Prupe.5G179400_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Reverse (-)
15099758 .. 15103048
3291 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G179400.2

Sequence Viewer

Length: 1410 bp
ATGGAGAGTCTCGTTGCTGAGCTCACCTCGGCTGAAGATCTTCAGGACCAACTAATAAAGATGACTGTACGGCGAGATGAGCTCTACGCCTGGTTTCGGGAGATCAGGGAAGCCATAAACGCCGTTGATCTCGAGAAATACAAACTGAGAAAGGAGGTGATTCGCCTAATAGAAGAAACGACCTCTCCAAATATCCCGCTGATTGTCTACAACAGTACAAACAACGACAACAACATTGTTAATCCTTACCCAAGCATGCCCATGGTGGGGGACCATACATCGAGGATGGCAAATCAGGGGAAAGCCAGTTCTATGTTTGTAGTGGTGAAGTATGTTGAACCCCCATACAGTGGTGCAGTATTTGAAATAAAATTAAAACGAGGAGGAGAAGACCATAGGGGCGGTGGTGCCGGAAGAGAAGGAGTCACTCATGAACCCCAACTACTTGAACCTATAGTCAAGTTATTTGGTCGTTATGCGATTCAGACGGCGAGGATTTTCAGCCGCTCCCAGTTATTTATACTCCTAGAGAACGATATTACGCACAAGACACTGCATGGATATGCTATTAACACGAAGAGTTTGTCAGTGGCTTCATTTGTGCCCCCGGGAGCTTCTAAGCGGGCTGGGGTCATTGTTTCTGCGTATGGGAAACTTTATCATCTTGCAGCTCCAGTACACCCCGAAAAACTATCCTTTGACAGTTACGATCCTGCTACAAATCTGTGGACGCCTCTGCCTAATTTTCCATTTTATTCTACGTATCCTGCCAATATGCATATAGTTGGTCATGCCGTTTGCTATGGCTTTATTTTGTTTTCAATGTGTGACTGCAATGAGCGGCGGTTCAAAGTCGCAGCTTTTCATGTGAGTACAAGTGTATGGCGTGAAGTGAAAATTGACACTTATGCTTTTGTTCCTTTCCGAGGGAGGGCCGTGGTTGTAGGCAAGACTATCTATGCCTTATCTCAATATGGAACGAACATTCTAGCATTCTCCTTCTTCTTAAAGATGGATGAAGGTGATTTTGCTTGTTCACTAAACGCACCATTAAGATTGCAGGGCCTGGAGGTTCGGGGTGGGCCATTTACATGTGGTGCTAAGCAAACAGAGTATTTGGTTCATTTGGGGAACAATGATTTTTGTCATATCCGAACTGCCCAGAACGATGAAATTGATTGTCGTCAATATCTTTGTATAACCACGTTTCAAATTGTTGTTGGAGAAGAAGGAAGTTGTATCAAGACCTTAGATTCAACTGTTTTTCATGTGGATGTTAGTCACTCTGGTACTTTCTATATTACATTCAGCTTCGCACCTGAGTGCGAGGATTTTGAACCCGAAGAAGAGAAGGAGAGTGTAGAAACAAAGTGCAAGGTAAGTTACCATCCTCACATCACTCGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

470

Amino Acids

52.83

Weight (kDa)

6.16

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 407
AccB7I CCANNNNNTGG 1 cut(s) 350
AccBSI CCGCTC 2 cut(s) 507, 841
AccI GTMKAC 1 cut(s) 207
AciI CCGC 6 cut(s) 197, 402, 505, 622, 841, 844
AclWI GGATC 1 cut(s) 704
AcuI CTGAAG 2 cut(s) 26, 54
AcyI GRCGYC 1 cut(s) 731
AfaI GTAC 5 cut(s) 69, 217, 678, 874, 1291
AfiI CCNNNNNNNGG 6 cut(s) 96, 266, 267, 350, 926, 931
AflIII ACRYGT 1 cut(s) 1091
AgsI TTSAA 8 cut(s) 338, 365, 449, 822, 850, 1211, 1257, 1337
AjnI CCWGG 2 cut(s) 89, 1065
AleI CACNNNNGTG 1 cut(s) 1321
AloI GAACNNNNNNTCC 2 cut(s) 292, 324
AluBI AGCT 6 cut(s) 22, 82, 614, 671, 860, 1311
AluI AGCT 6 cut(s) 22, 82, 614, 671, 860, 1311
Alw21I GWGCWC 2 cut(s) 24, 84
Alw26I GTCTC 1 cut(s) 14
AlwI GGATC 1 cut(s) 704
AlwNI CAGNNNCTG 1 cut(s) 1066
Ama87I CYCGRG 2 cut(s) 131, 607
AoxI GGCC 3 cut(s) 933, 1063, 1082
