RLG00000003364

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000150
Physical Location & Seq
Forward (+)
47615700 .. 47618203
2504 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003364

Sequence Viewer

Length: 1641 bp
ATGTCTATGAAGGGGGAGTCTTCATCAAAGCAGGGAGAAGAAATATCTGTTTTTGTATTGGTGACTACCTTTGAGGGTGACTTCTATGGTGCATTATTTGAAGTAAAACTGGATCGAAGAGGTCAAGTCATGGGTGGATGTGGAGCAACTCAACCCCCCCTACTTGACCCTAGTTCAGACATTGGTCCATGCAATGATGATGATGAGATCACCACTCCTAAGAAGCCTGACTCTTTGAATGGATACATTTTCGACATTAAGACTAGGGCACTCATTAAGTTCAGCCCTCCCAAAGCATCCAAGTCATCTGGAACTGTTATACATGTGTACGAGAAAATTTATTTTCTTTTAGATCCATTTTGCTTCCCATGTGAACCAGAAGATTCTTTCGAGCGCTATGATCCTATCAATGACTCTTGGGAATCACTGAAGCCTTTTCCGTGTTCTAAGGATTGGGCCACAACAAGGATAACCGGTTACGCCGTTTATGATGGGTCCATTTTGTTTTCTATATATGGCCGCAGGCAACCGGCAGTGATGGCTTATCATGAAAATAGAGATTATTGGGAGCCAGTCAAAGTTGAGGACTTTTGTTGGAGTGGAAAGGCCTTGGTTGTAGGCAATACTATGTATGCCTTATCCTTGCAACCTGGGGAGGTTATAGCATTCTCTGTCATAACGGATCAAACTGATAAAGGTTATGCTGCCTTTTCTCTTGGCAAGCCATCGCTGTTGTCAGGCATGGAGATTAAGTTCCCACCGAATCCTTCAAGGAGATCACAATACTTGGCTCATTTGGGTGGCCTGGAATTTTGTCTTGTCCAGAGTGGTTTCACATACAATGGCAATTATCGGCAACCTCTTTCTATCACCACATTTCGAATTGAGGAAGGAAACAATATCAAGATCTTACATTCAGCAGTTCATGATATGGATATTGAGGGCTTTAGTGGTTTCCTTGTTAGCTTATGCTTCACTCACTCTGCGGAAGGAGTGGAGCTTGCGGGCCATGAAGAAGGTGAAGGTTGTCGGTCTCGACAGAGTCATTCCTCTAATCATCACGGTGATGAACTTATCTCCCAAGCTTCGACTTTCTCGGGTTCTCAGCCGTGTTTGAGAGCAGATGGGATCTGGTCAGTTTTAATCCTTCAATCCAACATGGGGTTGTGGGACTTTCTATTCATTGATTTTACATTTTTGAGACCCAACTCTGCTAGGGTTTTGAAGAACGCCGACCCCGTAACAGAGTTTGTGTTTTTGCACCCTCTCCAGCTATGGACTCTTCTGCGTTTCTCTCTACTAACACTCTTTGCTGTCACTGGCGGACAAGATGTGGTCTGCCTGGTGGCTGATCTGGTGTTGGCATTTGATGGAGATTGGTCGGGATGGTGGTGGTACTGGTTCACTGGAAATGAACTAGAATGCTTGTTACGGCTTTGGGGATCTGGAAAGTACCGCCTGGTGGTGGCCTACTTTAGTTGCAGCGGTGTGCCGACAACGGAGAGACCCATTATTACTTGGTCGGGTGGCACTTGGGCTGCTGGAGATCAAGATTGGCTCGGGTTTGTCAACTTCGCCGGTGGTCGAGTCCTCTTTTCTTTTGCTTTTACATTTATTGGATTCCTTTTGAGAAAGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

547

Amino Acids

61.04

Weight (kDa)

