Rmu_sc0003964.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003964.1
OG0000150
Physical Location & Seq
Reverse (-)
10835 .. 16366
5532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003964.1_g000004.1.cds

Sequence Viewer

Length: 1878 bp
atgcatggatttttcaccctccccattctccgttgttcttatccgtgttcttgttctacgctctggttcttggttccatctcggcagccatggttctttcttgagatgtgtctctatggtggagggaatgatgttgttttgagggatcttctccccttggatgttgcggtttcatatagtttgtgttttgggattcaattggcatcggacaatcagtacgggtactctctgccctgtgcggctacagtcccaaatcctagccagggatcctcatctttcgccgagtttgactcagttatgtctatgaagggggagtcttcatcaaagcagggagaagaaatatctgtttttgtattggtgactacctttgagggtgacttctatggtgcattatttgaagtaaaactggatcgaagaggtcaagtcatgggtggatgtggagcaactcagcccccactacttgaccctgtagcacgtttctttgaaaaggatagtaatattcctgaattttataccttcggtggtgtttgcatatgcaacaagttatatctattgctcagtagtggttcagacattggtccatgcaatgatgatgatgagatcaccactcctaagaagcctgactctttgaatggatacattttcgacattaagactagggcactcgttaagttcagccctcccaaagcatctaagtcatctggaactgttatacatgcgtacgagaaaatttattttcttttagatccattttgcttcccatgtgaaccagaagattctttcgagcgctatgatccgatcaatgactcttgggaatcactgaagccttttccgtattctaaggattgggccacaacaaagataaccggtcacgccgtttatgatgggtccattttgttttctatatatggccacaggcaaccggcagtgatggcttatcatgaaaatagagattattgggagccagtcaaagttgaggacttttgttggagtggaaaggccttggttgtaggcaatactatgtatgccttatccttgcaacctggggaggttatagcattctctatcataacggatcaaactgatgaaggtcatgctgccttttctcttggcaagccatcgctgttgtcaggcatggagattaagttcccaccgaatccttcaaggagatcacaatacttggctcatttgggtggcctggaattttgtcttgtccagagtggtttcacatacaaaggcaatgatcggcaacctctttctatcaccacatttcgaattgaggagggaaacaatatcaagatcttacattcagcagttcgtgatgtggatattgagggctttagtggtttccttgttagcttctgcttcacacatcctgacccttacctgaattttggactcctggacgggtccaaagccgtgtttgagagcagatgggatctgagacccaactctgctagggttttgaagaacgccgaccccgtaacagagtattgtgtctttgcaccctctccatctatggactcttctgcgtttctcccttctaacactctttgctgtcactggtggacaagatgtgatgtacagggatggtggtggtacgggttcactggaaatgaactagaatgcttgttgcggctttggggatctggaaagtaccgcctggtggtggcctactttagttgcagcagtgtgccgaccacagaaagacccattattacttggtcgagtagcacttgggctgctggagatcaagattggctcgggtttgtcaacttcgccagtggtcgagtcctcttttcttttgcttttacatttattggattccttttgagaaagacatggttagatcgaagcctcccgaagtcttcttggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

625

Amino Acids

70.08

Weight (kDa)

5.17

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 167, 239, 1636, 1660
AclWI GGATC 9 cut(s) 153, 261, 274, 417, 740, 788, 1083, 1446, 1654
AcoI YGGCCR 1 cut(s) 910
AcsI RAATTY 4 cut(s) 506, 729, 1202, 1390
AcuI CTGAAG 1 cut(s) 842
AfaI GTAC 6 cut(s) 218, 224, 722, 1584, 1601, 1658
AfeI AGCGCT 1 cut(s) 788
AfiI CCNNNNNNNGG 3 cut(s) 263, 1666, 1669
