RchiOBHm_Chr1g0378721

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000150
Physical Location & Seq
Forward (+)
65096867 .. 65102348
5482 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60212

Sequence Viewer

Length: 1953 bp
ATGGCCGGAGATGACGTTTTGCCGCCTCAAATCCACATGAAGGGAGGGGAGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGGGAACAACGGGCGACATGAGCCGTCCCCGTCCCGATTGTCATGATATGTCACCGCCTTGTGAAGTCTGTCACCGGCGATTTCCCGACAACATCACCCTCCAAATACATAGGGAGAATGTCCATGTGCTTCATATTTGTGAGATATGTGGATTATCGTTTTACTCTGATACTCTCCTCCAAACACATAAGCAGTGTGTGCATACGCTTCATACGTGTGAGATATGTGGAGTATCGTTTCGCTCTGATGCTCAACTCCAGAGTCATAGGAAATCCAAACATCCGGATTTAAAGAAGAAAAAGATGATGAAGAAGAAGAAGAAGAAGAAGAGGCAGAAGAAGAAGAAGAAGAATGAGGAGGAGGAGGAGGAGGAGAAGGCGAAGGCGGAGGGGGAGCATGCCAGCAGCTTCCCCATAGAGAAGACGATGAACAAGGCGCCCTCACCCTCATCCTCAATTTCTGGCGAGAGCTTCCCCATTGAAAAGACGATGTACAAGGCGCCCTCACCCTCAATTTCTGGCGAGAGCTTTCCCATGGAGAAGATGGACCAGGCAGAATCTATACTTATTATGGTGAAGTTTGACATGGATGATTCATTTTCTGGCGCAATATACGAAATCAAACTTGACCAACTTCAGCCACTTGAGCATGGTAAATCTGTGGGCGGATCTAACACTGACCCTTCAACTCTACCAATGCTCAAACCTGTAGCAGAGTTATTTGGTAAGGGCTGGAAGACGGAGGAGCTCTTTTTATTTGATTGTGCTAGAATTGGCAGCCTCTCCAAGTTATATGTTTTGGTAAATCAAATCCCATGCCCTTATCTGAAGCCTGTCACTCCCGAGTATGCATTTGCCTTCGACAGAAGCTTAGTTTCAGAACTGATTTCTCCACCAAAGACAACCAAGCAGTATTGTCTTGTTATATCGGCATATGGGATGTTGTACTATCTTGCACAGCCATTGTGCTTTCCTCAGATCCAAGAACCGTCATTTGAGCGGTATGATCCGGCCAGTGATTCATGGGAGTCATTGCCTCCTTTCCCAGATTATTCTCTAGATCAGGCACAGACCGAGATGACCGGTTATGCCGTTTGTTATGGATATATACTATTGTCCATGCAAACTGAGAAGAAATATGAAGCGGTGGCTTTTCATATTCATAGCAGAACATGGCACAAGGTGAAGACTAGTCCAGAGAATCCTTATTATTATCCCTTCTATGGGAGGGCAGTGGTTTTAGGTAGTACTATCTATGCCTTGGCGCATAATCTTGATTTGGTTCTGGTCTTCTCTTTCTGGTGGGATTCAGACAAGGATGGTGACATTGTTAAGCGGCGACATTTTCTGGGCACCCCATTGTCTCTGTTAATAACAGCCAAGTGTCATCCGCCGCGCAGGTTACTAGGGGATAGAACTCAGAATTTGGTTCATTTAGGGGGGCGATACTTTTGTGTTGTGCAAACTGGTCAGAACATTGATTCTTCTGAGTATCAGTATATGTGTGCGACGACCTTCAGAATTGCCGGTGATGGGCAAGAAATGCATATCAAGACTGTTCGCTCATCCGTTTTTCGAGTCGCGATCGAAGGGAATGATGAATTTGAAGTTCAGTTCAGCTTCACACCAGATTGCAATGACATTGAACCAGTGGAAGAACAGTACTGTGTGTCTAGTGCATTGGTTGAAAGGGAAAGTGCGTGGACTTCGGATGTCAAAGAAGACTTCTTTTCCTTCCCAACTGGTCCTAAACTGGGATTAGAGGCATTTAGAGCCAAGAAAGAAGACGAAAAAAAAGTGTTCATCTCCACTACTTCACCTGAGACTCCTCTCCTTTCCAAAGGTTCAAAAAAGAAGAAAAAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

650

Amino Acids

73.98

Weight (kDa)

8.49

Isoelectric Point (pI)

58.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 341 - 535 5.2e-07 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1473