5.09

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 81 - 275 1.6e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 6 cut(s) 520, 986, 1004, 1323, 1456, 1485
AclWI GGATC 6 cut(s) 120, 347, 395, 690, 1136, 1450
AcoI YGGCCR 1 cut(s) 517
AcsI RAATTY 2 cut(s) 336, 809
AcuI CTGAAG 1 cut(s) 449
AfaI GTAC 3 cut(s) 329, 1397, 1454
AfeI AGCGCT 1 cut(s) 395
AfiI CCNNNNNNNGG 4 cut(s) 465, 1161, 1462, 1465
AflIII ACRYGT 1 cut(s) 322
AgeI ACCGGT 1 cut(s) 473
AgsI TTSAA 5 cut(s) 101, 238, 771, 1151, 1225
AjnI CCWGG 4 cut(s) 649, 804, 1341, 1458
AloI GAACNNNNNNTCC 2 cut(s) 737, 769
AluBI AGCT 4 cut(s) 966, 1000, 1085, 1273
AluI AGCT 4 cut(s) 966, 1000, 1085, 1273
Alw26I GTCTC 3 cut(s) 1038, 1195, 1498
AlwI GGATC 6 cut(s) 120, 347, 395, 690, 1136, 1450
Ama87I CYCGRG 2 cut(s) 1096, 1559
Aor51HI AGCGCT 1 cut(s) 395
AoxI GGCC 6 cut(s) 456, 517, 606, 802, 1006, 1467
ApeKI GCWGC 3 cut(s) 704, 1482, 1538
ApoI RAATTY 2 cut(s) 336, 809
AsiGI ACCGGT 1 cut(s) 473
AspLEI GCGC 1 cut(s) 396
AspS9I GGNCC 4 cut(s) 185, 456, 495, 1006
AsuHPI GGTGA 6 cut(s) 73, 89, 202, 862, 1031, 1076
AsuII TTCGAA 1 cut(s) 880
AvaI CYCGRG 2 cut(s) 1096, 1559
AvaII GGWCC 2 cut(s) 185, 495
BaeGI GKGCMC 1 cut(s) 271
BbsI GAAGAC 1 cut(s) 12
BbvI GCAGC 3 cut(s) 691, 1494, 1525
BccI CCATC 6 cut(s) 485, 532, 733, 1118, 1364, 1380
BceAI ACGGC 3 cut(s) 467, 1093, 1448
BciT130I CCWGG 4 cut(s) 651, 806, 1343, 1460
BciVI GTATCC 1 cut(s) 236
BcoDI GTCTC 3 cut(s) 1038, 1195, 1498
BfaI CTAG 4 cut(s) 171, 264, 1215, 1418
BfoI RGCGCY 1 cut(s) 397
BfuI GTATCC 1 cut(s) 236
BglII AGATCT 1 cut(s) 906
BisI GCNGC 4 cut(s) 520, 705, 1483, 1539
BlsI GCNGC 4 cut(s) 521, 706, 1484, 1540
Bme1390I CCNGG 4 cut(s) 651, 806, 1343, 1460
Bme18I GGWCC 2 cut(s) 185, 495
BmeT110I CYCGRG 2 cut(s) 1096, 1559
BmgT120I GGNCC 4 cut(s) 185, 456, 495, 1006
BmiI GGNNCC 2 cut(s) 496, 570
BmrFI CCNGG 4 cut(s) 651, 806, 1343, 1460
BmsI GCATC 1 cut(s) 305
BoxI GACNNNNGTC 1 cut(s) 183
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 2 cut(s) 1253, 1563
Bpu14I TTCGAA 1 cut(s) 880
BsaI GGTCTC 3 cut(s) 1038, 1195, 1498
BsaJI CCNNGG 2 cut(s) 609, 650
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 2 cut(s) 737, 767
Bsc4I CCNNNNNNNGG 4 cut(s) 465, 1161, 1462, 1465
Bse118I RCCGGY 3 cut(s) 473, 529, 1577
Bse1I ACTGG 5 cut(s) 114, 572, 1324, 1403, 1411
Bse3DI GCAATG 1 cut(s) 199
BseBI CCWGG 4 cut(s) 651, 806, 1343, 1460
