MD17G1269500.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000150
Physical Location & Seq
Forward (+)
32945496 .. 32947197
1702 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1269500.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGTGGCATTTACTACTGTTGCCCAGCTTGCACATGATAAGGCAGGAGAGAAGAGCTTATAAATCTGTGTTTGTATTGGCGGGATCTTGTCAACCCCCATATAAGGGCAAGTTATATGAAGTCGAAATCCGTCAAGGATCAGAAGGAACAGGAGGAGCCACTCACATTGCTAAACAACCCGTGGCCAGGTTTTTTGATCAAGAGGGTTTGCTGTTCTCGCGTCAAGCTGTCTTGCACGGTGCGAGCATCTGCAGCCCCTCAACTCCCTCCAAGTTATACATGTTGCTAAATAACCTACCCATGCCCCTTGGCCCCCCTCCCTCCATGACACCCGACTCATTGAAGGGATATGTTTATGACACACAGAGTATGTCATGGGGTACGTTCAGGTCCCCCAAGTCATCTAAGCCAATTGGAACCATGATTGCTGCGTATGGAAAGCTTTATTATCTTGCAAGTCCAGCATGCCTCGTATATGAGATGCCATCTCCACCCTTTGAGCGATATGATCCCGGCGCAGACCGTTGGGAGACTCTCCCAATTCTACCCTCCAAACCTGTGTATTGTGAGGAGATAGTTGGTTATGCCGTATGCTGCGGTTATATTTTGGTTTCATTATATGGCAGCAAAGGATTTAGATTCATGGCATTTCACGTAACTCGAGAAAAATGGTACCCTGTAAAGTCAGAAGTACCTCGTCGTGACCGGTGCGGTTATCCTTTCCGGGGGAGGGCCGTGGTTGTGGGCGATAGCATCTATGCCTCGTCCAACAGATATGGCGACGTTATAGAGTTCAACTTCAATTCTACTACCTATTCGGTGAGCAGGCCATTGACGTTGCCAGGTTTGAAATGCCACACAGAGTCTGTGCATTGCGACCCTACTAGAAGGCGAACGGATTATTTCGTTCACCTGGGGGGTTCAGACTTTTGCCTTGTCCAGACTGCCATGGAGAGCTGCAGAAGTGATTGTCAACCACTGTGGGTCACCACGTTCCGAATCGTCGTTGCAAGTGGAGGAGGAAGCTATATCGAGACCTTGCATTCAACGGCATGTGATGTGGACATCGGCGGGGCTAGTTTCCATATTAGGTACAGCTTTGCAAAAGACGAGGAGTGCGATGGTGTTGGACCCGTAGAAGAGGAAAATGGTTCGGCCTCTGATGCAGATGCAGAAGACTACGGTTTTTCACCGGATGAAGACGAATCGAACAGCGAGGAGACAAGTGGGGAAGATGACGAAGATGATAAAGATTATATGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

422

Amino Acids

46.87

Weight (kDa)

5.31

Isoelectric Point (pI)

64.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 145 - 324 7.8e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
Acc65I GGTACC 1 cut(s) 672
AccB1I GGYRCC 1 cut(s) 672
AccII CGCG 1 cut(s) 220
AciI CCGC 4 cut(s) 80, 597, 711, 1071
AclWI GGATC 3 cut(s) 91, 145, 503
AcoI YGGCCR 1 cut(s) 183
AfaI GTAC 4 cut(s) 382, 674, 693, 1094
AfiI CCNNNNNNNGG 5 cut(s) 103, 104, 186, 725, 730
AflIII ACRYGT 1 cut(s) 279
AgeI ACCGGT 1 cut(s) 705
AgsI TTSAA 5 cut(s) 343, 796, 802, 850, 1047
AjnI CCWGG 3 cut(s) 185, 841, 912
AluBI AGCT 7 cut(s) 27, 56, 227, 442, 957, 1026, 1098
AluI AGCT 7 cut(s) 27, 56, 227, 442, 957, 1026, 1098
Alw26I GTCTC 3 cut(s) 524, 1028, 1214
AlwI GGATC 3 cut(s) 91, 145, 503