AccB1I GGYRCC 3 cut(s) 520, 583, 1436
AccBSI CCGCTC 1 cut(s) 1084
AccII CGCG 2 cut(s) 1480, 1667
AccIII TCCGGA 1 cut(s) 367
AciI CCGC 9 cut(s) 23, 140, 470, 750, 1084, 1229, 1420, 1475, 1478
AclWI GGATC 3 cut(s) 760, 1057, 1085
AcoI YGGCCR 2 cut(s) 3, 1095
AcsI RAATTY 2 cut(s) 1507, 1685
AcuI CTGAAG 3 cut(s) 704, 932, 1585
AcyI GRCGYC 2 cut(s) 521, 584
AdeI CACNNNGTG 1 cut(s) 1267
AfaI GTAC 4 cut(s) 578, 1031, 1333, 1748
AfiI CCNNNNNNNGG 5 cut(s) 40, 1307, 1308, 1617, 1838
AflIII ACRYGT 1 cut(s) 299
AgeI ACCGGT 1 cut(s) 1166
AgsI TTSAA 6 cut(s) 566, 771, 1691, 1730, 1772, 1932
AhlI ACTAGT 1 cut(s) 1274
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 6 cut(s) 492, 555, 612, 832, 954, 1704
AluI AGCT 6 cut(s) 492, 555, 612, 832, 954, 1704
Alw21I GWGCWC 1 cut(s) 834
Alw26I GTCTC 2 cut(s) 1452, 1901
AlwI GGATC 3 cut(s) 760, 1057, 1085
Ama87I CYCGRG 1 cut(s) 926
Aor13HI TCCGGA 1 cut(s) 367
AoxI GGCC 2 cut(s) 3, 1095
ApeKI GCWGC 2 cut(s) 489, 861
ApoI RAATTY 2 cut(s) 1507, 1685
AsiGI ACCGGT 1 cut(s) 1166
AspLEI GCGC 5 cut(s) 523, 586, 692, 1351, 1482
AspS9I GGNCC 2 cut(s) 631, 1829
AvaI CYCGRG 1 cut(s) 926
AvaII GGWCC 2 cut(s) 631, 1829
BaeGI GKGCMC 1 cut(s) 1439
BaeI ACNNNNGTAYC 2 cut(s) 1522, 1555
BanI GGYRCC 3 cut(s) 520, 583, 1436
BanII GRGCYC 1 cut(s) 834
BbsI GAAGAC 6 cut(s) 512, 827, 1277, 1366, 1812, 1875
Bbv12I GWGCWC 1 cut(s) 834
BbvI GCAGC 2 cut(s) 501, 873
BccI CCATC 3 cut(s) 622, 1397, 1610
BceAI ACGGC 2 cut(s) 93, 1160
BciT130I CCWGG 1 cut(s) 635
BcoDI GTCTC 2 cut(s) 1452, 1901
BcuI ACTAGT 1 cut(s) 1274
BfaI CTAG 5 cut(s) 852, 1142, 1275, 1490, 1758
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 2 cut(s) 524, 587
BfuAI ACCTGC 1 cut(s) 1473
BisI GCNGC 5 cut(s) 23, 490, 862, 1421, 1478
BlsI GCNGC 5 cut(s) 24, 491, 863, 1422, 1479
BmcAI AGTACT 2 cut(s) 1333, 1748
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 2 cut(s) 631, 1829
BmeT110I CYCGRG 1 cut(s) 926
BmgT120I GGNCC 2 cut(s) 631, 1829
BmiI GGNNCC 3 cut(s) 522, 585, 1438
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 1847
BmsI GCATC 1 cut(s) 322
BmuI ACTGGG 1 cut(s) 1847
BpiI GAAGAC 6 cut(s) 512, 827, 1277, 1366, 1812, 1875
BpmI CTGGAG 1 cut(s) 326
BpuEI CTTGAG 1 cut(s) 749
BsaAI YACGTR 1 cut(s) 300
BsaHI GRCGYC 2 cut(s) 521, 584
BsaJI CCNNGG 2 cut(s) 618, 1344
BsaWI WCCGGW 2 cut(s) 367, 1166
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 1307, 1308, 1617, 1838
