Prupe.5G196500_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Forward (+)
15915727 .. 15918862
3136 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G196500.1

Sequence Viewer

Length: 1974 bp
ATGGATAACAAGGAACAGTGCATGATGAAACAGGTAACAAAACATGAAATTTTAAAGGGATATTTTATGAGTTTTGGAAACTTTCCTCATATCACACACCCAACCAGGCATAACGAAACTTTCCTCATATCACACCCCCAACCATGCATAATAAAACTCCCCTCTACAGCGGCATCCCCAAACCCTAAATTCTTTGTGCCTCAATTTGCATTCTCAATAGCGAAGGCCCTATCATCTGGTATCATGGGGGATCCGCAAAAATCTCAACCTTCCGCCGCCGCCGCTGATCTCACCTCCAGCCAAGATGATCCCCAGTGGAAGTTACAGGATATGGAGGAATCTCTGGGCAATGTAATAGAGAAAACCCAAAAGTTCGAATTGCAAACATCAATACTGGAGCCACTTCGCGCCAGTAGTGGTATTCCCGTTCAACCCGGCAGTCCCCGGCCTACGATGTCTTCTGCCGCCTCTGAACTCACCACTTCTCAATACCGTGCCTTCACGAAGTTATTGGAGGTGCTTTCCGCCCAGCTTTCTGCACAGCTATCCGCCCAGCTATCCGCCCAGCTATCCGCCCAGCTCGATTCGCAGAAATCAATACTGGAGGAGCTTCGCCTTATACGCGCCAGTAATGCTATCAACTTTCAATCCGAAAGGAAGAAGACTCCAAATTTCACTGTTCCCGACCGTGAGCCCTTTAATCCTTACCCAAGCTTTTCTATGGTGGAGGATGCATCGACGGTAAATCAGGAGGAAGATAGATCTGTATATTTATTGATGTCTTATTATGATAGCCGATACACTGATTCAATCTATCAAGTTACATTCAAACATGGAGGAGTCACCCATGAACCCCCAGTAGTTGAACTTGACCAAGAGTTTTATGACGGTTTTTACATTCAGGGTGCCAGGATTTCCAACCGCTCCCAATTATACATCCTTCTACAAAACGGTTATAATGACCCTTTAAAGCAGGTGCCATCAGGATATAGTATTGACACGAAGAAGTGGTCATATCATTCATCTCTTCCTCCTAACATAACATCTAAACCACTAGCAACTCTTGTATCTGCGTATGACAAGCTTTACTATATTGCATCTCCAGTGTGCTTACCACCAATTCAGGAGCCCTCCTTTGAGAGATATGATCCTGCCCAAAACCTTTGGGAGCGAATGCCTTCTTTTCCATTTTATCATGATGATGGGATCCGTATGGAAATAATTGGTTATGCCGTTTGTTATGGCGTTATTTTATTTTCATTGTGGGACTCCGACCTAAATCCGAATGTCGTTGCTTTTCATGAGAGTATAAACCAATGGAGTCAAGTGACTTCTGCTTCTTATGCCCCATTTCGAGGGAGGGCCGTGGTTATAGGTGACACTATCTATGCCGTACATGCACTTATGGTGGAGCAGATTATAGCATTCTCCTTTAAGATGGACAAAGGTGAACATGGTTGCATTACATATTCCCTAAGCCCACTGTTTACATTGCGTGGCTTGGAAATCGTGTGTCCGCCAGTGCCGTTTTGTGAGCTTAAGACAGGGTATTTAGTTCATTTGGGTAACCATGACTTTTTTCATGTCATGACTGGCAGTCCCAATAGCGAACCACGTCCTGAAGTTCAATATCTTTGTATCACCACGTTTCAAATTGTTGTTGGAGAAGGAGAAAGACCCATGATCAAGACCATACAGTCAACTATTCATCCTGTGAATATCAAGGGCCGTGATTGGTTCTTCCTTGAGTTCTGCTTTACGCCTGAGTGCGGGGATCATGAACCTATAGAAGGGGACATTATGACTAGTATGAATCAGCCAAAAGAAGAAGAAATCACTCTGAATGAACATGAACCAACTCAGGATGAGAATGTTTTGACGTGGGAGGTGGCTCGTAGCGAGTTTCTTGCTCGCCGGTGTCAAAGAAAGAGGCCAAGAAAGAAGCCAAGCTGGAGTAACCGCCATGTAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

658