BseDI CCNNGG 2 cut(s) 609, 650
BseGI GGATG 3 cut(s) 143, 296, 1391
BseLI CCNNNNNNNGG 4 cut(s) 465, 1161, 1462, 1465
BseMI GCAATG 1 cut(s) 199
BseMII CTCAG 1 cut(s) 1118
BseNI ACTGG 5 cut(s) 114, 572, 1324, 1403, 1411
BseSI GKGCMC 1 cut(s) 271
BseXI GCAGC 3 cut(s) 691, 1494, 1525
BshFI GGCC 6 cut(s) 458, 519, 608, 804, 1008, 1469
BshTI ACCGGT 1 cut(s) 473
BsiHKCI CYCGRG 2 cut(s) 1096, 1559
BsiSI CCGG 3 cut(s) 474, 530, 1578
BslFI GGGAC 1 cut(s) 1184
BslI CCNNNNNNNGG 4 cut(s) 465, 1161, 1462, 1465
BsmAI GTCTC 3 cut(s) 1038, 1195, 1498
BsmFI GGGAC 1 cut(s) 1184
BsmI GAATGC 2 cut(s) 665, 1427
BsnI GGCC 6 cut(s) 458, 519, 608, 804, 1008, 1469
Bso31I GGTCTC 3 cut(s) 1038, 1195, 1498
BsoBI CYCGRG 2 cut(s) 1096, 1559
Bsp119I TTCGAA 1 cut(s) 880
Bsp1286I GDGCHC 1 cut(s) 271
BspACI CCGC 6 cut(s) 520, 986, 1004, 1323, 1456, 1485
BspANI GGCC 6 cut(s) 458, 519, 608, 804, 1008, 1469
BspCNI CTCAG 1 cut(s) 1117
BspHI TCATGA 2 cut(s) 547, 925
BspLI GGNNCC 2 cut(s) 496, 570
BspPI GGATC 6 cut(s) 120, 347, 395, 690, 1136, 1450
BspT104I TTCGAA 1 cut(s) 880
BspTNI GGTCTC 3 cut(s) 1038, 1195, 1498
BsrDI GCAATG 1 cut(s) 199
BsrFI RCCGGY 3 cut(s) 473, 529, 1577
BsrI ACTGG 5 cut(s) 114, 572, 1324, 1403, 1411
BssAI RCCGGY 3 cut(s) 473, 529, 1577
BssECI CCNNGG 2 cut(s) 609, 650
BssT1I CCWWGG 1 cut(s) 609
Bst2UI CCWGG 4 cut(s) 651, 806, 1343, 1460
Bst4CI ACNGT 2 cut(s) 316, 1064
Bst6I CTCTTC 2 cut(s) 112, 1287
BstBI TTCGAA 1 cut(s) 880
BstC8I GCNNGC 4 cut(s) 524, 722, 1002, 1006
BstDEI CTNAG 3 cut(s) 219, 447, 1104
BstF5I GGATG 3 cut(s) 143, 296, 1391
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 1 cut(s) 396
BstMAI GTCTC 3 cut(s) 1038, 1195, 1498
BstMWI GCNNNNNNNGC 1 cut(s) 539
BstNI CCWGG 4 cut(s) 651, 806, 1343, 1460
BstNSI RCATGY 1 cut(s) 326
BstPAI GACNNNNGTC 1 cut(s) 183
BstSCI CCNGG 4 cut(s) 649, 804, 1341, 1458
BstSLI GKGCMC 1 cut(s) 271
BstV1I GCAGC 3 cut(s) 691, 1494, 1525
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 4 cut(s) 352, 906, 1128, 1442
BstYI RGATCY 4 cut(s) 352, 906, 1128, 1442
BsuI GTATCC 1 cut(s) 236
BsuRI GGCC 6 cut(s) 458, 519, 608, 804, 1008, 1469
BtgZI GCGATG 1 cut(s) 711
BtsCI GGATG 3 cut(s) 143, 296, 1391
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 4 cut(s) 425, 540, 1317, 1404
Cac8I GCNNGC 4 cut(s) 524, 722, 1002, 1006
CciI TCATGA 2 cut(s) 547, 925
CfoI GCGC 1 cut(s) 396
Cfr10I RCCGGY 3 cut(s) 473, 529, 1577
Cfr13I GGNCC 4 cut(s) 185, 456, 495, 1006
