RLG00000026778

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000150
Physical Location & Seq
Reverse (-)
5896137 .. 5989091
92955 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026778

Sequence Viewer

Length: 2334 bp
ATGGGCGGAGATGACGTTTTGCCGACTCAAATCCACATGAAGGGAGAGGAGGAGAAGGAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGGGAACAAGGGGCGACATGAGCCATCCCCTCCCAATACATGAGCAGTTTGTGCATGCGCTTCATACTTGTGAGACGTGTGGAAAATTGTTTGGCTCTGATGCTGACCTCCAGAGTCATAGGAAATCTAGACATCCGGAGGAGGAGGAGGAGGAGGCGAAGGTGAAGGGGGAGCATGCCAGCAGGTTGGTTTTGGATGTGGGTACAAGAGGCGACATGAGCCATCCCGATTGTCATGATGGTTTGCTCCAAGAACAAGAAGAGGAGAAGCTTTGGTCTTGTAAGTTCTGTCACCTGCGCTTTCCCGACCTTCAAGGACATATGCAGTTGGTGCATTATACTTGTGAGATATGTGGAGTATCGTTTCGCTCTGATGCTCAACTCCAGAGTCATAGGAAATCTAAACATCCGGGTTTAAAGAAGAAAAAGAAGAAGAAAAAGAAGCAGAAGCAGAAGCAGAAGAAGAAGCAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATAAGGCGAAGGTGAAGGGGGAGCATGCCAGCAGCTTCCCCATTGAGAAGACGATGAACAAGGCGCCCTCACCCTCACCCTCAATTTCTGACGAGAGCTTCCCCATTGAGAAGACGATGAACAAGGCGCCCTCACCCCCAATTTATGGCGAGAGCTTTCCCATGGAGAAGGTAGAGAACCGGCAGGAAGAAGAATCCGTATTTGTTATGGTGGAGTTCGATCAAAATGATTCCCACACCGGTGCCATATACAAAATCAAACTTGACCAACTTCAGCCACTTGAGCATGGTAAATCAGCGGGCGGACCTAAAACTGACCCTTCAAGTCTACCAATGCTCGAACCTGTAGTGAAGTTATTTGATAAGAGCTGGAAGATGGAGGAGGGGCTATGTTTACTTGATGGTACTAGGTTTGGCAGCCTCTCCAAGTTATATATTATGGTAAATGAAATCCCATGGGATTATCTCAAGCCCGTCACGCCCAAGCACGCATTTTTCTTCGACACGTCAAGCTTAGAACTACAGAAGATTTCTCCACCCAAAACGTCTAAGGAGTATTGTCTAGTTATATCAGCATATGGAATGCTGTACTATCTTGCACAACCAATGTGCTTTCCTCAGATTCAGGAACCATCGTTTGAGCGATATGATCCGTCCAGTGATTCATGGGAGTCCTTGCCTCCATTTCCAGATTATTCTCTACATCAGGCAGAGACTGAGATGACTGGTTATGCTGTTTGTTATGGATATATACTGTTGTCCATGCGAACTGACAAAAAATATGAAGCGGTGGCTTTTCATATTCATAGCAGAACATGGCACAAGGTGAAAACTAGTCCAGAGAATCCTTATTATTATCCTTTCTACGGGAGGGCTGTGGTTGTAGGTGACACTATCTATGCCTTGGCACATAGTCTGAATTTGGTTCTAGTATTCTCTTTCTGGTGGGATTCAGGTGAGGATGGTGATATTGCCAAGCGTCGACATTTTCTGGGCACTCCATTGTCTTTGGTATTAAAGGACAAGTTTCATCCGCCGTGCCTGTTAATAGGGTGTAGGACTCAGAGGTTGGTTCATTTAGGGAGACAGTACTTCTGTGTTGTACAGACCGGTCTAAACAATGATTCTCTTGAGTATCAGTACCTTTGTGCGACAACTTTTAGAATCGCCGGTCAAGGGCAAGAAATGAACATCGAGACTGTTCGGTCATCCATTTTCCGCATAGCGATTGAGGGGAATCACGAATTTGAAATCAAGTTCAGCTTCACGCCAGATTGCAATGACATTGAACCAGTGGAAGAACAATACTTTGTGTCTAGTGCATTGGCTGAAAGGGAAAGTGCGTGGACTTCGAAGGTCAAAGATGACTTCTTTTCCTTCCCAACTGGTCCTAAACTGGGATTGGAGGCATTCAGAACCAAAAAGGTCCAAACACTTGGCCCAAATGACAAAGTGAAGGCCAAGGCCAATAAACGGCAGCCCCAAAGGACATCCTGCCCAGGCCGAACAGCAAAGCCCAGCCCATCTTCTATCCACAGCCCCAAGCCTTCAAGCTCCACGCACTCCTACAGATTGCCGCCAGGACCCTGCCTTGCCGCCACTGTCTCCGAGCTAGCGCCCAACCTCGAAGAGAGGGATGAACCACACCACAGATTGAAACTCAAGCCCAACTCGGTATGGGTCGCACACTCACCGCCATTTGGAGCGAAACTCAGCTGCAGTCGTCCGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

778

Amino Acids

88.47

Weight (kDa)

8.09

Isoelectric Point (pI)

57.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-met PF12874 145 - 167 6.7e-06 Zinc-finger of C2H2 type
DUF1668 PF07893 362 - 574 5.5e-08 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 399
AasI GACNNNNNNGTC 1 cut(s) 1804
Acc36I ACCTGC 2 cut(s) 270, 399
AccB1I GGYRCC 3 cut(s) 664, 727, 842
AccB7I CCANNNNNTGG 1 cut(s) 746
AccI GTMKAC 2 cut(s) 928, 1582
AccIII TCCGGA 2 cut(s) 232, 2326
AciI CCGC 9 cut(s) 6, 899, 903, 1388, 1634, 1819, 2177, 2196, 2294
AclWI GGATC 1 cut(s) 1244
AcsI RAATTY 2 cut(s) 1519, 1844
AcuI CTGAAG 1 cut(s) 857
AcyI GRCGYC 2 cut(s) 665, 728
AdeI CACNNNGTG 1 cut(s) 1426
AfaI GTAC 6 cut(s) 301, 1006, 1190, 1691, 1704, 1742
AfiI CCNNNNNNNGG 7 cut(s) 40, 746, 1466, 1776, 1997, 2073, 2300
AflIII ACRYGT 2 cut(s) 173, 1104
AgeI ACCGGT 2 cut(s) 839, 1709
AgsI TTSAA 6 cut(s) 410, 924, 1850, 1889, 2151, 2257
AhlI ACTAGT 1 cut(s) 1433
AjiI CACGTC 2 cut(s) 174, 1107
AjnI CCWGG 2 cut(s) 2098, 2179
AleI CACNNNNGTG 1 cut(s) 840
Alw26I GTCTC 5 cut(s) 164, 1307, 1678, 1790, 2209
AlwI GGATC 1 cut(s) 1244
AlwNI CAGNNNCTG 1 cut(s) 1316
Aor13HI TCCGGA 2 cut(s) 232, 2326
AoxI GGCC 4 cut(s) 2038, 2058, 2064, 2101
ApeKI GCWGC 4 cut(s) 633, 1017, 2077, 2316
ApoI RAATTY 2 cut(s) 1519, 1844
AsiGI ACCGGT 2 cut(s) 839, 1709
AspLEI GCGC 5 cut(s) 157, 396, 667, 730, 2218
AspS9I GGNCC 5 cut(s) 905, 1988, 2026, 2039, 2183
AsuC2I CCSGG 1 cut(s) 507
AsuII TTCGAA 1 cut(s) 1952
AsuNHI GCTAGC 1 cut(s) 2212
AvaII GGWCC 4 cut(s) 905, 1988, 2026, 2183
BaeGI GKGCMC 1 cut(s) 1598
BanI GGYRCC 3 cut(s) 664, 727, 842
BbsI GAAGAC 2 cut(s) 656, 719
BbvI GCAGC 4 cut(s) 645, 1029, 2089, 2303
BccI CCATC 8 cut(s) 129, 327, 329, 970, 995, 1240, 1556, 2131
BceAI ACGGC 2 cut(s) 1621, 2090
