Prupe.5G196600_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Forward (+)
15927994 .. 15930894
2901 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G196600.1

Sequence Viewer

Length: 1818 bp
ATGGTGCATTGGCAAAATTCTCAGCCATCTGCCGCCGCCGCTGATCTCATCTCGGGTAAAGGCCATGTCTTGACCATGACTTCCCGCCAATATGATCCACGGGGGAAGTTACCGGAGATGGAGAAATCTCCGGTCAATATATCGGAGATGGAGAAAACCCAAAAGTTCGAATTGCAAACATCAATACTGGAGCTGCTTCGCCGACTAAGCGGCAGTAATGATATTCTCGTTCAACCCTGCAGTCCCAGCCTGACGATGCCTTCCGCGGCCGCTGATCTCACCCCTGCTGAATACCGTGCCTTGACGAAGTTATCGGAGGTGCTTTCCGCCCAGCTTTCTGCACGGCTATCCGCCCAGCTTTCTGCACGGCTATCCGCCCAGCTTTCTGCCCAGCAACTCCAACTGGCCGATACGCAGAAATCAATACTGGAGGAGCTTCGTCTAATACGCTCCAGTAATGCTAGCCTCACTCAATCCACGACGACTCCAAATTTCACGGTGATTGACGACAGTCCCAACCGTGAGCCCTTTAATCCTCACCCAAGCCCAGAGCATGCATCGATGACTACACATCAGGGGGAAGATAGATCTGTATATTTATTGGTGTCTTTTGATGATAGCGAATACACAGATTCAATATATAAAGTGACATTCAAACATGGAGGAGTCACTCATGAACCCCCAGTAGTTGGACTTATGGCGGAGTACTATGACAGTTTTCCCATCAAGGGTGCAAGAATTTTCAATCGCTCCAAATTATACATCATTCCACAGGAAGTTTATGAAAAAACTCGCAGGGCCAAATCTTGCAGGCCATTAGGATACAGCATTGACACCAAGACTGGGTCATATTGTTCATCTCTTCCTCCTAGCATAGCCTCTAAAGCACTAGGAACTCTTGTATCTGCTTATGACAAGCTTTACTATGTTGCACTTCCAGGGTCCTCACCATCAATTAAGGAGCCCTCCTTCGAGAGATATGATCCTGATGAAGACCTTTGGGAGCGAATGACTTCTTTTCCATTTTATCATGAATATGGAATCCGTATGAAAATAATTGGTTATGCCGTTTGTTATGGCGTTATTTTATTTTCATTGTCGGACTCCTACATGAATTCATTTGTCGTTGCTTTCCATGAGAGTAGAAACCAATGGAATCAAGTGACTTCTGCTTCTTATGCTTCTTTCCGAGGGAGGGCTGTGGTTGTAGGCGACACTATCTATGCCTTACATGCGCTTATAGAGGAGGTGATTATAACATTCTCATTAAGGATGGACAAAGGTGAAGACGGTGGCATTGCATATTCCCTAAGCCCACTGTTTGTATTGCGTGGCCTGAAGATTGCATGTCCGCCAGTGCGATTTAATAAGCTTAAGACAGGGTATTTGGTTCATTTGGGTAACAGAGACTTTTTTCATGTCAAGTCTGGCAGTCCCAATGAAGAAGCACTTCCCGTGGTTCAATATCTTTGTATCACAACGTTTCAAATTATTGTTGGAGAAGGAGGAAAACCTATGATCAGAACCATACATTCAACTGTTCATCCTGTGGATATCAAGGGCCGTGATTGGTTCTCACTTGAATTCTGCTTCACGCCTGAGTTTGGGGATTATGAACCCATAGAAGTGGAGAGTGTGACTAGTATGAATCTGCCAAAACAAGAAGAAACCACTTTGGATGAACATGATAAGGAGTTTTTGATCCGTGAGGGGACTCGAAGTAAGCTTCGTGCTTGCCCATGGCTAAGAGGGAAGCTAAACTTGAAGTATAAGGCGCCATGCATCGTGAAAGGGCCAAGCACAAAAACACCCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

606

Amino Acids

67.73

Weight (kDa)

6.75

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1256
AccB1I GGYRCC 1 cut(s) 1774
AccB7I CCANNNNNTGG 1 cut(s) 689
AccII CGCG 1 cut(s) 266
AclI AACGTT 1 cut(s) 1481
AclWI GGATC 3 cut(s) 89, 977, 1696
AcoI YGGCCR 2 cut(s) 267, 405
AcsI RAATTY 5 cut(s) 16, 490, 738, 1114, 1583
