243, 414, 1135, 1474, 2048
ApaLI GTGCAC 1 cut(s) 963
ApoI RAATTY 6 cut(s) 1595, 1713, 1912, 3000, 3077, 3513
Asp700I GAANNNNTTC 2 cut(s) 764, 2612
AspLEI GCGC 4 cut(s) 212, 1742, 1780, 2339
AspS9I GGNCC 2 cut(s) 1808, 2048
AsuC2I CCSGG 1 cut(s) 2897
AsuHPI GGTGA 9 cut(s) 605, 635, 697, 1421, 1649, 2521, 3074, 3191, 3328
AsuII TTCGAA 1 cut(s) 2997
AvaI CYCGRG 4 cut(s) 745, 1181, 1708, 3040
AvaII GGWCC 1 cut(s) 1808
AxyI CCTNAGG 1 cut(s) 1614
BaeGI GKGCMC 1 cut(s) 967
BaeI ACNNNNGTAYC 4 cut(s) 1617, 1650, 2109, 2142
BalI TGGCCA 2 cut(s) 245, 1137
BanI GGYRCC 1 cut(s) 2405
BanII GRGCYC 2 cut(s) 1088, 2981
BarI GAAGNNNNNNTAC 2 cut(s) 2345, 2377
BauI CACGAG 1 cut(s) 3431
BbsI GAAGAC 3 cut(s) 524, 733, 1896
Bbv12I GWGCWC 4 cut(s) 967, 2293, 2397, 2981
BceAI ACGGC 2 cut(s) 2288, 2505
BcgI CGANNNNNNTGC 4 cut(s) 1172, 1206, 3149, 3183
BciT130I CCWGG 6 cut(s) 418, 1134, 1403, 1487, 2055, 3323
BciVI GTATCC 3 cut(s) 1031, 2003, 3111
BclI TGATCA 1 cut(s) 550
BcnI CCSGG 1 cut(s) 2897
BcuI ACTAGT 1 cut(s) 1874
BfmI CTRYAG 9 cut(s) 363, 1143, 1329, 1683, 2010, 2121, 2314, 2427, 3408
BfoI RGCGCY 2 cut(s) 213, 1781
BfuAI ACCTGC 2 cut(s) 192, 2307
BfuI GTATCC 3 cut(s) 1031, 2003, 3111
BglI GCCNNNNNGGC 1 cut(s) 2414
BglII AGATCT 1 cut(s) 259
BlpI GCTNAGC 1 cut(s) 2391
BmcAI AGTACT 1 cut(s) 3468
Bme1390I CCNGG 7 cut(s) 418, 1134, 1403, 1487, 2055, 2897, 3323
Bme18I GGWCC 1 cut(s) 1808
BmeRI GACNNNNNGTC 1 cut(s) 3150
BmeT110I CYCGRG 4 cut(s) 745, 1181, 1708, 3040
BmgBI CACGTC 2 cut(s) 3088, 3291
BmgT120I GGNCC 2 cut(s) 1808, 2048
BmiI GGNNCC 4 cut(s) 85, 1491, 2407, 3327
BmrFI CCNGG 7 cut(s) 418, 1134, 1403, 1487, 2055, 2897, 3323
BmrI ACTGGG 2 cut(s) 294, 1215
BmuI ACTGGG 2 cut(s) 294, 1215
BpiI GAAGAC 3 cut(s) 524, 733, 1896
BplI GAGNNNNNCTC 2 cut(s) 2280, 2312
BpmI CTGGAG 3 cut(s) 498, 588, 2037
Bpu1102I GCTNAGC 1 cut(s) 2391
Bpu14I TTCGAA 1 cut(s) 2997
BpuEI CTTGAG 2 cut(s) 2383, 3509
BpuMI CCSGG 1 cut(s) 2897
BsaAI YACGTR 1 cut(s) 377
BsaJI CCNNGG 6 cut(s) 174, 318, 1401, 1629, 2304, 3390
BsaWI WCCGGW 1 cut(s) 923
BsaXI ACNNNNNCTCC 6 cut(s) 561, 591, 804, 834, 1038, 1068
Bsc4I CCNNNNNNNGG 8 cut(s) 23, 528, 1406, 2045, 2159, 2573, 2755, 3242
Bse21I CCTNAGG 1 cut(s) 1614
Bse3DI GCAATG 2 cut(s) 2346, 3360
BseBI CCWGG 6 cut(s) 418, 1134, 1403, 1487, 2055, 3323