Amino Acids

74.51

Weight (kDa)

5.67

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 957
AarI CACCTGC 1 cut(s) 964
AasI GACNNNNNNGTC 1 cut(s) 1696
Acc36I ACCTGC 1 cut(s) 964
AccB1I GGYRCC 2 cut(s) 905, 976
AccBSI CCGCTC 1 cut(s) 924
AccII CGCG 2 cut(s) 408, 624
AclWI GGATC 7 cut(s) 245, 258, 302, 1142, 1201, 1214, 1782
AcsI RAATTY 3 cut(s) 48, 188, 670
AcuI CTGAAG 1 cut(s) 1641
AfaI GTAC 1 cut(s) 1395
AfiI CCNNNNNNNGG 3 cut(s) 1355, 1769, 1790
AflII CTTAAG 1 cut(s) 1538
AgsI TTSAA 7 cut(s) 431, 647, 810, 829, 866, 1628, 1652
AhdI GACNNNNNGTC 1 cut(s) 1596
AhlI ACTAGT 1 cut(s) 1805
AjiI CACGTC 2 cut(s) 1616, 1881
AjnI CCWGG 2 cut(s) 104, 908
AlwI GGATC 7 cut(s) 245, 258, 302, 1142, 1201, 1214, 1782
AoxI GGCC 5 cut(s) 225, 446, 1362, 1726, 1931
ApoI RAATTY 3 cut(s) 48, 188, 670
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
Asp700I GAANNNNTTC 1 cut(s) 1177
AspLEI GCGC 2 cut(s) 410, 626
AspS9I GGNCC 3 cut(s) 226, 1362, 1726
AsuC2I CCSGG 2 cut(s) 435, 445
AsuHPI GGTGA 6 cut(s) 283, 469, 835, 1388, 1460, 1633
AsuII TTCGAA 1 cut(s) 375
BaeI ACNNNNGTAYC 2 cut(s) 1050, 1083
BamHI GGATCC 2 cut(s) 250, 1206
BanI GGYRCC 2 cut(s) 905, 976
BanII GRGCYC 2 cut(s) 696, 1131
BbsI GAAGAC 2 cut(s) 450, 668
BccI CCATC 3 cut(s) 988, 1196, 1432
BceAI ACGGC 5 cut(s) 1217, 1349, 1376, 1510, 1713
BcgI CGANNNNNNTGC 2 cut(s) 1889, 1923
BciT130I CCWGG 2 cut(s) 106, 910
BclI TGATCA 1 cut(s) 1683
BcnI CCSGG 2 cut(s) 435, 445
BcuI ACTAGT 1 cut(s) 1805
BfaI CTAG 2 cut(s) 1055, 1806
BfmI CTRYAG 2 cut(s) 165, 1785
BfrI CTTAAG 1 cut(s) 1538
BfuAI ACCTGC 1 cut(s) 964
BglII AGATCT 1 cut(s) 761
BisI GCNGC 5 cut(s) 171, 276, 279, 282, 465
BlsI GCNGC 5 cut(s) 172, 277, 280, 283, 466
Bme1390I CCNGG 4 cut(s) 106, 435, 445, 910
BmeRI GACNNNNNGTC 1 cut(s) 1596
BmgBI CACGTC 2 cut(s) 1616, 1881
BmgT120I GGNCC 3 cut(s) 226, 1362, 1726
BmiI GGNNCC 6 cut(s) 252, 399, 907, 978, 1128, 1208
BmrFI CCNGG 4 cut(s) 106, 435, 445, 910
BmrI ACTGGG 2 cut(s) 307, 851
BmsI GCATC 4 cut(s) 182, 721, 743, 1106
BmuI ACTGGG 2 cut(s) 307, 851
BpiI GAAGAC 2 cut(s) 450, 668
BpmI CTGGAG 5 cut(s) 280, 416, 623, 1086, 1972
Bpu10I CCTNAGC 1 cut(s) 1475
Bpu14I TTCGAA 1 cut(s) 375
BpuEI CTTGAG 1 cut(s) 1766
BpuMI CCSGG 2 cut(s) 435, 445
BsaJI CCNNGG 2 cut(s) 443, 1365