Bse118I RCCGGY 3 cut(s) 159, 1166, 1610
Bse1I ACTGG 5 cut(s) 1098, 1555, 1733, 1831, 1842
Bse3DI GCAATG 2 cut(s) 1115, 1726
BseAI TCCGGA 1 cut(s) 367
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 2 cut(s) 618, 1344
BseGI GGATG 8 cut(s) 364, 533, 679, 1029, 1408, 1471, 1649, 1801
BseLI CCNNNNNNNGG 5 cut(s) 40, 1307, 1308, 1617, 1838
BseMI GCAATG 2 cut(s) 1115, 1726
BseMII CTCAG 5 cut(s) 1073, 1203, 1517, 1563, 1896
BseNI ACTGG 5 cut(s) 1098, 1555, 1733, 1831, 1842
BseRI GAGGAG 9 cut(s) 251, 455, 458, 461, 464, 467, 470, 842, 1902
BseSI GKGCMC 1 cut(s) 1439
BseXI GCAGC 2 cut(s) 501, 873
Bsh1236I CGCG 2 cut(s) 1480, 1667
Bsh1285I CGRYCG 1 cut(s) 1671
BshFI GGCC 2 cut(s) 5, 1097
BshNI GGYRCC 3 cut(s) 520, 583, 1436
BshTI ACCGGT 1 cut(s) 1166
BsiEI CGRYCG 1 cut(s) 1671
BsiHKAI GWGCWC 1 cut(s) 834
BsiHKCI CYCGRG 1 cut(s) 926
BsiSI CCGG 6 cut(s) 6, 160, 368, 1094, 1167, 1611
BslFI GGGAC 2 cut(s) 96, 102
BslI CCNNNNNNNGG 5 cut(s) 40, 1307, 1308, 1617, 1838
BsmAI GTCTC 2 cut(s) 1452, 1901
BsmFI GGGAC 2 cut(s) 96, 102
BsnI GGCC 2 cut(s) 5, 1097
BsoBI CYCGRG 1 cut(s) 926
Bsp1286I GDGCHC 2 cut(s) 834, 1439
Bsp13I TCCGGA 1 cut(s) 367
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
Bsp19I CCATGG 1 cut(s) 618
Bsp68I TCGCGA 1 cut(s) 1667
BspACI CCGC 9 cut(s) 23, 140, 470, 750, 1084, 1229, 1420, 1475, 1478
BspANI GGCC 2 cut(s) 5, 1097
BspCNI CTCAG 5 cut(s) 1072, 1204, 1516, 1564, 1897
BspEI TCCGGA 1 cut(s) 367
BspFNI CGCG 2 cut(s) 1480, 1667
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 3 cut(s) 522, 585, 1438
BspMI ACCTGC 1 cut(s) 1473
BspPI GGATC 3 cut(s) 760, 1057, 1085
BspT107I GGYRCC 3 cut(s) 520, 583, 1436
BsrBI CCGCTC 1 cut(s) 1084
BsrDI GCAATG 2 cut(s) 1115, 1726
BsrFI RCCGGY 3 cut(s) 159, 1166, 1610
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 5 cut(s) 1098, 1555, 1733, 1831, 1842
BssAI RCCGGY 3 cut(s) 159, 1166, 1610
BssECI CCNNGG 2 cut(s) 618, 1344
BssMI GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
BssNI GRCGYC 2 cut(s) 521, 584
BssT1I CCWWGG 2 cut(s) 618, 1344
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 4 cut(s) 1074, 1642, 1746, 1751
Bst6I CTCTTC 1 cut(s) 407
BstACI GRCGYC 2 cut(s) 521, 584
BstAPI GCANNNNNTGC 2 cut(s) 283, 1627
BstAUI TGTACA 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 2 cut(s) 483, 487
BstDEI CTNAG 6 cut(s) 955, 1059, 1212, 1503, 1572, 1905
BstDSI CCRYGG 1 cut(s) 618