AcuI CTGAAG 1 cut(s) 1358
AcyI GRCGYC 1 cut(s) 1775
AfaI GTAC 1 cut(s) 707
AfiI CCNNNNNNNGG 5 cut(s) 689, 728, 843, 1195, 1604
AflII CTTAAG 1 cut(s) 1373
AgsI TTSAA 9 cut(s) 233, 636, 655, 745, 1463, 1487, 1536, 1583, 1765
AhlI ACTAGT 1 cut(s) 1640
AjnI CCWGG 1 cut(s) 937
AluBI AGCT 9 cut(s) 193, 334, 358, 382, 436, 919, 1372, 1726, 1756
AluI AGCT 9 cut(s) 193, 334, 358, 382, 436, 919, 1372, 1726, 1756
Alw26I GTCTC 1 cut(s) 1401
AlwI GGATC 3 cut(s) 89, 977, 1696
Ama87I CYCGRG 1 cut(s) 52
AoxI GGCC 8 cut(s) 61, 267, 405, 798, 812, 1333, 1561, 1793
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 5 cut(s) 16, 490, 738, 1114, 1583
ArsI GACNNNNNNTTYG 2 cut(s) 1369, 1401
Asp700I GAANNNNTTC 2 cut(s) 1012, 1449
AspLEI GCGC 2 cut(s) 1237, 1777
AspS9I GGNCC 4 cut(s) 798, 942, 1561, 1793
AsuHPI GGTGA 6 cut(s) 271, 511, 530, 939, 1261, 1295
AsuII TTCGAA 1 cut(s) 168
AsuNHI GCTAGC 1 cut(s) 461
AvaI CYCGRG 1 cut(s) 52
AvaII GGWCC 1 cut(s) 942
BaeI ACNNNNGTAYC 2 cut(s) 885, 918
BanI GGYRCC 1 cut(s) 1774
BanII GRGCYC 2 cut(s) 528, 966
BbsI GAAGAC 2 cut(s) 999, 1293
BbvI GCAGC 1 cut(s) 180
BccI CCATC 6 cut(s) 34, 112, 142, 731, 958, 1267
BceAI ACGGC 4 cut(s) 359, 383, 1052, 1548
BciT130I CCWGG 1 cut(s) 939
BciVI GTATCC 1 cut(s) 815
BclI TGATCA 1 cut(s) 1518
BcoDI GTCTC 1 cut(s) 1401
BcuI ACTAGT 1 cut(s) 1640
BfaI CTAG 4 cut(s) 462, 870, 890, 1641
BfmI CTRYAG 1 cut(s) 238
BfoI RGCGCY 1 cut(s) 1778
BfrI CTTAAG 1 cut(s) 1373
BfuI GTATCC 1 cut(s) 815
BglII AGATCT 1 cut(s) 587
BisI GCNGC 7 cut(s) 33, 36, 39, 194, 211, 267, 270
BlsI GCNGC 7 cut(s) 34, 37, 40, 195, 212, 268, 271
BmcAI AGTACT 1 cut(s) 707
Bme1390I CCNGG 1 cut(s) 939
Bme18I GGWCC 1 cut(s) 942
BmeT110I CYCGRG 1 cut(s) 52
BmgT120I GGNCC 4 cut(s) 798, 942, 1561, 1793
BmiI GGNNCC 3 cut(s) 943, 963, 1776
BmrFI CCNGG 1 cut(s) 939
BmrI ACTGGG 2 cut(s) 677, 852
BmsI GCATC 3 cut(s) 246, 566, 1791
BmtI GCTAGC 1 cut(s) 465
BmuI ACTGGG 2 cut(s) 677, 852
BoxI GACNNNNGTC 1 cut(s) 510
BpiI GAAGAC 2 cut(s) 999, 1293
BpmI CTGGAG 3 cut(s) 209, 436, 449
Bpu10I CCTNAGC 1 cut(s) 1310
Bpu14I TTCGAA 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 560
BsaHI GRCGYC 1 cut(s) 1775
BsaJI CCNNGG 6 cut(s) 98, 264, 938, 1189, 1455, 1739
BsaWI WCCGGW 2 cut(s) 112, 130
BsaXI ACNNNNNCTCC 2 cut(s) 469, 499
Bsc4I CCNNNNNNNGG 5 cut(s) 689, 728, 843, 1195, 1604
Bse1I ACTGG 7 cut(s) 192, 408, 432, 453, 683, 847, 1355
Bse3DI GCAATG 1 cut(s) 1296