BseDI CCNNGG 6 cut(s) 174, 318, 1401, 1629, 2304, 3390
BseLI CCNNNNNNNGG 8 cut(s) 23, 528, 1406, 2045, 2159, 2573, 2755, 3242
BseMI GCAATG 2 cut(s) 2346, 3360
BseRI GAGGAG 4 cut(s) 23, 825, 842, 1062
BseSI GKGCMC 1 cut(s) 967
BsgI GTGCAG 3 cut(s) 477, 1790, 2640
Bsh1236I CGCG 2 cut(s) 2073, 2337
BshFI GGCC 5 cut(s) 245, 416, 1137, 1476, 2050
BshNI GGYRCC 1 cut(s) 2405
BsiHKAI GWGCWC 4 cut(s) 967, 2293, 2397, 2981
BsiHKCI CYCGRG 4 cut(s) 745, 1181, 1708, 3040
BsiSI CCGG 2 cut(s) 924, 2896
BslI CCNNNNNNNGG 8 cut(s) 23, 528, 1406, 2045, 2159, 2573, 2755, 3242
BsmI GAATGC 1 cut(s) 2221
BsnI GGCC 5 cut(s) 245, 416, 1137, 1476, 2050
BsoBI CYCGRG 4 cut(s) 745, 1181, 1708, 3040
Bsp119I TTCGAA 1 cut(s) 2997
Bsp1286I GDGCHC 5 cut(s) 967, 1088, 2293, 2397, 2981
Bsp1407I TGTACA 2 cut(s) 986, 2727
Bsp143I GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
Bsp1720I GCTNAGC 1 cut(s) 2391
Bsp19I CCATGG 1 cut(s) 174
BspACI CCGC 5 cut(s) 1350, 1989, 2071, 2335, 2492
BspANI GGCC 5 cut(s) 245, 416, 1137, 1476, 2050
BspFNI CGCG 2 cut(s) 2073, 2337
BspHI TCATGA 3 cut(s) 714, 756, 1056
BspLI GGNNCC 4 cut(s) 85, 1491, 2407, 3327
BspMAI CTGCAG 5 cut(s) 367, 1147, 1333, 2318, 3412
BspMI ACCTGC 2 cut(s) 192, 2307
BspPI GGATC 4 cut(s) 1466, 3211, 3227, 3343
BspT104I TTCGAA 1 cut(s) 2997
BspT107I GGYRCC 1 cut(s) 2405
BsrDI GCAATG 2 cut(s) 2346, 3360
BsrGI TGTACA 2 cut(s) 986, 2727
BssECI CCNNGG 6 cut(s) 174, 318, 1401, 1629, 2304, 3390
BssMI GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
BssSI CACGAG 1 cut(s) 3431
BssT1I CCWWGG 3 cut(s) 174, 318, 1629
Bst2BI CACGAG 1 cut(s) 3431
Bst2UI CCWGG 6 cut(s) 418, 1134, 1403, 1487, 2055, 3323
Bst6I CTCTTC 4 cut(s) 1551, 2070, 2323, 2703
BstAUI TGTACA 2 cut(s) 986, 2727
BstBAI YACGTR 1 cut(s) 377
BstBI TTCGAA 1 cut(s) 2997
BstC8I GCNNGC 6 cut(s) 879, 1581, 1853, 1987, 2311, 2650
BstDSI CCRYGG 2 cut(s) 174, 2304
BstENI CCTNNNNNAGG 1 cut(s) 3240
BstFNI CGCG 2 cut(s) 2073, 2337
BstH2I RGCGCY 2 cut(s) 213, 1781
BstHHI GCGC 4 cut(s) 212, 1742, 1780, 2339
BstKTI GATC 7 cut(s) 262, 553, 1461, 3136, 3219, 3235, 3351
BstMBI GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
BstNI CCWGG 6 cut(s) 418, 1134, 1403, 1487, 2055, 3323
BstSCI CCNGG 7 cut(s) 416, 1132, 1401, 1485, 2053, 2895, 3321