BstF5I GGATG 8 cut(s) 364, 533, 679, 1029, 1408, 1471, 1649, 1801
BstFNI CGCG 2 cut(s) 1480, 1667
BstH2I RGCGCY 2 cut(s) 524, 587
BstHHI GCGC 5 cut(s) 523, 586, 692, 1351, 1482
BstKTI GATC 5 cut(s) 755, 1065, 1093, 1147, 1671
BstMAI GTCTC 2 cut(s) 1452, 1901
BstMBI GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
BstMCI CGRYCG 1 cut(s) 1671
BstMWI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1627, 1856
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 1 cut(s) 485
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 1439
BstUI CGCG 2 cut(s) 1480, 1667
BstV1I GCAGC 2 cut(s) 501, 873
BstV2I GAAGAC 6 cut(s) 512, 827, 1277, 1366, 1812, 1875
BstX2I RGATCY 2 cut(s) 752, 1062
BstYI RGATCY 2 cut(s) 752, 1062
BsuRI GGCC 2 cut(s) 5, 1097
BtgI CCRYGG 1 cut(s) 618
BtsCI GGATG 8 cut(s) 364, 533, 679, 1029, 1408, 1471, 1649, 1801
BtsI GCAGTG 2 cut(s) 284, 1323
BtsIMutI CAGTG 5 cut(s) 284, 759, 1105, 1323, 1740
BtuMI TCGCGA 1 cut(s) 1667
BveI ACCTGC 1 cut(s) 1473
Cac8I GCNNGC 2 cut(s) 483, 487
CciI TCATGA 1 cut(s) 127
CfoI GCGC 5 cut(s) 523, 586, 692, 1351, 1482
Cfr10I RCCGGY 3 cut(s) 159, 1166, 1610
Cfr13I GGNCC 2 cut(s) 631, 1829
Csp6I GTAC 4 cut(s) 577, 1030, 1332, 1747
CspAI ACCGGT 1 cut(s) 1166
CviQI GTAC 4 cut(s) 577, 1030, 1332, 1747
DdeI CTNAG 6 cut(s) 955, 1059, 1212, 1503, 1572, 1905
DinI GGCGCC 2 cut(s) 522, 585
DpnI GATC 5 cut(s) 754, 1064, 1092, 1146, 1670
DpnII GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
DraI TTTAAA 1 cut(s) 375
DraIII CACNNNGTG 1 cut(s) 1267
EaeI YGGCCR 2 cut(s) 3, 1095
Eam1104I CTCTTC 1 cut(s) 407
EarI CTCTTC 1 cut(s) 407
EciI GGCGGA 3 cut(s) 485, 765, 1464
Ecl136II GAGCTC 1 cut(s) 832
Eco130I CCWWGG 2 cut(s) 618, 1344
Eco24I GRGCYC 1 cut(s) 834
Eco47I GGWCC 2 cut(s) 631, 1829
Eco53kI GAGCTC 1 cut(s) 832
Eco57I CTGAAG 3 cut(s) 704, 932, 1585
Eco88I CYCGRG 1 cut(s) 926
EcoICRI GAGCTC 1 cut(s) 832
EcoRII CCWGG 1 cut(s) 633
EcoT14I CCWWGG 2 cut(s) 618, 1344
EcoT22I ATGCAT 2 cut(s) 937, 1632
EcoT38I GRGCYC 1 cut(s) 834
EgeI GGCGCC 2 cut(s) 522, 585
EheI GGCGCC 2 cut(s) 522, 585
ErhI CCWWGG 2 cut(s) 618, 1344
FaqI GGGAC 2 cut(s) 96, 102
FauNDI CATATG 1 cut(s) 1018
Fnu4HI GCNGC 5 cut(s) 23, 490, 862, 1421, 1478
FokI GGATG 8 cut(s) 351, 520, 686, 1036, 1415, 1458, 1636, 1808
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 5 cut(s) 23, 490, 862, 1421, 1478
FspBI CTAG 5 cut(s) 852, 1142, 1275, 1490, 1758