BseBI CCWGG 1 cut(s) 939
BseCI ATCGAT 1 cut(s) 560
BseDI CCNNGG 6 cut(s) 98, 264, 938, 1189, 1455, 1739
BseGI GGATG 3 cut(s) 1278, 1543, 1684
BseLI CCNNNNNNNGG 5 cut(s) 689, 728, 843, 1195, 1604
BseMI GCAATG 1 cut(s) 1296
BseMII CTCAG 2 cut(s) 35, 1590
BseNI ACTGG 7 cut(s) 192, 408, 432, 453, 683, 847, 1355
BseRI GAGGAG 3 cut(s) 446, 678, 1259
BseX3I CGGCCG 1 cut(s) 267
BseXI GCAGC 1 cut(s) 180
BseYI CCCAGC 5 cut(s) 245, 330, 354, 378, 390
BsgI GTGCAG 2 cut(s) 324, 348
Bsh1236I CGCG 1 cut(s) 266
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 8 cut(s) 63, 269, 407, 800, 814, 1335, 1563, 1795
BshNI GGYRCC 1 cut(s) 1774
BshVI ATCGAT 1 cut(s) 560
BsiEI CGRYCG 1 cut(s) 270
BsiHKCI CYCGRG 1 cut(s) 52
BsiSI CCGG 2 cut(s) 113, 131
BslFI GGGAC 4 cut(s) 228, 498, 1419, 1726
BslI CCNNNNNNNGG 5 cut(s) 689, 728, 843, 1195, 1604
BsmAI GTCTC 1 cut(s) 1401
BsmFI GGGAC 4 cut(s) 228, 498, 1419, 1726
BsnI GGCC 8 cut(s) 63, 269, 407, 800, 814, 1335, 1563, 1795
BsoBI CYCGRG 1 cut(s) 52
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 2 cut(s) 528, 966
Bsp143I GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
Bsp19I CCATGG 1 cut(s) 1739
BspANI GGCC 8 cut(s) 63, 269, 407, 800, 814, 1335, 1563, 1795
BspCNI CTCAG 2 cut(s) 34, 1591
BspDI ATCGAT 1 cut(s) 560
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 2 cut(s) 673, 1030
BspLI GGNNCC 3 cut(s) 943, 963, 1776
BspMAI CTGCAG 1 cut(s) 242
BspOI GCTAGC 1 cut(s) 465
BspPI GGATC 3 cut(s) 89, 977, 1696
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 1774
BspTI CTTAAG 1 cut(s) 1373
BsrDI GCAATG 1 cut(s) 1296
BsrI ACTGG 7 cut(s) 192, 408, 432, 453, 683, 847, 1355
BssECI CCNNGG 6 cut(s) 98, 264, 938, 1189, 1455, 1739
BssMI GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
BssNI GRCGYC 1 cut(s) 1775
BssT1I CCWWGG 1 cut(s) 1739
Bst2UI CCWGG 1 cut(s) 939
Bst4CI ACNGT 8 cut(s) 296, 499, 512, 521, 716, 1292, 1320, 1540
Bst6I CTCTTC 1 cut(s) 867
BstACI GRCGYC 1 cut(s) 1775
BstAFI CTTAAG 1 cut(s) 1373
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 4 cut(s) 463, 555, 812, 1735
BstDEI CTNAG 5 cut(s) 21, 206, 1310, 1599, 1745
BstDSI CCRYGG 4 cut(s) 98, 264, 1455, 1739
BstF5I GGATG 3 cut(s) 1278, 1543, 1684
BstFNI CGCG 1 cut(s) 266
BstH2I RGCGCY 1 cut(s) 1778
BstHHI GCGC 2 cut(s) 1237, 1777
BstKTI GATC 7 cut(s) 46, 97, 277, 590, 985, 1521, 1704
BstMAI GTCTC 1 cut(s) 1401