ApeKI GCWGC 2 cut(s) 668, 857
ArsI GACNNNNNNTTYG 2 cut(s) 569, 601
Asp700I GAANNNNTTC 1 cut(s) 39
AspS9I GGNCC 5 cut(s) 46, 271, 933, 1063, 1082
AsuC2I CCSGG 2 cut(s) 608, 609
AsuHPI GGTGA 4 cut(s) 16, 169, 337, 1034
AvaI CYCGRG 2 cut(s) 131, 607
AvaII GGWCC 2 cut(s) 46, 271
BaeGI GKGCMC 1 cut(s) 606
BanI GGYRCC 1 cut(s) 407
BanII GRGCYC 2 cut(s) 24, 84
BbsI GAAGAC 1 cut(s) 396
Bbv12I GWGCWC 2 cut(s) 24, 84
BbvI GCAGC 2 cut(s) 680, 869
BccI CCATC 3 cut(s) 280, 1006, 1395
BceAI ACGGC 5 cut(s) 86, 107, 504, 779, 920
BciT130I CCWGG 2 cut(s) 91, 1067
BciVI GTATCC 1 cut(s) 774
BcnI CCSGG 2 cut(s) 608, 609
BcoDI GTCTC 1 cut(s) 14
BfaI CTAG 2 cut(s) 527, 989
BfmI CTRYAG 1 cut(s) 453
BfuI GTATCC 1 cut(s) 774
BglII AGATCT 1 cut(s) 37
BisI GCNGC 4 cut(s) 505, 669, 842, 858
BlpI GCTNAGC 2 cut(s) 18, 1101
BlsI GCNGC 4 cut(s) 506, 670, 843, 859
Bme1390I CCNGG 4 cut(s) 91, 608, 609, 1067
Bme18I GGWCC 2 cut(s) 46, 271
BmeT110I CYCGRG 2 cut(s) 131, 607
BmgT120I GGNCC 5 cut(s) 46, 271, 933, 1063, 1082
BmiI GGNNCC 2 cut(s) 272, 409
BmrFI CCNGG 4 cut(s) 91, 608, 609, 1067
BmrI ACTGGG 1 cut(s) 505
BmuI ACTGGG 1 cut(s) 505
BpiI GAAGAC 1 cut(s) 396
BplI GAGNNNNNCTC 4 cut(s) 11, 43, 66, 98
BpmI CTGGAG 2 cut(s) 657, 1088
Bpu1102I GCTNAGC 2 cut(s) 18, 1101
BpuMI CCSGG 2 cut(s) 608, 609
BsaAI YACGTR 1 cut(s) 762
BsaHI GRCGYC 1 cut(s) 731
BsaJI CCNNGG 6 cut(s) 27, 261, 606, 607, 925, 936
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 6 cut(s) 96, 266, 267, 350, 926, 931
Bse1I ACTGG 3 cut(s) 306, 511, 674
Bse3DI GCAATG 1 cut(s) 841
BseBI CCWGG 2 cut(s) 91, 1067
BseDI CCNNGG 6 cut(s) 27, 261, 606, 607, 925, 936
BseGI GGATG 4 cut(s) 291, 1021, 1279, 1387
BseLI CCNNNNNNNGG 6 cut(s) 96, 266, 267, 350, 926, 931
BseMI GCAATG 1 cut(s) 841
BseMII CTCAG 3 cut(s) 9, 137, 1311
BseNI ACTGG 3 cut(s) 306, 511, 674
BseRI GAGGAG 2 cut(s) 396, 399
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 2 cut(s) 680, 869
BseYI CCCAGC 1 cut(s) 626
BsgI GTGCAG 1 cut(s) 375
BshFI GGCC 3 cut(s) 935, 1065, 1084
BshNI GGYRCC 1 cut(s) 407
BsiHKAI GWGCWC 2 cut(s) 24, 84
BsiHKCI CYCGRG 2 cut(s) 131, 607
BsiSI CCGG 2 cut(s) 411, 608
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 6 cut(s) 96, 266, 267, 350, 926, 931
BsmAI GTCTC 1 cut(s) 14
BsmFI GGGAC 1 cut(s) 284
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 3 cut(s) 935, 1065, 1084
BsoBI CYCGRG 2 cut(s) 131, 607
Bsp1286I GDGCHC 3 cut(s) 24, 84, 606
Bsp143I GATC 4 cut(s) 37, 102, 127, 709
Bsp1720I GCTNAGC 2 cut(s) 18, 1101
Bsp19I CCATGG 1 cut(s) 261
BspACI CCGC 6 cut(s) 197, 402, 505, 622, 841, 844
