Prupe.5G190300_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Reverse (-)
15605693 .. 15607877
2185 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G190300.1

Sequence Viewer

Length: 1524 bp
ATGGCAGGATTGAGCTCCTTTGCCAAGACATCGAAGATCAAGAAATCTCTGCGCAAGATATGGGCGATGGAGAAGTCTCTGCAGGAACTGGGGGAGAACGAGAAATATCTAGCCGCTCTTTTGGCCCAGAAAATTCAACTGATCGATTTGAAGAAGTTGATTTCGAAGCAGCTTCGCCTACTACGCCCCAGTAGGGCCGACAGTCGGAAACATGGCTTGCCCATGGTTGAGAATGCATCAACGACGGTAAATCAGGGGGACGATAGATCTTTGTTTTTAATGGTAACTTTCATTAGGGGCAAATACACTAATGCCATATATGAAGTTAAATTCAAATTTGGAGGAGAAGTTGATGATATGGGTGCACAAGTAGCACGTGTAGCCAAGTTTAGTGGTTCTACCCATTTGGGTGCAAGGCTTTTCGACCGCTCCCAACTATATGTGTTTTCAGAGGAGGGTTGGGATAAACCTTGCGTTGATTCATTTGGAGGGTATATCTTTGATACAAAAACTAGGGCATTAGATCGCTTAACACCTTCTACCGTACAGTTTAAGCAGCATGGAACAGTTGTGTCGGCATATGGCACACTTTATTTTCTTGAAACCGAAACAGAATTTGTACAAGGTTCAGGCTTATTCTTTGGGAAATGCAACCCTAATAAGAAGGATTGGGTGCAAATGCCTTCGTTTCCATTTTCTTATAAGTTTACTATGGCGGTAACTGGTTATGCCGTTGGTTATGGCGTTATTTTGTATACATTGTCTGACTTGCATGGAAACTTTGATGTCGTTGCTTTTCACGTGGGTAGAAAGAATTGGAAACAAGTTGAAATTGGCACTTGTACTCCTTTCCAAGGGAGAGCCGTGGTTGTAGGTGAGACTATATATGCCTTAAATCGTTTTAAGGAGGATGAGATTATAGCATACTCCTTGAGGAGGAAGGTAGTTGATGACGGTGATATTGCATATTCACTAGTCCGGCAATTTAAATTGAACGGCCTTGACATTGCTGATCCGCCTTTGCAATTTGATGGTCTTGTGACTGACTATTTGGTTCATCTTGGGAACCAAGACTTCGTTCATGTTAAGACTGGTACTAACGAAGAATGTGATGAGGTTCAACATCTTTGTATCACCACGTTTCAAATTGTTCAAGGAATGATAGAGACCTTGCATTCAACTGTTCTTCGTGTGAAAATCGATGTTCGTAATTGGTTCAGGCTTACGCTCAGCTTTACTCCAGAATGCGGGGATTATGAACCCGAAGAAAGTAAGAGTGCAGCAAGCATGAAGCAGCCAAAACAAGAAGATGACACCACTTTGGATGAGAATTCTTTGATGCATGAGGAAGAAGCCAAACATGAAGTAGCCTTCATGCATCATGAAAAAGCAAACCAGACAAAACCCAAGAATGCAAGCGGAATAATTAAAAACAAAAGAAAAAGAAAAAGCGGATGGAAGGAGGGATTACATGTAACCAAAAAAAAAAAAGTGGGATTACAGGTAGTAGAAAACAACCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

508

Amino Acids

57.41

Weight (kDa)