AgeI ACCGGT 1 cut(s) 866
AgsI TTSAA 6 cut(s) 197, 398, 485, 631, 1164, 1468
AjnI CCWGG 5 cut(s) 261, 1042, 1197, 1401, 1662
AloI GAACNNNNNNTCC 2 cut(s) 1130, 1162
AluBI AGCT 1 cut(s) 1359
AluI AGCT 1 cut(s) 1359
Alw26I GTCTC 2 cut(s) 116, 1438
AlwI GGATC 9 cut(s) 153, 261, 274, 417, 740, 788, 1083, 1446, 1654
Ama87I CYCGRG 1 cut(s) 1763
Aor51HI AGCGCT 1 cut(s) 788
AoxI GGCC 5 cut(s) 849, 910, 999, 1195, 1671
ApeKI GCWGC 4 cut(s) 85, 1097, 1686, 1742
ApoI RAATTY 4 cut(s) 506, 729, 1202, 1390
AsiGI ACCGGT 1 cut(s) 866
AspLEI GCGC 1 cut(s) 789
AspS9I GGNCC 4 cut(s) 578, 849, 888, 1410
AsuHPI GGTGA 5 cut(s) 7, 370, 386, 595, 1255
AsuII TTCGAA 1 cut(s) 1273
AvaI CYCGRG 1 cut(s) 1763
AvaII GGWCC 3 cut(s) 578, 888, 1410
BaeGI GKGCMC 1 cut(s) 664
BalI TGGCCA 1 cut(s) 912
BamHI GGATCC 1 cut(s) 266
BbsI GAAGAC 2 cut(s) 309, 1860
BbvI GCAGC 4 cut(s) 97, 1084, 1698, 1729
BccI CCATC 7 cut(s) 85, 878, 925, 1126, 1428, 1522, 1584
BceAI ACGGC 2 cut(s) 860, 1403
BciT130I CCWGG 5 cut(s) 263, 1044, 1199, 1403, 1664
BciVI GTATCC 1 cut(s) 629
BcoDI GTCTC 2 cut(s) 116, 1438
BfaI CTAG 4 cut(s) 258, 657, 1458, 1622
BfmI CTRYAG 2 cut(s) 243, 468
BfoI RGCGCY 1 cut(s) 790
BfuI GTATCC 1 cut(s) 629
BglII AGATCT 1 cut(s) 1299
BisI GCNGC 6 cut(s) 86, 240, 1098, 1637, 1687, 1743
BlsI GCNGC 6 cut(s) 87, 241, 1099, 1638, 1688, 1744
Bme1390I CCNGG 5 cut(s) 263, 1044, 1199, 1403, 1664
Bme18I GGWCC 3 cut(s) 578, 888, 1410
BmeT110I CYCGRG 1 cut(s) 1763
BmgT120I GGNCC 4 cut(s) 578, 849, 888, 1410
BmiI GGNNCC 5 cut(s) 75, 268, 889, 963, 1411
BmrFI CCNGG 5 cut(s) 263, 1044, 1199, 1403, 1664
BmsI GCATC 2 cut(s) 212, 698
BoxI GACNNNNGTC 1 cut(s) 576
BpiI GAAGAC 2 cut(s) 309, 1860
BplI GAGNNNNNCTC 2 cut(s) 275, 307
BpmI CTGGAG 1 cut(s) 1767
Bpu14I TTCGAA 1 cut(s) 1273
BpuEI CTTGAG 1 cut(s) 122
BsaBI GATNNNNATC 1 cut(s) 271
BsaI GGTCTC 1 cut(s) 1438
BsaJI CCNNGG 5 cut(s) 89, 156, 262, 1002, 1043
BsaWI WCCGGW 1 cut(s) 866
BsaXI ACNNNNNCTCC 2 cut(s) 1130, 1160
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 1666, 1669
Bse118I RCCGGY 2 cut(s) 866, 922
Bse1I ACTGG 5 cut(s) 411, 965, 1568, 1615, 1782
Bse3DI GCAATG 2 cut(s) 592, 1246
Bse8I GATNNNNATC 1 cut(s) 271
BseBI CCWGG 5 cut(s) 263, 1044, 1199, 1403, 1664
BseDI CCNNGG 5 cut(s) 89, 156, 262, 1002, 1043
BseGI GGATG 4 cut(s) 166, 440, 1372, 1595
BseJI GATNNNNATC 1 cut(s) 271
BseLI CCNNNNNNNGG 3 cut(s) 263, 1666, 1669
BseMI GCAATG 2 cut(s) 592, 1246
BseMII CTCAG 4 cut(s) 306, 461, 571, 1433
BseNI ACTGG 5 cut(s) 411, 965, 1568, 1615, 1782
BseRI GAGGAG 1 cut(s) 1295
BseSI GKGCMC 1 cut(s) 664
BseXI GCAGC 4 cut(s) 97, 1084, 1698, 1729