BspANI GGCC 3 cut(s) 935, 1065, 1084
BspCNI CTCAG 3 cut(s) 10, 138, 1312
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 2 cut(s) 272, 409
BspPI GGATC 1 cut(s) 704
BspT107I GGYRCC 1 cut(s) 407
BsrBI CCGCTC 2 cut(s) 507, 841
BsrDI GCAATG 1 cut(s) 841
BsrI ACTGG 3 cut(s) 306, 511, 674
BssECI CCNNGG 6 cut(s) 27, 261, 606, 607, 925, 936
BssMI GATC 4 cut(s) 37, 102, 127, 709
BssNI GRCGYC 1 cut(s) 731
BssT1I CCWWGG 1 cut(s) 261
Bst2UI CCWGG 2 cut(s) 91, 1067
Bst4CI ACNGT 5 cut(s) 67, 215, 350, 704, 1261
Bst6I CTCTTC 3 cut(s) 409, 572, 1341
BstACI GRCGYC 1 cut(s) 731
BstBAI YACGTR 1 cut(s) 762
BstC8I GCNNGC 2 cut(s) 257, 624
BstDEI CTNAG 6 cut(s) 18, 146, 618, 1101, 1249, 1320
BstDSI CCRYGG 2 cut(s) 261, 936
BstENI CCTNNNNNAGG 1 cut(s) 924
BstF5I GGATG 4 cut(s) 291, 1021, 1279, 1387
BstKTI GATC 4 cut(s) 40, 105, 130, 712
BstMAI GTCTC 1 cut(s) 14
BstMBI GATC 4 cut(s) 37, 102, 127, 709
BstMWI GCNNNNNNNGC 2 cut(s) 79, 119
BstNI CCWGG 2 cut(s) 91, 1067
BstNSI RCATGY 2 cut(s) 259, 1095
BstSCI CCNGG 4 cut(s) 89, 606, 607, 1065
BstSFI CTRYAG 1 cut(s) 453
BstSLI GKGCMC 1 cut(s) 606
BstSNI TACGTA 1 cut(s) 762
BstV1I GCAGC 2 cut(s) 680, 869
BstV2I GAAGAC 1 cut(s) 396
BstX2I RGATCY 1 cut(s) 37
BstYI RGATCY 1 cut(s) 37
BsuI GTATCC 1 cut(s) 774
BsuRI GGCC 3 cut(s) 935, 1065, 1084
BtgI CCRYGG 2 cut(s) 261, 936
BtsCI GGATG 4 cut(s) 291, 1021, 1279, 1387
BtsI GCAGTG 1 cut(s) 551
BtsIMutI CAGTG 3 cut(s) 355, 551, 594
Cac8I GCNNGC 2 cut(s) 257, 624
CaiI CAGNNNCTG 1 cut(s) 1066
CciI TCATGA 1 cut(s) 430
Cfr13I GGNCC 5 cut(s) 46, 271, 933, 1063, 1082
Cfr9I CCCGGG 1 cut(s) 607
CseI GACGC 1 cut(s) 739
Csp6I GTAC 5 cut(s) 68, 216, 677, 873, 1290
CviAII CATG 8 cut(s) 256, 262, 431, 557, 791, 866, 1092, 1268
CviQI GTAC 5 cut(s) 68, 216, 677, 873, 1290
DdeI CTNAG 6 cut(s) 18, 146, 618, 1101, 1249, 1320
DpnI GATC 4 cut(s) 39, 104, 129, 711
DpnII GATC 4 cut(s) 37, 102, 127, 709
Eam1104I CTCTTC 3 cut(s) 409, 572, 1341
EarI CTCTTC 3 cut(s) 409, 572, 1341
Ecl136II GAGCTC 2 cut(s) 22, 82
Eco105I TACGTA 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 261
Eco24I GRGCYC 2 cut(s) 24, 84
Eco47I GGWCC 2 cut(s) 46, 271
Eco53kI GAGCTC 2 cut(s) 22, 82
Eco57I CTGAAG 2 cut(s) 26, 54
Eco88I CYCGRG 2 cut(s) 131, 607
EcoICRI GAGCTC 2 cut(s) 22, 82
EcoNI CCTNNNNNAGG 1 cut(s) 924
EcoO109I RGGNCCY 1 cut(s) 1063
EcoRII CCWGG 2 cut(s) 89, 1065
EcoT14I CCWWGG 1 cut(s) 261
EcoT22I ATGCAT 1 cut(s) 780
EcoT38I GRGCYC 2 cut(s) 24, 84
ErhI CCWWGG 1 cut(s) 261
FaeI CATG 8 cut(s) 259, 265, 434, 560, 794, 869, 1095, 1271
