Prupe.5G216900_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Forward (+)
16996343 .. 16999570
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G216900.1

Sequence Viewer

Length: 1785 bp
ATGAGTTTCCTGTGTCTAGCAAGATTAATTAGTTCATTCATCTGCCGTGCAATTCAGACTTCACAAAACATCTGCCCTTCAATCTTTTATTTCCAGAATTTTCGACGGCCGCGGCATTCCCTTTGCCCAGCCCAACTTGGAATTTTTTCAATAGCAGAGGCCCTATCATCCGGTACCATGTCTCAACCTTCCACCGCCGCTAAGCTCACCTCGGGTCAAGACCATGTGGCTTCACGCCAAGATAATCTGCTGGGCAAGATATCGGAGATGGAGAAATCTATGGGCAAGATATCGCAGATGGAGAAATCTCTGGGCAAGATATGGGAGATGAACAAATCTCTGGGCAAGATATTGGAGATGGAGAAATCTCTGGGAAAGATACCGGAGATGGAGGAATCTCTGGGCCAACTGTTTGATTTGACAAAATCAATAACGGAGGAGCTTTGCTTACTACTCCCCATCCCACACGTAACGACGGCCATTCCAATTTCCACGGTGATTGACGGCAGTCCCAACCATGAGGCCGTTAAGCTTTATCCAAGCAGCTTGCCTGTGGATTGGGAGCATGCATCAACTAGATCTGTATATTTATTGGTGTCTTCTTATGGGCGCGAATACTCTAATGCAATCTATGAAGTGAAATTCAAACACGGAGCAGGAGTCACTCATGAACCCCCAGTGGTTGGACTTGTTGCCAAGTTCTGTGAGGGTATATGCATTCAAGCTGCACGGAATTTCAACCGCTCCAAATTATACATTCTTATGCAGGAAGGTGGATATATTATTGACACCAACAATAATAGGTTAACACATTCATCTATTCCTCCTACCCTAGCTCCTAAATCAATAGCAACTGTTGTGTCTGCGTATGACAAGATTTATTGTGTTGCAAGTCCATCATGCTTCCCACTAAGTTCGGAGCCCTCATTTGAGAGATATGATCCTGATCGGAATATTTGGGAGGAAATGCCTTCGTTTCCATTTTATAGATATTATGACACCTATATGGATATAACTGGTTATGCTGTTTGTTATGGCGTTATTTTGTTTTCATTGTGTGGGTGGAAAGAAAATAATTTCGATGTCGTTGCTTTTCATGAGAGTAGAAAGCGATGGAATCGGGTGCAAGTTGACACTTCTATTCGTTATGCTCCTTTCCATGGGAGGGCCGTGGTTGTCGGCAAGACTATATGTGCCTTACATGGGGATGAGTTTATAGGATTCTCTTTTAGTATGGACAAAGGTAATGACGATATTATTGCGTACTCCCTAAGAAAAATGTTTGTATTGCAAGGCCTGGAGATTGCGAGTCCGCCATGGCCATTTTGTGACTATAAGACAGAGTATTTAGTTCATTTGGGGAACCTTGACTTTTTCCATGTAAAGACCGGTTGTTGCGATGTAAATATCGAGGTTCAATTTCTTTGTATCACCACATTTCAAGTTGTTGTTGGAGATGGAGGAAGAGATATGATCAAGACCATAAATTCAACTGTTCATTCTGTGGATATCAAAGACCTTGATTGGTTTTGGCTTATTTTCTGCTTTACGCCTGATTTTGGAGATTATGAACCTATTTCGGATAAACAAGACTGCACTATGGATGAGAATTGTTTTCTGGTTGGGGGGAATTACACGACAATGGCAAAGAAAGAAGAAGCTAAGCAAGGAATAGCGGCCAGAAAGCTGGAAGAAATAGCCGCGAGGCAGCTTGAAATAAGAAATTATAAGAAAATTTGCCCCTCAAATATGCGAATTCAGAAGCCTCGGAGAGCCACCACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

595

Amino Acids

67.08

Weight (kDa)

6.42

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1728
Acc65I GGTACC 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 173