8.8

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
Acc16I TGCGCA 1 cut(s) 53
AccBSI CCGCTC 2 cut(s) 116, 429
AccI GTMKAC 1 cut(s) 755
AciI CCGC 7 cut(s) 114, 427, 716, 1016, 1248, 1419, 1452
AclWI GGATC 1 cut(s) 1007
AcsI RAATTY 5 cut(s) 132, 329, 335, 614, 1330
AcvI CACGTG 2 cut(s) 377, 802
AfaI GTAC 4 cut(s) 546, 621, 844, 1096
AfiI CCNNNNNNNGG 5 cut(s) 193, 204, 854, 936, 1247
AflIII ACRYGT 2 cut(s) 376, 1471
AhlI ACTAGT 1 cut(s) 973
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
AluBI AGCT 3 cut(s) 15, 172, 1233
AluI AGCT 3 cut(s) 15, 172, 1233
Alw21I GWGCWC 2 cut(s) 17, 367
Alw26I GTCTC 3 cut(s) 81, 872, 1160
Alw44I GTGCAC 1 cut(s) 363
AlwI GGATC 1 cut(s) 1007
AlwNI CAGNNNCTG 1 cut(s) 88
AoxI GGCC 3 cut(s) 123, 195, 997
ApaLI GTGCAC 1 cut(s) 363
ApeKI GCWGC 4 cut(s) 169, 556, 1280, 1294
ApoI RAATTY 5 cut(s) 132, 329, 335, 614, 1330
ArsI GACNNNNNNTTYG 2 cut(s) 1033, 1065
AspLEI GCGC 1 cut(s) 54
AspS9I GGNCC 2 cut(s) 124, 195
AsuHPI GGTGA 3 cut(s) 887, 968, 1126
AsuII TTCGAA 1 cut(s) 164
BaeGI GKGCMC 1 cut(s) 367
BanII GRGCYC 1 cut(s) 17
BbrPI CACGTG 2 cut(s) 377, 802
Bbv12I GWGCWC 2 cut(s) 17, 367
BbvI GCAGC 4 cut(s) 181, 568, 1292, 1306
BccI CCATC 3 cut(s) 61, 1025, 1449
BceAI ACGGC 3 cut(s) 716, 848, 1012
BcoDI GTCTC 3 cut(s) 81, 872, 1160
BcuI ACTAGT 1 cut(s) 973
BfaI CTAG 3 cut(s) 110, 513, 974
BfmI CTRYAG 1 cut(s) 80
BglII AGATCT 1 cut(s) 266
BisI GCNGC 5 cut(s) 114, 170, 557, 1281, 1295
BlpI GCTNAGC 1 cut(s) 1229
BlsI GCNGC 5 cut(s) 115, 171, 558, 1282, 1296
BmgT120I GGNCC 2 cut(s) 124, 195
BmiI GGNNCC 1 cut(s) 1067
BmrI ACTGGG 2 cut(s) 98, 183
BmsI GCATC 3 cut(s) 245, 1329, 1387
BmuI ACTGGG 2 cut(s) 98, 183
BpmI CTGGAG 1 cut(s) 1224
Bpu1102I GCTNAGC 1 cut(s) 1229
Bpu14I TTCGAA 1 cut(s) 164
BpuEI CTTGAG 1 cut(s) 952
Bsa29I ATCGAT 2 cut(s) 144, 1200
BsaAI YACGTR 2 cut(s) 377, 802
BsaI GGTCTC 1 cut(s) 1160
BsaJI CCNNGG 3 cut(s) 222, 853, 864
BsaXI ACNNNNNCTCC 4 cut(s) 333, 363, 829, 859
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 204, 854, 936, 1247
Bse1I ACTGG 4 cut(s) 93, 189, 727, 1096
Bse3DI GCAATG 1 cut(s) 1005
BseCI ATCGAT 2 cut(s) 144, 1200
BseDI CCNNGG 3 cut(s) 222, 853, 864
BseGI GGATG 3 cut(s) 916, 1330, 1460
BseLI CCNNNNNNNGG 5 cut(s) 193, 204, 854, 936, 1247
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 1 cut(s) 1243
BseNI ACTGG 4 cut(s) 93, 189, 727, 1096
BseRI GAGGAG 3 cut(s) 357, 467, 949
BseSI GKGCMC 1 cut(s) 367
BseXI GCAGC 4 cut(s) 181, 568, 1292, 1306
BsgI GTGCAG 1 cut(s) 1299
Bsh1285I CGRYCG 1 cut(s) 427
BshFI GGCC 3 cut(s) 125, 197, 999
BshVI ATCGAT 2 cut(s) 144, 1200
BsiEI CGRYCG 1 cut(s) 427