BstMBI GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 6 cut(s) 38, 207, 246, 884, 1178, 1232
BstNI CCWGG 1 cut(s) 939
BstNSI RCATGY 3 cut(s) 557, 1235, 1350
BstPAI GACNNNNGTC 1 cut(s) 510
BstSCI CCNGG 1 cut(s) 937
BstSFI CTRYAG 1 cut(s) 238
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 180
BstV2I GAAGAC 2 cut(s) 999, 1293
BstX2I RGATCY 1 cut(s) 587
BstXI CCANNNNNNTGG 1 cut(s) 1627
BstYI RGATCY 1 cut(s) 587
BstZI CGGCCG 1 cut(s) 267
Bsu15I ATCGAT 1 cut(s) 560
BsuI GTATCC 1 cut(s) 815
BsuRI GGCC 8 cut(s) 63, 269, 407, 800, 814, 1335, 1563, 1795
BsuTUI ATCGAT 1 cut(s) 560
BtgI CCRYGG 4 cut(s) 98, 264, 1455, 1739
BtsCI GGATG 3 cut(s) 1278, 1543, 1684
BtsIMutI CAGTG 2 cut(s) 1316, 1362
Cac8I GCNNGC 4 cut(s) 463, 555, 812, 1735
CciI TCATGA 2 cut(s) 673, 1030
CciNI GCGGCCGC 1 cut(s) 267
CfoI GCGC 2 cut(s) 1237, 1777
Cfr13I GGNCC 4 cut(s) 798, 942, 1561, 1793
Cfr42I CCGCGG 1 cut(s) 267
ClaI ATCGAT 1 cut(s) 560
Csp6I GTAC 1 cut(s) 706
CviQI GTAC 1 cut(s) 706
DdeI CTNAG 5 cut(s) 21, 206, 1310, 1599, 1745
DinI GGCGCC 1 cut(s) 1776
DpnI GATC 7 cut(s) 45, 96, 276, 589, 984, 1520, 1703
DpnII GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
EaeI YGGCCR 2 cut(s) 267, 405
EagI CGGCCG 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
EciI GGCGGA 5 cut(s) 316, 340, 364, 716, 1341
EclXI CGGCCG 1 cut(s) 267
Eco130I CCWWGG 1 cut(s) 1739
Eco24I GRGCYC 2 cut(s) 528, 966
Eco32I GATATC 1 cut(s) 1555
Eco47I GGWCC 1 cut(s) 942
Eco52I CGGCCG 1 cut(s) 267
Eco57I CTGAAG 1 cut(s) 1358
Eco88I CYCGRG 1 cut(s) 52
EcoO109I RGGNCCY 1 cut(s) 942
EcoRI GAATTC 2 cut(s) 1114, 1583
EcoRII CCWGG 1 cut(s) 937
EcoRV GATATC 1 cut(s) 1555
EcoT14I CCWWGG 1 cut(s) 1739
EcoT22I ATGCAT 2 cut(s) 559, 1784
EcoT38I GRGCYC 2 cut(s) 528, 966
EgeI GGCGCC 1 cut(s) 1776
EheI GGCGCC 1 cut(s) 1776
ErhI CCWWGG 1 cut(s) 1739
FalI AAGNNNNNCTT 4 cut(s) 1434, 1466, 1745, 1777
FaqI GGGAC 4 cut(s) 228, 498, 1419, 1726
FauI CCCGC 1 cut(s) 92
FbaI TGATCA 1 cut(s) 1518
Fnu4HI GCNGC 7 cut(s) 33, 36, 39, 194, 211, 267, 270
FokI GGATG 3 cut(s) 1285, 1530, 1691
FriOI GRGCYC 2 cut(s) 528, 966
Fsp4HI GCNGC 7 cut(s) 33, 36, 39, 194, 211, 267, 270
FspBI CTAG 4 cut(s) 462, 870, 890, 1641
GlaI GCGC 2 cut(s) 1236, 1776
GluI GCNGC 7 cut(s) 33, 36, 39, 194, 211, 267, 270
GsaI CCCAGC 5 cut(s) 249, 334, 358, 382, 394
GsuI CTGGAG 3 cut(s) 209, 436, 449
HaeII RGCGCY 1 cut(s) 1778
HaeIII GGCC 8 cut(s) 63, 269, 407, 800, 814, 1335, 1563, 1795
HapII CCGG 2 cut(s) 113, 131
