RLG00000003975

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000150
Physical Location & Seq
Reverse (-)
54913673 .. 54917521
3849 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003975

Sequence Viewer

Length: 1500 bp
ATGAAGATCAAGGCTCAGCTGAAGCCCAACCCAGAACGGCGTTGCCCTAATACCTTGGTATTTATCAGTCTTTTCTGTTCCTCCGCGGCTTCAATTGAATTCACCATCTCGGGGAGCCGCTACTCAGTAACCATGCCATGCCCCCGGGAGCTCAGTGAACCAGATCATGGCTCAAACTTAGCTGAACCAGATCGCAACTTAAGCAATCAACCCTTGAAGAAGGGGGAATGCAGAAGTGTTTATTTTCTGTTGAACTTGGAAGGCAGTGGACGTGGACATGTCCTATATGAAGTAAAGATCGAAGGGGGAAAAATCTTGGGAAAAGGTGGTGAATTTCTTGATCCTGTATCCAAGTTTTTTGATAGAAGTAATCCTGATGTCCCAGCGGTATATCTCTTGGGGGCTACCAGGGTCAACAGCCGCACCAAATTATATTTATTGCAACGTGAGGGTTTTAGCCAATTGCGGCTCAAGGGGTGCAGCACCCGCGGCTATCACTCATATCAAGCATGCACTTTCGACGTAGTGACTGAGGAATTTAAGCCGTTCAAGCCGCCGGAGAAAAACAAAACAGCTGCACTTCTTATTTCAGCTTATGGCAAGCTTTATCATCTTGCACATCCCACAGCCTACACTTCGGATGGAATGCCAGACCCGGCTTTTGAGGTTTATGATCCACACTCTGACTCCTGGAAGAGATGCTCTCCATTTCCTCGCTATCAGAAGGACTGGTCTTTCACTAGAATAAATGGTTATGCTATTTGTTACGGCTGTATTCTGGTTTCTATGCAGCCTGATGAGAAATGTGAGATGTGGGTATATCAGGTGACTTTGGATAAATGGAGAGAGGTTAATATCCCTACTGATGACAATTCGGATATTTATTATCCTTTTCATGGGAAAGCTGTGGTTATAGACAATATTATTTATGCCTTATCTGGAAACGAAACGGTTATAGCATTCTCTCTTATGACAAAACAAATGGCAGACGGTAGTATAGAGTACTCTGTGGACAAACCACGTCTGCTGCATGGCTTGCGTACATGTTTTCACATGGATTCTGATTGTTATGGTAGGACTGAGTGTTTGGTTCATTTGGGGGGCTTGAACTTTTGCCTTCTGCAAACTATCATGAAATATGTCAACAAACAACGTGTGTGGATCACCACATTTGATATTATTTACAAAGAAGGAAAGAGGCGTATCCGTACTCTAGATACTACCATGCGTGAAGTAGATATTAACTGTCTTGGTCGATTCAAACTTGAATCAGGCTTCACGCTAGAATGTGAAGAAGGAAAAGAGATTGTTAGCAGCAGCAGTATGATGCAGCCTGCTGATGATCCTCGATTGTGCAAGCTTCAACAGGCTGCATGCAATAAGATAAGGAAGCAGATTCGGAAGCGGAGATGGATGACGTCAAACTTGAGTTCGCGGAAGTTAACCTTGTTGGGAAATCTGTTCAGACCCTGTCGAGAACCAAAGTTTGGTGTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

500

Amino Acids

57.03

Weight (kDa)

