Rroxscaffold_4G00280310

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000150
Physical Location & Seq
Forward (+)
2876060 .. 2879906
3847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00280310.1

Sequence Viewer

Length: 1470 bp
ATGAGCGAGAACGAACCTAAATCAGTTTTTGTCATGGCTCGCTTAGGCTTTCATGCCCAATACCATGGTGCAGTATATGAAATAGAATTCGAGAAAATTGAGAAACTAGAGAAACAAGAGTATGAAGATTCTGTAGGCGGCTTTGGTGTTGATCCATCTACTCTGCCACTGCTCGACCCCGTATTGGAGTTCTTTGATAAGAGGTGGGAGATCCCGGAGATCTGTATATTCAATGGTGCAAGGTTTGGCTCCAAGGTATACGCTATGTTAAATGAAATCAAGTGGCCTTATCGCTCGCCCTTCAGACCCACCGATGCATTTTTCTTTGACACGAATAACTTAGACTCTGATGTTCAGCAGATCTCTCCGCCTAAAACACCCAAGACATGGTCTGCAGTTATATCTGCCTATGGAATGCTTTATTATCTTGCACAACCAACATGCTTCCCATATATTAATGAACATTCATTTGAGCGATATGATCCCACCAGCGATTCTTGGGAGTCGTTGCCTTCGTATCCAGGTTATTCTCTAGGCCAGTTCCAAACGATGATATCAGGTCATCCTGTTTGTTATGGTTATATATTAATTTCAATGATTGGTGAAGAGGAATGTCTAATGGTGGCTTTTCATATTGGTACAAAAACATGGCATAAGGTCAAGCTTAGTAAATCGGTGGAAGATTTGCATGATGGTTTCTGGGGTAGGGCTGTGGTTGTAGATAATGTTATCTATGCCCTATCATCTAGTTTCGGTGAAATTTTAGCACTCTCTTTTTGGTGGGATTCGAAGGATAACAGTGAGATTATATCTCGTCGTCATTATATTGGTGCCCGGGTCTCTTTGTATTTAAAAGCTAAGGCGTATCCGCCATCCAGATTACATGGAGTGAGGACTCAGAAATTGGTTCATATGGGAAGGCGGGACTTTTGCCTTGTGCAGACGGGTCTGAACAGGGATTCTCTCGAGTATCAATATCTTGTTGTCACCACCTTTCGAATTGTCGGTGAAGGACAAAAAATGTATATCAAGACCCAACGTTCATCAGTTTTTCGAGTTGCCATCCACGGCCATGGAAGTTTTGATGTTGTTTTCAGCTTCACGCCAAATTGTAAGGACATTGAACCGGAAGAAGGAGAGTATAATAAAACTACTGCACTGACCCAAAGTGAAAGTCCTGCATGGACTTCGAAGGGGAGTGAAGGAAACCGAATAAGTATGAAGAGCCCAATCTCCGTGAAATCAGAGAATCAAGATGGATATCATTTCAAGACGGAAGAAGATCTCCCAATTAAACCAGATTCTGAGAAGGAGTGGAAAACAATTAAACCTCATCAAATAGCTCCTAGTATTTTAGGGATTGGATTCTTCTTCAGATTTTCTGGGGCGAAAGTGAAAGTTTATAAAGTGAGGTTGGAGCAGATTTCTCTTCTCTCTCCTTTCCTTGAACAAAAGTGGTTAAGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

489

Amino Acids

56.02

Weight (kDa)