BciT130I CCWGG 2 cut(s) 2100, 2181
BcnI CCSGG 1 cut(s) 507
BcoDI GTCTC 5 cut(s) 164, 1307, 1678, 1790, 2209
BcuI ACTAGT 1 cut(s) 1433
BfaI CTAG 7 cut(s) 225, 1008, 1163, 1434, 1529, 1917, 2213
BfmI CTRYAG 4 cut(s) 945, 1121, 2167, 2317
BfoI RGCGCY 3 cut(s) 668, 731, 2219
BfuAI ACCTGC 2 cut(s) 270, 399
BisI GCNGC 6 cut(s) 634, 1018, 2078, 2177, 2196, 2317
BlsI GCNGC 6 cut(s) 635, 1019, 2079, 2178, 2197, 2318
BmcAI AGTACT 1 cut(s) 1691
Bme1390I CCNGG 3 cut(s) 507, 2100, 2181
Bme18I GGWCC 4 cut(s) 905, 1988, 2026, 2183
BmgBI CACGTC 2 cut(s) 174, 1107
BmgT120I GGNCC 5 cut(s) 905, 1988, 2026, 2039, 2183
BmiI GGNNCC 5 cut(s) 666, 729, 844, 1230, 2185
BmrFI CCNGG 3 cut(s) 507, 2100, 2181
BmrI ACTGGG 1 cut(s) 2006
BmsI GCATC 2 cut(s) 187, 460
BmtI GCTAGC 1 cut(s) 2216
BmuI ACTGGG 1 cut(s) 2006
BpiI GAAGAC 2 cut(s) 656, 719
BplI GAGNNNNNCTC 2 cut(s) 2295, 2327
BpmI CTGGAG 2 cut(s) 191, 464
Bpu14I TTCGAA 1 cut(s) 1952
BpuEI CTTGAG 4 cut(s) 902, 1052, 1751, 2246
BpuMI CCSGG 1 cut(s) 507
BsaHI GRCGYC 2 cut(s) 665, 728
BsaJI CCNNGG 5 cut(s) 762, 1055, 1503, 2061, 2098
BsaWI WCCGGW 4 cut(s) 232, 839, 1709, 2326
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 746, 1466, 1776, 1997, 2073, 2300
Bse118I RCCGGY 4 cut(s) 780, 839, 1709, 1769
Bse1I ACTGG 5 cut(s) 1257, 1330, 1892, 1990, 2001
Bse3DI GCAATG 1 cut(s) 1885
BseAI TCCGGA 2 cut(s) 232, 2326
BseBI CCWGG 2 cut(s) 2100, 2181
BseDI CCNNGG 5 cut(s) 762, 1055, 1503, 2061, 2098
BseLI CCNNNNNNNGG 7 cut(s) 40, 746, 1466, 1776, 1997, 2073, 2300
BseMI GCAATG 1 cut(s) 1885
BseMII CTCAG 4 cut(s) 1232, 1308, 1676, 2326
BseNI ACTGG 5 cut(s) 1257, 1330, 1892, 1990, 2001
BseSI GKGCMC 1 cut(s) 1598
BseXI GCAGC 4 cut(s) 645, 1029, 2089, 2303
BseYI CCCAGC 1 cut(s) 2117
BshFI GGCC 4 cut(s) 2040, 2060, 2066, 2103
BshNI GGYRCC 3 cut(s) 664, 727, 842
BshTI ACCGGT 2 cut(s) 839, 1709
BsiSI CCGG 7 cut(s) 233, 506, 781, 840, 1710, 1770, 2327
BslI CCNNNNNNNGG 7 cut(s) 40, 746, 1466, 1776, 1997, 2073, 2300
BsmAI GTCTC 5 cut(s) 164, 1307, 1678, 1790, 2209
BsmBI CGTCTC 1 cut(s) 164
BsmI GAATGC 2 cut(s) 1188, 2009
BsnI GGCC 4 cut(s) 2040, 2060, 2066, 2103
Bsp119I TTCGAA 1 cut(s) 1952
Bsp1286I GDGCHC 1 cut(s) 1598
Bsp13I TCCGGA 2 cut(s) 232, 2326
Bsp1407I TGTACA 1 cut(s) 1702