8.92

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1421
AccB7I CCANNNNNTGG 2 cut(s) 167, 1487
AccII CGCG 3 cut(s) 86, 489, 1435
AclWI GGATC 4 cut(s) 335, 668, 1169, 1337
AcsI RAATTY 3 cut(s) 98, 332, 536
AcuI CTGAAG 1 cut(s) 41
AcyI GRCGYC 1 cut(s) 1418
AfaI GTAC 3 cut(s) 1004, 1042, 1210
AfiI CCNNNNNNNGG 4 cut(s) 111, 167, 896, 1487
AflII CTTAAG 1 cut(s) 199
AflIII ACRYGT 3 cut(s) 277, 1043, 1153
AgsI TTSAA 9 cut(s) 93, 98, 217, 253, 550, 1108, 1261, 1268, 1364
AjiI CACGTC 2 cut(s) 272, 1022
AjnI CCWGG 2 cut(s) 407, 689
AjuI GAANNNNNNNTTGG 1 cut(s) 1470
AluBI AGCT 8 cut(s) 19, 151, 182, 575, 593, 604, 905, 1360
AluI AGCT 8 cut(s) 19, 151, 182, 575, 593, 604, 905, 1360
Alw21I GWGCWC 1 cut(s) 153
AlwI GGATC 4 cut(s) 335, 668, 1169, 1337
AlwNI CAGNNNCTG 1 cut(s) 1470
Ama87I CYCGRG 2 cut(s) 109, 144
ApeKI GCWGC 8 cut(s) 480, 575, 790, 1027, 1314, 1317, 1330, 1370
ApoI RAATTY 3 cut(s) 98, 332, 536
ArsI GACNNNNNNTTYG 4 cut(s) 644, 676, 1069, 1101
AsuC2I CCSGG 3 cut(s) 145, 146, 656
AsuHPI GGTGA 4 cut(s) 94, 341, 838, 1156
AvaI CYCGRG 2 cut(s) 109, 144
BanII GRGCYC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 8 cut(s) 492, 562, 802, 1014, 1326, 1329, 1342, 1357
BccI CCATC 3 cut(s) 113, 635, 1404
BceAI ACGGC 3 cut(s) 53, 529, 784
BciT130I CCWGG 2 cut(s) 409, 691
BciVI GTATCC 2 cut(s) 358, 1214
BcnI CCSGG 3 cut(s) 145, 146, 656
BfaI CTAG 3 cut(s) 741, 1214, 1283
BfrI CTTAAG 1 cut(s) 199
BfuI GTATCC 2 cut(s) 358, 1214
BlpI GCTNAGC 1 cut(s) 15
BmcAI AGTACT 1 cut(s) 1004
Bme1390I CCNGG 5 cut(s) 145, 146, 409, 656, 691
BmeT110I CYCGRG 2 cut(s) 109, 144
BmgBI CACGTC 2 cut(s) 272, 1022
BmiI GGNNCC 1 cut(s) 116
BmrFI CCNGG 5 cut(s) 145, 146, 409, 656, 691
BmsI GCATC 2 cut(s) 689, 1317
BplI GAGNNNNNCTC 2 cut(s) 688, 720
Bpu1102I GCTNAGC 1 cut(s) 15
BpuEI CTTGAG 2 cut(s) 455, 1447
BpuMI CCSGG 3 cut(s) 145, 146, 656
BsaHI GRCGYC 1 cut(s) 1418
BsaJI CCNNGG 6 cut(s) 54, 84, 143, 144, 408, 487
BsaXI ACNNNNNCTCC 2 cut(s) 671, 701
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 167, 896, 1487
Bse1I ACTGG 1 cut(s) 734
BseBI CCWGG 2 cut(s) 409, 691
BseDI CCNNGG 6 cut(s) 54, 84, 143, 144, 408, 487
BseGI GGATG 3 cut(s) 619, 646, 1419
BseLI CCNNNNNNNGG 4 cut(s) 111, 167, 896, 1487
BseMII CTCAG 5 cut(s) 29, 138, 166, 522, 1071
BseNI ACTGG 1 cut(s) 734
BseXI GCAGC 8 cut(s) 492, 562, 802, 1014, 1326, 1329, 1342, 1357
BseYI CCCAGC 1 cut(s) 382
BsgI GTGCAG 2 cut(s) 499, 561
Bsh1236I CGCG 3 cut(s) 86, 489, 1435
BsiHKAI GWGCWC 1 cut(s) 153