BstSFI CTRYAG 9 cut(s) 363, 1143, 1329, 1683, 2010, 2121, 2314, 2427, 3408
BstSLI GKGCMC 1 cut(s) 967
BstSNI TACGTA 1 cut(s) 377
BstUI CGCG 2 cut(s) 2073, 2337
BstV2I GAAGAC 3 cut(s) 524, 733, 1896
BstX2I RGATCY 1 cut(s) 259
BstXI CCANNNNNNTGG 1 cut(s) 1276
BstYI RGATCY 1 cut(s) 259
Bsu36I CCTNAGG 1 cut(s) 1614
BsuI GTATCC 3 cut(s) 1031, 2003, 3111
BsuRI GGCC 5 cut(s) 245, 416, 1137, 1476, 2050
BtgI CCRYGG 2 cut(s) 174, 2304
BtgZI GCGATG 1 cut(s) 632
BtrI CACGTC 2 cut(s) 3088, 3291
BtsIMutI CAGTG 6 cut(s) 78, 474, 1126, 2109, 2623, 2844
BveI ACCTGC 2 cut(s) 192, 2307
Cac8I GCNNGC 6 cut(s) 879, 1581, 1853, 1987, 2311, 2650
CaiI CAGNNNCTG 1 cut(s) 2885
CciI TCATGA 3 cut(s) 714, 756, 1056
CfoI GCGC 4 cut(s) 212, 1742, 1780, 2339
Cfr13I GGNCC 2 cut(s) 1808, 2048
CseI GACGC 2 cut(s) 2427, 2654
Csp6I GTAC 9 cut(s) 201, 987, 1370, 2036, 2118, 2602, 2638, 2728, 3467
CviQI GTAC 9 cut(s) 201, 987, 1370, 2036, 2118, 2602, 2638, 2728, 3467
DpnI GATC 7 cut(s) 261, 552, 1460, 3135, 3218, 3234, 3350
DpnII GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
DriI GACNNNNNGTC 1 cut(s) 3150
EaeI YGGCCR 2 cut(s) 243, 1135
Eam1104I CTCTTC 4 cut(s) 1551, 2070, 2323, 2703
Eam1105I GACNNNNNGTC 1 cut(s) 3150
EarI CTCTTC 4 cut(s) 1551, 2070, 2323, 2703
Ecl136II GAGCTC 1 cut(s) 2979
Eco105I TACGTA 1 cut(s) 377
Eco130I CCWWGG 3 cut(s) 174, 318, 1629
Eco24I GRGCYC 2 cut(s) 1088, 2981
Eco32I GATATC 2 cut(s) 720, 2588
Eco47I GGWCC 1 cut(s) 1808
Eco47III AGCGCT 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 2979
Eco57I CTGAAG 3 cut(s) 1575, 1721, 2727
Eco81I CCTNAGG 1 cut(s) 1614
Eco88I CYCGRG 4 cut(s) 745, 1181, 1708, 3040
EcoICRI GAGCTC 1 cut(s) 2979
EcoNI CCTNNNNNAGG 1 cut(s) 3240
EcoO109I RGGNCCY 1 cut(s) 2048
EcoRI GAATTC 1 cut(s) 1713
EcoRII CCWGG 6 cut(s) 416, 1132, 1401, 1485, 2053, 3321
EcoRV GATATC 2 cut(s) 720, 2588
EcoT14I CCWWGG 3 cut(s) 174, 318, 1629
EcoT22I ATGCAT 1 cut(s) 1195
EcoT38I GRGCYC 2 cut(s) 1088, 2981
ErhI CCWWGG 3 cut(s) 174, 318, 1629
FalI AAGNNNNNCTT 2 cut(s) 2177, 2209
FauNDI CATATG 4 cut(s) 991, 1195, 1969, 3367
FbaI TGATCA 1 cut(s) 550
FblI GTMKAC 2 cut(s) 2854, 3109
FriOI GRGCYC 2 cut(s) 1088, 2981
GlaI GCGC 4 cut(s) 211, 1741, 1779, 2338
GsuI CTGGAG 3 cut(s) 498, 588, 2037
HaeII RGCGCY 2 cut(s) 213, 1781
HaeIII GGCC 5 cut(s) 245, 416, 1137, 1476, 2050