Bsc4I CCNNNNNNNGG 3 cut(s) 1355, 1769, 1790
Bse118I RCCGGY 1 cut(s) 1914
Bse1I ACTGG 9 cut(s) 313, 399, 411, 606, 627, 857, 1103, 1520, 1597
Bse3DI GCAATG 2 cut(s) 355, 1490
BseBI CCWGG 2 cut(s) 106, 910
BseDI CCNNGG 2 cut(s) 443, 1365
BseGI GGATG 5 cut(s) 173, 736, 936, 1708, 1870
BseLI CCNNNNNNNGG 3 cut(s) 1355, 1769, 1790
BseMI GCAATG 2 cut(s) 355, 1490
BseMII CTCAG 2 cut(s) 1755, 1874
BseNI ACTGG 9 cut(s) 313, 399, 411, 606, 627, 857, 1103, 1520, 1597
BseRI GAGGAG 2 cut(s) 620, 852
BseYI CCCAGC 4 cut(s) 528, 552, 564, 576
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 2 cut(s) 408, 624
Bsh1285I CGRYCG 1 cut(s) 688
BshFI GGCC 5 cut(s) 227, 448, 1364, 1728, 1933
BshNI GGYRCC 2 cut(s) 905, 976
BsiEI CGRYCG 1 cut(s) 688
BsiSI CCGG 3 cut(s) 435, 445, 1915
BslFI GGGAC 4 cut(s) 426, 1280, 1584, 1808
BslI CCNNNNNNNGG 3 cut(s) 1355, 1769, 1790
BsmFI GGGAC 4 cut(s) 426, 1280, 1584, 1808
BsmI GAATGC 3 cut(s) 209, 1179, 1424
BsnI GGCC 5 cut(s) 227, 448, 1364, 1728, 1933
Bsp119I TTCGAA 1 cut(s) 375
Bsp1286I GDGCHC 2 cut(s) 696, 1131
Bsp143I GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
BspANI GGCC 5 cut(s) 227, 448, 1364, 1728, 1933
BspCNI CTCAG 2 cut(s) 1756, 1873
BspFNI CGCG 2 cut(s) 408, 624
BspHI TCATGA 4 cut(s) 1195, 1300, 1587, 1777
BspLI GGNNCC 6 cut(s) 252, 399, 907, 978, 1128, 1208
BspMI ACCTGC 1 cut(s) 964
BspPI GGATC 7 cut(s) 245, 258, 302, 1142, 1201, 1214, 1782
BspT104I TTCGAA 1 cut(s) 375
BspT107I GGYRCC 2 cut(s) 905, 976
BspTI CTTAAG 1 cut(s) 1538
BsrBI CCGCTC 1 cut(s) 924
BsrDI GCAATG 2 cut(s) 355, 1490
BsrFI RCCGGY 1 cut(s) 1914
BsrI ACTGG 9 cut(s) 313, 399, 411, 606, 627, 857, 1103, 1520, 1597
BssAI RCCGGY 1 cut(s) 1914
BssECI CCNNGG 2 cut(s) 443, 1365
BssMI GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
Bst2UI CCWGG 2 cut(s) 106, 910
Bst4CI ACNGT 9 cut(s) 18, 494, 679, 689, 742, 890, 953, 1485, 1698
Bst6I CTCTTC 1 cut(s) 1032
BstAFI CTTAAG 1 cut(s) 1538
BstBI TTCGAA 1 cut(s) 375
BstC8I GCNNGC 1 cut(s) 1912
BstDEI CTNAG 3 cut(s) 1475, 1764, 1860
BstDSI CCRYGG 1 cut(s) 1365
BstEII GGTNACC 1 cut(s) 1565
BstENI CCTNNNNNAGG 1 cut(s) 1788
BstF5I GGATG 5 cut(s) 173, 736, 936, 1708, 1870
BstFNI CGCG 2 cut(s) 408, 624
BstHHI GCGC 2 cut(s) 410, 626