BsiHKCI CYCGRG 2 cut(s) 109, 144
BsiSI CCGG 3 cut(s) 145, 557, 656
BslFI GGGAC 1 cut(s) 365
BslI CCNNNNNNNGG 4 cut(s) 111, 167, 896, 1487
BsmFI GGGAC 1 cut(s) 365
BsmI GAATGC 3 cut(s) 233, 651, 959
BsoBI CYCGRG 2 cut(s) 109, 144
Bsp1286I GDGCHC 1 cut(s) 153
Bsp143I GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
Bsp1720I GCTNAGC 1 cut(s) 15
BspCNI CTCAG 5 cut(s) 28, 137, 165, 523, 1072
BspFNI CGCG 3 cut(s) 86, 489, 1435
BspHI TCATGA 1 cut(s) 1131
BspLI GGNNCC 1 cut(s) 116
BspPI GGATC 4 cut(s) 335, 668, 1169, 1337
BspTI CTTAAG 1 cut(s) 199
BsrI ACTGG 1 cut(s) 734
BssECI CCNNGG 6 cut(s) 54, 84, 143, 144, 408, 487
BssMI GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
BssNI GRCGYC 1 cut(s) 1418
BssT1I CCWWGG 1 cut(s) 54
Bst2UI CCWGG 2 cut(s) 409, 691
Bst4CI ACNGT 3 cut(s) 952, 992, 1247
Bst6I CTCTTC 1 cut(s) 689
BstACI GRCGYC 1 cut(s) 1418
BstAFI CTTAAG 1 cut(s) 199
BstAPI GCANNNNNTGC 1 cut(s) 1036
BstC8I GCNNGC 6 cut(s) 511, 602, 1037, 1335, 1358, 1375
BstDEI CTNAG 6 cut(s) 15, 124, 152, 178, 531, 1080
BstDSI CCRYGG 2 cut(s) 84, 487
BstF5I GGATG 3 cut(s) 619, 646, 1419
BstFNI CGCG 3 cut(s) 86, 489, 1435
BstKTI GATC 8 cut(s) 9, 166, 193, 300, 343, 676, 1164, 1345
BstMBI GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
BstMWI GCNNNNNNNGC 5 cut(s) 201, 486, 489, 550, 1036
BstNI CCWGG 2 cut(s) 409, 691
BstNSI RCATGY 4 cut(s) 281, 513, 1047, 1377
BstSCI CCNGG 5 cut(s) 143, 144, 407, 654, 689
BstUI CGCG 3 cut(s) 86, 489, 1435
BstV1I GCAGC 8 cut(s) 492, 562, 802, 1014, 1326, 1329, 1342, 1357
BsuI GTATCC 2 cut(s) 358, 1214
BtgI CCRYGG 2 cut(s) 84, 487
BtrI CACGTC 2 cut(s) 272, 1022
BtsCI GGATG 3 cut(s) 619, 646, 1419
BtsI GCAGTG 1 cut(s) 271
BtsIMutI CAGTG 2 cut(s) 160, 271
Cac8I GCNNGC 6 cut(s) 511, 602, 1037, 1335, 1358, 1375
CaiI CAGNNNCTG 1 cut(s) 1470
CciI TCATGA 1 cut(s) 1131
Cfr42I CCGCGG 2 cut(s) 87, 490
Cfr9I CCCGGG 1 cut(s) 144
Csp6I GTAC 3 cut(s) 1003, 1041, 1209
CspCI CAANNNNNGTGG 2 cut(s) 1139, 1174
CviQI GTAC 3 cut(s) 1003, 1041, 1209
DdeI CTNAG 6 cut(s) 15, 124, 152, 178, 531, 1080
DpnI GATC 8 cut(s) 8, 165, 192, 299, 342, 675, 1163, 1344
DpnII GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
Eam1104I CTCTTC 1 cut(s) 689
EarI CTCTTC 1 cut(s) 689
Ecl136II GAGCTC 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 54
Eco24I GRGCYC 1 cut(s) 153
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 41
Eco88I CYCGRG 2 cut(s) 109, 144
EcoICRI GAGCTC 1 cut(s) 151
EcoRI GAATTC 1 cut(s) 98
EcoRII CCWGG 2 cut(s) 407, 689