BshFI GGCC 5 cut(s) 851, 912, 1001, 1197, 1673
BshTI ACCGGT 1 cut(s) 866
BsiHKCI CYCGRG 1 cut(s) 1763
BsiSI CCGG 2 cut(s) 867, 923
BsiWI CGTACG 1 cut(s) 720
BslFI GGGAC 1 cut(s) 233
BslI CCNNNNNNNGG 3 cut(s) 263, 1666, 1669
BsmAI GTCTC 2 cut(s) 116, 1438
BsmFI GGGAC 1 cut(s) 233
BsmI GAATGC 2 cut(s) 1058, 1631
BsnI GGCC 5 cut(s) 851, 912, 1001, 1197, 1673
Bso31I GGTCTC 1 cut(s) 1438
BsoBI CYCGRG 1 cut(s) 1763
Bsp119I TTCGAA 1 cut(s) 1273
Bsp1286I GDGCHC 1 cut(s) 664
Bsp1407I TGTACA 1 cut(s) 1582
Bsp19I CCATGG 1 cut(s) 89
BspACI CCGC 4 cut(s) 167, 239, 1636, 1660
BspANI GGCC 5 cut(s) 851, 912, 1001, 1197, 1673
BspCNI CTCAG 4 cut(s) 305, 460, 570, 1434
BspHI TCATGA 1 cut(s) 940
BspLI GGNNCC 5 cut(s) 75, 268, 889, 963, 1411
BspPI GGATC 9 cut(s) 153, 261, 274, 417, 740, 788, 1083, 1446, 1654
BspT104I TTCGAA 1 cut(s) 1273
BspTNI GGTCTC 1 cut(s) 1438
BsrDI GCAATG 2 cut(s) 592, 1246
BsrFI RCCGGY 2 cut(s) 866, 922
BsrGI TGTACA 1 cut(s) 1582
BsrI ACTGG 5 cut(s) 411, 965, 1568, 1615, 1782
BssAI RCCGGY 2 cut(s) 866, 922
BssECI CCNNGG 5 cut(s) 89, 156, 262, 1002, 1043
BssT1I CCWWGG 3 cut(s) 89, 156, 1002
Bst2UI CCWGG 5 cut(s) 263, 1044, 1199, 1403, 1664
Bst4CI ACNGT 2 cut(s) 247, 709
Bst6I CTCTTC 2 cut(s) 409, 1531
BstAUI TGTACA 1 cut(s) 1582
BstBI TTCGAA 1 cut(s) 1273
BstC8I GCNNGC 1 cut(s) 1115
BstDEI CTNAG 7 cut(s) 292, 447, 557, 612, 693, 840, 1442
BstDSI CCRYGG 1 cut(s) 89
BstF5I GGATG 4 cut(s) 166, 440, 1372, 1595
BstH2I RGCGCY 1 cut(s) 790
BstHHI GCGC 1 cut(s) 789
BstMAI GTCTC 2 cut(s) 116, 1438
BstMWI GCNNNNNNNGC 1 cut(s) 932
BstNI CCWGG 5 cut(s) 263, 1044, 1199, 1403, 1664
BstNSI RCATGY 1 cut(s) 719
BstPAI GACNNNNGTC 1 cut(s) 576
BstSCI CCNGG 5 cut(s) 261, 1042, 1197, 1401, 1662
BstSFI CTRYAG 2 cut(s) 243, 468
BstSLI GKGCMC 1 cut(s) 664
BstV1I GCAGC 4 cut(s) 97, 1084, 1698, 1729
BstV2I GAAGAC 2 cut(s) 309, 1860
BstX2I RGATCY 6 cut(s) 145, 266, 745, 1299, 1438, 1646
BstYI RGATCY 6 cut(s) 145, 266, 745, 1299, 1438, 1646
BsuI GTATCC 1 cut(s) 629
BsuRI GGCC 5 cut(s) 851, 912, 1001, 1197, 1673
BtgI CCRYGG 1 cut(s) 89
BtgZI GCGATG 1 cut(s) 1104
BtsCI GGATG 4 cut(s) 166, 440, 1372, 1595
BtsI GCAGTG 2 cut(s) 933, 1696
BtsIMutI CAGTG 6 cut(s) 818, 933, 1561, 1608, 1696, 1789
Cac8I GCNNGC 1 cut(s) 1115
CciI TCATGA 1 cut(s) 940
CfoI GCGC 1 cut(s) 789
Cfr10I RCCGGY 2 cut(s) 866, 922
Cfr13I GGNCC 4 cut(s) 578, 849, 888, 1410
Csp6I GTAC 6 cut(s) 217, 223, 721, 1583, 1600, 1657
CspAI ACCGGT 1 cut(s) 866
CviQI GTAC 6 cut(s) 217, 223, 721, 1583, 1600, 1657
DdeI CTNAG 7 cut(s) 292, 447, 557, 612, 693, 840, 1442
EaeI YGGCCR 1 cut(s) 910
Eam1104I CTCTTC 2 cut(s) 409, 1531
