Rh1AG433600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000150
Physical Location & Seq
Reverse (-)
65948359 .. 65949600
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG433600.1

Sequence Viewer

Length: 1242 bp
ATGGTTCACTTAGGCTTTCATGCCCAATACCATGGTGCAGTTTATGAAATAGAATTCGAGAAAATTGAGAAACTAGAGAAACAAGAGTATGAAGATTCTGTAGGCGGCGTTGGTGTTGATCCATCTACTCTGCCACTAATCGACCCGGTATTGGAGTTCTTTGATGGGAGGTGGGGGATCCCGGAGATCTGTATATTCCATGGTGCGAGGTTTGGCTCCAAGGTATACACCATGTTAAATGAAATCAAGTGGCCTTATCGCTCGCCCTTCAGACCCACCGATGCATTTTTCTATGACACAAGTAACTTAGACTCTGATGTTCAGCAGATCTCTCCGCCTAAAACACCCAAGACATGGTCTGCAGTTATATCTGCATATGGAATGCTTTATTATCTTGCACAACCAACATGCTTCCCATATATTAATGAACATTCGTTTGAGCGATATGATCCCACCAGCGATTCTTGGGAGTCGTTGCCTTCGTATCCAGGTTATTCTCTAGACCAGTTCCAAACGATGATATCTGGTCATGCTGTTTGTTATGGTTATATATTAATTTCAATGATTGGTGAAGAGGAATGTCTAATGGTGGCTTTTCATATTGGTACAAAAACATGGCATAAGGTCAAGCTTAGTAAATCGGTGGAAGATTTGCATGATGGTTTCTGGGGTAGGGCTGTGGTTGTAGATAATGTTATCTATGCCCTATCATCTAGTTTCGGTGAGATTTTAGCACTCTCTTTTTGGTGGGATTCGAAGGATAACAGTGAGATTATATCTCGTCGTCATTATATTGGTGCCCGGGTCTCTTTGTATGTAAAAGCTCAGGCGTATCCGCCATCCAGATTACATGGAGTGAGGACTCAGAAATTGGTTCATATGGGAAGGCGGGACTTTTGCCTTGTGCAGACGGGTCTGAACAGGGATTCTCTCGAGCATCAATATCTTGTTGTCACCACCTTTCGAATTGTCGGTGAAGGACAAAAAATGTATATCAAGACCCAACGTTCATCAGTTTTTCGAGTTGCCATCCACGGCCATGGAAGTTTTGATATTGTTTTCAGCTTCGCGCCAGATTGTAAGGACATTGAACCGGAAGAAGGAGAGTATAATAAAACTACTGCACTGACCCAAAGTGAAAGTCTTGCGTGGACTTCGAAGGTGAAAGAGGATTTTTTTTCGTTTCCCACTGGCCCCAAACTAGGATTGAAGGGATGGAACTACTGCACTGACTCAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

413

Amino Acids

47.2

Weight (kDa)

5.84

Isoelectric Point (pI)