BstKTI GATC 8 cut(s) 253, 289, 310, 764, 1150, 1209, 1686, 1777
BstMBI GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
BstMCI CGRYCG 1 cut(s) 688
BstMWI GCNNNNNNNGC 6 cut(s) 281, 586, 621, 632, 1343, 1397
BstNI CCWGG 2 cut(s) 106, 910
BstNSI RCATGY 1 cut(s) 1400
BstPI GGTNACC 1 cut(s) 1565
BstSCI CCNGG 4 cut(s) 104, 433, 443, 908
BstSFI CTRYAG 2 cut(s) 165, 1785
BstUI CGCG 2 cut(s) 408, 624
BstV2I GAAGAC 2 cut(s) 450, 668
BstX2I RGATCY 3 cut(s) 250, 761, 1206
BstYI RGATCY 3 cut(s) 250, 761, 1206
BsuRI GGCC 5 cut(s) 227, 448, 1364, 1728, 1933
BtgI CCRYGG 1 cut(s) 1365
BtrI CACGTC 2 cut(s) 1616, 1881
BtsCI GGATG 5 cut(s) 173, 736, 936, 1708, 1870
BtsIMutI CAGTG 7 cut(s) 23, 320, 675, 801, 1110, 1481, 1527
BveI ACCTGC 1 cut(s) 964
Cac8I GCNNGC 1 cut(s) 1912
CciI TCATGA 4 cut(s) 1195, 1300, 1587, 1777
CfoI GCGC 2 cut(s) 410, 626
Cfr10I RCCGGY 1 cut(s) 1914
Cfr13I GGNCC 3 cut(s) 226, 1362, 1726
Csp6I GTAC 1 cut(s) 1394
CviQI GTAC 1 cut(s) 1394
DdeI CTNAG 3 cut(s) 1475, 1764, 1860
DpnI GATC 8 cut(s) 252, 288, 309, 763, 1149, 1208, 1685, 1776
DpnII GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
DraI TTTAAA 2 cut(s) 54, 969
DrdI GACNNNNNNGTC 1 cut(s) 1696
DriI GACNNNNNGTC 1 cut(s) 1596
DseDI GACNNNNNNGTC 1 cut(s) 1696
Eam1104I CTCTTC 1 cut(s) 1032
Eam1105I GACNNNNNGTC 1 cut(s) 1596
EarI CTCTTC 1 cut(s) 1032
EciI GGCGGA 6 cut(s) 262, 514, 538, 550, 562, 1506
Eco24I GRGCYC 2 cut(s) 696, 1131
Eco57I CTGAAG 1 cut(s) 1641
Eco91I GGTNACC 1 cut(s) 1565
EcoNI CCTNNNNNAGG 1 cut(s) 1788
EcoO109I RGGNCCY 1 cut(s) 226
EcoO65I GGTNACC 1 cut(s) 1565
EcoRII CCWGG 2 cut(s) 104, 908
EcoT22I ATGCAT 2 cut(s) 149, 736
EcoT38I GRGCYC 2 cut(s) 696, 1131
FaqI GGGAC 4 cut(s) 426, 1280, 1584, 1808
FauI CCCGC 1 cut(s) 1763
FbaI TGATCA 1 cut(s) 1683
Fnu4HI GCNGC 5 cut(s) 171, 276, 279, 282, 465
FokI GGATG 5 cut(s) 160, 743, 923, 1695, 1877
FriOI GRGCYC 2 cut(s) 696, 1131
Fsp4HI GCNGC 5 cut(s) 171, 276, 279, 282, 465
FspBI CTAG 2 cut(s) 1055, 1806
GlaI GCGC 2 cut(s) 409, 625
GluI GCNGC 5 cut(s) 171, 276, 279, 282, 465
GsaI CCCAGC 4 cut(s) 532, 556, 568, 580
GsuI CTGGAG 5 cut(s) 280, 416, 623, 1086, 1972
HaeIII GGCC 5 cut(s) 227, 448, 1364, 1728, 1933
HapII CCGG 3 cut(s) 435, 445, 1915
HhaI GCGC 2 cut(s) 410, 626
Hin6I GCGC 2 cut(s) 408, 624