FaqI GGGAC 1 cut(s) 284
FatI CATG 8 cut(s) 255, 261, 430, 556, 790, 865, 1091, 1267
FauI CCCGC 2 cut(s) 204, 615
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 4 cut(s) 505, 669, 842, 858
FokI GGATG 4 cut(s) 298, 1028, 1286, 1374
FriOI GRGCYC 2 cut(s) 24, 84
Fsp4HI GCNGC 4 cut(s) 505, 669, 842, 858
FspBI CTAG 2 cut(s) 527, 989
GluI GCNGC 4 cut(s) 505, 669, 842, 858
GsaI CCCAGC 1 cut(s) 630
GsuI CTGGAG 2 cut(s) 657, 1088
HaeIII GGCC 3 cut(s) 935, 1065, 1084
HapII CCGG 2 cut(s) 411, 608
HgaI GACGC 1 cut(s) 739
Hin1I GRCGYC 1 cut(s) 731
Hin1II CATG 8 cut(s) 259, 265, 434, 560, 794, 869, 1095, 1271
HinfI GANTC 5 cut(s) 7, 160, 423, 481, 1253
HpaII CCGG 2 cut(s) 411, 608
HphI GGTGA 4 cut(s) 16, 169, 337, 1034
Hpy166II GTNNAC 4 cut(s) 208, 679, 729, 1037
Hpy188I TCNGA 3 cut(s) 486, 926, 1154
Hpy188III TCNNGA 6 cut(s) 44, 98, 131, 133, 431, 1243
Hpy8I GTNNAC 4 cut(s) 208, 679, 729, 1037
HpyAV CCTTC 5 cut(s) 413, 1009, 1013, 1223, 1345
HpyCH4III ACNGT 5 cut(s) 67, 215, 350, 704, 1261
HpyCH4IV ACGT 2 cut(s) 761, 1205
HpyCH4V TGCA 7 cut(s) 356, 556, 668, 778, 834, 1060, 1374
HpyF10VI GCNNNNNNNGC 2 cut(s) 79, 119
HpyF3I CTNAG 6 cut(s) 18, 146, 618, 1101, 1249, 1320
HpySE526I ACGT 2 cut(s) 761, 1205
Hsp92I GRCGYC 1 cut(s) 731
Hsp92II CATG 8 cut(s) 259, 265, 434, 560, 794, 869, 1095, 1271
Kzo9I GATC 4 cut(s) 37, 102, 127, 709
LmnI GCTCC 3 cut(s) 512, 611, 676
Lsp1109I GCAGC 2 cut(s) 680, 869
MaeI CTAG 2 cut(s) 527, 989
MaeII ACGT 2 cut(s) 761, 1205
MaeIII GTNAC 5 cut(s) 424, 704, 827, 1280, 1382
MalI GATC 4 cut(s) 39, 104, 129, 711
MbiI CCGCTC 2 cut(s) 507, 841
MboI GATC 4 cut(s) 37, 102, 127, 709
MflI RGATCY 1 cut(s) 37
MhlI GDGCHC 3 cut(s) 24, 84, 606
MluCI AATT 6 cut(s) 371, 742, 897, 1173, 1212, 1405
MlyI GAGTC 2 cut(s) 16, 432
MmeI TCCRAC 1 cut(s) 1201
Mph1103I ATGCAT 1 cut(s) 780
MroXI GAANNNNTTC 1 cut(s) 39
MseI TTAA 6 cut(s) 240, 374, 570, 1007, 1052, 1408
MslI CAYNNNNRTG 5 cut(s) 260, 561, 1090, 1272, 1321
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 2 cut(s) 411, 608
MspR9I CCNGG 4 cut(s) 91, 608, 609, 1067
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 2 cut(s) 91, 1067
MwoI GCNNNNNNNGC 2 cut(s) 79, 119
NciI CCSGG 2 cut(s) 608, 609
NcoI CCATGG 1 cut(s) 261
NdeII GATC 4 cut(s) 37, 102, 127, 709
NlaIII CATG 8 cut(s) 259, 265, 434, 560, 794, 869, 1095, 1271
NlaIV GGNNCC 2 cut(s) 272, 409
NmeAIII GCCGAG 1 cut(s) 8
NmuCI GTSAC 3 cut(s) 424, 827, 1280
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 2 cut(s) 259, 1095
OliI CACNNNNGTG 1 cut(s) 1321
PaeI GCATGC 1 cut(s) 259
