Rw1G037950

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000150
Physical Location & Seq
Reverse (-)
65532084 .. 65537682
5599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G037950.1

Sequence Viewer

Length: 1950 bp
ATGGCCGGAGATGACGTTTTGCCGCCTCAAATCCACATGAAGGGAGGGGAGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGGGAACAACGGGCGACATGAGCCGTCCCCGTCCCGATTGTCATGATATGTCACCGCCTTGTGAAGTCTGTCACCAGCGATTTCCCGACAACATCACCCTCCAAATACATAGGGAGAATGTCCATGTGCTTCATATTTGTGAGATATGTGGATTATCGTTTTACTCTGATACTCTCCTCCAAACACATAAGCAGTGTGTGCATACGCTTCATACGTGTGAGATATGTGGAGTATCGTTTCGCTCTGATGCTCAACTCCAGAGTCATAGGAAATCCAAACATCCGGATTTAAAGAAGAAAAAGATGATGAAGAAGAAGAAGAAGAAGAAGAGGCAGAAGAAGAAGAAGAAGAATGAGGAGGAGGAGGAGGAGGAGAAGGCGAAGGCGGAGGGGGAGCATGCCAGCAGCTTCCCCATAGAGAAGACGATGAACAAGGCGCCCTCACCCTCATCCTCAATTTCTGGCGAGAGCTTCCCCATTGAGAAGATGATGAACAAGGCACCCTCACCCTCGATTTCTGGCGAGAGCTTTCCCATGGAGAAGGTGGACCAGGCAGAATCTATACTTATTATGGTGAAGTTTGACATGGATGATTCATTTTCTGGCGCAATATACGAAATCAAACTTGACCAACTTCAGCCACTTGAGCATGGTAAATCTGTGGGCGGATTTAACACTGACCCTTCAACTCTACCAATGCTCAAACCTGTAGCAGAGTTATTTGGTAAGGGCTGGAAGACGGAGGAGCTCTTTTTATTTGATTGTGCTAGAATTGGCAGCCTCTCCAAGTTATATGTTTTGGTAAATCAAATCCCATGCCCTTATCTGAAGCCTGTCACTCCCGAGTATGCATTTGCCTTCGACAAAAGCTTAGTTTCAGAACTGATTTCTCCACCAAAGACAACCAAGCAGTATTGTCTTGTTATATCGGCATATGGGATGTATTATCTTGCACAGCCATTGTGCTTTCCTCAGATCCAAGAACCGTCATTTGAGCGGTATGATCCGGCCAGTGATTCATGGGAGTCATTGCCTCCTTTCCCAGATTATTCTCTAGATCAGGCACAGACCGAGATAACCGGTTATGCCGTTTGTTATGGATATATACTATTGTCCATGCAAACTGAGAAGAAATATGAAGCGGTGGCTTTTCATATTCATAGCAGAACATGGCACAAGGTGAAGACTAGCCCAGAGAATCCTTATTATTATCCCTTCTATGGGAGGGCAGTGGTTTTAGGTAGTACTATCTATGCCTTGGCGCATAATCTTGATTTGGTTCTGGTCTTCTCTTTCTGGTGGGATTCAGACAAGGATGGTGACATTGTTAAGCGGCGACATTTTCTGGGCACCCCATTGTCTCTGTTAATAACAGCCAAGTGTCATCCGCCGCGCAGGTTACTAGGGGATAGAACTCAAAATTTGGTTCATTTAGGGGGGCGATACTTTTGTGTTGTGCAAACTGGTCAGAACATTGATTCTTCTGAGTATCAGTATATGTGTGCGACGACCTTCAGAATTGCCGGTGATGGGCAAGAAATGCATATCAAGACTGTTCGCTCATCCGTTTTTCGAGTCGCGATCGAAGGGAATGATGAATTTGAAGTTCAGTTCAGCTTCACACCAGATTGCAATGACATTGAACCAGTGGAAGAACAGTACTGTGTGTCTAGTGCATTGGTTGAAAGGGAAAGTGCGTGGACTTCGGATGTCAAAGAAGACTTCTTTTCCTTCCCAACTGGTCCTAAACTGGGATTAGAGGCATTTAGAGCCAAGAAAGAAGACGAAAAAAAAGTGTTCATCTCCACTACTTCACCTGAGACTCCTCTCCTTTCCAAAGGTTCAAAAAAGAAGAAAAAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

649

Amino Acids

73.8

Weight (kDa)

8.42

Isoelectric Point (pI)