45.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 94 - 337 4.9e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 797
AccB7I CCANNNNNTGG 1 cut(s) 354
AccI GTMKAC 1 cut(s) 225
AccII CGCG 1 cut(s) 1070
AciI CCGC 4 cut(s) 105, 335, 836, 889
AclI AACGTT 1 cut(s) 1006
AclWI GGATC 4 cut(s) 113, 172, 185, 443
AcoI YGGCCR 1 cut(s) 1036
AcsI RAATTY 1 cut(s) 53
AcuI CTGAAG 1 cut(s) 253
AfaI GTAC 1 cut(s) 607
AfiI CCNNNNNNNGG 4 cut(s) 151, 354, 1100, 1202
AgsI TTSAA 3 cut(s) 561, 1091, 1210
AjnI CCWGG 1 cut(s) 487
AluBI AGCT 3 cut(s) 631, 824, 1065
AluI AGCT 3 cut(s) 631, 824, 1065
Alw26I GTCTC 1 cut(s) 811
AlwI GGATC 4 cut(s) 113, 172, 185, 443
Ama87I CYCGRG 2 cut(s) 801, 932
AoxI GGCC 3 cut(s) 251, 1036, 1192
ApoI RAATTY 1 cut(s) 53
ArsI GACNNNNNNTTYG 2 cut(s) 1126, 1158
AseI ATTAAT 2 cut(s) 423, 554
AspLEI GCGC 1 cut(s) 1072
AspS9I GGNCC 1 cut(s) 1193
AsuC2I CCSGG 4 cut(s) 146, 182, 802, 803
AsuHPI GGTGA 5 cut(s) 581, 734, 946, 986, 1174
AsuII TTCGAA 3 cut(s) 755, 964, 1157
AvaI CYCGRG 2 cut(s) 801, 932
BaeGI GKGCMC 1 cut(s) 802
BamHI GGATCC 1 cut(s) 177
BanI GGYRCC 1 cut(s) 797
BccI CCATC 6 cut(s) 130, 158, 653, 847, 1037, 1209
BceAI ACGGC 1 cut(s) 1051
BciT130I CCWGG 1 cut(s) 489
BciVI GTATCC 2 cut(s) 495, 843
BcnI CCSGG 4 cut(s) 146, 182, 802, 803
BcoDI GTCTC 1 cut(s) 811
BfaI CTAG 4 cut(s) 74, 500, 714, 1202
BfmI CTRYAG 2 cut(s) 99, 360
BfuI GTATCC 2 cut(s) 495, 843
BglII AGATCT 2 cut(s) 186, 327
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bme1390I CCNGG 5 cut(s) 146, 182, 489, 802, 803
BmeT110I CYCGRG 2 cut(s) 801, 932
BmgT120I GGNCC 1 cut(s) 1193
BmiI GGNNCC 4 cut(s) 179, 217, 799, 1195
BmrFI CCNGG 5 cut(s) 146, 182, 489, 802, 803
BmsI GCATC 2 cut(s) 271, 946
Bpu10I CCTNAGC 1 cut(s) 825
Bpu14I TTCGAA 3 cut(s) 755, 964, 1157
BpuMI CCSGG 4 cut(s) 146, 182, 802, 803
BsaI GGTCTC 1 cut(s) 811
BsaJI CCNNGG 6 cut(s) 31, 199, 219, 801, 1033, 1039
BsaWI WCCGGW 1 cut(s) 1093
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 354, 1100, 1202
Bse1I ACTGG 2 cut(s) 505, 1195
BseBI CCWGG 1 cut(s) 489
BseDI CCNNGG 6 cut(s) 31, 199, 219, 801, 1033, 1039
BseGI GGATG 3 cut(s) 839, 1029, 1220
BseLI CCNNNNNNNGG 4 cut(s) 151, 354, 1100, 1202
BseMII CTCAG 2 cut(s) 839, 878
BseNI ACTGG 2 cut(s) 505, 1195
BseSI GKGCMC 1 cut(s) 802
BsgI GTGCAG 4 cut(s) 57, 926, 1107, 1210
Bsh1236I CGCG 1 cut(s) 1070
BshFI GGCC 3 cut(s) 253, 1038, 1194
