FvH4_5g02900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000150
Physical Location & Seq
Reverse (-)
1737116 .. 1741422
4307 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02900.t1

Sequence Viewer

Length: 1941 bp
ATGGAGAAGTTGGAGTCTAAAACTGTTTATTTTCTGGTGCAATTTGTTGGAGATGGGCCGGGACATGGCATGTATGAAGTGAAGATAGAAGGAGGACAAATCCTGGGAAAAATTGGAGGACCACTTGATCTTGTAGGAAAGTTTTTTGATAGGAGTGATCCTGAGGTTCCCAAGGATTATCTCTTGAGTGCTACCAGGTTCGGCAGCTGCTCTAAGTTGTATTTATTGCAACACGTAGGGGATGACGGTTGGTGGCTCAGGCAGAGCAGCACCCGCAGCCACGATGCATATAAAGGACGGGTATTTGACACAGTGAGCAAGAGTTTGATGCCGTTCAAGCTGCCTAAAGTTAAGAAAGAGGCACTTTTGATTTCAGCTTATGGCAAGCTTTATCACATTGCACATCCATCAACGCATATGCCAGAACCCTCTTTTGAGGTATATGATCCAGATACCGGCTCCTGGACCACGCTCTCTACATTCCCTGACAATCGTTTGTCTCACATTGATGGTTATGCTGTTTGTTACGACTGTATTTTGATGTCTATAGATGACCGAGGTAACTTCTGGGTATATCAGGTGACTTTGAATCAATGGAAACGAGTTAAAATCCCAACTGACAGAGACTCAAATGATTATTATCCTTTCCATGGTAGAGCTGTGGTTGTAGGCCGTACTATATACGCCTTATCTTTATACGGGGATGTTATGGCATATTCTCTGATGATGGAAGAGTTGGCTGATGGTAGTATCAACTACTCTCTGGACAAACCAGTCTGGTTGCATGGCTTGCGTAGTCTTTTTTTCAGGGATGCCAAATGTGAGCCAATAAGAACAGAGTGTTTGGTTCATTTGGGGGGCTTGAACTTTTGCCTTTTGCAAACTGTCGAACGAGATTTTAGTTTCCAACGAGTGTGGATCACTATTTTTGATGTTGTTTCCAGTGGAGGAATAAAGCGTATACGTACTCTAGGTAGTACTATGCGTAAAGTGGCTATTAAGGGTCTGGGTTGTTTCTTCATTGAATCTGGATTCTGTCTAGAGTGTGAAGATTTAGAACCCAAAGGGAGAGATACTATGACTACCGCTAGGAATATGCAGCCAACTGATGCTCCTCGATTGCACAAGCATGAAAAGGCTACACTCAAGATTTTAAGGAGGCAGATTCGCAGACAGAAAAGAAAGATGATGAATCAAAGGTCAAAGAGGTTGGCCGTGATGCAAAAGGTGTTCAGACTCCATCGATATGACTCCATCGATATGGTAAAGGACGTGAAATCTAAAGTTTTAGTTGGAGGCTCGATGTTCTGCTGGCATGTACTCTCTCACTATGTTAAATTTACAATGAGATGCTATAATGCCACTCGCCAAGTCAGCCACCAGTGTATTTTGGCTCCTATCTTCCTCACCTACAATGAAGAAAAACAAAGAATTTTACTGTTCTATGAGAGGTATGACTACTTGTTTGATGCTTGGAATGGAGGACATGATATTTGGTGGCAGCAAGCTTTACATTTTGATATCTATGTCCAGAAGTTGATCACTCATCCATATGCCAAAGATTTTAAGCAATGCATGAATGAGTTCCAAGATATACATATGCTCGACGGACAGAAACGCTTGATGAGGCCACTAAGAGTGGTAACAAGACATGCAGATTTCGGTCCTTATCGTGGTTGGATGAGAACGATAAGAAACAGCAGGGCTACTCATTTAAAGAAGGCTTTGCCAAAAGGGGCGGGTGAAGGAGAACGGTCTACATTCAGAGAAGAGGACATTGACACATTGATCAAATTCTTGAGAAACATCAATGAGCATAGAGGGAAAACTAGGGACCAAGTTGACAAGTACTTCCAAGCTGTTTATAAGGAAGTTAAGAGACTATTTCCAGGATTGTTATCTGTGGTTCATGAGAAGATTAGGATACGGAGGGGTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

647

Amino Acids

75.32

Weight (kDa)

9.44