HinP1I GCGC 2 cut(s) 408, 624
HincII GTYRAC 1 cut(s) 1701
HindII GTYRAC 1 cut(s) 1701
HindIII AAGCTT 2 cut(s) 712, 1082
HinfI GANTC 8 cut(s) 338, 584, 664, 806, 840, 1268, 1321, 1813
HpaII CCGG 3 cut(s) 435, 445, 1915
HphI GGTGA 6 cut(s) 283, 469, 835, 1388, 1460, 1633
Hpy166II GTNNAC 3 cut(s) 1451, 1488, 1701
Hpy188I TCNGA 5 cut(s) 472, 652, 1273, 1284, 1842
Hpy8I GTNNAC 3 cut(s) 1451, 1488, 1701
Hpy99I CGWCG 1 cut(s) 742
HpyAV CCTTC 7 cut(s) 217, 279, 508, 950, 1188, 1661, 1784
HpyCH4III ACNGT 9 cut(s) 18, 494, 679, 689, 742, 890, 953, 1485, 1698
HpyCH4IV ACGT 3 cut(s) 1615, 1646, 1880
HpyCH4V TGCA 9 cut(s) 21, 147, 209, 382, 539, 734, 1097, 1400, 1461
HpyF10VI GCNNNNNNNGC 6 cut(s) 281, 586, 621, 632, 1343, 1397
HpyF3I CTNAG 3 cut(s) 1475, 1764, 1860
HpySE526I ACGT 3 cut(s) 1615, 1646, 1880
HspAI GCGC 2 cut(s) 408, 624
Ksp22I TGATCA 1 cut(s) 1683
Kzo9I GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
LmnI GCTCC 6 cut(s) 397, 607, 929, 1126, 1168, 1411
LweI GCATC 4 cut(s) 182, 721, 743, 1106
MaeI CTAG 2 cut(s) 1055, 1806
MaeII ACGT 3 cut(s) 1615, 1646, 1880
MaeIII GTNAC 8 cut(s) 34, 321, 820, 841, 1327, 1376, 1565, 1955
MalI GATC 8 cut(s) 252, 288, 309, 763, 1149, 1208, 1685, 1776
MbiI CCGCTC 1 cut(s) 924
MboI GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
MboII GAAGA 9 cut(s) 450, 670, 673, 767, 1015, 1019, 1732, 1838, 1841
MflI RGATCY 3 cut(s) 250, 761, 1206
MhlI GDGCHC 2 cut(s) 696, 1131
MluCI AATT 9 cut(s) 48, 188, 203, 377, 670, 929, 1119, 1221, 1653
MlyI GAGTC 4 cut(s) 658, 849, 1262, 1330
MmeI TCCRAC 3 cut(s) 942, 1296, 1642
Mph1103I ATGCAT 2 cut(s) 149, 736
MroXI GAANNNNTTC 1 cut(s) 1177
MseI TTAA 5 cut(s) 53, 699, 968, 1434, 1539
MslI CAYNNNNRTG 1 cut(s) 1200
MspA1I CMGCKG 2 cut(s) 170, 284
MspCI CTTAAG 1 cut(s) 1538
MspI CCGG 3 cut(s) 435, 445, 1915
MspR9I CCNGG 4 cut(s) 106, 435, 445, 910
Mva1269I GAATGC 3 cut(s) 209, 1179, 1424
MvaI CCWGG 2 cut(s) 106, 910
MvnI CGCG 2 cut(s) 408, 624
MwoI GCNNNNNNNGC 6 cut(s) 281, 586, 621, 632, 1343, 1397
NciI CCSGG 2 cut(s) 435, 445
NdeII GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
NlaIV GGNNCC 6 cut(s) 252, 399, 907, 978, 1128, 1208
NmuCI GTSAC 3 cut(s) 841, 1327, 1376
NsiI ATGCAT 2 cut(s) 149, 736
NspI RCATGY 1 cut(s) 1400