PaeR7I CTCGAG 1 cut(s) 131
PagI TCATGA 1 cut(s) 430
PciI ACATGT 1 cut(s) 1091
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 3 cut(s) 160, 481, 1253
PflMI CCANNNNNTGG 1 cut(s) 350
PkrI GCNGC 4 cut(s) 506, 670, 843, 859
PleI GAGTC 2 cut(s) 15, 431
PpsI GAGTC 2 cut(s) 15, 431
Ppu21I YACGTR 1 cut(s) 762
PscI ACATGT 1 cut(s) 1091
Psp124BI GAGCTC 2 cut(s) 24, 84
Psp6I CCWGG 2 cut(s) 89, 1065
PspFI CCCAGC 1 cut(s) 626
PspGI CCWGG 2 cut(s) 89, 1065
PspN4I GGNNCC 2 cut(s) 272, 409
PspPI GGNCC 5 cut(s) 46, 271, 933, 1063, 1082
PsrI GAACNNNNNNTAC 2 cut(s) 426, 458
PstNI CAGNNNCTG 1 cut(s) 1066
PsuI RGATCY 1 cut(s) 37
RsaI GTAC 5 cut(s) 69, 217, 678, 874, 1291
RsaNI GTAC 5 cut(s) 68, 216, 677, 873, 1290
RseI CAYNNNNRTG 5 cut(s) 260, 561, 1090, 1272, 1321
SacI GAGCTC 2 cut(s) 24, 84
SaqAI TTAA 6 cut(s) 240, 374, 570, 1007, 1052, 1408
SatI GCNGC 4 cut(s) 505, 669, 842, 858
Sau3AI GATC 4 cut(s) 37, 102, 127, 709
Sau96I GGNCC 5 cut(s) 46, 271, 933, 1063, 1082
SchI GAGTC 2 cut(s) 16, 432
ScrFI CCNGG 4 cut(s) 91, 608, 609, 1067
SduI GDGCHC 3 cut(s) 24, 84, 606
SfcI CTRYAG 1 cut(s) 453
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 2 cut(s) 46, 271
SlaI CTCGAG 1 cut(s) 131
SmaI CCCGGG 1 cut(s) 609
SmiMI CAYNNNNRTG 5 cut(s) 260, 561, 1090, 1272, 1321
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SnaBI TACGTA 1 cut(s) 762
SphI GCATGC 1 cut(s) 259
Sse9I AATT 6 cut(s) 371, 742, 897, 1173, 1212, 1405
SsiI CCGC 6 cut(s) 197, 402, 505, 622, 841, 844
SspMI CTAG 2 cut(s) 527, 989
SstI GAGCTC 2 cut(s) 24, 84
StyD4I CCNGG 4 cut(s) 89, 606, 607, 1065
StyI CCWWGG 1 cut(s) 261
TaaI ACNGT 5 cut(s) 67, 215, 350, 704, 1261
TaiI ACGT 2 cut(s) 764, 1208
TaqI TCGA 2 cut(s) 132, 281
TasI AATT 6 cut(s) 371, 742, 897, 1173, 1212, 1405
TatI WGTACW 3 cut(s) 215, 676, 872
TauI GCSGC 2 cut(s) 507, 844
TfiI GAWTC 3 cut(s) 160, 481, 1253
Tru1I TTAA 6 cut(s) 240, 374, 570, 1007, 1052, 1408
Tru9I TTAA 6 cut(s) 240, 374, 570, 1007, 1052, 1408
TscAI CASTG 3 cut(s) 355, 558, 594
TseFI GTSAC 3 cut(s) 424, 827, 1280
TseI GCWGC 2 cut(s) 668, 857
Tsp45I GTSAC 3 cut(s) 424, 827, 1280
TspDTI ATGAA 7 cut(s) 447, 585, 854, 1032, 1112, 1185, 1256
TspMI CCCGGG 1 cut(s) 607
TspRI CASTG 3 cut(s) 355, 558, 594
Van91I CCANNNNNTGG 1 cut(s) 350
VpaK11BI GGWCC 2 cut(s) 46, 271
XagI CCTNNNNNAGG 1 cut(s) 924
XceI RCATGY 2 cut(s) 259, 1095
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XhoI CTCGAG 1 cut(s) 131
XmaI CCCGGG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 2 cut(s) 527, 989
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.