AlwNI CAGNNNCTG 1 cut(s) 866
Ama87I CYCGRG 1 cut(s) 660
AoxI GGCC 5 cut(s) 183, 310, 732, 827, 1155
ApeKI GCWGC 5 cut(s) 252, 428, 594, 624, 957
AsiGI ACCGGT 1 cut(s) 705
Asp718I GGTACC 1 cut(s) 672
AspLEI GCGC 1 cut(s) 518
AspS9I GGNCC 4 cut(s) 311, 390, 732, 1130
AsuC2I CCSGG 2 cut(s) 513, 725
AsuHPI GGTGA 4 cut(s) 832, 902, 979, 1182
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 2 cut(s) 390, 1130
BalI TGGCCA 1 cut(s) 185
BanI GGYRCC 1 cut(s) 672
BbsI GAAGAC 2 cut(s) 1182, 1206
BbvI GCAGC 5 cut(s) 264, 415, 581, 636, 944
BccI CCATC 2 cut(s) 493, 1115
BceAI ACGGC 3 cut(s) 572, 719, 1065
BciT130I CCWGG 3 cut(s) 187, 843, 914
BclI TGATCA 1 cut(s) 196
BcnI CCSGG 2 cut(s) 513, 725
BcoDI GTCTC 3 cut(s) 524, 1028, 1214
BfaI CTAG 2 cut(s) 885, 1077
BfmI CTRYAG 2 cut(s) 250, 958
BisI GCNGC 5 cut(s) 253, 429, 595, 625, 958
BlsI GCNGC 5 cut(s) 254, 430, 596, 626, 959
Bme1390I CCNGG 5 cut(s) 187, 513, 725, 843, 914
Bme18I GGWCC 2 cut(s) 390, 1130
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 4 cut(s) 311, 390, 732, 1130
BmiI GGNNCC 6 cut(s) 157, 313, 392, 418, 674, 1132
BmrFI CCNGG 5 cut(s) 187, 513, 725, 843, 914
BmsI GCATC 5 cut(s) 255, 471, 762, 1153, 1159
BpiI GAAGAC 2 cut(s) 1182, 1206
BpuMI CCSGG 2 cut(s) 513, 725
BsaAI YACGTR 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 1028
BsaJI CCNNGG 6 cut(s) 180, 307, 724, 735, 913, 948
BsaWI WCCGGW 2 cut(s) 705, 1192
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 104, 186, 725, 730
Bse118I RCCGGY 1 cut(s) 705
Bse3DI GCAATG 2 cut(s) 165, 871
BseBI CCWGG 3 cut(s) 187, 843, 914
BseDI CCNNGG 6 cut(s) 180, 307, 724, 735, 913, 948
BseGI GGATG 1 cut(s) 1201
BseLI CCNNNNNNNGG 5 cut(s) 103, 104, 186, 725, 730
BseMI GCAATG 2 cut(s) 165, 871
BseRI GAGGAG 5 cut(s) 168, 584, 1032, 1127, 1232
BseXI GCAGC 5 cut(s) 264, 415, 581, 636, 944
BseYI CCCAGC 1 cut(s) 23
Bsh1236I CGCG 1 cut(s) 220
BshFI GGCC 5 cut(s) 185, 312, 734, 829, 1157
BshNI GGYRCC 1 cut(s) 672
BshTI ACCGGT 1 cut(s) 705
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 4 cut(s) 513, 706, 724, 1193
BslFI GGGAC 1 cut(s) 376
BslI CCNNNNNNNGG 5 cut(s) 103, 104, 186, 725, 730
BsmAI GTCTC 3 cut(s) 524, 1028, 1214
BsmFI GGGAC 1 cut(s) 376
BsmI GAATGC 1 cut(s) 1042
BsnI GGCC 5 cut(s) 185, 312, 734, 829, 1157
Bso31I GGTCTC 1 cut(s) 1028
BsoBI CYCGRG 1 cut(s) 660
Bsp143I GATC 4 cut(s) 83, 137, 196, 508