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1866
AasI GACNNNNNNGTC 1 cut(s) 773
Acc65I GGTACC 1 cut(s) 1934
AccB1I GGYRCC 1 cut(s) 1934
AccI GTMKAC 2 cut(s) 961, 1757
AciI CCGC 3 cut(s) 274, 1086, 1739
AclWI GGATC 3 cut(s) 152, 440, 926
AcoI YGGCCR 1 cut(s) 1212
AcsI RAATTY 3 cut(s) 1337, 1431, 1793
AfaI GTAC 6 cut(s) 676, 967, 979, 1320, 1850, 1936
AfiI CCNNNNNNNGG 5 cut(s) 65, 455, 462, 650, 1673
AflIII ACRYGT 1 cut(s) 232
AgsI TTSAA 4 cut(s) 337, 589, 865, 1025
AjiI CACGTC 1 cut(s) 1273
AjnI CCWGG 4 cut(s) 102, 194, 461, 1888
AluBI AGCT 7 cut(s) 207, 340, 377, 388, 659, 1508, 1859
AluI AGCT 7 cut(s) 207, 340, 377, 388, 659, 1508, 1859
Alw26I GTCTC 3 cut(s) 504, 618, 1873
AlwI GGATC 3 cut(s) 152, 440, 926
AoxI GGCC 4 cut(s) 56, 670, 1212, 1628
ApeKI GCWGC 7 cut(s) 204, 207, 267, 276, 340, 1099, 1501
ApoI RAATTY 3 cut(s) 1337, 1431, 1793
ArsI GACNNNNNNTTYG 4 cut(s) 1448, 1476, 1480, 1508
Asp700I GAANNNNTTC 1 cut(s) 1583
Asp718I GGTACC 1 cut(s) 1934
AspS9I GGNCC 5 cut(s) 56, 119, 465, 1664, 1834
AsuC2I CCSGG 1 cut(s) 60
AsuHPI GGTGA 3 cut(s) 592, 1399, 1754
AvaII GGWCC 4 cut(s) 119, 465, 1664, 1834
AxyI CCTNAGG 1 cut(s) 162
BanI GGYRCC 1 cut(s) 1934
BbvI GCAGC 7 cut(s) 194, 216, 279, 288, 327, 1111, 1513
BccI CCATC 7 cut(s) 47, 415, 503, 721, 737, 1248, 1262
BceAI ACGGC 3 cut(s) 316, 657, 1199
BciT130I CCWGG 4 cut(s) 104, 196, 463, 1890
BciVI GTATCC 1 cut(s) 1917
BclI TGATCA 2 cut(s) 1539, 1788
BcnI CCSGG 1 cut(s) 60
BcoDI GTCTC 3 cut(s) 504, 618, 1873
BfaI CTAG 5 cut(s) 971, 1040, 1089, 1830, 1939
BfmI CTRYAG 1 cut(s) 546
BfuI GTATCC 1 cut(s) 1917
BisI GCNGC 7 cut(s) 205, 208, 268, 277, 341, 1100, 1502
BlsI GCNGC 7 cut(s) 206, 209, 269, 278, 342, 1101, 1503
BmcAI AGTACT 2 cut(s) 979, 1850
Bme1390I CCNGG 5 cut(s) 60, 104, 196, 463, 1890
Bme18I GGWCC 4 cut(s) 119, 465, 1664, 1834
BmgBI CACGTC 1 cut(s) 1273
BmgT120I GGNCC 5 cut(s) 56, 119, 465, 1664, 1834
BmiI GGNNCC 5 cut(s) 168, 460, 1395, 1835, 1936
BmrFI CCNGG 5 cut(s) 60, 104, 196, 463, 1890
BmsI GCATC 7 cut(s) 274, 318, 802, 1099, 1209, 1340, 1459
Bpu10I CCTNAGC 1 cut(s) 257
BpuEI CTTGAG 3 cut(s) 205, 1130, 1819
BpuMI CCSGG 1 cut(s) 60
Bsa29I ATCGAT 2 cut(s) 1243, 1257
BsaAI YACGTR 2 cut(s) 235, 965
BsaBI GATNNNNATC 2 cut(s) 639, 1897
BsaJI CCNNGG 4 cut(s) 103, 171, 556, 649