BshNI GGYRCC 1 cut(s) 797
BsiHKCI CYCGRG 2 cut(s) 801, 932
BsiSI CCGG 4 cut(s) 146, 182, 802, 1094
BslFI GGGAC 1 cut(s) 905
BslI CCNNNNNNNGG 4 cut(s) 151, 354, 1100, 1202
BsmAI GTCTC 1 cut(s) 811
BsmFI GGGAC 1 cut(s) 905
BsmI GAATGC 1 cut(s) 387
BsnI GGCC 3 cut(s) 253, 1038, 1194
Bso31I GGTCTC 1 cut(s) 811
BsoBI CYCGRG 2 cut(s) 801, 932
Bsp119I TTCGAA 3 cut(s) 755, 964, 1157
Bsp1286I GDGCHC 1 cut(s) 802
Bsp143I GATC 5 cut(s) 118, 177, 186, 327, 448
Bsp19I CCATGG 3 cut(s) 31, 199, 1039
BspACI CCGC 4 cut(s) 105, 335, 836, 889
BspANI GGCC 3 cut(s) 253, 1038, 1194
BspCNI CTCAG 2 cut(s) 838, 877
BspFNI CGCG 1 cut(s) 1070
BspLI GGNNCC 4 cut(s) 179, 217, 799, 1195
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 4 cut(s) 113, 172, 185, 443
BspT104I TTCGAA 3 cut(s) 755, 964, 1157
BspT107I GGYRCC 1 cut(s) 797
BspTNI GGTCTC 1 cut(s) 811
BsrI ACTGG 2 cut(s) 505, 1195
BssECI CCNNGG 6 cut(s) 31, 199, 219, 801, 1033, 1039
BssMI GATC 5 cut(s) 118, 177, 186, 327, 448
BssNAI GTATAC 1 cut(s) 226
BssT1I CCWWGG 4 cut(s) 31, 199, 219, 1039
Bst1107I GTATAC 1 cut(s) 226
Bst2UI CCWGG 1 cut(s) 489
Bst4CI ACNGT 1 cut(s) 767
Bst6I CTCTTC 1 cut(s) 567
BstBI TTCGAA 3 cut(s) 755, 964, 1157
BstC8I GCNNGC 1 cut(s) 263
BstDEI CTNAG 5 cut(s) 10, 307, 632, 825, 864
BstDSI CCRYGG 4 cut(s) 31, 199, 1033, 1039
BstF5I GGATG 3 cut(s) 839, 1029, 1220
BstFNI CGCG 1 cut(s) 1070
BstHHI GCGC 1 cut(s) 1072
BstKTI GATC 5 cut(s) 121, 180, 189, 330, 451
BstMAI GTCTC 1 cut(s) 811
BstMBI GATC 5 cut(s) 118, 177, 186, 327, 448
BstNI CCWGG 1 cut(s) 489
BstNSI RCATGY 1 cut(s) 411
BstSCI CCNGG 5 cut(s) 144, 180, 487, 800, 801
BstSFI CTRYAG 2 cut(s) 99, 360
BstSLI GKGCMC 1 cut(s) 802
BstUI CGCG 1 cut(s) 1070
BstX2I RGATCY 3 cut(s) 177, 186, 327
BstXI CCANNNNNNTGG 2 cut(s) 32, 1040
BstYI RGATCY 3 cut(s) 177, 186, 327
BstZ17I GTATAC 1 cut(s) 226
BsuI GTATCC 2 cut(s) 495, 843
BsuRI GGCC 3 cut(s) 253, 1038, 1194
BtgI CCRYGG 4 cut(s) 31, 199, 1033, 1039
BtsCI GGATG 3 cut(s) 839, 1029, 1220
BtsIMutI CAGTG 4 cut(s) 772, 1124, 1188, 1227
Cac8I GCNNGC 1 cut(s) 263
CfoI GCGC 1 cut(s) 1072
Cfr13I GGNCC 1 cut(s) 1193
Cfr9I CCCGGG 1 cut(s) 801
Csp6I GTAC 1 cut(s) 606
CviQI GTAC 1 cut(s) 606
DdeI CTNAG 5 cut(s) 10, 307, 632, 825, 864
DpnI GATC 5 cut(s) 120, 179, 188, 329, 450
DpnII GATC 5 cut(s) 118, 177, 186, 327, 448
EaeI YGGCCR 1 cut(s) 1036
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