Bsp143I GATC 2 cut(s) 820, 1249
Bsp19I CCATGG 2 cut(s) 762, 1055
BspACI CCGC 9 cut(s) 6, 899, 903, 1388, 1634, 1819, 2177, 2196, 2294
BspANI GGCC 4 cut(s) 2040, 2060, 2066, 2103
BspCNI CTCAG 4 cut(s) 1231, 1309, 1675, 2325
BspEI TCCGGA 2 cut(s) 232, 2326
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 5 cut(s) 666, 729, 844, 1230, 2185
BspMAI CTGCAG 1 cut(s) 2321
BspMI ACCTGC 2 cut(s) 270, 399
BspOI GCTAGC 1 cut(s) 2216
BspPI GGATC 1 cut(s) 1244
BspT104I TTCGAA 1 cut(s) 1952
BspT107I GGYRCC 3 cut(s) 664, 727, 842
BsrDI GCAATG 1 cut(s) 1885
BsrFI RCCGGY 4 cut(s) 780, 839, 1709, 1769
BsrGI TGTACA 1 cut(s) 1702
BsrI ACTGG 5 cut(s) 1257, 1330, 1892, 1990, 2001
BssAI RCCGGY 4 cut(s) 780, 839, 1709, 1769
BssECI CCNNGG 5 cut(s) 762, 1055, 1503, 2061, 2098
BssMI GATC 2 cut(s) 820, 1249
BssNI GRCGYC 2 cut(s) 665, 728
BssT1I CCWWGG 4 cut(s) 762, 1055, 1503, 2061
Bst2UI CCWGG 2 cut(s) 2100, 2181
Bst4CI ACNGT 4 cut(s) 1356, 1689, 1801, 2203
Bst6I CTCTTC 2 cut(s) 351, 2223
BstACI GRCGYC 2 cut(s) 665, 728
BstAPI GCANNNNNTGC 2 cut(s) 148, 427
BstAUI TGTACA 1 cut(s) 1702
BstBI TTCGAA 1 cut(s) 1952
BstC8I GCNNGC 8 cut(s) 153, 273, 277, 627, 631, 901, 1089, 2214
BstDEI CTNAG 6 cut(s) 1114, 1149, 1218, 1317, 1662, 2312
BstDSI CCRYGG 2 cut(s) 762, 1055
BstH2I RGCGCY 3 cut(s) 668, 731, 2219
BstHHI GCGC 5 cut(s) 157, 396, 667, 730, 2218
BstKTI GATC 2 cut(s) 823, 1252
BstMAI GTCTC 5 cut(s) 164, 1307, 1678, 1790, 2209
BstMBI GATC 2 cut(s) 820, 1249
BstMWI GCNNNNNNNGC 6 cut(s) 117, 148, 315, 427, 883, 1078
BstNI CCWGG 2 cut(s) 2100, 2181
BstNSI RCATGY 3 cut(s) 155, 275, 629
BstSCI CCNGG 3 cut(s) 505, 2098, 2179
BstSFI CTRYAG 4 cut(s) 945, 1121, 2167, 2317
BstSLI GKGCMC 1 cut(s) 1598
BstV1I GCAGC 4 cut(s) 645, 1029, 2089, 2303
BstV2I GAAGAC 2 cut(s) 656, 719
BstXI CCANNNNNNTGG 2 cut(s) 283, 2036
BsuRI GGCC 4 cut(s) 2040, 2060, 2066, 2103
BtgI CCRYGG 2 cut(s) 762, 1055
BtrI CACGTC 2 cut(s) 174, 1107
BtsIMutI CAGTG 3 cut(s) 1264, 1899, 2199
BveI ACCTGC 2 cut(s) 270, 399
Cac8I GCNNGC 8 cut(s) 153, 273, 277, 627, 631, 901, 1089, 2214
CaiI CAGNNNCTG 1 cut(s) 1316
CciI TCATGA 1 cut(s) 331
CfoI GCGC 5 cut(s) 157, 396, 667, 730, 2218
Cfr10I RCCGGY 4 cut(s) 780, 839, 1709, 1769