HapII CCGG 2 cut(s) 924, 2896
HgaI GACGC 2 cut(s) 2427, 2654
HhaI GCGC 4 cut(s) 212, 1742, 1780, 2339
Hin6I GCGC 4 cut(s) 210, 1740, 1778, 2337
HinP1I GCGC 4 cut(s) 210, 1740, 1778, 2337
HincII GTYRAC 1 cut(s) 3288
HindII GTYRAC 1 cut(s) 3288
HindIII AAGCTT 1 cut(s) 912
HpaII CCGG 2 cut(s) 924, 2896
HphI GGTGA 9 cut(s) 605, 635, 697, 1421, 1649, 2521, 3074, 3191, 3328
Hpy166II GTNNAC 9 cut(s) 340, 864, 965, 1503, 2362, 2855, 3110, 3288, 3449
Hpy8I GTNNAC 9 cut(s) 340, 864, 965, 1503, 2362, 2855, 3110, 3288, 3449
HpyAV CCTTC 8 cut(s) 27, 622, 1204, 2200, 2347, 3058, 3371, 3518
HpyCH4IV ACGT 5 cut(s) 376, 2022, 3087, 3117, 3290
HpySE526I ACGT 5 cut(s) 376, 2022, 3087, 3117, 3290
HspAI GCGC 4 cut(s) 210, 1740, 1778, 2337
Ksp22I TGATCA 1 cut(s) 550
Kzo9I GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
LmnI GCTCC 4 cut(s) 812, 1841, 2951, 3325
MaeII ACGT 5 cut(s) 376, 2022, 3087, 3117, 3290
MaeIII GTNAC 3 cut(s) 472, 2562, 3245
MalI GATC 7 cut(s) 261, 552, 1460, 3135, 3218, 3234, 3350
MboI GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
MfeI CAATTG 2 cut(s) 834, 3165
MflI RGATCY 1 cut(s) 259
MhlI GDGCHC 5 cut(s) 967, 1088, 2293, 2397, 2981
MlsI TGGCCA 2 cut(s) 245, 1137
MluNI TGGCCA 2 cut(s) 245, 1137
MlyI GAGTC 5 cut(s) 219, 1886, 2067, 2340, 3020
MmeI TCCRAC 7 cut(s) 77, 92, 111, 1321, 1471, 2437, 3496
Mox20I TGGCCA 2 cut(s) 245, 1137
Mph1103I ATGCAT 1 cut(s) 1195
MroXI GAANNNNTTC 2 cut(s) 764, 2612
MscI TGGCCA 2 cut(s) 245, 1137
MslI CAYNNNNRTG 1 cut(s) 2400
Msp20I TGGCCA 2 cut(s) 245, 1137
MspA1I CMGCKG 2 cut(s) 2009, 2132
MspI CCGG 2 cut(s) 924, 2896
MspR9I CCNGG 7 cut(s) 418, 1134, 1403, 1487, 2055, 2897, 3323
MunI CAATTG 2 cut(s) 834, 3165
Mva1269I GAATGC 1 cut(s) 2221
MvaI CCWGG 6 cut(s) 418, 1134, 1403, 1487, 2055, 3323
MvnI CGCG 2 cut(s) 2073, 2337
NciI CCSGG 1 cut(s) 2897
NcoI CCATGG 1 cut(s) 174
NdeI CATATG 4 cut(s) 991, 1195, 1969, 3367
NdeII GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
NlaIV GGNNCC 4 cut(s) 85, 1491, 2407, 3327
NmuCI GTSAC 2 cut(s) 472, 3245
NsiI ATGCAT 1 cut(s) 1195
NspV TTCGAA 1 cut(s) 2997
OliI CACNNNNGTG 1 cut(s) 2400
PagI TCATGA 3 cut(s) 714, 756, 1056
PctI GAATGC 1 cut(s) 2221
PdmI GAANNNNTTC 2 cut(s) 764, 2612
PfeI GAWTC 6 cut(s) 13, 170, 1831, 2613, 3239, 3264
PfoI TCCNGGA 1 cut(s) 2053