57.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 361 - 534 2.5e-07 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1470
AccB1I GGYRCC 3 cut(s) 520, 583, 1433
AccBSI CCGCTC 1 cut(s) 1081
AccII CGCG 2 cut(s) 1477, 1664
AccIII TCCGGA 1 cut(s) 367
AciI CCGC 9 cut(s) 23, 140, 470, 750, 1081, 1226, 1417, 1472, 1475
AclWI GGATC 2 cut(s) 1054, 1082
AcoI YGGCCR 2 cut(s) 3, 1092
AcsI RAATTY 2 cut(s) 1504, 1682
AcuI CTGAAG 3 cut(s) 704, 932, 1582
AcyI GRCGYC 1 cut(s) 521
AdeI CACNNNGTG 1 cut(s) 1264
AfaI GTAC 2 cut(s) 1330, 1745
AfiI CCNNNNNNNGG 5 cut(s) 40, 1304, 1305, 1614, 1835
AflIII ACRYGT 1 cut(s) 299
AgeI ACCGGT 1 cut(s) 1163
AgsI TTSAA 5 cut(s) 771, 1688, 1727, 1769, 1929
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 6 cut(s) 492, 555, 612, 832, 954, 1701
AluI AGCT 6 cut(s) 492, 555, 612, 832, 954, 1701
Alw21I GWGCWC 1 cut(s) 834
Alw26I GTCTC 2 cut(s) 1449, 1898
AlwI GGATC 2 cut(s) 1054, 1082
Ama87I CYCGRG 1 cut(s) 926
Aor13HI TCCGGA 1 cut(s) 367
AoxI GGCC 2 cut(s) 3, 1092
ApeKI GCWGC 2 cut(s) 489, 861
ApoI RAATTY 2 cut(s) 1504, 1682
AsiGI ACCGGT 1 cut(s) 1163
AspLEI GCGC 4 cut(s) 523, 692, 1348, 1479
AspS9I GGNCC 2 cut(s) 631, 1826
AvaI CYCGRG 1 cut(s) 926
AvaII GGWCC 2 cut(s) 631, 1826
BaeGI GKGCMC 1 cut(s) 1436
BaeI ACNNNNGTAYC 2 cut(s) 1519, 1552
BanI GGYRCC 3 cut(s) 520, 583, 1433
BanII GRGCYC 1 cut(s) 834
BbsI GAAGAC 6 cut(s) 512, 827, 1274, 1363, 1809, 1872
Bbv12I GWGCWC 1 cut(s) 834
BbvI GCAGC 2 cut(s) 501, 873
BccI CCATC 2 cut(s) 1394, 1607
BceAI ACGGC 2 cut(s) 93, 1157
BciT130I CCWGG 1 cut(s) 635
BcoDI GTCTC 2 cut(s) 1449, 1898
BfaI CTAG 5 cut(s) 852, 1139, 1272, 1487, 1755
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 1470
BisI GCNGC 5 cut(s) 23, 490, 862, 1418, 1475
BlsI GCNGC 5 cut(s) 24, 491, 863, 1419, 1476
BmcAI AGTACT 2 cut(s) 1330, 1745
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 2 cut(s) 631, 1826
BmeT110I CYCGRG 1 cut(s) 926
BmgT120I GGNCC 2 cut(s) 631, 1826
BmiI GGNNCC 3 cut(s) 522, 585, 1435
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 1844
BmsI GCATC 1 cut(s) 322
BmuI ACTGGG 1 cut(s) 1844
BpiI GAAGAC 6 cut(s) 512, 827, 1274, 1363, 1809, 1872
BpmI CTGGAG 1 cut(s) 326
BpuEI CTTGAG 1 cut(s) 749
BsaAI YACGTR 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 521
BsaJI CCNNGG 2 cut(s) 618, 1341
