Prupe.5G190500_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Reverse (-)
15620228 .. 15622365
2138 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G190500.1

Sequence Viewer

Length: 1575 bp
ATGGCATCACGCCAGGATGAGCTCCTGGGTAAGATACCAAAGATCCAGAAATCTCTGCCCAAGATATCGGAGATGGAGAACTCTCTGAGCGAACTGGGACAGATATGGAAGACGGAGAAATCGTTGGGCGAACTGGGCAAGATATCAAAGATGGAGAAATCTCTAGCTGCGCTGAAGAAATTAATATCGGAGAAGCTTGACCTACTACGCCCCGTCAGTCGCAAACATGGGGCCGTTCGTCCTTACCCAAGCTTGCCCATGGTTGAGAATGCATCAACGACGGTAAATCAGGGGGAAGATAGATCTTTGTTTTTAATGGTAACTTTCATTAGGGGCAAATACACTAATGCCATATATGAAGTCAAATTCAGATTTGGAGGAGAAGTTGACGATATAGGTGCACGAGTAGCACGTGTAGCCAAGTTCAGTGGTTCTACCCATTTGGGTGCAAGGATTTTCGACCGCTCCCAACTATATGTGTTTTCAAGGGAGGGTTGGGATAAACCTTGCGTTAAGTCATTTGGAGGGTATATATTTGATACGAAAACAAGGGCATTGGATCACTTAACACCTTCTACCGTACAGTTTAAGCCGCATGGAACAGTTGTGTCGGCATATGGCACACTTTATTTTCTTGAAGCCAAAACGGACTTCGTACAAGGTTCAGCCTTATTCTTTGGGAAATACAACCCTGATAAGAAGGATTGGGTGCAAATGCCTTCGTTTCCATTTTCTCATAGTTTTCGTATGGCGGTAACTGGTTATGCCGTTGGTTTTGGCGTTATTTTGTATACATTGTCTGACTTGCACAGAAACTTTGATGTCCTTGCTTTTCATGTGGGTAGAAAGAATTGGAAACGAGTGGAAATTGGCACTTGTACTCCTTTCCGAGGGAGGGCCGTGATTATAGGCAAGACTATCTATGCCTTACATATGTTTCAGGTGGGGGTGATCATAGCATACTCCTTGGAGATTAAGGAAGATGATGAGGGTGGTATTGAATATTCACTAGTCCAGCTATCTGAATTAAACGGCCTTGACATTGCAGATCCGCCATCACAATTTGATGGACTTGTAACCGACCATTTGGTTCACATGGGAAACCAAGACTTCGTTCATTTTAAGACTGGCACTAACGAAGAATGTGATAAGGTTCAAGATCTTTGTATCACCAGGTTTCAAATTGTACAAGAAGGAAGGAGACATATGATCGAGACCTTACATTCAACTGTTCTTCCTGTGAAAATCAATGGTTGTAATTGGTTCACCCTTACGCTCGGCTTTACTCCAGAGTGCGGAGATTATGAACCCAAAGAAGGTAAGAGTGCAGCAAGCATGAAGCAGCCAAAACAAGAAGATGACACCACTTTGGATGAGAATTCTTTGATGCATGAGGAAGAAGCCAAACATGAAGTAGCCTTAATGCATCATGAAAAAGCAAATCAGAAAAAACCCAAGAATGCAAGCGGAATAATTAAAAACAAAAGAAAAAGAAAAAGTGGATGGACGGAGGGATTACATGTAACCAAAAAGAAGAAGGTGGGATTACAGGTAGACTGTAATGTAAGTACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

525

Amino Acids

58.99

Weight (kDa)

8.93

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 465
AccI GTMKAC 2 cut(s) 791, 1554
AciI CCGC 6 cut(s) 463, 593, 752, 1052, 1296, 1467
AclWI GGATC 3 cut(s) 37, 567, 1043
AcsI RAATTY 2 cut(s) 365, 1378
AcuI CTGAAG 1 cut(s) 194
AcvI CACGTG 1 cut(s) 413
AfaI GTAC 5 cut(s) 582, 657, 880, 1188, 1570
AfiI CCNNNNNNNGG 4 cut(s) 890, 895, 1295, 1316
AflIII ACRYGT 2 cut(s) 412, 1519
AgsI TTSAA 6 cut(s) 486, 638, 1001, 1157, 1181, 1227