AccB7I CCANNNNNTGG 1 cut(s) 683
AccBSI CCGCTC 1 cut(s) 744
AccII CGCG 3 cut(s) 112, 612, 1703
AciI CCGC 8 cut(s) 110, 112, 195, 198, 742, 1313, 1676, 1701
AclWI GGATC 1 cut(s) 935
AcoI YGGCCR 4 cut(s) 107, 477, 1319, 1677
AcsI RAATTY 7 cut(s) 97, 141, 641, 733, 1486, 1734, 1755
AfaI GTAC 2 cut(s) 175, 1265
AfiI CCNNNNNNNGG 5 cut(s) 683, 1160, 1165, 1203, 1559
AflIII ACRYGT 1 cut(s) 466
AgeI ACCGGT 1 cut(s) 1388
AgsI TTSAA 9 cut(s) 81, 150, 646, 722, 739, 1418, 1442, 1491, 1715
AjnI CCWGG 1 cut(s) 1296
AluBI AGCT 9 cut(s) 205, 442, 532, 546, 725, 836, 1661, 1687, 1711
AluI AGCT 9 cut(s) 205, 442, 532, 546, 725, 836, 1661, 1687, 1711
Alw26I GTCTC 1 cut(s) 186
AlwI GGATC 1 cut(s) 935
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 9 cut(s) 107, 159, 403, 477, 522, 1167, 1294, 1319, 1677
ApeKI GCWGC 3 cut(s) 543, 725, 1708
ApoI RAATTY 7 cut(s) 97, 141, 641, 733, 1486, 1734, 1755
AseI ATTAAT 1 cut(s) 26
AsiGI ACCGGT 1 cut(s) 1388
Asp700I GAANNNNTTC 1 cut(s) 145
Asp718I GGTACC 1 cut(s) 173
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 3 cut(s) 160, 403, 1167
AsuHPI GGTGA 3 cut(s) 199, 508, 1423
AvaI CYCGRG 1 cut(s) 211
BalI TGGCCA 1 cut(s) 1321
BanI GGYRCC 1 cut(s) 173
BanII GRGCYC 1 cut(s) 924
BbsI GAAGAC 1 cut(s) 591
BbvI GCAGC 3 cut(s) 555, 712, 1720
BccI CCATC 8 cut(s) 262, 292, 352, 382, 467, 904, 1107, 1451
BceAI ACGGC 6 cut(s) 30, 122, 492, 509, 520, 1154
BcgI CGANNNNNNTGC 4 cut(s) 1070, 1104, 1241, 1275
BciT130I CCWGG 1 cut(s) 1298
BclI TGATCA 1 cut(s) 1473
BcoDI GTCTC 1 cut(s) 186
BfaI CTAG 4 cut(s) 17, 576, 833, 1783
BglII AGATCT 1 cut(s) 578
BisI GCNGC 8 cut(s) 110, 113, 198, 544, 726, 1677, 1701, 1709
BlpI GCTNAGC 2 cut(s) 201, 1662
BlsI GCNGC 8 cut(s) 111, 114, 199, 545, 727, 1678, 1702, 1710
Bme1390I CCNGG 1 cut(s) 1298
BmeT110I CYCGRG 1 cut(s) 211
BmgT120I GGNCC 3 cut(s) 160, 403, 1167
BmiI GGNNCC 3 cut(s) 175, 921, 1364
BmrFI CCNGG 1 cut(s) 1298
BmrI ACTGGG 1 cut(s) 671
BmsI GCATC 1 cut(s) 578
BmuI ACTGGG 1 cut(s) 671
BoxI GACNNNNGTC 1 cut(s) 507
BpiI GAAGAC 1 cut(s) 591
BpmI CTGGAG 1 cut(s) 1319
Bpu1102I GCTNAGC 2 cut(s) 201, 1662
BsaAI YACGTR 1 cut(s) 469
BsaBI GATNNNNATC 1 cut(s) 945
BsaJI CCNNGG 7 cut(s) 110, 210, 492, 1159, 1170, 1316, 1766
BsaWI WCCGGW 3 cut(s) 170, 382, 1388
BsaXI ACNNNNNCTCC 4 cut(s) 645, 675, 820, 850
Bsc4I CCNNNNNNNGG 5 cut(s) 683, 1160, 1165, 1203, 1559
Bse118I RCCGGY 1 cut(s) 1388
Bse1I ACTGG 2 cut(s) 677, 1021
Bse8I GATNNNNATC 1 cut(s) 945
BseBI CCWGG 1 cut(s) 1298
BseDI CCNNGG 7 cut(s) 110, 210, 492, 1159, 1170, 1316, 1766
BseGI GGATG 4 cut(s) 167, 459, 1213, 1609
BseJI GATNNNNATC 1 cut(s) 945
BseLI CCNNNNNNNGG 5 cut(s) 683, 1160, 1165, 1203, 1559
BseNI ACTGG 2 cut(s) 677, 1021
BseRI GAGGAG 1 cut(s) 452
BseX3I CGGCCG 1 cut(s) 107
BseXI GCAGC 3 cut(s) 555, 712, 1720
BseYI CCCAGC 2 cut(s) 127, 250
BsgI GTGCAG 2 cut(s) 711, 1579
Bsh1236I CGCG 3 cut(s) 112, 612, 1703
Bsh1285I CGRYCG 1 cut(s) 110
BshFI GGCC 9 cut(s) 109, 161, 405, 479, 524, 1169, 1296, 1321, 1679
BshNI GGYRCC 1 cut(s) 173
BshTI ACCGGT 1 cut(s) 1388
BsiEI CGRYCG 1 cut(s) 110
BsiHKCI CYCGRG 1 cut(s) 211
BsiSI CCGG 3 cut(s) 171, 383, 1389
BslFI GGGAC 1 cut(s) 495
BslI CCNNNNNNNGG 5 cut(s) 683, 1160, 1165, 1203, 1559
BsmAI GTCTC 1 cut(s) 186
BsmFI GGGAC 1 cut(s) 495
BsmI GAATGC 2 cut(s) 115, 717
BsnI GGCC 9 cut(s) 109, 161, 405, 479, 524, 1169, 1296, 1321, 1679
BsoBI CYCGRG 1 cut(s) 211
Bsp1286I GDGCHC 1 cut(s) 924
Bsp143I GATC 4 cut(s) 578, 940, 946, 1473
Bsp1720I GCTNAGC 2 cut(s) 201, 1662
Bsp19I CCATGG 2 cut(s) 1159, 1316
BspACI CCGC 8 cut(s) 110, 112, 195, 198, 742, 1313, 1676, 1701
BspANI GGCC 9 cut(s) 109, 161, 405, 479, 524, 1169, 1296, 1321, 1679
BspFNI CGCG 3 cut(s) 112, 612, 1703
BspHI TCATGA 2 cut(s) 667, 1096
BspLI GGNNCC 3 cut(s) 175, 921, 1364
BspPI GGATC 1 cut(s) 935
BspT107I GGYRCC 1 cut(s) 173
BsrBI CCGCTC 1 cut(s) 744
BsrFI RCCGGY 1 cut(s) 1388
BsrI ACTGG 2 cut(s) 677, 1021
BssAI RCCGGY 1 cut(s) 1388
BssECI CCNNGG 7 cut(s) 110, 210, 492, 1159, 1170, 1316, 1766
BssMI GATC 4 cut(s) 578, 940, 946, 1473
BssT1I CCWWGG 2 cut(s) 1159, 1316
Bst2UI CCWGG 1 cut(s) 1298
Bst4CI ACNGT 4 cut(s) 411, 496, 856, 1495
Bst6I CTCTTC 1 cut(s) 1459
BstBAI YACGTR 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 548, 567
BstDEI CTNAG 4 cut(s) 201, 911, 1271, 1662
BstDSI CCRYGG 5 cut(s) 110, 492, 1159, 1170, 1316