Cfr13I GGNCC 5 cut(s) 905, 1988, 2026, 2039, 2183
CseI GACGC 1 cut(s) 1568
Csp6I GTAC 6 cut(s) 300, 1005, 1189, 1690, 1703, 1741
CspAI ACCGGT 2 cut(s) 839, 1709
CviQI GTAC 6 cut(s) 300, 1005, 1189, 1690, 1703, 1741
DdeI CTNAG 6 cut(s) 1114, 1149, 1218, 1317, 1662, 2312
DinI GGCGCC 2 cut(s) 666, 729
DpnI GATC 2 cut(s) 822, 1251
DpnII GATC 2 cut(s) 820, 1249
DraI TTTAAA 1 cut(s) 513
DraIII CACNNNGTG 1 cut(s) 1426
DrdI GACNNNNNNGTC 1 cut(s) 1804
DseDI GACNNNNNNGTC 1 cut(s) 1804
Eam1104I CTCTTC 2 cut(s) 351, 2223
EarI CTCTTC 2 cut(s) 351, 2223
EciI GGCGGA 3 cut(s) 21, 918, 1623
Eco130I CCWWGG 4 cut(s) 762, 1055, 1503, 2061
Eco47I GGWCC 4 cut(s) 905, 1988, 2026, 2183
Eco57I CTGAAG 1 cut(s) 857
EcoO109I RGGNCCY 1 cut(s) 2183
EcoRII CCWGG 2 cut(s) 2098, 2179
EcoT14I CCWWGG 4 cut(s) 762, 1055, 1503, 2061
EgeI GGCGCC 2 cut(s) 666, 729
EheI GGCGCC 2 cut(s) 666, 729
ErhI CCWWGG 4 cut(s) 762, 1055, 1503, 2061
Esp3I CGTCTC 1 cut(s) 164
FalI AAGNNNNNCTT 2 cut(s) 1847, 1879
FauI CCCGC 1 cut(s) 892
FauNDI CATATG 2 cut(s) 417, 1177
FblI GTMKAC 2 cut(s) 928, 1582
Fnu4HI GCNGC 6 cut(s) 634, 1018, 2078, 2177, 2196, 2317
Fsp4HI GCNGC 6 cut(s) 634, 1018, 2078, 2177, 2196, 2317
FspBI CTAG 7 cut(s) 225, 1008, 1163, 1434, 1529, 1917, 2213
GlaI GCGC 5 cut(s) 156, 395, 666, 729, 2217
GluI GCNGC 6 cut(s) 634, 1018, 2078, 2177, 2196, 2317
GsaI CCCAGC 1 cut(s) 2121
GsuI CTGGAG 2 cut(s) 191, 464
HaeII RGCGCY 3 cut(s) 668, 731, 2219
HaeIII GGCC 4 cut(s) 2040, 2060, 2066, 2103
HapII CCGG 7 cut(s) 233, 506, 781, 840, 1710, 1770, 2327
HgaI GACGC 1 cut(s) 1568
HhaI GCGC 5 cut(s) 157, 396, 667, 730, 2218
Hin1I GRCGYC 2 cut(s) 665, 728
Hin6I GCGC 5 cut(s) 155, 394, 665, 728, 2216
HinP1I GCGC 5 cut(s) 155, 394, 665, 728, 2216
HincII GTYRAC 1 cut(s) 1583
HindII GTYRAC 1 cut(s) 1583
HindIII AAGCTT 2 cut(s) 365, 1111
HpaII CCGG 7 cut(s) 233, 506, 781, 840, 1710, 1770, 2327
Hpy166II GTNNAC 4 cut(s) 929, 995, 1583, 1947
Hpy188I TCNGA 8 cut(s) 196, 469, 691, 1221, 1518, 1665, 2015, 2209
Hpy8I GTNNAC 4 cut(s) 929, 995, 1583, 1947
Hpy99I CGWCG 1 cut(s) 1584
HpyCH4III ACNGT 4 cut(s) 1356, 1689, 1801, 2203
HpyCH4IV ACGT 4 cut(s) 15, 173, 1106, 1145
HpyCH4V TGCA 7 cut(s) 151, 421, 430, 1199, 1878, 1922, 2319