BsaXI ACNNNNNCTCC 2 cut(s) 1096, 1126
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 455, 462, 650, 1673
Bse118I RCCGGY 1 cut(s) 455
Bse1I ACTGG 3 cut(s) 773, 942, 1381
Bse21I CCTNAGG 1 cut(s) 162
Bse3DI GCAATG 2 cut(s) 396, 1577
Bse8I GATNNNNATC 2 cut(s) 639, 1897
BseBI CCWGG 4 cut(s) 104, 196, 463, 1890
BseCI ATCGAT 2 cut(s) 1243, 1257
BseDI CCNNGG 4 cut(s) 103, 171, 556, 649
BseGI GGATG 6 cut(s) 247, 403, 709, 817, 1546, 1686
BseJI GATNNNNATC 2 cut(s) 639, 1897
BseLI CCNNNNNNNGG 5 cut(s) 65, 455, 462, 650, 1673
BseMI GCAATG 2 cut(s) 396, 1577
BseMII CTCAG 2 cut(s) 153, 271
BseNI ACTGG 3 cut(s) 773, 942, 1381
BseRI GAGGAG 1 cut(s) 1104
BseXI GCAGC 7 cut(s) 194, 216, 279, 288, 327, 1111, 1513
BshFI GGCC 4 cut(s) 58, 672, 1214, 1630
BshNI GGYRCC 1 cut(s) 1934
BshVI ATCGAT 2 cut(s) 1243, 1257
BsiSI CCGG 2 cut(s) 59, 456
BslFI GGGAC 2 cut(s) 75, 1847
BslI CCNNNNNNNGG 5 cut(s) 65, 455, 462, 650, 1673
BsmAI GTCTC 3 cut(s) 504, 618, 1873
BsmFI GGGAC 2 cut(s) 75, 1847
BsnI GGCC 4 cut(s) 58, 672, 1214, 1630
Bsp143I GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
Bsp19I CCATGG 1 cut(s) 649
BspACI CCGC 3 cut(s) 274, 1086, 1739
BspANI GGCC 4 cut(s) 58, 672, 1214, 1630
BspCNI CTCAG 2 cut(s) 154, 270
BspDI ATCGAT 2 cut(s) 1243, 1257
BspHI TCATGA 1 cut(s) 1909
BspLI GGNNCC 5 cut(s) 168, 460, 1395, 1835, 1936
BspPI GGATC 3 cut(s) 152, 440, 926
BspT107I GGYRCC 1 cut(s) 1934
BsrDI GCAATG 2 cut(s) 396, 1577
BsrFI RCCGGY 1 cut(s) 455
BsrI ACTGG 3 cut(s) 773, 942, 1381
BssAI RCCGGY 1 cut(s) 455
BssECI CCNNGG 4 cut(s) 103, 171, 556, 649
BssMI GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
BssNAI GTATAC 1 cut(s) 962
BssT1I CCWWGG 2 cut(s) 171, 649
Bst1107I GTATAC 1 cut(s) 962
Bst2UI CCWGG 4 cut(s) 104, 196, 463, 1890
Bst4CI ACNGT 7 cut(s) 25, 248, 313, 533, 886, 1440, 1755
Bst6I CTCTTC 2 cut(s) 726, 1764
BstAPI GCANNNNNTGC 1 cut(s) 790
BstBAI YACGTR 2 cut(s) 235, 965
BstC8I GCNNGC 4 cut(s) 386, 791, 1313, 1506
BstDEI CTNAG 4 cut(s) 162, 213, 257, 1634
BstDSI CCRYGG 1 cut(s) 649
BstF5I GGATG 6 cut(s) 247, 403, 709, 817, 1546, 1686
BstKTI GATC 6 cut(s) 130, 160, 448, 921, 1542, 1791
BstMAI GTCTC 3 cut(s) 504, 618, 1873
BstMBI GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
BstMWI GCNNNNNNNGC 5 cut(s) 273, 276, 337, 790, 1374