EarI CTCTTC 2 cut(s) 409, 1531
Eco130I CCWWGG 3 cut(s) 89, 156, 1002
Eco147I AGGCCT 1 cut(s) 1001
Eco31I GGTCTC 1 cut(s) 1438
Eco47I GGWCC 3 cut(s) 578, 888, 1410
Eco47III AGCGCT 1 cut(s) 788
Eco57I CTGAAG 1 cut(s) 842
Eco88I CYCGRG 1 cut(s) 1763
EcoRII CCWGG 5 cut(s) 261, 1042, 1197, 1401, 1662
EcoT14I CCWWGG 3 cut(s) 89, 156, 1002
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 89, 156, 1002
FaqI GGGAC 1 cut(s) 233
FauNDI CATATG 1 cut(s) 533
Fnu4HI GCNGC 6 cut(s) 86, 240, 1098, 1637, 1687, 1743
FokI GGATG 4 cut(s) 173, 447, 1359, 1602
Fsp4HI GCNGC 6 cut(s) 86, 240, 1098, 1637, 1687, 1743
FspBI CTAG 4 cut(s) 258, 657, 1458, 1622
GlaI GCGC 1 cut(s) 788
GluI GCNGC 6 cut(s) 86, 240, 1098, 1637, 1687, 1743
GsuI CTGGAG 1 cut(s) 1767
HaeII RGCGCY 1 cut(s) 790
HaeIII GGCC 5 cut(s) 851, 912, 1001, 1197, 1673
HapII CCGG 2 cut(s) 867, 923
HhaI GCGC 1 cut(s) 789
Hin6I GCGC 1 cut(s) 787
HinP1I GCGC 1 cut(s) 787
HincII GTYRAC 1 cut(s) 1774
HindII GTYRAC 1 cut(s) 1774
HpaII CCGG 2 cut(s) 867, 923
HphI GGTGA 5 cut(s) 7, 370, 386, 595, 1255
Hpy166II GTNNAC 4 cut(s) 767, 1569, 1608, 1774
Hpy188I TCNGA 4 cut(s) 208, 571, 798, 1443
Hpy8I GTNNAC 4 cut(s) 767, 1569, 1608, 1774
HpyAV CCTTC 5 cut(s) 301, 526, 1082, 1170, 1551
HpyCH4III ACNGT 2 cut(s) 247, 709
HpyCH4IV ACGT 1 cut(s) 475
HpyCH4V TGCA 8 cut(s) 4, 389, 531, 537, 585, 1039, 1505, 1686
HpyF10VI GCNNNNNNNGC 1 cut(s) 932
HpyF3I CTNAG 7 cut(s) 292, 447, 557, 612, 693, 840, 1442
HpySE526I ACGT 1 cut(s) 475
HspAI GCGC 1 cut(s) 787
LmnI GCTCC 2 cut(s) 440, 961
Lsp1109I GCAGC 4 cut(s) 97, 1084, 1698, 1729
LweI GCATC 2 cut(s) 212, 698
MaeI CTAG 4 cut(s) 258, 657, 1458, 1622
MaeII ACGT 1 cut(s) 475
MaeIII GTNAC 5 cut(s) 358, 374, 869, 1483, 1559
MboII GAAGA 8 cut(s) 140, 309, 347, 426, 785, 1480, 1518, 1860
MfeI CAATTG 1 cut(s) 197
MflI RGATCY 6 cut(s) 145, 266, 745, 1299, 1438, 1646
MhlI GDGCHC 1 cut(s) 664
MlsI TGGCCA 1 cut(s) 912
MluCI AATT 6 cut(s) 197, 506, 729, 1202, 1275, 1390
MluNI TGGCCA 1 cut(s) 912
MlyI GAGTC 7 cut(s) 284, 323, 617, 800, 1392, 1517, 1800
MmeI TCCRAC 1 cut(s) 968
Mox20I TGGCCA 1 cut(s) 912
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 912
MseI TTAA 3 cut(s) 651, 669, 1143
MslI CAYNNNNRTG 1 cut(s) 1191
Msp20I TGGCCA 1 cut(s) 912
MspI CCGG 2 cut(s) 867, 923
MspR9I CCNGG 5 cut(s) 263, 1044, 1199, 1403, 1664
MunI CAATTG 1 cut(s) 197
Mva1269I GAATGC 2 cut(s) 1058, 1631
MvaI CCWGG 5 cut(s) 263, 1044, 1199, 1403, 1664
MwoI GCNNNNNNNGC 1 cut(s) 932
NcoI CCATGG 1 cut(s) 89
NdeI CATATG 1 cut(s) 533
NlaIV GGNNCC 5 cut(s) 75, 268, 889, 963, 1411
NmeAIII GCCGAG 2 cut(s) 61, 307