EcoT14I CCWWGG 1 cut(s) 54
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 1 cut(s) 54
FalI AAGNNNNNCTT 2 cut(s) 1430, 1462
FaqI GGGAC 1 cut(s) 365
FauI CCCGC 1 cut(s) 494
FokI GGATG 3 cut(s) 606, 653, 1426
FriOI GRGCYC 1 cut(s) 153
FspBI CTAG 3 cut(s) 741, 1214, 1283
GsaI CCCAGC 1 cut(s) 386
HapII CCGG 3 cut(s) 145, 557, 656
Hin1I GRCGYC 1 cut(s) 1418
HincII GTYRAC 3 cut(s) 415, 1144, 1443
HindII GTYRAC 3 cut(s) 415, 1144, 1443
HindIII AAGCTT 2 cut(s) 602, 1358
HinfI GANTC 5 cut(s) 686, 1058, 1257, 1268, 1396
HpaI GTTAAC 1 cut(s) 1443
HpaII CCGG 3 cut(s) 145, 557, 656
HphI GGTGA 4 cut(s) 94, 341, 838, 1156
Hpy166II GTNNAC 7 cut(s) 158, 269, 275, 415, 1012, 1144, 1443
Hpy188I TCNGA 8 cut(s) 640, 685, 723, 877, 1063, 1401, 1466, 1499
Hpy188III TCNNGA 6 cut(s) 338, 374, 939, 1132, 1214, 1475
Hpy8I GTNNAC 7 cut(s) 158, 269, 275, 415, 1012, 1144, 1443
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 7 cut(s) 214, 254, 296, 718, 1127, 1184, 1289
HpyCH4III ACNGT 3 cut(s) 952, 992, 1247
HpyCH4IV ACGT 6 cut(s) 271, 445, 522, 1021, 1153, 1418
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 486, 489, 550, 1036
HpyF3I CTNAG 6 cut(s) 15, 124, 152, 178, 531, 1080
HpySE526I ACGT 6 cut(s) 271, 445, 522, 1021, 1153, 1418
Hsp92I GRCGYC 1 cut(s) 1418
KspAI GTTAAC 1 cut(s) 1443
KspI CCGCGG 2 cut(s) 87, 490
Kzo9I GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
LmnI GCTCC 2 cut(s) 114, 148
Lsp1109I GCAGC 8 cut(s) 492, 562, 802, 1014, 1326, 1329, 1342, 1357
LweI GCATC 2 cut(s) 689, 1317
MaeI CTAG 3 cut(s) 741, 1214, 1283
MaeII ACGT 6 cut(s) 271, 445, 522, 1021, 1153, 1418
MaeIII GTNAC 4 cut(s) 127, 526, 764, 826
MalI GATC 8 cut(s) 8, 165, 192, 299, 342, 675, 1163, 1344
MboI GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
MboII GAAGA 4 cut(s) 16, 229, 706, 1304
MfeI CAATTG 2 cut(s) 93, 461
MhlI GDGCHC 1 cut(s) 153
MluCI AATT 7 cut(s) 93, 98, 332, 428, 461, 536, 871
MlyI GAGTC 1 cut(s) 680
MnlI CCTC 8 cut(s) 91, 442, 526, 658, 723, 841, 1191, 1356
MseI TTAA 5 cut(s) 200, 540, 852, 1242, 1442
MspA1I CMGCKG 5 cut(s) 19, 86, 386, 489, 575
MspCI CTTAAG 1 cut(s) 199
MspI CCGG 3 cut(s) 145, 557, 656
MspR9I CCNGG 5 cut(s) 145, 146, 409, 656, 691
MunI CAATTG 2 cut(s) 93, 461
Mva1269I GAATGC 3 cut(s) 233, 651, 959
MvaI CCWGG 2 cut(s) 409, 691
MvnI CGCG 3 cut(s) 86, 489, 1435
MwoI GCNNNNNNNGC 5 cut(s) 201, 486, 489, 550, 1036
NciI CCSGG 3 cut(s) 145, 146, 656
NdeII GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
NlaIV GGNNCC 1 cut(s) 116