BstF5I GGATG 4 cut(s) 167, 459, 1213, 1609
BstFNI CGCG 3 cut(s) 112, 612, 1703
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 4 cut(s) 581, 943, 949, 1476
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 4 cut(s) 578, 940, 946, 1473
BstMCI CGRYCG 1 cut(s) 110
BstNI CCWGG 1 cut(s) 1298
BstNSI RCATGY 1 cut(s) 569
BstPAI GACNNNNGTC 1 cut(s) 507
BstSCI CCNGG 1 cut(s) 1296
BstUI CGCG 3 cut(s) 112, 612, 1703
BstV1I GCAGC 3 cut(s) 555, 712, 1720
BstV2I GAAGAC 1 cut(s) 591
BstX2I RGATCY 1 cut(s) 578
BstXI CCANNNNNNTGG 1 cut(s) 1687
BstYI RGATCY 1 cut(s) 578
BstZI CGGCCG 1 cut(s) 107
BsuRI GGCC 9 cut(s) 109, 161, 405, 479, 524, 1169, 1296, 1321, 1679
BtgI CCRYGG 5 cut(s) 110, 492, 1159, 1170, 1316
BtgZI GCGATG 2 cut(s) 1126, 1413
BtsCI GGATG 4 cut(s) 167, 459, 1213, 1609
BtsIMutI CAGTG 1 cut(s) 684
Cac8I GCNNGC 2 cut(s) 548, 567
CciI TCATGA 2 cut(s) 667, 1096
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 1 cut(s) 1388
Cfr13I GGNCC 3 cut(s) 160, 403, 1167
Cfr42I CCGCGG 1 cut(s) 113
Csp6I GTAC 2 cut(s) 174, 1264
CspAI ACCGGT 1 cut(s) 1388
CspCI CAANNNNNGTGG 2 cut(s) 481, 516
CviQI GTAC 2 cut(s) 174, 1264
DdeI CTNAG 4 cut(s) 201, 911, 1271, 1662
DpnI GATC 4 cut(s) 580, 942, 948, 1475
DpnII GATC 4 cut(s) 578, 940, 946, 1473
EaeI YGGCCR 4 cut(s) 107, 477, 1319, 1677
EagI CGGCCG 1 cut(s) 107
Eam1104I CTCTTC 1 cut(s) 1459
EarI CTCTTC 1 cut(s) 1459
EciI GGCGGA 1 cut(s) 1302
EclXI CGGCCG 1 cut(s) 107
Eco130I CCWWGG 2 cut(s) 1159, 1316
Eco147I AGGCCT 1 cut(s) 1296
Eco24I GRGCYC 1 cut(s) 924
Eco32I GATATC 3 cut(s) 261, 291, 1510
Eco52I CGGCCG 1 cut(s) 107
Eco88I CYCGRG 1 cut(s) 211
EcoO109I RGGNCCY 1 cut(s) 160
EcoRI GAATTC 1 cut(s) 1755
EcoRII CCWGG 1 cut(s) 1296
EcoRV GATATC 3 cut(s) 261, 291, 1510
EcoT14I CCWWGG 2 cut(s) 1159, 1316
EcoT22I ATGCAT 2 cut(s) 571, 719
EcoT38I GRGCYC 1 cut(s) 924
ErhI CCWWGG 2 cut(s) 1159, 1316
FaqI GGGAC 1 cut(s) 495
FbaI TGATCA 1 cut(s) 1473
Fnu4HI GCNGC 8 cut(s) 110, 113, 198, 544, 726, 1677, 1701, 1709
FokI GGATG 4 cut(s) 154, 446, 1220, 1616
FriOI GRGCYC 1 cut(s) 924
Fsp4HI GCNGC 8 cut(s) 110, 113, 198, 544, 726, 1677, 1701, 1709
FspBI CTAG 4 cut(s) 17, 576, 833, 1783
GlaI GCGC 1 cut(s) 611