6.3

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1404
AccB1I GGYRCC 1 cut(s) 830
AccB7I CCANNNNNTGG 1 cut(s) 387
AccI GTMKAC 1 cut(s) 258
AciI CCGC 4 cut(s) 138, 368, 869, 922
AclI AACGTT 1 cut(s) 1039
AclWI GGATC 3 cut(s) 146, 205, 476
AcoI YGGCCR 1 cut(s) 1069
AcsI RAATTY 2 cut(s) 86, 759
AcuI CTGAAG 2 cut(s) 286, 1357
AfaI GTAC 1 cut(s) 640
AfiI CCNNNNNNNGG 3 cut(s) 184, 387, 1133
AgsI TTSAA 5 cut(s) 232, 594, 1124, 1270, 1448
AjnI CCWGG 1 cut(s) 520
AluBI AGCT 4 cut(s) 664, 857, 1098, 1343
AluI AGCT 4 cut(s) 664, 857, 1098, 1343
Alw26I GTCTC 1 cut(s) 844
AlwI GGATC 3 cut(s) 146, 205, 476
AlwNI CAGNNNCTG 1 cut(s) 1304
Ama87I CYCGRG 2 cut(s) 834, 965
AoxI GGCC 3 cut(s) 284, 535, 1069
ApoI RAATTY 2 cut(s) 86, 759
ArsI GACNNNNNNTTYG 2 cut(s) 1159, 1191
AseI ATTAAT 2 cut(s) 456, 587
AsuC2I CCSGG 3 cut(s) 215, 835, 836
AsuHPI GGTGA 4 cut(s) 614, 767, 979, 1019
AsuII TTCGAA 3 cut(s) 788, 997, 1190
AvaI CYCGRG 2 cut(s) 834, 965
BaeGI GKGCMC 1 cut(s) 835
BanI GGYRCC 1 cut(s) 830
BanII GRGCYC 1 cut(s) 1229
BccI CCATC 5 cut(s) 163, 686, 880, 1070, 1250
BceAI ACGGC 1 cut(s) 1084
BcgI CGANNNNNNTGC 2 cut(s) 1170, 1204
BciT130I CCWGG 1 cut(s) 522
BciVI GTATCC 2 cut(s) 528, 876
BcnI CCSGG 3 cut(s) 215, 835, 836
BcoDI GTCTC 1 cut(s) 844
BfaI CTAG 4 cut(s) 107, 533, 747, 1347
BfmI CTRYAG 2 cut(s) 132, 393
BfuI GTATCC 2 cut(s) 528, 876
BglII AGATCT 3 cut(s) 219, 360, 1282
BisI GCNGC 1 cut(s) 139
BlsI GCNGC 1 cut(s) 140
Bme1390I CCNGG 4 cut(s) 215, 522, 835, 836
BmeT110I CYCGRG 2 cut(s) 834, 965
BmiI GGNNCC 2 cut(s) 250, 832
BmrFI CCNGG 4 cut(s) 215, 522, 835, 836
BmsI GCATC 1 cut(s) 304
Bpu10I CCTNAGC 2 cut(s) 43, 858
Bpu14I TTCGAA 3 cut(s) 788, 997, 1190
BpuMI CCSGG 3 cut(s) 215, 835, 836
BsaBI GATNNNNATC 1 cut(s) 1260
BsaI GGTCTC 1 cut(s) 844
BsaJI CCNNGG 5 cut(s) 64, 252, 834, 1066, 1072
BsaWI WCCGGW 1 cut(s) 1126
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 387, 1133
Bse1I ACTGG 1 cut(s) 538
Bse8I GATNNNNATC 1 cut(s) 1260
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 5 cut(s) 64, 252, 834, 1066, 1072
BseGI GGATG 3 cut(s) 562, 872, 1062
BseJI GATNNNNATC 1 cut(s) 1260
BseLI CCNNNNNNNGG 3 cut(s) 184, 387, 1133
BseMII CTCAG 2 cut(s) 911, 1296
BseNI ACTGG 1 cut(s) 538
BseSI GKGCMC 1 cut(s) 835
BsgI GTGCAG 3 cut(s) 90, 959, 1140
BshFI GGCC 3 cut(s) 286, 537, 1071
BshNI GGYRCC 1 cut(s) 830
BsiHKCI CYCGRG 2 cut(s) 834, 965