BsaWI WCCGGW 2 cut(s) 367, 1163
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 1304, 1305, 1614, 1835
Bse118I RCCGGY 2 cut(s) 1163, 1607
Bse1I ACTGG 5 cut(s) 1095, 1552, 1730, 1828, 1839
Bse3DI GCAATG 2 cut(s) 1112, 1723
BseAI TCCGGA 1 cut(s) 367
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 2 cut(s) 618, 1341
BseGI GGATG 8 cut(s) 364, 533, 679, 1029, 1405, 1468, 1646, 1798
BseLI CCNNNNNNNGG 5 cut(s) 40, 1304, 1305, 1614, 1835
BseMI GCAATG 2 cut(s) 1112, 1723
BseMII CTCAG 4 cut(s) 1070, 1200, 1560, 1893
BseNI ACTGG 5 cut(s) 1095, 1552, 1730, 1828, 1839
BseRI GAGGAG 9 cut(s) 251, 455, 458, 461, 464, 467, 470, 842, 1899
BseSI GKGCMC 1 cut(s) 1436
BseXI GCAGC 2 cut(s) 501, 873
Bsh1236I CGCG 2 cut(s) 1477, 1664
Bsh1285I CGRYCG 1 cut(s) 1668
BshFI GGCC 2 cut(s) 5, 1094
BshNI GGYRCC 3 cut(s) 520, 583, 1433
BshTI ACCGGT 1 cut(s) 1163
BsiEI CGRYCG 1 cut(s) 1668
BsiHKAI GWGCWC 1 cut(s) 834
BsiHKCI CYCGRG 1 cut(s) 926
BsiSI CCGG 5 cut(s) 6, 368, 1091, 1164, 1608
BslFI GGGAC 2 cut(s) 96, 102
BslI CCNNNNNNNGG 5 cut(s) 40, 1304, 1305, 1614, 1835
BsmAI GTCTC 2 cut(s) 1449, 1898
BsmFI GGGAC 2 cut(s) 96, 102
BsnI GGCC 2 cut(s) 5, 1094
BsoBI CYCGRG 1 cut(s) 926
Bsp1286I GDGCHC 2 cut(s) 834, 1436
Bsp13I TCCGGA 1 cut(s) 367
Bsp143I GATC 4 cut(s) 1059, 1087, 1141, 1665
Bsp19I CCATGG 1 cut(s) 618
Bsp68I TCGCGA 1 cut(s) 1664
BspACI CCGC 9 cut(s) 23, 140, 470, 750, 1081, 1226, 1417, 1472, 1475
BspANI GGCC 2 cut(s) 5, 1094
BspCNI CTCAG 4 cut(s) 1069, 1201, 1561, 1894
BspEI TCCGGA 1 cut(s) 367
BspFNI CGCG 2 cut(s) 1477, 1664
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 3 cut(s) 522, 585, 1435
BspMI ACCTGC 1 cut(s) 1470
BspPI GGATC 2 cut(s) 1054, 1082
BspT107I GGYRCC 3 cut(s) 520, 583, 1433
BsrBI CCGCTC 1 cut(s) 1081
BsrDI GCAATG 2 cut(s) 1112, 1723
BsrFI RCCGGY 2 cut(s) 1163, 1607
BsrI ACTGG 5 cut(s) 1095, 1552, 1730, 1828, 1839
BssAI RCCGGY 2 cut(s) 1163, 1607
BssECI CCNNGG 2 cut(s) 618, 1341
BssMI GATC 4 cut(s) 1059, 1087, 1141, 1665
BssNI GRCGYC 1 cut(s) 521
BssT1I CCWWGG 2 cut(s) 618, 1341
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 4 cut(s) 1071, 1639, 1743, 1748
Bst6I CTCTTC 1 cut(s) 407
BstACI GRCGYC 1 cut(s) 521
BstAPI GCANNNNNTGC 2 cut(s) 283, 1624
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 2 cut(s) 483, 487