GluI GCNGC 8 cut(s) 110, 113, 198, 544, 726, 1677, 1701, 1709
GsaI CCCAGC 2 cut(s) 131, 254
GsuI CTGGAG 1 cut(s) 1319
HaeIII GGCC 9 cut(s) 109, 161, 405, 479, 524, 1169, 1296, 1321, 1679
HapII CCGG 3 cut(s) 171, 383, 1389
HhaI GCGC 1 cut(s) 612
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 2 cut(s) 807, 1132
HindII GTYRAC 2 cut(s) 807, 1132
HindIII AAGCTT 1 cut(s) 530
HinfI GANTC 5 cut(s) 395, 660, 1117, 1221, 1309
HpaI GTTAAC 1 cut(s) 807
HpaII CCGG 3 cut(s) 171, 383, 1389
HphI GGTGA 3 cut(s) 199, 508, 1423
Hpy166II GTNNAC 2 cut(s) 807, 1132
Hpy188I TCNGA 7 cut(s) 57, 265, 919, 951, 1582, 1761, 1770
Hpy188III TCNNGA 6 cut(s) 94, 218, 668, 944, 1097, 1477
Hpy8I GTNNAC 2 cut(s) 807, 1132
Hpy99I CGWCG 2 cut(s) 108, 478
HpyAV CCTTC 4 cut(s) 87, 198, 764, 981
HpyCH4III ACNGT 4 cut(s) 411, 496, 856, 1495
HpyCH4IV ACGT 1 cut(s) 468
HpyF3I CTNAG 4 cut(s) 201, 911, 1271, 1662
HpySE526I ACGT 1 cut(s) 468
HspAI GCGC 1 cut(s) 610
KpnI GGTACC 1 cut(s) 177
Ksp22I TGATCA 1 cut(s) 1473
KspAI GTTAAC 1 cut(s) 807
KspI CCGCGG 1 cut(s) 113
Kzo9I GATC 4 cut(s) 578, 940, 946, 1473
LmnI GCTCC 7 cut(s) 439, 562, 653, 749, 841, 919, 1156
Lsp1109I GCAGC 3 cut(s) 555, 712, 1720
LweI GCATC 1 cut(s) 578
MaeI CTAG 4 cut(s) 17, 576, 833, 1783
MaeII ACGT 1 cut(s) 468
MaeIII GTNAC 3 cut(s) 469, 661, 1328
MalI GATC 4 cut(s) 580, 942, 948, 1475
MbiI CCGCTC 1 cut(s) 744
MboI GATC 4 cut(s) 578, 940, 946, 1473
MboII GAAGA 4 cut(s) 591, 1476, 1667, 1703
MflI RGATCY 1 cut(s) 578
MhlI GDGCHC 1 cut(s) 924
MlsI TGGCCA 1 cut(s) 1321
MluNI TGGCCA 1 cut(s) 1321
MlyI GAGTC 2 cut(s) 669, 1318
MmeI TCCRAC 2 cut(s) 664, 1432
Mox20I TGGCCA 1 cut(s) 1321
Mph1103I ATGCAT 2 cut(s) 571, 719
MroXI GAANNNNTTC 1 cut(s) 145
MscI TGGCCA 1 cut(s) 1321
MseI TTAA 3 cut(s) 26, 528, 806
MslI CAYNNNNRTG 4 cut(s) 761, 1004, 1206, 1640
Msp20I TGGCCA 1 cut(s) 1321
MspA1I CMGCKG 1 cut(s) 112
MspI CCGG 3 cut(s) 171, 383, 1389
MspR9I CCNGG 1 cut(s) 1298
Mva1269I GAATGC 2 cut(s) 115, 717
MvaI CCWGG 1 cut(s) 1298
MvnI CGCG 3 cut(s) 112, 612, 1703
NcoI CCATGG 2 cut(s) 1159, 1316
NdeII GATC 4 cut(s) 578, 940, 946, 1473
NlaIV GGNNCC 3 cut(s) 175, 921, 1364
NmuCI GTSAC 2 cut(s) 661, 1328
NsiI ATGCAT 2 cut(s) 571, 719