AhlI ACTAGT 1 cut(s) 1009
AjnI CCWGG 3 cut(s) 12, 24, 1172
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 1098, 1130
AluBI AGCT 5 cut(s) 22, 167, 196, 252, 1018
AluI AGCT 5 cut(s) 22, 167, 196, 252, 1018
Alw21I GWGCWC 2 cut(s) 24, 403
Alw26I GTCTC 2 cut(s) 1195, 1208
Alw44I GTGCAC 1 cut(s) 399
AlwI GGATC 3 cut(s) 37, 567, 1043
AoxI GGCC 3 cut(s) 231, 897, 1033
ApaLI GTGCAC 1 cut(s) 399
ApeKI GCWGC 3 cut(s) 167, 1328, 1342
ApoI RAATTY 2 cut(s) 365, 1378
AseI ATTAAT 1 cut(s) 182
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 2 cut(s) 231, 897
AsuHPI GGTGA 3 cut(s) 961, 1162, 1258
BaeGI GKGCMC 1 cut(s) 403
BanII GRGCYC 1 cut(s) 24
BauI CACGAG 1 cut(s) 402
BbrPI CACGTG 1 cut(s) 413
BbsI GAAGAC 1 cut(s) 116
Bbv12I GWGCWC 2 cut(s) 24, 403
BbvI GCAGC 3 cut(s) 154, 1340, 1354
BccI CCATC 5 cut(s) 67, 145, 1061, 1063, 1497
BceAI ACGGC 4 cut(s) 218, 752, 884, 1048
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 3 cut(s) 14, 26, 1174
BclI TGATCA 1 cut(s) 951
BcoDI GTCTC 2 cut(s) 1195, 1208
BcuI ACTAGT 1 cut(s) 1009
BfaI CTAG 2 cut(s) 164, 1010
BglII AGATCT 2 cut(s) 302, 1159
BisI GCNGC 4 cut(s) 168, 593, 1329, 1343
BlsI GCNGC 4 cut(s) 169, 594, 1330, 1344
Bme1390I CCNGG 3 cut(s) 14, 26, 1174
BmgT120I GGNCC 2 cut(s) 231, 897
BmiI GGNNCC 1 cut(s) 232
BmrFI CCNGG 3 cut(s) 14, 26, 1174
BmrI ACTGGG 2 cut(s) 104, 143
BmsI GCATC 4 cut(s) 14, 281, 1377, 1435
BmuI ACTGGG 2 cut(s) 104, 143
BpiI GAAGAC 1 cut(s) 116
BpmI CTGGAG 1 cut(s) 1272
BsaAI YACGTR 1 cut(s) 413
BsaI GGTCTC 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 25, 258, 889, 966
BsaXI ACNNNNNCTCC 6 cut(s) 107, 137, 369, 399, 865, 895
Bsc4I CCNNNNNNNGG 4 cut(s) 890, 895, 1295, 1316
Bse1I ACTGG 4 cut(s) 99, 138, 763, 1132
Bse3DI GCAATG 1 cut(s) 1041
BseBI CCWGG 3 cut(s) 14, 26, 1174
BseDI CCNNGG 4 cut(s) 25, 258, 889, 966
BseGI GGATG 3 cut(s) 22, 1378, 1508
BseLI CCNNNNNNNGG 4 cut(s) 890, 895, 1295, 1316
BseMI GCAATG 1 cut(s) 1041
BseMII CTCAG 1 cut(s) 77
BseNI ACTGG 4 cut(s) 99, 138, 763, 1132
BseRI GAGGAG 1 cut(s) 393
BseSI GKGCMC 1 cut(s) 403
BseXI GCAGC 3 cut(s) 154, 1340, 1354
BsgI GTGCAG 1 cut(s) 1347
Bsh1285I CGRYCG 1 cut(s) 463
BshFI GGCC 3 cut(s) 233, 899, 1035
BsiEI CGRYCG 1 cut(s) 463
BsiHKAI GWGCWC 2 cut(s) 24, 403
BslFI GGGAC 1 cut(s) 111
BslI CCNNNNNNNGG 4 cut(s) 890, 895, 1295, 1316
BsmAI GTCTC 2 cut(s) 1195, 1208