NmuCI GTSAC 4 cut(s) 358, 374, 869, 1559
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 719
NspV TTCGAA 1 cut(s) 1273
PagI TCATGA 1 cut(s) 940
PceI AGGCCT 1 cut(s) 1001
PcsI WCGNNNNNNNCGW 1 cut(s) 1479
PctI GAATGC 2 cut(s) 1058, 1631
PfeI GAWTC 5 cut(s) 193, 776, 815, 1156, 1824
Pfl23II CGTACG 1 cut(s) 720
PfoI TCCNGGA 1 cut(s) 1401
PinAI ACCGGT 1 cut(s) 866
PkrI GCNGC 6 cut(s) 87, 241, 1099, 1638, 1688, 1744
PleI GAGTC 7 cut(s) 284, 322, 617, 800, 1392, 1517, 1799
PpsI GAGTC 7 cut(s) 284, 322, 617, 800, 1392, 1517, 1799
PshAI GACNNNNGTC 1 cut(s) 576
Psp6I CCWGG 5 cut(s) 261, 1042, 1197, 1401, 1662
PspGI CCWGG 5 cut(s) 261, 1042, 1197, 1401, 1662
PspLI CGTACG 1 cut(s) 720
PspN4I GGNNCC 5 cut(s) 75, 268, 889, 963, 1411
PspPI GGNCC 4 cut(s) 578, 849, 888, 1410
PsuI RGATCY 6 cut(s) 145, 266, 745, 1299, 1438, 1646
RsaI GTAC 6 cut(s) 218, 224, 722, 1584, 1601, 1658
RsaNI GTAC 6 cut(s) 217, 223, 721, 1583, 1600, 1657
RseI CAYNNNNRTG 1 cut(s) 1191
SaqAI TTAA 3 cut(s) 651, 669, 1143
SatI GCNGC 6 cut(s) 86, 240, 1098, 1637, 1687, 1743
Sau96I GGNCC 4 cut(s) 578, 849, 888, 1410
SchI GAGTC 7 cut(s) 284, 323, 617, 800, 1392, 1517, 1800
ScrFI CCNGG 5 cut(s) 263, 1044, 1199, 1403, 1664
SduI GDGCHC 1 cut(s) 664
SfaNI GCATC 2 cut(s) 212, 698
SfcI CTRYAG 2 cut(s) 243, 468
SfuI TTCGAA 1 cut(s) 1273
SinI GGWCC 3 cut(s) 578, 888, 1410
SmiMI CAYNNNNRTG 1 cut(s) 1191
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
Sse9I AATT 6 cut(s) 197, 506, 729, 1202, 1275, 1390
SseBI AGGCCT 1 cut(s) 1001
SsiI CCGC 4 cut(s) 167, 239, 1636, 1660
SspI AATATT 1 cut(s) 499
SspMI CTAG 4 cut(s) 258, 657, 1458, 1622
StuI AGGCCT 1 cut(s) 1001
StyD4I CCNGG 5 cut(s) 261, 1042, 1197, 1401, 1662
StyI CCWWGG 3 cut(s) 89, 156, 1002
TaaI ACNGT 2 cut(s) 247, 709
TaiI ACGT 1 cut(s) 478
TaqI TCGA 7 cut(s) 412, 645, 783, 1273, 1727, 1789, 1852
TasI AATT 6 cut(s) 197, 506, 729, 1202, 1275, 1390
TatI WGTACW 1 cut(s) 1582
TauI GCSGC 2 cut(s) 242, 1639
TfiI GAWTC 5 cut(s) 193, 776, 815, 1156, 1824
Tru1I TTAA 3 cut(s) 651, 669, 1143
Tru9I TTAA 3 cut(s) 651, 669, 1143
TscAI CASTG 6 cut(s) 825, 933, 1568, 1615, 1696, 1789
TseFI GTSAC 4 cut(s) 358, 374, 869, 1559
TseI GCWGC 4 cut(s) 85, 1097, 1686, 1742
Tsp45I GTSAC 4 cut(s) 358, 374, 869, 1559
TspDTI ATGAA 6 cut(s) 162, 309, 320, 957, 1101, 1632
TspGWI ACGGA 4 cut(s) 20, 33, 822, 1088
TspRI CASTG 6 cut(s) 825, 933, 1568, 1615, 1696, 1789
VpaK11BI GGWCC 3 cut(s) 578, 888, 1410
XapI RAATTY 4 cut(s) 506, 729, 1202, 1390
XceI RCATGY 1 cut(s) 719
XspI CTAG 4 cut(s) 258, 657, 1458, 1622
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.