BstNI CCWGG 4 cut(s) 104, 196, 463, 1890
BstNSI RCATGY 3 cut(s) 73, 1319, 1655
BstSCI CCNGG 5 cut(s) 58, 102, 194, 461, 1888
BstSFI CTRYAG 1 cut(s) 546
BstSNI TACGTA 1 cut(s) 965
BstV1I GCAGC 7 cut(s) 194, 216, 279, 288, 327, 1111, 1513
BstXI CCANNNNNNTGG 1 cut(s) 1261
BstZ17I GTATAC 1 cut(s) 962
Bsu15I ATCGAT 2 cut(s) 1243, 1257
Bsu36I CCTNAGG 1 cut(s) 162
BsuI GTATCC 1 cut(s) 1917
BsuRI GGCC 4 cut(s) 58, 672, 1214, 1630
BsuTUI ATCGAT 2 cut(s) 1243, 1257
BtgI CCRYGG 1 cut(s) 649
BtrI CACGTC 1 cut(s) 1273
BtsCI GGATG 6 cut(s) 247, 403, 709, 817, 1546, 1686
BtsIMutI CAGTG 3 cut(s) 318, 949, 1388
Cac8I GCNNGC 4 cut(s) 386, 791, 1313, 1506
CciI TCATGA 1 cut(s) 1909
Cfr10I RCCGGY 1 cut(s) 455
Cfr13I GGNCC 5 cut(s) 56, 119, 465, 1664, 1834
ClaI ATCGAT 2 cut(s) 1243, 1257
CsiI ACCWGGT 1 cut(s) 194
Csp6I GTAC 6 cut(s) 675, 966, 978, 1319, 1849, 1935
CspCI CAANNNNNGTGG 2 cut(s) 896, 931
CviQI GTAC 6 cut(s) 675, 966, 978, 1319, 1849, 1935
DdeI CTNAG 4 cut(s) 162, 213, 257, 1634
DpnI GATC 6 cut(s) 129, 159, 447, 920, 1541, 1790
DpnII GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
DraI TTTAAA 1 cut(s) 1716
DrdI GACNNNNNNGTC 1 cut(s) 773
DseDI GACNNNNNNGTC 1 cut(s) 773
EaeI YGGCCR 1 cut(s) 1212
Eam1104I CTCTTC 2 cut(s) 726, 1764
EarI CTCTTC 2 cut(s) 726, 1764
Eco105I TACGTA 1 cut(s) 965
Eco130I CCWWGG 2 cut(s) 171, 649
Eco32I GATATC 1 cut(s) 1522
Eco47I GGWCC 4 cut(s) 119, 465, 1664, 1834
Eco81I CCTNAGG 1 cut(s) 162
EcoRII CCWGG 4 cut(s) 102, 194, 461, 1888
EcoRV GATATC 1 cut(s) 1522
EcoT14I CCWWGG 2 cut(s) 171, 649
EcoT22I ATGCAT 2 cut(s) 289, 1577
ErhI CCWWGG 2 cut(s) 171, 649
FalI AAGNNNNNCTT 2 cut(s) 348, 380
FaqI GGGAC 2 cut(s) 75, 1847
FauI CCCGC 2 cut(s) 281, 1732
FauNDI CATATG 3 cut(s) 417, 1552, 1599
FbaI TGATCA 2 cut(s) 1539, 1788
FblI GTMKAC 2 cut(s) 961, 1757
Fnu4HI GCNGC 7 cut(s) 205, 208, 268, 277, 341, 1100, 1502
FokI GGATG 6 cut(s) 254, 390, 716, 824, 1533, 1693
Fsp4HI GCNGC 7 cut(s) 205, 208, 268, 277, 341, 1100, 1502
FspBI CTAG 5 cut(s) 971, 1040, 1089, 1830, 1939
GluI GCNGC 7 cut(s) 205, 208, 268, 277, 341, 1100, 1502
HaeIII GGCC 4 cut(s) 58, 672, 1214, 1630
HapII CCGG 2 cut(s) 59, 456
HincII GTYRAC 1 cut(s) 1843
HindII GTYRAC 1 cut(s) 1843
HindIII AAGCTT 2 cut(s) 386, 1506