NspV TTCGAA 1 cut(s) 375
PagI TCATGA 4 cut(s) 1195, 1300, 1587, 1777
PaqCI CACCTGC 1 cut(s) 964
PctI GAATGC 3 cut(s) 209, 1179, 1424
PdmI GAANNNNTTC 1 cut(s) 1177
PfeI GAWTC 4 cut(s) 338, 584, 806, 1813
PkrI GCNGC 5 cut(s) 172, 277, 280, 283, 466
PleI GAGTC 4 cut(s) 658, 848, 1262, 1329
PpsI GAGTC 4 cut(s) 658, 848, 1262, 1329
PsiI TTATAA 1 cut(s) 957
Psp6I CCWGG 2 cut(s) 104, 908
PspEI GGTNACC 1 cut(s) 1565
PspFI CCCAGC 4 cut(s) 528, 552, 564, 576
PspGI CCWGG 2 cut(s) 104, 908
PspN4I GGNNCC 6 cut(s) 252, 399, 907, 978, 1128, 1208
PspPI GGNCC 3 cut(s) 226, 1362, 1726
PsuI RGATCY 3 cut(s) 250, 761, 1206
RsaI GTAC 1 cut(s) 1395
RsaNI GTAC 1 cut(s) 1394
RseI CAYNNNNRTG 1 cut(s) 1200
SaqAI TTAA 5 cut(s) 53, 699, 968, 1434, 1539
SatI GCNGC 5 cut(s) 171, 276, 279, 282, 465
Sau3AI GATC 8 cut(s) 250, 286, 307, 761, 1147, 1206, 1683, 1774
Sau96I GGNCC 3 cut(s) 226, 1362, 1726
SchI GAGTC 4 cut(s) 658, 849, 1262, 1330
ScrFI CCNGG 4 cut(s) 106, 435, 445, 910
SduI GDGCHC 2 cut(s) 696, 1131
SfaNI GCATC 4 cut(s) 182, 721, 743, 1106
SfcI CTRYAG 2 cut(s) 165, 1785
SfuI TTCGAA 1 cut(s) 375
SgrAI CRCCGGYG 1 cut(s) 1914
SmiMI CAYNNNNRTG 1 cut(s) 1200
SmlI CTYRAG 2 cut(s) 1538, 1745
SmoI CTYRAG 2 cut(s) 1538, 1745
SpeI ACTAGT 1 cut(s) 1805
Sse9I AATT 9 cut(s) 48, 188, 203, 377, 670, 929, 1119, 1221, 1653
SspMI CTAG 2 cut(s) 1055, 1806
StyD4I CCNGG 4 cut(s) 104, 433, 443, 908
TaaI ACNGT 9 cut(s) 18, 494, 679, 689, 742, 890, 953, 1485, 1698
TaiI ACGT 3 cut(s) 1618, 1649, 1883
TaqI TCGA 4 cut(s) 375, 582, 737, 1354
TasI AATT 9 cut(s) 48, 188, 203, 377, 670, 929, 1119, 1221, 1653
TauI GCSGC 5 cut(s) 173, 278, 281, 284, 467
TfiI GAWTC 4 cut(s) 338, 584, 806, 1813
Tru1I TTAA 5 cut(s) 53, 699, 968, 1434, 1539
Tru9I TTAA 5 cut(s) 53, 699, 968, 1434, 1539
TscAI CASTG 7 cut(s) 23, 320, 682, 808, 1110, 1488, 1527
TseFI GTSAC 3 cut(s) 841, 1327, 1376
Tsp45I GTSAC 3 cut(s) 841, 1327, 1376
TspGWI ACGGA 1 cut(s) 1199
TspRI CASTG 7 cut(s) 23, 320, 682, 808, 1110, 1488, 1527
Vha464I CTTAAG 1 cut(s) 1538
XagI CCTNNNNNAGG 1 cut(s) 1788
XapI RAATTY 3 cut(s) 48, 188, 670
XceI RCATGY 1 cut(s) 1400
XmnI GAANNNNTTC 1 cut(s) 1177
XspI CTAG 2 cut(s) 1055, 1806
Zsp2I ATGCAT 2 cut(s) 149, 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.