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 148, 315, 427, 883, 1078
HpyF3I CTNAG 6 cut(s) 1114, 1149, 1218, 1317, 1662, 2312
HpySE526I ACGT 4 cut(s) 15, 173, 1106, 1145
Hsp92I GRCGYC 2 cut(s) 665, 728
HspAI GCGC 5 cut(s) 155, 394, 665, 728, 2216
KasI GGCGCC 2 cut(s) 664, 727
Kpn2I TCCGGA 2 cut(s) 232, 2326
Kzo9I GATC 2 cut(s) 820, 1249
LmnI GCTCC 5 cut(s) 268, 348, 622, 2159, 2303
Lsp1109I GCAGC 4 cut(s) 645, 1029, 2089, 2303
LweI GCATC 2 cut(s) 187, 460
MaeI CTAG 7 cut(s) 225, 1008, 1163, 1434, 1529, 1917, 2213
MaeII ACGT 4 cut(s) 15, 173, 1106, 1145
MaeIII GTNAC 3 cut(s) 386, 1075, 1487
MalI GATC 2 cut(s) 822, 1251
MboI GATC 2 cut(s) 820, 1249
MhlI GDGCHC 1 cut(s) 1598
MluCI AATT 5 cut(s) 182, 684, 741, 1519, 1844
Mly113I GGCGCC 2 cut(s) 665, 728
MlyI GAGTC 5 cut(s) 19, 220, 493, 1280, 1654
MroI TCCGGA 2 cut(s) 232, 2326
MseI TTAA 3 cut(s) 512, 1616, 1646
MslI CAYNNNNRTG 2 cut(s) 165, 840
MspA1I CMGCKG 2 cut(s) 899, 2316
MspI CCGG 7 cut(s) 233, 506, 781, 840, 1710, 1770, 2327
MspR9I CCNGG 3 cut(s) 507, 2100, 2181
Mva1269I GAATGC 2 cut(s) 1188, 2009
MvaI CCWGG 2 cut(s) 2100, 2181
MwoI GCNNNNNNNGC 6 cut(s) 117, 148, 315, 427, 883, 1078
NarI GGCGCC 2 cut(s) 665, 728
NciI CCSGG 1 cut(s) 507
NcoI CCATGG 2 cut(s) 762, 1055
NdeI CATATG 2 cut(s) 417, 1177
NdeII GATC 2 cut(s) 820, 1249
NheI GCTAGC 1 cut(s) 2212
NlaIV GGNNCC 5 cut(s) 666, 729, 844, 1230, 2185
NmuCI GTSAC 3 cut(s) 386, 1075, 1487
NspI RCATGY 3 cut(s) 155, 275, 629
NspV TTCGAA 1 cut(s) 1952
OliI CACNNNNGTG 1 cut(s) 840
PaeI GCATGC 3 cut(s) 155, 275, 629
PagI TCATGA 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 399
PctI GAATGC 2 cut(s) 1188, 2009
PfeI GAWTC 9 cut(s) 794, 830, 1222, 1262, 1444, 1550, 1724, 1764, 1837
PflMI CCANNNNNTGG 1 cut(s) 746
PinAI ACCGGT 2 cut(s) 839, 1709
PkrI GCNGC 6 cut(s) 635, 1019, 2079, 2178, 2197, 2318
PleI GAGTC 5 cut(s) 19, 219, 492, 1279, 1654
PluTI GGCGCC 2 cut(s) 668, 731
PpsI GAGTC 5 cut(s) 19, 219, 492, 1279, 1654
PpuMI RGGWCCY 1 cut(s) 2183
Psp5II RGGWCCY 1 cut(s) 2183
Psp6I CCWGG 2 cut(s) 2098, 2179
PspFI CCCAGC 1 cut(s) 2117
PspGI CCWGG 2 cut(s) 2098, 2179
PspN4I GGNNCC 5 cut(s) 666, 729, 844, 1230, 2185
PspPI GGNCC 5 cut(s) 905, 1988, 2026, 2039, 2183
PspPPI RGGWCCY 1 cut(s) 2183