Csp6I GTAC 3 cut(s) 328, 1396, 1453
CspAI ACCGGT 1 cut(s) 473
CviQI GTAC 3 cut(s) 328, 1396, 1453
DdeI CTNAG 3 cut(s) 219, 447, 1104
EaeI YGGCCR 1 cut(s) 517
Eam1104I CTCTTC 2 cut(s) 112, 1287
EarI CTCTTC 2 cut(s) 112, 1287
EciI GGCGGA 1 cut(s) 1338
Eco130I CCWWGG 1 cut(s) 609
Eco147I AGGCCT 1 cut(s) 608
Eco31I GGTCTC 3 cut(s) 1038, 1195, 1498
Eco47I GGWCC 2 cut(s) 185, 495
Eco47III AGCGCT 1 cut(s) 395
Eco57I CTGAAG 1 cut(s) 449
Eco88I CYCGRG 2 cut(s) 1096, 1559
EcoRII CCWGG 4 cut(s) 649, 804, 1341, 1458
EcoT14I CCWWGG 1 cut(s) 609
ErhI CCWWGG 1 cut(s) 609
FaqI GGGAC 1 cut(s) 1184
FauI CCCGC 1 cut(s) 997
Fnu4HI GCNGC 4 cut(s) 520, 705, 1483, 1539
FokI GGATG 3 cut(s) 150, 283, 1398
Fsp4HI GCNGC 4 cut(s) 520, 705, 1483, 1539
FspBI CTAG 4 cut(s) 171, 264, 1215, 1418
GlaI GCGC 1 cut(s) 395
GluI GCNGC 4 cut(s) 520, 705, 1483, 1539
GsuI CTGGAG 2 cut(s) 1253, 1563
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 6 cut(s) 458, 519, 608, 804, 1008, 1469
HapII CCGG 3 cut(s) 474, 530, 1578
HhaI GCGC 1 cut(s) 396
Hin6I GCGC 1 cut(s) 394
HinP1I GCGC 1 cut(s) 394
HincII GTYRAC 1 cut(s) 1570
HindII GTYRAC 1 cut(s) 1570
HindIII AAGCTT 1 cut(s) 1083
HpaII CCGG 3 cut(s) 474, 530, 1578
HphI GGTGA 6 cut(s) 73, 89, 202, 862, 1031, 1076
Hpy166II GTNNAC 4 cut(s) 328, 374, 1404, 1570
Hpy188I TCNGA 1 cut(s) 178
Hpy188III TCNNGA 9 cut(s) 309, 548, 823, 904, 926, 1035, 1383, 1446, 1550
Hpy8I GTNNAC 4 cut(s) 328, 374, 1404, 1570
HpyAV CCTTC 7 cut(s) 4, 777, 884, 983, 1010, 1016, 1157
HpyCH4III ACNGT 2 cut(s) 316, 1064
HpyCH4V TGCA 5 cut(s) 92, 192, 646, 1261, 1482
HpyF10VI GCNNNNNNNGC 1 cut(s) 539
HpyF3I CTNAG 3 cut(s) 219, 447, 1104
HspAI GCGC 1 cut(s) 394
LmnI GCTCC 3 cut(s) 143, 568, 997
Lsp1109I GCAGC 3 cut(s) 691, 1494, 1525
LweI GCATC 1 cut(s) 305
MaeI CTAG 4 cut(s) 171, 264, 1215, 1418
MaeIII GTNAC 6 cut(s) 61, 77, 476, 1240, 1315, 1428
MboII GAAGA 7 cut(s) 12, 50, 129, 392, 1025, 1237, 1274
MflI RGATCY 4 cut(s) 352, 906, 1128, 1442
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 4 cut(s) 336, 809, 847, 882
MlyI GAGTC 6 cut(s) 26, 224, 407, 1051, 1273, 1596
MmeI TCCRAC 2 cut(s) 575, 1179
MseI TTAA 4 cut(s) 258, 276, 750, 1142
MslI CAYNNNNRTG 3 cut(s) 798, 1062, 1065
MspA1I CMGCKG 1 cut(s) 1485
MspI CCGG 3 cut(s) 474, 530, 1578
MspR9I CCNGG 4 cut(s) 651, 806, 1343, 1460
Mva1269I GAATGC 2 cut(s) 665, 1427
MvaI CCWGG 4 cut(s) 651, 806, 1343, 1460