HinfI GANTC 9 cut(s) 14, 589, 626, 1025, 1032, 1165, 1192, 1236, 1250
HpaII CCGG 2 cut(s) 59, 456
HphI GGTGA 3 cut(s) 592, 1399, 1754
Hpy166II GTNNAC 3 cut(s) 962, 1758, 1843
Hpy188I TCNGA 3 cut(s) 723, 1235, 1766
Hpy8I GTNNAC 3 cut(s) 962, 1758, 1843
Hpy99I CGWCG 1 cut(s) 1610
HpyAV CCTTC 3 cut(s) 83, 1714, 1739
HpyCH4III ACNGT 7 cut(s) 25, 248, 313, 533, 886, 1440, 1755
HpyCH4IV ACGT 3 cut(s) 234, 964, 1272
HpyF10VI GCNNNNNNNGC 5 cut(s) 273, 276, 337, 790, 1374
HpyF3I CTNAG 4 cut(s) 162, 213, 257, 1634
HpySE526I ACGT 3 cut(s) 234, 964, 1272
KpnI GGTACC 1 cut(s) 1938
Ksp22I TGATCA 2 cut(s) 1539, 1788
Kzo9I GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
LmnI GCTCC 3 cut(s) 464, 1117, 1399
Lsp1109I GCAGC 7 cut(s) 194, 216, 279, 288, 327, 1111, 1513
LweI GCATC 7 cut(s) 274, 318, 802, 1099, 1209, 1340, 1459
MabI ACCWGGT 1 cut(s) 194
MaeI CTAG 5 cut(s) 971, 1040, 1089, 1830, 1939
MaeII ACGT 3 cut(s) 234, 964, 1272
MaeIII GTNAC 4 cut(s) 524, 560, 580, 1642
MalI GATC 6 cut(s) 129, 159, 447, 920, 1541, 1790
MboI GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
MboII GAAGA 8 cut(s) 94, 743, 1009, 1061, 1393, 1430, 1781, 1927
MluCI AATT 5 cut(s) 41, 111, 1337, 1431, 1793
MlyI GAGTC 4 cut(s) 23, 620, 1230, 1244
MmeI TCCRAC 4 cut(s) 28, 931, 1273, 1658
Mph1103I ATGCAT 2 cut(s) 289, 1577
MroXI GAANNNNTTC 1 cut(s) 1583
MseI TTAA 8 cut(s) 351, 606, 999, 1154, 1335, 1566, 1715, 1875
MslI CAYNNNNRTG 5 cut(s) 507, 1128, 1245, 1259, 1551
MspA1I CMGCKG 1 cut(s) 207
MspI CCGG 2 cut(s) 59, 456
MspR9I CCNGG 5 cut(s) 60, 104, 196, 463, 1890
MvaI CCWGG 4 cut(s) 104, 196, 463, 1890
MwoI GCNNNNNNNGC 5 cut(s) 273, 276, 337, 790, 1374
NciI CCSGG 1 cut(s) 60
NcoI CCATGG 1 cut(s) 649
NdeI CATATG 3 cut(s) 417, 1552, 1599
NdeII GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
NlaIV GGNNCC 5 cut(s) 168, 460, 1395, 1835, 1936
NmuCI GTSAC 1 cut(s) 580
NsiI ATGCAT 2 cut(s) 289, 1577
NspI RCATGY 3 cut(s) 73, 1319, 1655
PagI TCATGA 1 cut(s) 1909
PdmI GAANNNNTTC 1 cut(s) 1583
PfeI GAWTC 5 cut(s) 589, 1025, 1032, 1165, 1192
PfoI TCCNGGA 2 cut(s) 461, 1888
PkrI GCNGC 7 cut(s) 206, 209, 269, 278, 342, 1101, 1503
PleI GAGTC 4 cut(s) 22, 620, 1230, 1244
PpsI GAGTC 4 cut(s) 22, 620, 1230, 1244
Ppu21I YACGTR 2 cut(s) 235, 965
PsiI TTATAA 1 cut(s) 1866