EciI GGCGGA 2 cut(s) 324, 825
Eco130I CCWWGG 4 cut(s) 31, 199, 219, 1039
Eco31I GGTCTC 1 cut(s) 811
Eco32I GATATC 1 cut(s) 522
Eco57I CTGAAG 1 cut(s) 253
Eco88I CYCGRG 2 cut(s) 801, 932
EcoRI GAATTC 1 cut(s) 53
EcoRII CCWGG 1 cut(s) 487
EcoRV GATATC 1 cut(s) 522
EcoT14I CCWWGG 4 cut(s) 31, 199, 219, 1039
EcoT22I ATGCAT 1 cut(s) 286
ErhI CCWWGG 4 cut(s) 31, 199, 219, 1039
FaqI GGGAC 1 cut(s) 905
FauI CCCGC 1 cut(s) 882
FauNDI CATATG 2 cut(s) 376, 879
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 106
FokI GGATG 3 cut(s) 826, 1016, 1227
Fsp4HI GCNGC 1 cut(s) 106
FspBI CTAG 4 cut(s) 74, 500, 714, 1202
GlaI GCGC 1 cut(s) 1071
GluI GCNGC 1 cut(s) 106
HaeIII GGCC 3 cut(s) 253, 1038, 1194
HapII CCGG 4 cut(s) 146, 182, 802, 1094
HhaI GCGC 1 cut(s) 1072
Hin6I GCGC 1 cut(s) 1070
HinP1I GCGC 1 cut(s) 1070
HindIII AAGCTT 1 cut(s) 629
HinfI GANTC 8 cut(s) 95, 311, 461, 470, 752, 862, 926, 1232
HpaII CCGG 4 cut(s) 146, 182, 802, 1094
HphI GGTGA 5 cut(s) 581, 734, 946, 986, 1174
Hpy166II GTNNAC 3 cut(s) 7, 226, 1152
Hpy188I TCNGA 4 cut(s) 272, 316, 867, 918
Hpy188III TCNNGA 5 cut(s) 58, 500, 843, 932, 997
Hpy8I GTNNAC 3 cut(s) 7, 226, 1152
Hpy99I CGWCG 1 cut(s) 786
HpyAV CCTTC 8 cut(s) 277, 489, 751, 879, 971, 1094, 1153, 1204
HpyCH4III ACNGT 1 cut(s) 767
HpyCH4IV ACGT 1 cut(s) 1006
HpyCH4V TGCA 9 cut(s) 38, 284, 362, 374, 398, 655, 907, 1124, 1227
HpyF3I CTNAG 5 cut(s) 10, 307, 632, 825, 864
HpySE526I ACGT 1 cut(s) 1006
HspAI GCGC 1 cut(s) 1070
Kzo9I GATC 5 cut(s) 118, 177, 186, 327, 448
LmnI GCTCC 1 cut(s) 221
LweI GCATC 2 cut(s) 271, 946
MaeI CTAG 4 cut(s) 74, 500, 714, 1202
MaeII ACGT 1 cut(s) 1006
MaeIII GTNAC 2 cut(s) 302, 952
MalI GATC 5 cut(s) 120, 179, 188, 329, 450
MboI GATC 5 cut(s) 118, 177, 186, 327, 448
MboII GAAGA 4 cut(s) 104, 584, 659, 1109
MflI RGATCY 3 cut(s) 177, 186, 327
MhlI GDGCHC 1 cut(s) 802
MluCI AATT 5 cut(s) 53, 63, 555, 869, 966
MlyI GAGTC 4 cut(s) 305, 479, 856, 1226
MnlI CCTC 5 cut(s) 162, 201, 568, 852, 1162
Mph1103I ATGCAT 1 cut(s) 286
MseI TTAA 3 cut(s) 236, 423, 554
MslI CAYNNNNRTG 1 cut(s) 1038
MspI CCGG 4 cut(s) 146, 182, 802, 1094
MspR9I CCNGG 5 cut(s) 146, 182, 489, 802, 803
Mva1269I GAATGC 1 cut(s) 387
MvaI CCWGG 1 cut(s) 489
MvnI CGCG 1 cut(s) 1070
NciI CCSGG 4 cut(s) 146, 182, 802, 803
NcoI CCATGG 3 cut(s) 31, 199, 1039
NdeI CATATG 2 cut(s) 376, 879
NdeII GATC 5 cut(s) 118, 177, 186, 327, 448