GlaI GCGC 5 cut(s) 522, 585, 691, 1350, 1481
GluI GCNGC 5 cut(s) 23, 490, 862, 1421, 1478
GsuI CTGGAG 1 cut(s) 326
HaeII RGCGCY 2 cut(s) 524, 587
HaeIII GGCC 2 cut(s) 5, 1097
HapII CCGG 6 cut(s) 6, 160, 368, 1094, 1167, 1611
HhaI GCGC 5 cut(s) 523, 586, 692, 1351, 1482
Hin1I GRCGYC 2 cut(s) 521, 584
Hin6I GCGC 5 cut(s) 521, 584, 690, 1349, 1480
HinP1I GCGC 5 cut(s) 521, 584, 690, 1349, 1480
HindIII AAGCTT 1 cut(s) 952
HpaII CCGG 6 cut(s) 6, 160, 368, 1094, 1167, 1611
Hpy166II GTNNAC 1 cut(s) 1788
Hpy8I GTNNAC 1 cut(s) 1788
Hpy99I CGWCG 1 cut(s) 1597
HpyCH4III ACNGT 4 cut(s) 1074, 1642, 1746, 1751
HpyCH4IV ACGT 2 cut(s) 15, 299
HpyCH4V TGCA 8 cut(s) 286, 935, 1040, 1207, 1546, 1630, 1719, 1763
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1627, 1856
HpyF3I CTNAG 6 cut(s) 955, 1059, 1212, 1503, 1572, 1905
HpySE526I ACGT 2 cut(s) 15, 299
Hsp92I GRCGYC 2 cut(s) 521, 584
HspAI GCGC 5 cut(s) 521, 584, 690, 1349, 1480
KasI GGCGCC 2 cut(s) 520, 583
Kpn2I TCCGGA 1 cut(s) 367
Kzo9I GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
LmnI GCTCC 2 cut(s) 478, 829
Lsp1109I GCAGC 2 cut(s) 501, 873
LweI GCATC 1 cut(s) 322
MaeI CTAG 5 cut(s) 852, 1142, 1275, 1490, 1758
MaeII ACGT 2 cut(s) 15, 299
MaeIII GTNAC 5 cut(s) 135, 155, 919, 1406, 1485
MalI GATC 5 cut(s) 754, 1064, 1092, 1146, 1670
MbiI CCGCTC 1 cut(s) 1084
MboI GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
MflI RGATCY 2 cut(s) 752, 1062
MhlI GDGCHC 2 cut(s) 834, 1439
MluCI AATT 6 cut(s) 540, 597, 855, 1507, 1605, 1685
Mly113I GGCGCC 2 cut(s) 521, 584
MlyI GAGTC 4 cut(s) 355, 1121, 1671, 1903
Mph1103I ATGCAT 2 cut(s) 937, 1632
MroI TCCGGA 1 cut(s) 367
MseI TTAA 3 cut(s) 374, 1416, 1454
MslI CAYNNNNRTG 2 cut(s) 222, 300
MspI CCGG 6 cut(s) 6, 160, 368, 1094, 1167, 1611
MspR9I CCNGG 1 cut(s) 635
MvaI CCWGG 1 cut(s) 635
MvnI CGCG 2 cut(s) 1480, 1667
MwoI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1627, 1856
NarI GGCGCC 2 cut(s) 521, 584
NcoI CCATGG 1 cut(s) 618
NdeI CATATG 1 cut(s) 1018
NdeII GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
NlaIV GGNNCC 3 cut(s) 522, 585, 1438
NmuCI GTSAC 4 cut(s) 135, 155, 919, 1406
NruI TCGCGA 1 cut(s) 1667
NsiI ATGCAT 2 cut(s) 937, 1632
NspI RCATGY 1 cut(s) 485
PaeI GCATGC 1 cut(s) 485
PagI TCATGA 1 cut(s) 127
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PfeI GAWTC 6 cut(s) 641, 677, 1103, 1285, 1391, 1565
PinAI ACCGGT 1 cut(s) 1166
PkrI GCNGC 5 cut(s) 24, 491, 863, 1422, 1479