NspI RCATGY 1 cut(s) 569
PaeI GCATGC 1 cut(s) 569
PagI TCATGA 2 cut(s) 667, 1096
PceI AGGCCT 1 cut(s) 1296
PctI GAATGC 2 cut(s) 115, 717
PdmI GAANNNNTTC 1 cut(s) 145
PfeI GAWTC 3 cut(s) 395, 1117, 1221
PflMI CCANNNNNTGG 1 cut(s) 683
PinAI ACCGGT 1 cut(s) 1388
PkrI GCNGC 8 cut(s) 111, 114, 199, 545, 727, 1678, 1702, 1710
PleI GAGTC 2 cut(s) 668, 1317
PpsI GAGTC 2 cut(s) 668, 1317
Ppu21I YACGTR 1 cut(s) 469
PshAI GACNNNNGTC 1 cut(s) 507
PshBI ATTAAT 1 cut(s) 26
PsiI TTATAA 1 cut(s) 1728
Psp6I CCWGG 1 cut(s) 1296
PspFI CCCAGC 2 cut(s) 127, 250
PspGI CCWGG 1 cut(s) 1296
PspN4I GGNNCC 3 cut(s) 175, 921, 1364
PspPI GGNCC 3 cut(s) 160, 403, 1167
PsuI RGATCY 1 cut(s) 578
RsaI GTAC 2 cut(s) 175, 1265
RsaNI GTAC 2 cut(s) 174, 1264
RseI CAYNNNNRTG 4 cut(s) 761, 1004, 1206, 1640
SacII CCGCGG 1 cut(s) 113
SaqAI TTAA 3 cut(s) 26, 528, 806
SatI GCNGC 8 cut(s) 110, 113, 198, 544, 726, 1677, 1701, 1709
Sau3AI GATC 4 cut(s) 578, 940, 946, 1473
Sau96I GGNCC 3 cut(s) 160, 403, 1167
SchI GAGTC 2 cut(s) 669, 1318
ScrFI CCNGG 1 cut(s) 1298
SduI GDGCHC 1 cut(s) 924
SfaNI GCATC 1 cut(s) 578
Sfr303I CCGCGG 1 cut(s) 113
SgrBI CCGCGG 1 cut(s) 113
SmiMI CAYNNNNRTG 4 cut(s) 761, 1004, 1206, 1640
SphI GCATGC 1 cut(s) 569
SseBI AGGCCT 1 cut(s) 1296
SsiI CCGC 8 cut(s) 110, 112, 195, 198, 742, 1313, 1676, 1701
SspI AATATT 1 cut(s) 955
SspMI CTAG 4 cut(s) 17, 576, 833, 1783
StuI AGGCCT 1 cut(s) 1296
StyD4I CCNGG 1 cut(s) 1296
StyI CCWWGG 2 cut(s) 1159, 1316
TaaI ACNGT 4 cut(s) 411, 496, 856, 1495
TaiI ACGT 1 cut(s) 471
TaqI TCGA 3 cut(s) 103, 1080, 1410
TauI GCSGC 5 cut(s) 112, 115, 200, 1679, 1703
TfiI GAWTC 3 cut(s) 395, 1117, 1221
Tru1I TTAA 3 cut(s) 26, 528, 806
Tru9I TTAA 3 cut(s) 26, 528, 806
TscAI CASTG 1 cut(s) 684
TseFI GTSAC 2 cut(s) 661, 1328
TseI GCWGC 3 cut(s) 543, 725, 1708
Tsp45I GTSAC 2 cut(s) 661, 1328
TspGWI ACGGA 3 cut(s) 449, 666, 745
TspRI CASTG 1 cut(s) 684
Van91I CCANNNNNTGG 1 cut(s) 683
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 7 cut(s) 97, 141, 641, 733, 1486, 1734, 1755
XceI RCATGY 1 cut(s) 569
XmnI GAANNNNTTC 1 cut(s) 145
XspI CTAG 4 cut(s) 17, 576, 833, 1783
Zsp2I ATGCAT 2 cut(s) 571, 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.