Bsp19I CCATGG 1 cut(s) 948
BspACI CCGC 4 cut(s) 80, 597, 711, 1071
BspANI GGCC 5 cut(s) 185, 312, 734, 829, 1157
BspFNI CGCG 1 cut(s) 220
BspLI GGNNCC 6 cut(s) 157, 313, 392, 418, 674, 1132
BspMAI CTGCAG 2 cut(s) 254, 962
BspPI GGATC 3 cut(s) 91, 145, 503
BspQI GCTCTTC 1 cut(s) 46
BspT107I GGYRCC 1 cut(s) 672
BspTNI GGTCTC 1 cut(s) 1028
BsrDI GCAATG 2 cut(s) 165, 871
BsrFI RCCGGY 1 cut(s) 705
BssAI RCCGGY 1 cut(s) 705
BssECI CCNNGG 6 cut(s) 180, 307, 724, 735, 913, 948
BssMI GATC 4 cut(s) 83, 137, 196, 508
BssT1I CCWWGG 2 cut(s) 307, 948
Bst2UI CCWGG 3 cut(s) 187, 843, 914
Bst4CI ACNGT 5 cut(s) 18, 239, 524, 981, 1184
Bst6I CTCTTC 2 cut(s) 46, 1134
BstBAI YACGTR 1 cut(s) 655
BstC8I GCNNGC 4 cut(s) 29, 244, 466, 827
BstDEI CTNAG 1 cut(s) 405
BstDSI CCRYGG 3 cut(s) 180, 735, 948
BstEII GGTNACC 1 cut(s) 985
BstF5I GGATG 1 cut(s) 1201
BstFNI CGCG 1 cut(s) 220
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 4 cut(s) 86, 140, 199, 511
BstMAI GTCTC 3 cut(s) 524, 1028, 1214
BstMBI GATC 4 cut(s) 83, 137, 196, 508
BstMWI GCNNNNNNNGC 5 cut(s) 28, 217, 252, 461, 1163
BstNI CCWGG 3 cut(s) 187, 843, 914
BstNSI RCATGY 3 cut(s) 283, 468, 1056
BstPI GGTNACC 1 cut(s) 985
BstSCI CCNGG 5 cut(s) 185, 511, 723, 841, 912
BstSFI CTRYAG 2 cut(s) 250, 958
BstUI CGCG 1 cut(s) 220
BstV1I GCAGC 5 cut(s) 264, 415, 581, 636, 944
BstV2I GAAGAC 2 cut(s) 1182, 1206
BstX2I RGATCY 1 cut(s) 83
BstYI RGATCY 1 cut(s) 83
BsuRI GGCC 5 cut(s) 185, 312, 734, 829, 1157
BtgI CCRYGG 3 cut(s) 180, 735, 948
BtgZI GCGATG 1 cut(s) 1134
BtsCI GGATG 1 cut(s) 1201
BtsIMutI CAGTG 1 cut(s) 977
Cac8I GCNNGC 4 cut(s) 29, 244, 466, 827
CaiI CAGNNNCTG 1 cut(s) 866
CfoI GCGC 1 cut(s) 518
Cfr10I RCCGGY 1 cut(s) 705
Cfr13I GGNCC 4 cut(s) 311, 390, 732, 1130
CseI GACGC 1 cut(s) 209
Csp6I GTAC 4 cut(s) 381, 673, 692, 1093
CspAI ACCGGT 1 cut(s) 705
CspCI CAANNNNNGTGG 4 cut(s) 148, 183, 962, 997
CviQI GTAC 4 cut(s) 381, 673, 692, 1093
DdeI CTNAG 1 cut(s) 405
DpnI GATC 4 cut(s) 85, 139, 198, 510
DpnII GATC 4 cut(s) 83, 137, 196, 508
EaeI YGGCCR 1 cut(s) 183
Eam1104I CTCTTC 2 cut(s) 46, 1134
EarI CTCTTC 2 cut(s) 46, 1134
Eco130I CCWWGG 2 cut(s) 307, 948
Eco31I GGTCTC 1 cut(s) 1028
Eco47I GGWCC 2 cut(s) 390, 1130
Eco88I CYCGRG 1 cut(s) 660
Eco91I GGTNACC 1 cut(s) 985
EcoO109I RGGNCCY 1 cut(s) 390
EcoO65I GGTNACC 1 cut(s) 985
EcoRII CCWGG 3 cut(s) 185, 841, 912