BsiHKAI GWGCWC 2 cut(s) 17, 367
BsiSI CCGG 1 cut(s) 979
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 5 cut(s) 193, 204, 854, 936, 1247
BsmAI GTCTC 3 cut(s) 81, 872, 1160
BsmFI GGGAC 1 cut(s) 272
BsmI GAATGC 4 cut(s) 238, 1174, 1250, 1417
BsnI GGCC 3 cut(s) 125, 197, 999
Bso31I GGTCTC 1 cut(s) 1160
Bsp119I TTCGAA 1 cut(s) 164
Bsp1286I GDGCHC 2 cut(s) 17, 367
Bsp1407I TGTACA 1 cut(s) 619
Bsp143I GATC 5 cut(s) 36, 141, 266, 523, 1012
Bsp1720I GCTNAGC 1 cut(s) 1229
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 7 cut(s) 114, 427, 716, 1016, 1248, 1419, 1452
BspANI GGCC 3 cut(s) 125, 197, 999
BspCNI CTCAG 1 cut(s) 1242
BspDI ATCGAT 2 cut(s) 144, 1200
BspHI TCATGA 1 cut(s) 1381
BspLI GGNNCC 1 cut(s) 1067
BspMAI CTGCAG 1 cut(s) 84
BspPI GGATC 1 cut(s) 1007
BspT104I TTCGAA 1 cut(s) 164
BspTNI GGTCTC 1 cut(s) 1160
BsrBI CCGCTC 2 cut(s) 116, 429
BsrDI GCAATG 1 cut(s) 1005
BsrGI TGTACA 1 cut(s) 619
BsrI ACTGG 4 cut(s) 93, 189, 727, 1096
BssECI CCNNGG 3 cut(s) 222, 853, 864
BssMI GATC 5 cut(s) 36, 141, 266, 523, 1012
BssNAI GTATAC 1 cut(s) 756
BssT1I CCWWGG 2 cut(s) 222, 853
Bst1107I GTATAC 1 cut(s) 756
Bst4CI ACNGT 7 cut(s) 203, 247, 544, 549, 568, 956, 1183
BstAUI TGTACA 1 cut(s) 619
BstBAI YACGTR 2 cut(s) 377, 802
BstBI TTCGAA 1 cut(s) 164
BstC8I GCNNGC 3 cut(s) 218, 1285, 1417
BstDEI CTNAG 1 cut(s) 1229
BstDSI CCRYGG 2 cut(s) 222, 864
BstENI CCTNNNNNAGG 2 cut(s) 852, 934
BstF5I GGATG 3 cut(s) 916, 1330, 1460
BstHHI GCGC 1 cut(s) 54
BstKTI GATC 5 cut(s) 39, 144, 269, 526, 1015
BstMAI GTCTC 3 cut(s) 81, 872, 1160
BstMBI GATC 5 cut(s) 36, 141, 266, 523, 1012
BstMCI CGRYCG 1 cut(s) 427
BstMWI GCNNNNNNNGC 4 cut(s) 122, 183, 371, 380
BstNSI RCATGY 1 cut(s) 1475
BstSFI CTRYAG 1 cut(s) 80
BstSLI GKGCMC 1 cut(s) 367
BstV1I GCAGC 4 cut(s) 181, 568, 1292, 1306
BstX2I RGATCY 1 cut(s) 266
BstYI RGATCY 1 cut(s) 266
BstZ17I GTATAC 1 cut(s) 756
Bsu15I ATCGAT 2 cut(s) 144, 1200
BsuRI GGCC 3 cut(s) 125, 197, 999
BsuTUI ATCGAT 2 cut(s) 144, 1200
BtgI CCRYGG 2 cut(s) 222, 864
BtgZI GCGATG 1 cut(s) 80
BtsCI GGATG 3 cut(s) 916, 1330, 1460
Cac8I GCNNGC 3 cut(s) 218, 1285, 1417
CaiI CAGNNNCTG 1 cut(s) 88
CciI TCATGA 1 cut(s) 1381
CfoI GCGC 1 cut(s) 54
Cfr13I GGNCC 2 cut(s) 124, 195
ClaI ATCGAT 2 cut(s) 144, 1200
Csp6I GTAC 4 cut(s) 545, 620, 843, 1095
CspCI CAANNNNNGTGG 2 cut(s) 373, 408
CviQI GTAC 4 cut(s) 545, 620, 843, 1095
DdeI CTNAG 1 cut(s) 1229
DpnI GATC 5 cut(s) 38, 143, 268, 525, 1014
DpnII GATC 5 cut(s) 36, 141, 266, 523, 1012
DraI TTTAAA 1 cut(s) 988
EciI GGCGGA 1 cut(s) 1005
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 2 cut(s) 222, 853