PleI GAGTC 5 cut(s) 219, 1886, 2066, 2339, 3020
PpsI GAGTC 5 cut(s) 219, 1886, 2066, 2339, 3020
Ppu21I YACGTR 1 cut(s) 377
PsiI TTATAA 2 cut(s) 1152, 1859
Psp124BI GAGCTC 1 cut(s) 2981
Psp6I CCWGG 6 cut(s) 416, 1132, 1401, 1485, 2053, 3321
PspGI CCWGG 6 cut(s) 416, 1132, 1401, 1485, 2053, 3321
PspN4I GGNNCC 4 cut(s) 85, 1491, 2407, 3327
PspPI GGNCC 2 cut(s) 1808, 2048
PsrI GAACNNNNNNTAC 2 cut(s) 2541, 2573
PstI CTGCAG 5 cut(s) 367, 1147, 1333, 2318, 3412
PstNI CAGNNNCTG 1 cut(s) 2885
PsuI RGATCY 1 cut(s) 259
PvuII CAGCTG 2 cut(s) 2009, 2132
RsaI GTAC 9 cut(s) 202, 988, 1371, 2037, 2119, 2603, 2639, 2729, 3468
RsaNI GTAC 9 cut(s) 201, 987, 1370, 2036, 2118, 2602, 2638, 2728, 3467
RseI CAYNNNNRTG 1 cut(s) 2400
SacI GAGCTC 1 cut(s) 2981
Sau3AI GATC 7 cut(s) 259, 550, 1458, 3133, 3216, 3232, 3348
Sau96I GGNCC 2 cut(s) 1808, 2048
ScaI AGTACT 1 cut(s) 3468
SchI GAGTC 5 cut(s) 219, 1886, 2067, 2340, 3020
ScrFI CCNGG 7 cut(s) 418, 1134, 1403, 1487, 2055, 2897, 3323
SduI GDGCHC 5 cut(s) 967, 1088, 2293, 2397, 2981
SfcI CTRYAG 9 cut(s) 363, 1143, 1329, 1683, 2010, 2121, 2314, 2427, 3408
SfuI TTCGAA 1 cut(s) 2997
SinI GGWCC 1 cut(s) 1808
SmiMI CAYNNNNRTG 1 cut(s) 2400
SmlI CTYRAG 2 cut(s) 2398, 3524
SmoI CTYRAG 2 cut(s) 2398, 3524
SnaBI TACGTA 1 cut(s) 377
SpeI ACTAGT 1 cut(s) 1874
SsiI CCGC 5 cut(s) 1350, 1989, 2071, 2335, 2492
SspI AATATT 3 cut(s) 1290, 1525, 2838
SstI GAGCTC 1 cut(s) 2981
StyD4I CCNGG 7 cut(s) 416, 1132, 1401, 1485, 2053, 2895, 3321
StyI CCWWGG 3 cut(s) 174, 318, 1629
TaiI ACGT 5 cut(s) 379, 2025, 3090, 3120, 3293
TaqI TCGA 4 cut(s) 2997, 3200, 3457, 3537
TatI WGTACW 5 cut(s) 986, 1369, 2601, 2727, 3466
TauI GCSGC 2 cut(s) 2073, 2495
TfiI GAWTC 6 cut(s) 13, 170, 1831, 2613, 3239, 3264
TscAI CASTG 6 cut(s) 78, 481, 1126, 2109, 2623, 2851
TseFI GTSAC 2 cut(s) 472, 3245
Tsp45I GTSAC 2 cut(s) 472, 3245
TspDTI ATGAA 9 cut(s) 757, 773, 1588, 1743, 2223, 2400, 2621, 3026, 3427
TspGWI ACGGA 1 cut(s) 2598
TspRI CASTG 6 cut(s) 78, 481, 1126, 2109, 2623, 2851
VneI GTGCAC 1 cut(s) 963
VpaK11BI GGWCC 1 cut(s) 1808
XagI CCTNNNNNAGG 1 cut(s) 3240
XapI RAATTY 6 cut(s) 1595, 1713, 1912, 3000, 3077, 3513
XmiI GTMKAC 2 cut(s) 2854, 3109
XmnI GAANNNNTTC 2 cut(s) 764, 2612
ZrmI AGTACT 1 cut(s) 3468
Zsp2I ATGCAT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.