EcoT14I CCWWGG 2 cut(s) 307, 948
ErhI CCWWGG 2 cut(s) 307, 948
FaqI GGGAC 1 cut(s) 376
FauI CCCGC 2 cut(s) 73, 1064
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 5 cut(s) 253, 429, 595, 625, 958
FokI GGATG 1 cut(s) 1208
Fsp4HI GCNGC 5 cut(s) 253, 429, 595, 625, 958
FspBI CTAG 2 cut(s) 885, 1077
GlaI GCGC 1 cut(s) 517
GluI GCNGC 5 cut(s) 253, 429, 595, 625, 958
GsaI CCCAGC 1 cut(s) 27
HaeIII GGCC 5 cut(s) 185, 312, 734, 829, 1157
HapII CCGG 4 cut(s) 513, 706, 724, 1193
HgaI GACGC 1 cut(s) 209
HhaI GCGC 1 cut(s) 518
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HincII GTYRAC 2 cut(s) 92, 974
HindII GTYRAC 2 cut(s) 92, 974
HindIII AAGCTT 1 cut(s) 440
HinfI GANTC 6 cut(s) 335, 532, 639, 863, 999, 1205
HpaII CCGG 4 cut(s) 513, 706, 724, 1193
HphI GGTGA 4 cut(s) 832, 902, 979, 1182
Hpy166II GTNNAC 4 cut(s) 92, 910, 974, 1063
Hpy188I TCNGA 5 cut(s) 142, 688, 925, 998, 1162
Hpy188III TCNNGA 5 cut(s) 200, 662, 701, 940, 1033
Hpy8I GTNNAC 4 cut(s) 92, 910, 974, 1063
Hpy99I CGWCG 3 cut(s) 702, 785, 1007
HpyAV CCTTC 3 cut(s) 137, 337, 882
HpyCH4III ACNGT 5 cut(s) 18, 239, 524, 981, 1184
HpyCH4IV ACGT 5 cut(s) 383, 654, 783, 836, 992
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 217, 252, 461, 1163
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 5 cut(s) 383, 654, 783, 836, 992
HspAI GCGC 1 cut(s) 516
KpnI GGTACC 1 cut(s) 676
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 4 cut(s) 83, 137, 196, 508
LguI GCTCTTC 1 cut(s) 46
LmnI GCTCC 1 cut(s) 155
Lsp1109I GCAGC 5 cut(s) 264, 415, 581, 636, 944
LweI GCATC 5 cut(s) 255, 471, 762, 1153, 1159
MaeI CTAG 2 cut(s) 885, 1077
MaeII ACGT 5 cut(s) 383, 654, 783, 836, 992
MaeIII GTNAC 3 cut(s) 655, 701, 985
MalI GATC 4 cut(s) 85, 139, 198, 510
MboI GATC 4 cut(s) 83, 137, 196, 508
MboII GAAGA 6 cut(s) 63, 1151, 1187, 1211, 1244, 1253
MfeI CAATTG 1 cut(s) 411
MflI RGATCY 1 cut(s) 83
MlsI TGGCCA 1 cut(s) 185
MluCI AATT 3 cut(s) 411, 540, 802
MluNI TGGCCA 1 cut(s) 185
MlyI GAGTC 3 cut(s) 329, 526, 872
MmeI TCCRAC 2 cut(s) 792, 1108
Mox20I TGGCCA 1 cut(s) 185
MscI TGGCCA 1 cut(s) 185
Msp20I TGGCCA 1 cut(s) 185
MspI CCGG 4 cut(s) 513, 706, 724, 1193
MspR9I CCNGG 5 cut(s) 187, 513, 725, 843, 914
MunI CAATTG 1 cut(s) 411
Mva1269I GAATGC 1 cut(s) 1042
MvaI CCWGG 3 cut(s) 187, 843, 914
MvnI CGCG 1 cut(s) 220
MwoI GCNNNNNNNGC 5 cut(s) 28, 217, 252, 461, 1163