BstDEI CTNAG 5 cut(s) 955, 1056, 1209, 1569, 1902
BstDSI CCRYGG 1 cut(s) 618
BstF5I GGATG 8 cut(s) 364, 533, 679, 1029, 1405, 1468, 1646, 1798
BstFNI CGCG 2 cut(s) 1477, 1664
BstH2I RGCGCY 1 cut(s) 524
BstHHI GCGC 4 cut(s) 523, 692, 1348, 1479
BstKTI GATC 4 cut(s) 1062, 1090, 1144, 1668
BstMAI GTCTC 2 cut(s) 1449, 1898
BstMBI GATC 4 cut(s) 1059, 1087, 1141, 1665
BstMCI CGRYCG 1 cut(s) 1668
BstMWI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1624, 1853
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 1 cut(s) 485
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 1436
BstUI CGCG 2 cut(s) 1477, 1664
BstV1I GCAGC 2 cut(s) 501, 873
BstV2I GAAGAC 6 cut(s) 512, 827, 1274, 1363, 1809, 1872
BstX2I RGATCY 1 cut(s) 1059
BstYI RGATCY 1 cut(s) 1059
BsuRI GGCC 2 cut(s) 5, 1094
BtgI CCRYGG 1 cut(s) 618
BtsCI GGATG 8 cut(s) 364, 533, 679, 1029, 1405, 1468, 1646, 1798
BtsI GCAGTG 2 cut(s) 284, 1320
BtsIMutI CAGTG 5 cut(s) 284, 759, 1102, 1320, 1737
BtuMI TCGCGA 1 cut(s) 1664
BveI ACCTGC 1 cut(s) 1470
Cac8I GCNNGC 2 cut(s) 483, 487
CciI TCATGA 1 cut(s) 127
CfoI GCGC 4 cut(s) 523, 692, 1348, 1479
Cfr10I RCCGGY 2 cut(s) 1163, 1607
Cfr13I GGNCC 2 cut(s) 631, 1826
Csp6I GTAC 2 cut(s) 1329, 1744
CspAI ACCGGT 1 cut(s) 1163
CviQI GTAC 2 cut(s) 1329, 1744
DdeI CTNAG 5 cut(s) 955, 1056, 1209, 1569, 1902
DinI GGCGCC 1 cut(s) 522
DpnI GATC 4 cut(s) 1061, 1089, 1143, 1667
DpnII GATC 4 cut(s) 1059, 1087, 1141, 1665
DraI TTTAAA 1 cut(s) 375
DraIII CACNNNGTG 1 cut(s) 1264
EaeI YGGCCR 2 cut(s) 3, 1092
Eam1104I CTCTTC 1 cut(s) 407
EarI CTCTTC 1 cut(s) 407
EciI GGCGGA 3 cut(s) 485, 765, 1461
Ecl136II GAGCTC 1 cut(s) 832
Eco130I CCWWGG 2 cut(s) 618, 1341
Eco24I GRGCYC 1 cut(s) 834
Eco47I GGWCC 2 cut(s) 631, 1826
Eco53kI GAGCTC 1 cut(s) 832
Eco57I CTGAAG 3 cut(s) 704, 932, 1582
Eco88I CYCGRG 1 cut(s) 926
EcoICRI GAGCTC 1 cut(s) 832
EcoRII CCWGG 1 cut(s) 633
EcoT14I CCWWGG 2 cut(s) 618, 1341
EcoT22I ATGCAT 2 cut(s) 937, 1629
EcoT38I GRGCYC 1 cut(s) 834
EgeI GGCGCC 1 cut(s) 522
EheI GGCGCC 1 cut(s) 522
ErhI CCWWGG 2 cut(s) 618, 1341
FaqI GGGAC 2 cut(s) 96, 102
FauNDI CATATG 1 cut(s) 1018
Fnu4HI GCNGC 5 cut(s) 23, 490, 862, 1418, 1475
FokI GGATG 8 cut(s) 351, 520, 686, 1036, 1412, 1455, 1633, 1805
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 5 cut(s) 23, 490, 862, 1418, 1475
FspBI CTAG 5 cut(s) 852, 1139, 1272, 1487, 1755