BsiSI CCGG 3 cut(s) 215, 835, 1127
BslFI GGGAC 1 cut(s) 938
BslI CCNNNNNNNGG 3 cut(s) 184, 387, 1133
BsmAI GTCTC 1 cut(s) 844
BsmFI GGGAC 1 cut(s) 938
BsmI GAATGC 1 cut(s) 420
BsnI GGCC 3 cut(s) 286, 537, 1071
Bso31I GGTCTC 1 cut(s) 844
BsoBI CYCGRG 2 cut(s) 834, 965
Bsp119I TTCGAA 3 cut(s) 788, 997, 1190
Bsp1286I GDGCHC 2 cut(s) 835, 1229
Bsp143I GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
Bsp19I CCATGG 2 cut(s) 64, 1072
BspACI CCGC 4 cut(s) 138, 368, 869, 922
BspANI GGCC 3 cut(s) 286, 537, 1071
BspCNI CTCAG 2 cut(s) 910, 1297
BspLI GGNNCC 2 cut(s) 250, 832
BspMAI CTGCAG 1 cut(s) 397
BspPI GGATC 3 cut(s) 146, 205, 476
BspQI GCTCTTC 1 cut(s) 1217
BspT104I TTCGAA 3 cut(s) 788, 997, 1190
BspT107I GGYRCC 1 cut(s) 830
BspTNI GGTCTC 1 cut(s) 844
BsrI ACTGG 1 cut(s) 538
BssECI CCNNGG 5 cut(s) 64, 252, 834, 1066, 1072
BssMI GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
BssNAI GTATAC 1 cut(s) 259
BssT1I CCWWGG 3 cut(s) 64, 252, 1072
Bst1107I GTATAC 1 cut(s) 259
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 1 cut(s) 800
Bst6I CTCTTC 3 cut(s) 600, 1217, 1434
BstBI TTCGAA 3 cut(s) 788, 997, 1190
BstC8I GCNNGC 2 cut(s) 40, 296
BstDEI CTNAG 6 cut(s) 43, 340, 665, 858, 897, 1305
BstDSI CCRYGG 3 cut(s) 64, 1066, 1072
BstF5I GGATG 3 cut(s) 562, 872, 1062
BstKTI GATC 6 cut(s) 154, 213, 222, 363, 484, 1285
BstMAI GTCTC 1 cut(s) 844
BstMBI GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 1 cut(s) 444
BstSCI CCNGG 4 cut(s) 213, 520, 833, 834
BstSFI CTRYAG 2 cut(s) 132, 393
BstSLI GKGCMC 1 cut(s) 835
BstX2I RGATCY 4 cut(s) 210, 219, 360, 1282
BstXI CCANNNNNNTGG 2 cut(s) 65, 1073
BstYI RGATCY 4 cut(s) 210, 219, 360, 1282
BstZ17I GTATAC 1 cut(s) 259
BsuI GTATCC 2 cut(s) 528, 876
BsuRI GGCC 3 cut(s) 286, 537, 1071
BtgI CCRYGG 3 cut(s) 64, 1066, 1072
BtsCI GGATG 3 cut(s) 562, 872, 1062
BtsI GCAGTG 1 cut(s) 167
BtsIMutI CAGTG 3 cut(s) 167, 805, 1157
Cac8I GCNNGC 2 cut(s) 40, 296
CaiI CAGNNNCTG 1 cut(s) 1304
Cfr9I CCCGGG 1 cut(s) 834
Csp6I GTAC 1 cut(s) 639
CviQI GTAC 1 cut(s) 639
DdeI CTNAG 6 cut(s) 43, 340, 665, 858, 897, 1305
DpnI GATC 6 cut(s) 153, 212, 221, 362, 483, 1284
DpnII GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
DraI TTTAAA 1 cut(s) 852
EaeI YGGCCR 1 cut(s) 1069
Eam1104I CTCTTC 3 cut(s) 600, 1217, 1434
EarI CTCTTC 3 cut(s) 600, 1217, 1434
EciI GGCGGA 2 cut(s) 357, 858
Eco130I CCWWGG 3 cut(s) 64, 252, 1072