HhaI GCGC 2 cut(s) 1237, 1777
Hin1I GRCGYC 1 cut(s) 1775
Hin6I GCGC 2 cut(s) 1235, 1775
HinP1I GCGC 2 cut(s) 1235, 1775
HindIII AAGCTT 3 cut(s) 917, 1370, 1724
HinfI GANTC 8 cut(s) 484, 632, 666, 1041, 1103, 1156, 1648, 1714
HpaII CCGG 2 cut(s) 113, 131
HphI GGTGA 6 cut(s) 271, 511, 530, 939, 1261, 1295
Hpy188I TCNGA 5 cut(s) 145, 316, 1102, 1190, 1523
Hpy188III TCNNGA 6 cut(s) 70, 674, 973, 986, 1031, 1786
Hpy99I CGWCG 1 cut(s) 484
HpyAV CCTTC 3 cut(s) 270, 979, 1496
HpyCH4III ACNGT 8 cut(s) 296, 499, 512, 521, 716, 1292, 1320, 1540
HpyCH4IV ACGT 1 cut(s) 1481
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 207, 246, 884, 1178, 1232
HpyF3I CTNAG 5 cut(s) 21, 206, 1310, 1599, 1745
HpySE526I ACGT 1 cut(s) 1481
Hsp92I GRCGYC 1 cut(s) 1775
HspAI GCGC 2 cut(s) 1235, 1775
KasI GGCGCC 1 cut(s) 1774
Ksp22I TGATCA 1 cut(s) 1518
KspI CCGCGG 1 cut(s) 267
Kzo9I GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
LmnI GCTCC 6 cut(s) 190, 433, 455, 755, 961, 1003
Lsp1109I GCAGC 1 cut(s) 180
LweI GCATC 3 cut(s) 246, 566, 1791
MaeI CTAG 4 cut(s) 462, 870, 890, 1641
MaeII ACGT 1 cut(s) 1481
MaeIII GTNAC 6 cut(s) 108, 646, 667, 1162, 1400, 1636
MalI GATC 7 cut(s) 45, 96, 276, 589, 984, 1520, 1703
MboI GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
MboII GAAGA 7 cut(s) 593, 854, 1004, 1298, 1351, 1454, 1676
MflI RGATCY 1 cut(s) 587
MhlI GDGCHC 2 cut(s) 528, 966
Mly113I GGCGCC 1 cut(s) 1775
MlyI GAGTC 4 cut(s) 478, 675, 1097, 1708
MmeI TCCRAC 4 cut(s) 424, 670, 1080, 1477
Mph1103I ATGCAT 2 cut(s) 559, 1784
MroXI GAANNNNTTC 2 cut(s) 1012, 1449
MseI TTAA 5 cut(s) 531, 957, 1268, 1365, 1374
MslI CAYNNNNRTG 2 cut(s) 1035, 1625
MspA1I CMGCKG 3 cut(s) 41, 266, 272
MspCI CTTAAG 1 cut(s) 1373
MspI CCGG 2 cut(s) 113, 131
MspR9I CCNGG 1 cut(s) 939
MvaI CCWGG 1 cut(s) 939
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 6 cut(s) 38, 207, 246, 884, 1178, 1232
NarI GGCGCC 1 cut(s) 1775
NcoI CCATGG 1 cut(s) 1739
NdeII GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
NheI GCTAGC 1 cut(s) 461
NlaIV GGNNCC 3 cut(s) 943, 963, 1776
NmuCI GTSAC 4 cut(s) 646, 667, 1162, 1636
NotI GCGGCCGC 1 cut(s) 267
NsiI ATGCAT 2 cut(s) 559, 1784
NspI RCATGY 3 cut(s) 557, 1235, 1350
NspV TTCGAA 1 cut(s) 168
PaeI GCATGC 1 cut(s) 557
PagI TCATGA 2 cut(s) 673, 1030
PdmI GAANNNNTTC 2 cut(s) 1012, 1449
PfeI GAWTC 4 cut(s) 632, 1041, 1156, 1648
PflFI GACNNNGTC 1 cut(s) 844