BsmFI GGGAC 1 cut(s) 111
BsmI GAATGC 2 cut(s) 274, 1465
BsnI GGCC 3 cut(s) 233, 899, 1035
Bso31I GGTCTC 1 cut(s) 1208
Bsp1286I GDGCHC 2 cut(s) 24, 403
Bsp1407I TGTACA 1 cut(s) 1186
Bsp143I GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
Bsp19I CCATGG 1 cut(s) 258
BspACI CCGC 6 cut(s) 463, 593, 752, 1052, 1296, 1467
BspANI GGCC 3 cut(s) 233, 899, 1035
BspCNI CTCAG 1 cut(s) 78
BspHI TCATGA 1 cut(s) 1429
BspLI GGNNCC 1 cut(s) 232
BspPI GGATC 3 cut(s) 37, 567, 1043
BspTNI GGTCTC 1 cut(s) 1208
BsrBI CCGCTC 1 cut(s) 465
BsrDI GCAATG 1 cut(s) 1041
BsrGI TGTACA 1 cut(s) 1186
BsrI ACTGG 4 cut(s) 99, 138, 763, 1132
BssECI CCNNGG 4 cut(s) 25, 258, 889, 966
BssMI GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
BssNAI GTATAC 1 cut(s) 792
BssSI CACGAG 1 cut(s) 402
BssT1I CCWWGG 2 cut(s) 258, 966
Bst1107I GTATAC 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 402
Bst2UI CCWGG 3 cut(s) 14, 26, 1174
Bst4CI ACNGT 6 cut(s) 283, 580, 585, 604, 1231, 1559
BstAUI TGTACA 1 cut(s) 1186
BstBAI YACGTR 1 cut(s) 413
BstC8I GCNNGC 3 cut(s) 254, 1333, 1465
BstDEI CTNAG 1 cut(s) 86
BstDSI CCRYGG 1 cut(s) 258
BstENI CCTNNNNNAGG 1 cut(s) 888
BstF5I GGATG 3 cut(s) 22, 1378, 1508
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 7 cut(s) 45, 305, 562, 954, 1051, 1162, 1212
BstMAI GTCTC 2 cut(s) 1195, 1208
BstMBI GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
BstMCI CGRYCG 1 cut(s) 463
BstMWI GCNNNNNNNGC 3 cut(s) 135, 407, 416
BstNI CCWGG 3 cut(s) 14, 26, 1174
BstNSI RCATGY 1 cut(s) 1523
BstSCI CCNGG 3 cut(s) 12, 24, 1172
BstSLI GKGCMC 1 cut(s) 403
BstV1I GCAGC 3 cut(s) 154, 1340, 1354
BstV2I GAAGAC 1 cut(s) 116
BstX2I RGATCY 4 cut(s) 42, 302, 1048, 1159
BstYI RGATCY 4 cut(s) 42, 302, 1048, 1159
BstZ17I GTATAC 1 cut(s) 792
BsuRI GGCC 3 cut(s) 233, 899, 1035
BtgI CCRYGG 1 cut(s) 258
BtsCI GGATG 3 cut(s) 22, 1378, 1508
BtsIMutI CAGTG 1 cut(s) 433
Cac8I GCNNGC 3 cut(s) 254, 1333, 1465
CciI TCATGA 1 cut(s) 1429
CfoI GCGC 1 cut(s) 172
Cfr13I GGNCC 2 cut(s) 231, 897
CsiI ACCWGGT 1 cut(s) 1172
Csp6I GTAC 5 cut(s) 581, 656, 879, 1187, 1569
CspCI CAANNNNNGTGG 2 cut(s) 409, 444
CviQI GTAC 5 cut(s) 581, 656, 879, 1187, 1569
DdeI CTNAG 1 cut(s) 86
DpnI GATC 7 cut(s) 44, 304, 561, 953, 1050, 1161, 1211
DpnII GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
EciI GGCGGA 1 cut(s) 1041