MwoI GCNNNNNNNGC 1 cut(s) 539
NlaIV GGNNCC 2 cut(s) 496, 570
NmuCI GTSAC 3 cut(s) 61, 77, 1315
NspI RCATGY 1 cut(s) 326
NspV TTCGAA 1 cut(s) 880
PagI TCATGA 2 cut(s) 547, 925
PceI AGGCCT 1 cut(s) 608
PciI ACATGT 1 cut(s) 322
PcsI WCGNNNNNNNCGW 1 cut(s) 1236
PctI GAATGC 2 cut(s) 665, 1427
PfeI GAWTC 4 cut(s) 383, 422, 763, 1620
PflFI GACNNNGTC 1 cut(s) 1041
PinAI ACCGGT 1 cut(s) 473
PkrI GCNGC 4 cut(s) 521, 706, 1484, 1540
PleI GAGTC 6 cut(s) 25, 224, 407, 1050, 1273, 1595
PpsI GAGTC 6 cut(s) 25, 224, 407, 1050, 1273, 1595
PscI ACATGT 1 cut(s) 322
PshAI GACNNNNGTC 1 cut(s) 183
Psp6I CCWGG 4 cut(s) 649, 804, 1341, 1458
PspGI CCWGG 4 cut(s) 649, 804, 1341, 1458
PspN4I GGNNCC 2 cut(s) 496, 570
PspPI GGNCC 4 cut(s) 185, 456, 495, 1006
PsuI RGATCY 4 cut(s) 352, 906, 1128, 1442
PsyI GACNNNGTC 1 cut(s) 1041
RsaI GTAC 3 cut(s) 329, 1397, 1454
RsaNI GTAC 3 cut(s) 328, 1396, 1453
RseI CAYNNNNRTG 3 cut(s) 798, 1062, 1065
SaqAI TTAA 4 cut(s) 258, 276, 750, 1142
SatI GCNGC 4 cut(s) 520, 705, 1483, 1539
Sau96I GGNCC 4 cut(s) 185, 456, 495, 1006
SchI GAGTC 6 cut(s) 26, 224, 407, 1051, 1273, 1596
ScrFI CCNGG 4 cut(s) 651, 806, 1343, 1460
SduI GDGCHC 1 cut(s) 271
SfaNI GCATC 1 cut(s) 305
SfuI TTCGAA 1 cut(s) 880
SgrAI CRCCGGYG 1 cut(s) 1577
SinI GGWCC 2 cut(s) 185, 495
SmiMI CAYNNNNRTG 3 cut(s) 798, 1062, 1065
Sse9I AATT 4 cut(s) 336, 809, 847, 882
SseBI AGGCCT 1 cut(s) 608
SsiI CCGC 6 cut(s) 520, 986, 1004, 1323, 1456, 1485
SspMI CTAG 4 cut(s) 171, 264, 1215, 1418
StuI AGGCCT 1 cut(s) 608
StyD4I CCNGG 4 cut(s) 649, 804, 1341, 1458
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 2 cut(s) 316, 1064
TaqI TCGA 7 cut(s) 115, 252, 390, 880, 1036, 1088, 1585
TaqII GACCGA 1 cut(s) 1020
TasI AATT 4 cut(s) 336, 809, 847, 882
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 4 cut(s) 383, 422, 763, 1620
Tru1I TTAA 4 cut(s) 258, 276, 750, 1142
Tru9I TTAA 4 cut(s) 258, 276, 750, 1142
TscAI CASTG 4 cut(s) 432, 540, 1324, 1411
TseFI GTSAC 3 cut(s) 61, 77, 1315
TseI GCWGC 3 cut(s) 704, 1482, 1538
Tsp45I GTSAC 3 cut(s) 61, 77, 1315
TspDTI ATGAA 8 cut(s) 12, 23, 564, 914, 1026, 1083, 1171, 1428
TspGWI ACGGA 3 cut(s) 429, 695, 1514
TspRI CASTG 4 cut(s) 432, 540, 1324, 1411
Tth111I GACNNNGTC 1 cut(s) 1041
VpaK11BI GGWCC 2 cut(s) 185, 495
XapI RAATTY 2 cut(s) 336, 809
XceI RCATGY 1 cut(s) 326
XspI CTAG 4 cut(s) 171, 264, 1215, 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.