Ple19I CGATCG 1 cut(s) 1671
PleI GAGTC 4 cut(s) 354, 1120, 1670, 1903
PluTI GGCGCC 2 cut(s) 524, 587
PpsI GAGTC 4 cut(s) 354, 1120, 1670, 1903
Ppu21I YACGTR 1 cut(s) 300
Psp124BI GAGCTC 1 cut(s) 834
Psp6I CCWGG 1 cut(s) 633
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 3 cut(s) 522, 585, 1438
PspPI GGNCC 2 cut(s) 631, 1829
PsuI RGATCY 2 cut(s) 752, 1062
PvuI CGATCG 1 cut(s) 1671
RruI TCGCGA 1 cut(s) 1667
RsaI GTAC 4 cut(s) 578, 1031, 1333, 1748
RsaNI GTAC 4 cut(s) 577, 1030, 1332, 1747
RseI CAYNNNNRTG 2 cut(s) 222, 300
SacI GAGCTC 1 cut(s) 834
SaqAI TTAA 3 cut(s) 374, 1416, 1454
SatI GCNGC 5 cut(s) 23, 490, 862, 1421, 1478
Sau3AI GATC 5 cut(s) 752, 1062, 1090, 1144, 1668
Sau96I GGNCC 2 cut(s) 631, 1829
ScaI AGTACT 2 cut(s) 1333, 1748
SchI GAGTC 4 cut(s) 355, 1121, 1671, 1903
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 2 cut(s) 834, 1439
SfaNI GCATC 1 cut(s) 322
SfcI CTRYAG 1 cut(s) 792
SfoI GGCGCC 2 cut(s) 522, 585
SgrAI CRCCGGYG 1 cut(s) 159
SinI GGWCC 2 cut(s) 631, 1829
SmiMI CAYNNNNRTG 2 cut(s) 222, 300
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
SpeI ACTAGT 1 cut(s) 1274
SphI GCATGC 1 cut(s) 485
Sse9I AATT 6 cut(s) 540, 597, 855, 1507, 1605, 1685
SsiI CCGC 9 cut(s) 23, 140, 470, 750, 1084, 1229, 1420, 1475, 1478
SspDI GGCGCC 2 cut(s) 520, 583
SspMI CTAG 5 cut(s) 852, 1142, 1275, 1490, 1758
SstI GAGCTC 1 cut(s) 834
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 2 cut(s) 618, 1344
TaaI ACNGT 4 cut(s) 1074, 1642, 1746, 1751
TaiI ACGT 2 cut(s) 18, 302
TaqI TCGA 3 cut(s) 945, 1660, 1671
TaqII GACCGA 1 cut(s) 1172
TasI AATT 6 cut(s) 540, 597, 855, 1507, 1605, 1685
TatI WGTACW 4 cut(s) 576, 1029, 1331, 1746
TauI GCSGC 3 cut(s) 25, 1423, 1480
TfiI GAWTC 6 cut(s) 641, 677, 1103, 1285, 1391, 1565
Tru1I TTAA 3 cut(s) 374, 1416, 1454
Tru9I TTAA 3 cut(s) 374, 1416, 1454
TscAI CASTG 5 cut(s) 284, 766, 1105, 1323, 1740
TseFI GTSAC 4 cut(s) 135, 155, 919, 1406
TseI GCWGC 2 cut(s) 489, 861
Tsp45I GTSAC 4 cut(s) 135, 155, 919, 1406
TspGWI ACGGA 2 cut(s) 839, 1642
TspRI CASTG 5 cut(s) 284, 766, 1105, 1323, 1740
VpaK11BI GGWCC 2 cut(s) 631, 1829
XapI RAATTY 2 cut(s) 1507, 1685
XbaI TCTAGA 1 cut(s) 1141
XceI RCATGY 1 cut(s) 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 625
XspI CTAG 5 cut(s) 852, 1142, 1275, 1490, 1758
ZrmI AGTACT 2 cut(s) 1333, 1748
Zsp2I ATGCAT 2 cut(s) 937, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.