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 258, 966
Eco24I GRGCYC 1 cut(s) 24
Eco31I GGTCTC 1 cut(s) 1208
Eco32I GATATC 2 cut(s) 66, 144
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 1 cut(s) 194
Eco72I CACGTG 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 22
EcoNI CCTNNNNNAGG 1 cut(s) 888
EcoRI GAATTC 1 cut(s) 1378
EcoRII CCWGG 3 cut(s) 12, 24, 1172
EcoRV GATATC 2 cut(s) 66, 144
EcoT14I CCWWGG 2 cut(s) 258, 966
EcoT22I ATGCAT 3 cut(s) 274, 1392, 1428
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 2 cut(s) 258, 966
FaqI GGGAC 1 cut(s) 111
FauNDI CATATG 3 cut(s) 616, 933, 1206
FbaI TGATCA 1 cut(s) 951
FblI GTMKAC 2 cut(s) 791, 1554
Fnu4HI GCNGC 4 cut(s) 168, 593, 1329, 1343
FokI GGATG 3 cut(s) 29, 1385, 1515
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 4 cut(s) 168, 593, 1329, 1343
FspBI CTAG 2 cut(s) 164, 1010
GlaI GCGC 1 cut(s) 171
GluI GCNGC 4 cut(s) 168, 593, 1329, 1343
GsuI CTGGAG 1 cut(s) 1272
HaeIII GGCC 3 cut(s) 233, 899, 1035
HhaI GCGC 1 cut(s) 172
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HindIII AAGCTT 2 cut(s) 194, 250
HphI GGTGA 3 cut(s) 961, 1162, 1258
Hpy166II GTNNAC 6 cut(s) 388, 401, 792, 1093, 1266, 1555
Hpy188I TCNGA 8 cut(s) 70, 87, 190, 371, 802, 890, 1024, 1446
Hpy188III TCNNGA 6 cut(s) 46, 635, 1157, 1213, 1289, 1430
Hpy8I GTNNAC 6 cut(s) 388, 401, 792, 1093, 1266, 1555
Hpy99I CGWCG 1 cut(s) 283
HpyAV CCTTC 7 cut(s) 582, 694, 729, 1187, 1191, 1310, 1531
HpyCH4III ACNGT 6 cut(s) 283, 580, 585, 604, 1231, 1559
HpyCH4IV ACGT 1 cut(s) 412
HpyF10VI GCNNNNNNNGC 3 cut(s) 135, 407, 416
HpyF3I CTNAG 1 cut(s) 86
HpySE526I ACGT 1 cut(s) 412
HspAI GCGC 1 cut(s) 170
Ksp22I TGATCA 1 cut(s) 951
Kzo9I GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
LmnI GCTCC 2 cut(s) 27, 470
Lsp1109I GCAGC 3 cut(s) 154, 1340, 1354
LweI GCATC 4 cut(s) 14, 281, 1377, 1435
MabI ACCWGGT 1 cut(s) 1172
MaeI CTAG 2 cut(s) 164, 1010
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 4 cut(s) 319, 754, 1075, 1522
MalI GATC 7 cut(s) 44, 304, 561, 953, 1050, 1161, 1211
MbiI CCGCTC 1 cut(s) 465
MboI GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
MboII GAAGA 9 cut(s) 121, 187, 308, 992, 1151, 1226, 1367, 1409, 1546
MflI RGATCY 4 cut(s) 42, 302, 1048, 1159
MhlI GDGCHC 2 cut(s) 24, 403
MnlI CCTC 8 cut(s) 371, 484, 518, 884, 888, 982, 1387, 1504