Eco24I GRGCYC 1 cut(s) 1229
Eco31I GGTCTC 1 cut(s) 844
Eco32I GATATC 2 cut(s) 555, 1262
Eco57I CTGAAG 2 cut(s) 286, 1357
Eco88I CYCGRG 2 cut(s) 834, 965
EcoRI GAATTC 1 cut(s) 86
EcoRII CCWGG 1 cut(s) 520
EcoRV GATATC 2 cut(s) 555, 1262
EcoT14I CCWWGG 3 cut(s) 64, 252, 1072
EcoT22I ATGCAT 1 cut(s) 319
EcoT38I GRGCYC 1 cut(s) 1229
ErhI CCWWGG 3 cut(s) 64, 252, 1072
FaqI GGGAC 1 cut(s) 938
FauI CCCGC 1 cut(s) 915
FauNDI CATATG 1 cut(s) 912
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 1 cut(s) 139
FokI GGATG 3 cut(s) 549, 859, 1049
FriOI GRGCYC 1 cut(s) 1229
Fsp4HI GCNGC 1 cut(s) 139
FspBI CTAG 4 cut(s) 107, 533, 747, 1347
GluI GCNGC 1 cut(s) 139
HaeIII GGCC 3 cut(s) 286, 537, 1071
HapII CCGG 3 cut(s) 215, 835, 1127
HindIII AAGCTT 1 cut(s) 662
HpaII CCGG 3 cut(s) 215, 835, 1127
HphI GGTGA 4 cut(s) 614, 767, 979, 1019
Hpy166II GTNNAC 1 cut(s) 259
Hpy188I TCNGA 7 cut(s) 305, 349, 900, 951, 1246, 1306, 1376
Hpy188III TCNNGA 6 cut(s) 91, 876, 965, 1030, 1253, 1270
Hpy8I GTNNAC 1 cut(s) 259
Hpy99I CGWCG 1 cut(s) 819
HpyAV CCTTC 9 cut(s) 310, 522, 784, 912, 1004, 1127, 1186, 1196, 1303
HpyCH4III ACNGT 1 cut(s) 800
HpyCH4IV ACGT 1 cut(s) 1039
HpyCH4V TGCA 9 cut(s) 71, 239, 317, 395, 431, 688, 940, 1157, 1181
HpyF3I CTNAG 6 cut(s) 43, 340, 665, 858, 897, 1305
HpySE526I ACGT 1 cut(s) 1039
Kzo9I GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
LguI GCTCTTC 1 cut(s) 1217
LmnI GCTCC 3 cut(s) 254, 1348, 1417
LweI GCATC 1 cut(s) 304
MaeI CTAG 4 cut(s) 107, 533, 747, 1347
MaeII ACGT 1 cut(s) 1039
MaeIII GTNAC 1 cut(s) 985
MalI GATC 6 cut(s) 153, 212, 221, 362, 483, 1284
MboI GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
MflI RGATCY 4 cut(s) 210, 219, 360, 1282
MhlI GDGCHC 2 cut(s) 835, 1229
MluCI AATT 9 cut(s) 86, 96, 588, 759, 902, 999, 1108, 1290, 1323
MlyI GAGTC 3 cut(s) 338, 512, 889
MmeI TCCRAC 1 cut(s) 1395
MnlI CCTC 5 cut(s) 195, 601, 885, 1341, 1404
Mph1103I ATGCAT 1 cut(s) 319
MseI TTAA 8 cut(s) 269, 456, 587, 851, 1293, 1326, 1460, 1468
MslI CAYNNNNRTG 1 cut(s) 1071
MspI CCGG 3 cut(s) 215, 835, 1127
MspR9I CCNGG 4 cut(s) 215, 522, 835, 836
Mva1269I GAATGC 1 cut(s) 420
MvaI CCWGG 1 cut(s) 522
NciI CCSGG 3 cut(s) 215, 835, 836
NcoI CCATGG 2 cut(s) 64, 1072
NdeI CATATG 1 cut(s) 912
NdeII GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
NlaIV GGNNCC 2 cut(s) 250, 832
NmuCI GTSAC 1 cut(s) 985
NsiI ATGCAT 1 cut(s) 319