GlaI GCGC 4 cut(s) 522, 691, 1347, 1478
GluI GCNGC 5 cut(s) 23, 490, 862, 1418, 1475
GsuI CTGGAG 1 cut(s) 326
HaeII RGCGCY 1 cut(s) 524
HaeIII GGCC 2 cut(s) 5, 1094
HapII CCGG 5 cut(s) 6, 368, 1091, 1164, 1608
HhaI GCGC 4 cut(s) 523, 692, 1348, 1479
Hin1I GRCGYC 1 cut(s) 521
Hin6I GCGC 4 cut(s) 521, 690, 1346, 1477
HinP1I GCGC 4 cut(s) 521, 690, 1346, 1477
HindIII AAGCTT 1 cut(s) 952
HpaII CCGG 5 cut(s) 6, 368, 1091, 1164, 1608
Hpy166II GTNNAC 2 cut(s) 631, 1785
Hpy8I GTNNAC 2 cut(s) 631, 1785
Hpy99I CGWCG 1 cut(s) 1594
HpyCH4III ACNGT 4 cut(s) 1071, 1639, 1743, 1748
HpyCH4IV ACGT 2 cut(s) 15, 299
HpyCH4V TGCA 8 cut(s) 286, 935, 1037, 1204, 1543, 1627, 1716, 1760
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1624, 1853
HpyF3I CTNAG 5 cut(s) 955, 1056, 1209, 1569, 1902
HpySE526I ACGT 2 cut(s) 15, 299
Hsp92I GRCGYC 1 cut(s) 521
HspAI GCGC 4 cut(s) 521, 690, 1346, 1477
KasI GGCGCC 1 cut(s) 520
Kpn2I TCCGGA 1 cut(s) 367
Kzo9I GATC 4 cut(s) 1059, 1087, 1141, 1665
LmnI GCTCC 2 cut(s) 478, 829
Lsp1109I GCAGC 2 cut(s) 501, 873
LweI GCATC 1 cut(s) 322
MaeI CTAG 5 cut(s) 852, 1139, 1272, 1487, 1755
MaeII ACGT 2 cut(s) 15, 299
MaeIII GTNAC 5 cut(s) 135, 155, 919, 1403, 1482
MalI GATC 4 cut(s) 1061, 1089, 1143, 1667
MbiI CCGCTC 1 cut(s) 1081
MboI GATC 4 cut(s) 1059, 1087, 1141, 1665
MflI RGATCY 1 cut(s) 1059
MhlI GDGCHC 2 cut(s) 834, 1436
MluCI AATT 5 cut(s) 540, 855, 1504, 1602, 1682
Mly113I GGCGCC 1 cut(s) 521
MlyI GAGTC 4 cut(s) 355, 1118, 1668, 1900
Mph1103I ATGCAT 2 cut(s) 937, 1629
MroI TCCGGA 1 cut(s) 367
MseI TTAA 4 cut(s) 374, 756, 1413, 1451
MslI CAYNNNNRTG 2 cut(s) 222, 300
MspI CCGG 5 cut(s) 6, 368, 1091, 1164, 1608
MspR9I CCNGG 1 cut(s) 635
MvaI CCWGG 1 cut(s) 635
MvnI CGCG 2 cut(s) 1477, 1664
MwoI GCNNNNNNNGC 5 cut(s) 105, 283, 730, 1624, 1853
NarI GGCGCC 1 cut(s) 521
NcoI CCATGG 1 cut(s) 618
NdeI CATATG 1 cut(s) 1018
NdeII GATC 4 cut(s) 1059, 1087, 1141, 1665
NlaIV GGNNCC 3 cut(s) 522, 585, 1435
NmuCI GTSAC 4 cut(s) 135, 155, 919, 1403
NruI TCGCGA 1 cut(s) 1664
NsiI ATGCAT 2 cut(s) 937, 1629
NspI RCATGY 1 cut(s) 485
PaeI GCATGC 1 cut(s) 485
PagI TCATGA 1 cut(s) 127
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PfeI GAWTC 6 cut(s) 641, 677, 1100, 1282, 1388, 1562
PinAI ACCGGT 1 cut(s) 1163
PkrI GCNGC 5 cut(s) 24, 491, 863, 1419, 1476