Mph1103I ATGCAT 3 cut(s) 274, 1392, 1428
MslI CAYNNNNRTG 1 cut(s) 444
MspR9I CCNGG 3 cut(s) 14, 26, 1174
Mva1269I GAATGC 2 cut(s) 274, 1465
MvaI CCWGG 3 cut(s) 14, 26, 1174
MwoI GCNNNNNNNGC 3 cut(s) 135, 407, 416
NcoI CCATGG 1 cut(s) 258
NdeI CATATG 3 cut(s) 616, 933, 1206
NdeII GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
NlaIV GGNNCC 1 cut(s) 232
NmeAIII GCCGAG 1 cut(s) 1257
NsiI ATGCAT 3 cut(s) 274, 1392, 1428
NspI RCATGY 1 cut(s) 1523
PagI TCATGA 1 cut(s) 1429
PciI ACATGT 1 cut(s) 1519
PcsI WCGNNNNNNNCGW 2 cut(s) 119, 409
PctI GAATGC 2 cut(s) 274, 1465
PkrI GCNGC 4 cut(s) 169, 594, 1330, 1344
PmaCI CACGTG 1 cut(s) 413
PmlI CACGTG 1 cut(s) 413
Ppu21I YACGTR 1 cut(s) 413
PscI ACATGT 1 cut(s) 1519
PshBI ATTAAT 1 cut(s) 182
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 3 cut(s) 12, 24, 1172
PspCI CACGTG 1 cut(s) 413
PspGI CCWGG 3 cut(s) 12, 24, 1172
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 2 cut(s) 231, 897
PsuI RGATCY 4 cut(s) 42, 302, 1048, 1159
RsaI GTAC 5 cut(s) 582, 657, 880, 1188, 1570
RsaNI GTAC 5 cut(s) 581, 656, 879, 1187, 1569
RseI CAYNNNNRTG 1 cut(s) 444
SacI GAGCTC 1 cut(s) 24
SatI GCNGC 4 cut(s) 168, 593, 1329, 1343
Sau3AI GATC 7 cut(s) 42, 302, 559, 951, 1048, 1159, 1209
Sau96I GGNCC 2 cut(s) 231, 897
ScrFI CCNGG 3 cut(s) 14, 26, 1174
SduI GDGCHC 2 cut(s) 24, 403
SexAI ACCWGGT 1 cut(s) 1172
SfaNI GCATC 4 cut(s) 14, 281, 1377, 1435
SmiMI CAYNNNNRTG 1 cut(s) 444
SpeI ACTAGT 1 cut(s) 1009
SsiI CCGC 6 cut(s) 463, 593, 752, 1052, 1296, 1467
SspI AATATT 1 cut(s) 1004
SspMI CTAG 2 cut(s) 164, 1010
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 3 cut(s) 12, 24, 1172
StyI CCWWGG 2 cut(s) 258, 966
TaaI ACNGT 6 cut(s) 283, 580, 585, 604, 1231, 1559
TaiI ACGT 1 cut(s) 415
TaqI TCGA 2 cut(s) 459, 1212
TatI WGTACW 2 cut(s) 878, 1186
TauI GCSGC 1 cut(s) 595
TscAI CASTG 1 cut(s) 433
TseI GCWGC 3 cut(s) 167, 1328, 1342
TspDTI ATGAA 8 cut(s) 316, 372, 824, 1106, 1320, 1352, 1425, 1446
TspGWI ACGGA 3 cut(s) 128, 662, 1523
TspRI CASTG 1 cut(s) 433
VneI GTGCAC 1 cut(s) 399
VspI ATTAAT 1 cut(s) 182
XagI CCTNNNNNAGG 1 cut(s) 888
XapI RAATTY 2 cut(s) 365, 1378
XceI RCATGY 1 cut(s) 1523
XmiI GTMKAC 2 cut(s) 791, 1554
XspI CTAG 2 cut(s) 164, 1010
Zsp2I ATGCAT 3 cut(s) 274, 1392, 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.