PstI CTGCAG 1 cut(s) 2321
PstNI CAGNNNCTG 1 cut(s) 1316
PvuII CAGCTG 1 cut(s) 2316
RsaI GTAC 6 cut(s) 301, 1006, 1190, 1691, 1704, 1742
RsaNI GTAC 6 cut(s) 300, 1005, 1189, 1690, 1703, 1741
RseI CAYNNNNRTG 2 cut(s) 165, 840
SalI GTCGAC 1 cut(s) 1581
SaqAI TTAA 3 cut(s) 512, 1616, 1646
SatI GCNGC 6 cut(s) 634, 1018, 2078, 2177, 2196, 2317
Sau3AI GATC 2 cut(s) 820, 1249
Sau96I GGNCC 5 cut(s) 905, 1988, 2026, 2039, 2183
ScaI AGTACT 1 cut(s) 1691
SchI GAGTC 5 cut(s) 19, 220, 493, 1280, 1654
ScrFI CCNGG 3 cut(s) 507, 2100, 2181
SduI GDGCHC 1 cut(s) 1598
SfaNI GCATC 2 cut(s) 187, 460
SfcI CTRYAG 4 cut(s) 945, 1121, 2167, 2317
SfoI GGCGCC 2 cut(s) 666, 729
SfuI TTCGAA 1 cut(s) 1952
SgrAI CRCCGGYG 1 cut(s) 839
SinI GGWCC 4 cut(s) 905, 1988, 2026, 2183
SmiMI CAYNNNNRTG 2 cut(s) 165, 840
SmlI CTYRAG 4 cut(s) 881, 1067, 1730, 2261
SmoI CTYRAG 4 cut(s) 881, 1067, 1730, 2261
SpeI ACTAGT 1 cut(s) 1433
SphI GCATGC 3 cut(s) 155, 275, 629
Sse9I AATT 5 cut(s) 182, 684, 741, 1519, 1844
SsiI CCGC 9 cut(s) 6, 899, 903, 1388, 1634, 1819, 2177, 2196, 2294
SspDI GGCGCC 2 cut(s) 664, 727
SspMI CTAG 7 cut(s) 225, 1008, 1163, 1434, 1529, 1917, 2213
StyD4I CCNGG 3 cut(s) 505, 2098, 2179
StyI CCWWGG 4 cut(s) 762, 1055, 1503, 2061
TaaI ACNGT 4 cut(s) 1356, 1689, 1801, 2203
TaiI ACGT 4 cut(s) 18, 176, 1109, 1148
TaqI TCGA 7 cut(s) 819, 939, 1101, 1582, 1794, 1952, 2226
TaqII GACCGA 1 cut(s) 1794
TasI AATT 5 cut(s) 182, 684, 741, 1519, 1844
TatI WGTACW 3 cut(s) 1188, 1689, 1702
TauI GCSGC 2 cut(s) 2179, 2198
TfiI GAWTC 9 cut(s) 794, 830, 1222, 1262, 1444, 1550, 1724, 1764, 1837
Tru1I TTAA 3 cut(s) 512, 1616, 1646
Tru9I TTAA 3 cut(s) 512, 1616, 1646
TscAI CASTG 3 cut(s) 1264, 1899, 2206
TseFI GTSAC 3 cut(s) 386, 1075, 1487
TseI GCWGC 4 cut(s) 633, 1017, 2077, 2316
Tsp45I GTSAC 3 cut(s) 386, 1075, 1487
TspGWI ACGGA 2 cut(s) 787, 1242
TspRI CASTG 3 cut(s) 1264, 1899, 2206
Van91I CCANNNNNTGG 1 cut(s) 746
VpaK11BI GGWCC 4 cut(s) 905, 1988, 2026, 2183
XapI RAATTY 2 cut(s) 1519, 1844
XbaI TCTAGA 1 cut(s) 224
XceI RCATGY 3 cut(s) 155, 275, 629
XmiI GTMKAC 2 cut(s) 928, 1582
XspI CTAG 7 cut(s) 225, 1008, 1163, 1434, 1529, 1917, 2213
ZrmI AGTACT 1 cut(s) 1691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.