Ple19I CGATCG 1 cut(s) 1668
PleI GAGTC 4 cut(s) 354, 1117, 1667, 1900
PluTI GGCGCC 1 cut(s) 524
PpsI GAGTC 4 cut(s) 354, 1117, 1667, 1900
Ppu21I YACGTR 1 cut(s) 300
Psp124BI GAGCTC 1 cut(s) 834
Psp6I CCWGG 1 cut(s) 633
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 3 cut(s) 522, 585, 1435
PspPI GGNCC 2 cut(s) 631, 1826
PsuI RGATCY 1 cut(s) 1059
PvuI CGATCG 1 cut(s) 1668
RruI TCGCGA 1 cut(s) 1664
RsaI GTAC 2 cut(s) 1330, 1745
RsaNI GTAC 2 cut(s) 1329, 1744
RseI CAYNNNNRTG 2 cut(s) 222, 300
SacI GAGCTC 1 cut(s) 834
SaqAI TTAA 4 cut(s) 374, 756, 1413, 1451
SatI GCNGC 5 cut(s) 23, 490, 862, 1418, 1475
Sau3AI GATC 4 cut(s) 1059, 1087, 1141, 1665
Sau96I GGNCC 2 cut(s) 631, 1826
ScaI AGTACT 2 cut(s) 1330, 1745
SchI GAGTC 4 cut(s) 355, 1118, 1668, 1900
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 2 cut(s) 834, 1436
SfaNI GCATC 1 cut(s) 322
SfcI CTRYAG 1 cut(s) 792
SfoI GGCGCC 1 cut(s) 522
SinI GGWCC 2 cut(s) 631, 1826
SmiMI CAYNNNNRTG 2 cut(s) 222, 300
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
SphI GCATGC 1 cut(s) 485
Sse9I AATT 5 cut(s) 540, 855, 1504, 1602, 1682
SsiI CCGC 9 cut(s) 23, 140, 470, 750, 1081, 1226, 1417, 1472, 1475
SspDI GGCGCC 1 cut(s) 520
SspMI CTAG 5 cut(s) 852, 1139, 1272, 1487, 1755
SstI GAGCTC 1 cut(s) 834
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 2 cut(s) 618, 1341
TaaI ACNGT 4 cut(s) 1071, 1639, 1743, 1748
TaiI ACGT 2 cut(s) 18, 302
TaqI TCGA 4 cut(s) 596, 945, 1657, 1668
TaqII GACCGA 1 cut(s) 1169
TasI AATT 5 cut(s) 540, 855, 1504, 1602, 1682
TatI WGTACW 2 cut(s) 1328, 1743
TauI GCSGC 3 cut(s) 25, 1420, 1477
TfiI GAWTC 6 cut(s) 641, 677, 1100, 1282, 1388, 1562
Tru1I TTAA 4 cut(s) 374, 756, 1413, 1451
Tru9I TTAA 4 cut(s) 374, 756, 1413, 1451
TscAI CASTG 5 cut(s) 284, 766, 1102, 1320, 1737
TseFI GTSAC 4 cut(s) 135, 155, 919, 1403
TseI GCWGC 2 cut(s) 489, 861
Tsp45I GTSAC 4 cut(s) 135, 155, 919, 1403
TspGWI ACGGA 2 cut(s) 839, 1639
TspRI CASTG 5 cut(s) 284, 766, 1102, 1320, 1737
VpaK11BI GGWCC 2 cut(s) 631, 1826
XapI RAATTY 2 cut(s) 1504, 1682
XbaI TCTAGA 1 cut(s) 1138
XceI RCATGY 1 cut(s) 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 625
XspI CTAG 5 cut(s) 852, 1139, 1272, 1487, 1755
ZrmI AGTACT 2 cut(s) 1330, 1745
Zsp2I ATGCAT 2 cut(s) 937, 1629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.