NspI RCATGY 1 cut(s) 444
NspV TTCGAA 3 cut(s) 788, 997, 1190
PaeR7I CTCGAG 1 cut(s) 965
PciSI GCTCTTC 1 cut(s) 1217
PcsI WCGNNNNNNNCGW 1 cut(s) 512
PctI GAATGC 1 cut(s) 420
PfeI GAWTC 7 cut(s) 128, 494, 785, 959, 1249, 1301, 1365
PflFI GACNNNGTC 1 cut(s) 388
PflMI CCANNNNNTGG 1 cut(s) 387
PfoI TCCNGGA 1 cut(s) 213
PkrI GCNGC 1 cut(s) 140
PleI GAGTC 3 cut(s) 338, 511, 889
PpsI GAGTC 3 cut(s) 338, 511, 889
PshBI ATTAAT 2 cut(s) 456, 587
PsiI TTATAA 1 cut(s) 1404
Psp1406I AACGTT 1 cut(s) 1039
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 2 cut(s) 250, 832
PstI CTGCAG 1 cut(s) 397
PstNI CAGNNNCTG 1 cut(s) 1304
PsuI RGATCY 4 cut(s) 210, 219, 360, 1282
PsyI GACNNNGTC 1 cut(s) 388
RsaI GTAC 1 cut(s) 640
RsaNI GTAC 1 cut(s) 639
RseI CAYNNNNRTG 1 cut(s) 1071
SapI GCTCTTC 1 cut(s) 1217
SaqAI TTAA 8 cut(s) 269, 456, 587, 851, 1293, 1326, 1460, 1468
SatI GCNGC 1 cut(s) 139
Sau3AI GATC 6 cut(s) 151, 210, 219, 360, 481, 1282
SchI GAGTC 3 cut(s) 338, 512, 889
ScrFI CCNGG 4 cut(s) 215, 522, 835, 836
SduI GDGCHC 2 cut(s) 835, 1229
SfaNI GCATC 1 cut(s) 304
SfcI CTRYAG 2 cut(s) 132, 393
Sfr274I CTCGAG 1 cut(s) 965
SfuI TTCGAA 3 cut(s) 788, 997, 1190
SlaI CTCGAG 1 cut(s) 965
SmaI CCCGGG 1 cut(s) 836
SmiMI CAYNNNNRTG 1 cut(s) 1071
SmlI CTYRAG 1 cut(s) 965
SmoI CTYRAG 1 cut(s) 965
Sse9I AATT 9 cut(s) 86, 96, 588, 759, 902, 999, 1108, 1290, 1323
SsiI CCGC 4 cut(s) 138, 368, 869, 922
SspMI CTAG 4 cut(s) 107, 533, 747, 1347
StyD4I CCNGG 4 cut(s) 213, 520, 833, 834
StyI CCWWGG 3 cut(s) 64, 252, 1072
TaaI ACNGT 1 cut(s) 800
TaiI ACGT 1 cut(s) 1042
TaqI TCGA 7 cut(s) 90, 174, 788, 966, 997, 1054, 1190
TasI AATT 9 cut(s) 86, 96, 588, 759, 902, 999, 1108, 1290, 1323
TauI GCSGC 1 cut(s) 141
TfiI GAWTC 7 cut(s) 128, 494, 785, 959, 1249, 1301, 1365
Tru1I TTAA 8 cut(s) 269, 456, 587, 851, 1293, 1326, 1460, 1468
Tru9I TTAA 8 cut(s) 269, 456, 587, 851, 1293, 1326, 1460, 1468
TscAI CASTG 3 cut(s) 174, 805, 1164
TseFI GTSAC 1 cut(s) 985
Tsp45I GTSAC 1 cut(s) 985
TspGWI ACGGA 2 cut(s) 1225, 1289
TspMI CCCGGG 1 cut(s) 834
TspRI CASTG 3 cut(s) 174, 805, 1164
Tth111I GACNNNGTC 1 cut(s) 388
Van91I CCANNNNNTGG 1 cut(s) 387
VspI ATTAAT 2 cut(s) 456, 587
XapI RAATTY 2 cut(s) 86, 759
XceI RCATGY 1 cut(s) 444
XhoI CTCGAG 1 cut(s) 965
XmaI CCCGGG 1 cut(s) 834
XmiI GTMKAC 1 cut(s) 258
XspI CTAG 4 cut(s) 107, 533, 747, 1347
Zsp2I ATGCAT 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.