Psp6I CCWGG 4 cut(s) 102, 194, 461, 1888
PspGI CCWGG 4 cut(s) 102, 194, 461, 1888
PspN4I GGNNCC 5 cut(s) 168, 460, 1395, 1835, 1936
PspPI GGNCC 5 cut(s) 56, 119, 465, 1664, 1834
PvuII CAGCTG 1 cut(s) 207
RsaI GTAC 6 cut(s) 676, 967, 979, 1320, 1850, 1936
RsaNI GTAC 6 cut(s) 675, 966, 978, 1319, 1849, 1935
RseI CAYNNNNRTG 5 cut(s) 507, 1128, 1245, 1259, 1551
SaqAI TTAA 8 cut(s) 351, 606, 999, 1154, 1335, 1566, 1715, 1875
SatI GCNGC 7 cut(s) 205, 208, 268, 277, 341, 1100, 1502
Sau3AI GATC 6 cut(s) 127, 157, 445, 918, 1539, 1788
Sau96I GGNCC 5 cut(s) 56, 119, 465, 1664, 1834
ScaI AGTACT 2 cut(s) 979, 1850
SchI GAGTC 4 cut(s) 23, 620, 1230, 1244
ScrFI CCNGG 5 cut(s) 60, 104, 196, 463, 1890
SexAI ACCWGGT 1 cut(s) 194
SfaNI GCATC 7 cut(s) 274, 318, 802, 1099, 1209, 1340, 1459
SfcI CTRYAG 1 cut(s) 546
SinI GGWCC 4 cut(s) 119, 465, 1664, 1834
SmiMI CAYNNNNRTG 5 cut(s) 507, 1128, 1245, 1259, 1551
SmlI CTYRAG 3 cut(s) 184, 1145, 1798
SmoI CTYRAG 3 cut(s) 184, 1145, 1798
SnaBI TACGTA 1 cut(s) 965
Sse9I AATT 5 cut(s) 41, 111, 1337, 1431, 1793
SsiI CCGC 3 cut(s) 274, 1086, 1739
SspMI CTAG 5 cut(s) 971, 1040, 1089, 1830, 1939
StyD4I CCNGG 5 cut(s) 58, 102, 194, 461, 1888
StyI CCWWGG 2 cut(s) 171, 649
TaaI ACNGT 7 cut(s) 25, 248, 313, 533, 886, 1440, 1755
TaiI ACGT 3 cut(s) 237, 967, 1275
TaqI TCGA 6 cut(s) 888, 1117, 1243, 1257, 1301, 1605
TaqII GACCGA 2 cut(s) 570, 1652
TasI AATT 5 cut(s) 41, 111, 1337, 1431, 1793
TatI WGTACW 3 cut(s) 977, 1318, 1848
TfiI GAWTC 5 cut(s) 589, 1025, 1032, 1165, 1192
Tru1I TTAA 8 cut(s) 351, 606, 999, 1154, 1335, 1566, 1715, 1875
Tru9I TTAA 8 cut(s) 351, 606, 999, 1154, 1335, 1566, 1715, 1875
TscAI CASTG 3 cut(s) 318, 949, 1388
TseFI GTSAC 1 cut(s) 580
TseI GCWGC 7 cut(s) 204, 207, 267, 276, 340, 1099, 1501
Tsp45I GTSAC 1 cut(s) 580
TspDTI ATGAA 8 cut(s) 90, 839, 1009, 1146, 1205, 1431, 1592, 1898
TspGWI ACGGA 1 cut(s) 1623
TspRI CASTG 3 cut(s) 318, 949, 1388
VpaK11BI GGWCC 4 cut(s) 119, 465, 1664, 1834
XapI RAATTY 3 cut(s) 1337, 1431, 1793
XbaI TCTAGA 1 cut(s) 1039
XceI RCATGY 3 cut(s) 73, 1319, 1655
XmiI GTMKAC 2 cut(s) 961, 1757
XmnI GAANNNNTTC 1 cut(s) 1583
XspI CTAG 5 cut(s) 971, 1040, 1089, 1830, 1939
ZrmI AGTACT 2 cut(s) 979, 1850
Zsp2I ATGCAT 2 cut(s) 289, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.