NmuCI GTSAC 2 cut(s) 526, 826
NspI RCATGY 4 cut(s) 281, 513, 1047, 1377
PaeI GCATGC 2 cut(s) 513, 1377
PagI TCATGA 1 cut(s) 1131
PciI ACATGT 2 cut(s) 277, 1043
PctI GAATGC 3 cut(s) 233, 651, 959
PfeI GAWTC 4 cut(s) 1058, 1257, 1268, 1396
PflFI GACNNNGTC 1 cut(s) 1470
PflMI CCANNNNNTGG 2 cut(s) 167, 1487
PfoI TCCNGGA 1 cut(s) 689
PleI GAGTC 1 cut(s) 680
PpsI GAGTC 1 cut(s) 680
PscI ACATGT 2 cut(s) 277, 1043
Psp124BI GAGCTC 1 cut(s) 153
Psp6I CCWGG 2 cut(s) 407, 689
PspFI CCCAGC 1 cut(s) 382
PspGI CCWGG 2 cut(s) 407, 689
PspN4I GGNNCC 1 cut(s) 116
PstNI CAGNNNCTG 1 cut(s) 1470
PsyI GACNNNGTC 1 cut(s) 1470
PvuII CAGCTG 2 cut(s) 19, 575
RsaI GTAC 3 cut(s) 1004, 1042, 1210
RsaNI GTAC 3 cut(s) 1003, 1041, 1209
SacI GAGCTC 1 cut(s) 153
SacII CCGCGG 2 cut(s) 87, 490
SaqAI TTAA 5 cut(s) 200, 540, 852, 1242, 1442
Sau3AI GATC 8 cut(s) 6, 163, 190, 297, 340, 673, 1161, 1342
ScaI AGTACT 1 cut(s) 1004
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 5 cut(s) 145, 146, 409, 656, 691
SduI GDGCHC 1 cut(s) 153
SfaNI GCATC 2 cut(s) 689, 1317
Sfr303I CCGCGG 2 cut(s) 87, 490
SgrBI CCGCGG 2 cut(s) 87, 490
SmaI CCCGGG 1 cut(s) 146
SmlI CTYRAG 3 cut(s) 199, 470, 1426
SmoI CTYRAG 3 cut(s) 199, 470, 1426
SphI GCATGC 2 cut(s) 513, 1377
Sse9I AATT 7 cut(s) 93, 98, 332, 428, 461, 536, 871
SspI AATATT 1 cut(s) 922
SspMI CTAG 3 cut(s) 741, 1214, 1283
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 5 cut(s) 143, 144, 407, 654, 689
StyI CCWWGG 1 cut(s) 54
TaaI ACNGT 3 cut(s) 952, 992, 1247
TaiI ACGT 6 cut(s) 274, 448, 525, 1024, 1156, 1421
TaqI TCGA 5 cut(s) 300, 519, 1255, 1348, 1474
TasI AATT 7 cut(s) 93, 98, 332, 428, 461, 536, 871
TatI WGTACW 1 cut(s) 1002
TauI GCSGC 6 cut(s) 89, 120, 423, 469, 492, 556
TfiI GAWTC 4 cut(s) 1058, 1257, 1268, 1396
Tru1I TTAA 5 cut(s) 200, 540, 852, 1242, 1442
Tru9I TTAA 5 cut(s) 200, 540, 852, 1242, 1442
TscAI CASTG 2 cut(s) 160, 271
TseFI GTSAC 2 cut(s) 526, 826
TseI GCWGC 8 cut(s) 480, 575, 790, 1027, 1314, 1317, 1330, 1370
Tsp45I GTSAC 2 cut(s) 526, 826
TspDTI ATGAA 5 cut(s) 17, 303, 884, 1082, 1148
TspGWI ACGGA 1 cut(s) 1196
TspMI CCCGGG 1 cut(s) 144
TspRI CASTG 2 cut(s) 160, 271
Tth111I GACNNNGTC 1 cut(s) 1470
Van91I CCANNNNNTGG 2 cut(s) 167, 1487
Vha464I CTTAAG 1 cut(s) 199
XapI RAATTY 3 cut(s) 98, 332, 536
XbaI TCTAGA 1 cut(s) 1213
XceI RCATGY 4 cut(s) 281, 513, 1047, 1377
XmaI CCCGGG 1 cut(s) 144
XspI CTAG 3 cut(s) 741, 1214, 1283
ZraI GACGTC 1 cut(s) 1419
ZrmI AGTACT 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.