NlaIV GGNNCC 4 cut(s) 179, 217, 799, 1195
NmuCI GTSAC 1 cut(s) 952
NsiI ATGCAT 1 cut(s) 286
NspI RCATGY 1 cut(s) 411
NspV TTCGAA 3 cut(s) 755, 964, 1157
PaeR7I CTCGAG 1 cut(s) 932
PcsI WCGNNNNNNNCGW 1 cut(s) 479
PctI GAATGC 1 cut(s) 387
PfeI GAWTC 4 cut(s) 95, 461, 752, 926
PflFI GACNNNGTC 1 cut(s) 355
PflMI CCANNNNNTGG 1 cut(s) 354
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 1 cut(s) 107
PleI GAGTC 4 cut(s) 305, 478, 856, 1226
PpsI GAGTC 4 cut(s) 305, 478, 856, 1226
PshBI ATTAAT 2 cut(s) 423, 554
Psp1406I AACGTT 1 cut(s) 1006
Psp6I CCWGG 1 cut(s) 487
PspGI CCWGG 1 cut(s) 487
PspN4I GGNNCC 4 cut(s) 179, 217, 799, 1195
PspPI GGNCC 1 cut(s) 1193
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 3 cut(s) 177, 186, 327
PsyI GACNNNGTC 1 cut(s) 355
RsaI GTAC 1 cut(s) 607
RsaNI GTAC 1 cut(s) 606
RseI CAYNNNNRTG 1 cut(s) 1038
SaqAI TTAA 3 cut(s) 236, 423, 554
SatI GCNGC 1 cut(s) 106
Sau3AI GATC 5 cut(s) 118, 177, 186, 327, 448
Sau96I GGNCC 1 cut(s) 1193
SchI GAGTC 4 cut(s) 305, 479, 856, 1226
ScrFI CCNGG 5 cut(s) 146, 182, 489, 802, 803
SduI GDGCHC 1 cut(s) 802
SfaNI GCATC 2 cut(s) 271, 946
SfcI CTRYAG 2 cut(s) 99, 360
Sfr274I CTCGAG 1 cut(s) 932
SfuI TTCGAA 3 cut(s) 755, 964, 1157
SlaI CTCGAG 1 cut(s) 932
SmaI CCCGGG 1 cut(s) 803
SmiMI CAYNNNNRTG 1 cut(s) 1038
SmlI CTYRAG 1 cut(s) 932
SmoI CTYRAG 1 cut(s) 932
Sse9I AATT 5 cut(s) 53, 63, 555, 869, 966
SsiI CCGC 4 cut(s) 105, 335, 836, 889
SspMI CTAG 4 cut(s) 74, 500, 714, 1202
StyD4I CCNGG 5 cut(s) 144, 180, 487, 800, 801
StyI CCWWGG 4 cut(s) 31, 199, 219, 1039
TaaI ACNGT 1 cut(s) 767
TaiI ACGT 1 cut(s) 1009
TaqI TCGA 7 cut(s) 57, 141, 755, 933, 964, 1021, 1157
TasI AATT 5 cut(s) 53, 63, 555, 869, 966
TauI GCSGC 1 cut(s) 108
TfiI GAWTC 4 cut(s) 95, 461, 752, 926
Tru1I TTAA 3 cut(s) 236, 423, 554
Tru9I TTAA 3 cut(s) 236, 423, 554
TscAI CASTG 4 cut(s) 772, 1131, 1195, 1234
TseFI GTSAC 1 cut(s) 952
Tsp45I GTSAC 1 cut(s) 952
TspDTI ATGAA 8 cut(s) 8, 60, 105, 255, 441, 587, 866, 999
TspMI CCCGGG 1 cut(s) 801
TspRI CASTG 4 cut(s) 772, 1131, 1195, 1234
Tth111I GACNNNGTC 1 cut(s) 355
Van91I CCANNNNNTGG 1 cut(s) 354
VspI ATTAAT 2 cut(s) 423, 554
XapI RAATTY 1 cut(s) 53
XbaI TCTAGA 1 cut(s) 499
XceI RCATGY 1 cut(s) 411
XhoI CTCGAG 1 cut(s) 932
XmaI CCCGGG 1 cut(s) 801
XmiI GTMKAC 1 cut(s) 225
XspI CTAG 4 cut(s) 74, 500, 714, 1202
Zsp2I ATGCAT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.