PflMI CCANNNNNTGG 1 cut(s) 689
PkrI GCNGC 7 cut(s) 34, 37, 40, 195, 212, 268, 271
PleI GAGTC 4 cut(s) 478, 674, 1097, 1708
PluTI GGCGCC 1 cut(s) 1778
PpsI GAGTC 4 cut(s) 478, 674, 1097, 1708
PpuMI RGGWCCY 1 cut(s) 942
PshAI GACNNNNGTC 1 cut(s) 510
PsiI TTATAA 1 cut(s) 1256
Psp1406I AACGTT 1 cut(s) 1481
Psp5II RGGWCCY 1 cut(s) 942
Psp6I CCWGG 1 cut(s) 937
PspFI CCCAGC 5 cut(s) 245, 330, 354, 378, 390
PspGI CCWGG 1 cut(s) 937
PspN4I GGNNCC 3 cut(s) 943, 963, 1776
PspPI GGNCC 4 cut(s) 798, 942, 1561, 1793
PspPPI RGGWCCY 1 cut(s) 942
PstI CTGCAG 1 cut(s) 242
PsuI RGATCY 1 cut(s) 587
PsyI GACNNNGTC 1 cut(s) 844
RsaI GTAC 1 cut(s) 707
RsaNI GTAC 1 cut(s) 706
RseI CAYNNNNRTG 2 cut(s) 1035, 1625
SacII CCGCGG 1 cut(s) 267
SaqAI TTAA 5 cut(s) 531, 957, 1268, 1365, 1374
SatI GCNGC 7 cut(s) 33, 36, 39, 194, 211, 267, 270
Sau3AI GATC 7 cut(s) 43, 94, 274, 587, 982, 1518, 1701
Sau96I GGNCC 4 cut(s) 798, 942, 1561, 1793
ScaI AGTACT 1 cut(s) 707
SchI GAGTC 4 cut(s) 478, 675, 1097, 1708
ScrFI CCNGG 1 cut(s) 939
SduI GDGCHC 2 cut(s) 528, 966
SfaNI GCATC 3 cut(s) 246, 566, 1791
SfcI CTRYAG 1 cut(s) 238
SfoI GGCGCC 1 cut(s) 1776
Sfr303I CCGCGG 1 cut(s) 267
SfuI TTCGAA 1 cut(s) 168
SgrBI CCGCGG 1 cut(s) 267
SinI GGWCC 1 cut(s) 942
SmiMI CAYNNNNRTG 2 cut(s) 1035, 1625
SmlI CTYRAG 1 cut(s) 1373
SmoI CTYRAG 1 cut(s) 1373
SpeI ACTAGT 1 cut(s) 1640
SphI GCATGC 1 cut(s) 557
SspDI GGCGCC 1 cut(s) 1774
SspMI CTAG 4 cut(s) 462, 870, 890, 1641
StyD4I CCNGG 1 cut(s) 937
StyI CCWWGG 1 cut(s) 1739
TaaI ACNGT 8 cut(s) 296, 499, 512, 521, 716, 1292, 1320, 1540
TaiI ACGT 1 cut(s) 1484
TaqI TCGA 4 cut(s) 168, 560, 972, 1717
TatI WGTACW 1 cut(s) 705
TauI GCSGC 6 cut(s) 35, 38, 41, 213, 269, 272
TfiI GAWTC 4 cut(s) 632, 1041, 1156, 1648
Tru1I TTAA 5 cut(s) 531, 957, 1268, 1365, 1374
Tru9I TTAA 5 cut(s) 531, 957, 1268, 1365, 1374
TscAI CASTG 2 cut(s) 1323, 1362
TseFI GTSAC 4 cut(s) 646, 667, 1162, 1636
TseI GCWGC 1 cut(s) 193
Tsp45I GTSAC 4 cut(s) 646, 667, 1162, 1636
TspGWI ACGGA 2 cut(s) 1034, 1694
TspRI CASTG 2 cut(s) 1323, 1362
Tth111I GACNNNGTC 1 cut(s) 844
Van91I CCANNNNNTGG 1 cut(s) 689
Vha464I CTTAAG 1 cut(s) 1373
VpaK11BI GGWCC 1 cut(s) 942
XapI RAATTY 5 cut(s) 16, 490, 738, 1114, 1583
XceI RCATGY 3 cut(s) 557, 1235, 1350
XmnI GAANNNNTTC 2 cut(s) 1012, 1449
XspI CTAG 4 cut(s) 462, 870, 890, 1641
ZrmI AGTACT 1 cut(s) 707
Zsp2I ATGCAT 2 cut(s) 559, 1784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.