NciI CCSGG 2 cut(s) 513, 725
NcoI CCATGG 1 cut(s) 948
NdeII GATC 4 cut(s) 83, 137, 196, 508
NlaIV GGNNCC 6 cut(s) 157, 313, 392, 418, 674, 1132
NmuCI GTSAC 2 cut(s) 701, 985
NspI RCATGY 3 cut(s) 283, 468, 1056
PaeI GCATGC 1 cut(s) 468
PaeR7I CTCGAG 1 cut(s) 660
PciI ACATGT 1 cut(s) 279
PciSI GCTCTTC 1 cut(s) 46
PcsI WCGNNNNNNNCGW 1 cut(s) 1116
PctI GAATGC 1 cut(s) 1042
PfeI GAWTC 3 cut(s) 639, 999, 1205
PinAI ACCGGT 1 cut(s) 705
PkrI GCNGC 5 cut(s) 254, 430, 596, 626, 959
PleI GAGTC 3 cut(s) 329, 526, 871
PpsI GAGTC 3 cut(s) 329, 526, 871
Ppu21I YACGTR 1 cut(s) 655
PpuMI RGGWCCY 1 cut(s) 390
PscI ACATGT 1 cut(s) 279
PsiI TTATAA 1 cut(s) 60
Psp5II RGGWCCY 1 cut(s) 390
Psp6I CCWGG 3 cut(s) 185, 841, 912
PspEI GGTNACC 1 cut(s) 985
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 3 cut(s) 185, 841, 912
PspN4I GGNNCC 6 cut(s) 157, 313, 392, 418, 674, 1132
PspPI GGNCC 4 cut(s) 311, 390, 732, 1130
PspPPI RGGWCCY 1 cut(s) 390
PstI CTGCAG 2 cut(s) 254, 962
PstNI CAGNNNCTG 1 cut(s) 866
PsuI RGATCY 1 cut(s) 83
RsaI GTAC 4 cut(s) 382, 674, 693, 1094
RsaNI GTAC 4 cut(s) 381, 673, 692, 1093
SapI GCTCTTC 1 cut(s) 46
SatI GCNGC 5 cut(s) 253, 429, 595, 625, 958
Sau3AI GATC 4 cut(s) 83, 137, 196, 508
Sau96I GGNCC 4 cut(s) 311, 390, 732, 1130
SchI GAGTC 3 cut(s) 329, 526, 872
ScrFI CCNGG 5 cut(s) 187, 513, 725, 843, 914
SfaNI GCATC 5 cut(s) 255, 471, 762, 1153, 1159
SfcI CTRYAG 2 cut(s) 250, 958
Sfr274I CTCGAG 1 cut(s) 660
SinI GGWCC 2 cut(s) 390, 1130
SlaI CTCGAG 1 cut(s) 660
SmlI CTYRAG 1 cut(s) 660
SmoI CTYRAG 1 cut(s) 660
SphI GCATGC 1 cut(s) 468
Sse9I AATT 3 cut(s) 411, 540, 802
SsiI CCGC 4 cut(s) 80, 597, 711, 1071
SspMI CTAG 2 cut(s) 885, 1077
StyD4I CCNGG 5 cut(s) 185, 511, 723, 841, 912
StyI CCWWGG 2 cut(s) 307, 948
TaaI ACNGT 5 cut(s) 18, 239, 524, 981, 1184
TaiI ACGT 5 cut(s) 386, 657, 786, 839, 995
TaqI TCGA 4 cut(s) 123, 661, 1032, 1208
TasI AATT 3 cut(s) 411, 540, 802
TfiI GAWTC 3 cut(s) 639, 999, 1205
TscAI CASTG 1 cut(s) 984
TseFI GTSAC 2 cut(s) 701, 985
TseI GCWGC 5 cut(s) 252, 428, 594, 624, 957
Tsp45I GTSAC 2 cut(s) 701, 985
TspDTI ATGAA 4 cut(s) 132, 603, 631, 1212
TspGWI ACGGA 2 cut(s) 119, 911
TspRI CASTG 1 cut(s) 984
VpaK11BI GGWCC 2 cut(s) 390, 1130
XceI RCATGY 3 cut(s) 283, 468, 1056
XhoI CTCGAG 1 cut(s) 660
XspI CTAG 2 cut(s) 885, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.