Eco24I GRGCYC 1 cut(s) 17
Eco31I GGTCTC 1 cut(s) 1160
Eco53kI GAGCTC 1 cut(s) 15
Eco72I CACGTG 2 cut(s) 377, 802
EcoICRI GAGCTC 1 cut(s) 15
EcoNI CCTNNNNNAGG 2 cut(s) 852, 934
EcoRI GAATTC 1 cut(s) 1330
EcoT14I CCWWGG 2 cut(s) 222, 853
EcoT22I ATGCAT 3 cut(s) 238, 1344, 1380
EcoT38I GRGCYC 1 cut(s) 17
ErhI CCWWGG 2 cut(s) 222, 853
FaqI GGGAC 1 cut(s) 272
FauI CCCGC 1 cut(s) 1241
FauNDI CATATG 1 cut(s) 580
FblI GTMKAC 1 cut(s) 755
Fnu4HI GCNGC 5 cut(s) 114, 170, 557, 1281, 1295
FokI GGATG 3 cut(s) 923, 1337, 1467
FriOI GRGCYC 1 cut(s) 17
Fsp4HI GCNGC 5 cut(s) 114, 170, 557, 1281, 1295
FspBI CTAG 3 cut(s) 110, 513, 974
FspI TGCGCA 1 cut(s) 53
GlaI GCGC 1 cut(s) 53
GluI GCNGC 5 cut(s) 114, 170, 557, 1281, 1295
GsuI CTGGAG 1 cut(s) 1224
HaeIII GGCC 3 cut(s) 125, 197, 999
HapII CCGG 1 cut(s) 979
HhaI GCGC 1 cut(s) 54
Hin6I GCGC 1 cut(s) 52
HinP1I GCGC 1 cut(s) 52
HinfI GANTC 1 cut(s) 479
HpaII CCGG 1 cut(s) 979
HphI GGTGA 3 cut(s) 887, 968, 1126
Hpy166II GTNNAC 3 cut(s) 365, 708, 756
Hpy188I TCNGA 3 cut(s) 207, 451, 766
Hpy188III TCNNGA 4 cut(s) 40, 599, 1241, 1382
Hpy8I GTNNAC 3 cut(s) 365, 708, 756
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 6 cut(s) 546, 658, 693, 934, 1381, 1453
HpyCH4III ACNGT 7 cut(s) 203, 247, 544, 549, 568, 956, 1183
HpyCH4IV ACGT 3 cut(s) 376, 801, 1139
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 183, 371, 380
HpyF3I CTNAG 1 cut(s) 1229
HpySE526I ACGT 3 cut(s) 376, 801, 1139
HspAI GCGC 1 cut(s) 52
Kzo9I GATC 5 cut(s) 36, 141, 266, 523, 1012
LmnI GCTCC 2 cut(s) 20, 434
Lsp1109I GCAGC 4 cut(s) 181, 568, 1292, 1306
LweI GCATC 3 cut(s) 245, 1329, 1387
MaeI CTAG 3 cut(s) 110, 513, 974
MaeII ACGT 3 cut(s) 376, 801, 1139
MaeIII GTNAC 4 cut(s) 283, 718, 1039, 1474
MalI GATC 5 cut(s) 38, 143, 268, 525, 1014
MbiI CCGCTC 2 cut(s) 116, 429
MboI GATC 5 cut(s) 36, 141, 266, 523, 1012
MboII GAAGA 7 cut(s) 46, 163, 1115, 1178, 1277, 1319, 1361
MflI RGATCY 1 cut(s) 266
MhlI GDGCHC 2 cut(s) 17, 367
MmeI TCCRAC 1 cut(s) 185
Mph1103I ATGCAT 3 cut(s) 238, 1344, 1380
MseI TTAA 9 cut(s) 278, 327, 530, 552, 893, 903, 987, 1086, 1428
MslI CAYNNNNRTG 1 cut(s) 408
MspI CCGG 1 cut(s) 979
Mva1269I GAATGC 4 cut(s) 238, 1174, 1250, 1417
MwoI GCNNNNNNNGC 4 cut(s) 122, 183, 371, 380
NcoI CCATGG 1 cut(s) 222
NdeI CATATG 1 cut(s) 580
NdeII GATC 5 cut(s) 36, 141, 266, 523, 1012
NlaIV GGNNCC 1 cut(s) 1067
NmuCI GTSAC 1 cut(s) 1039
NsbI TGCGCA 1 cut(s) 53
NsiI ATGCAT 3 cut(s) 238, 1344, 1380
NspI RCATGY 1 cut(s) 1475
NspV TTCGAA 1 cut(s) 164
PagI TCATGA 1 cut(s) 1381
PciI ACATGT 1 cut(s) 1471
PctI GAATGC 4 cut(s) 238, 1174, 1250, 1417
PfeI GAWTC 1 cut(s) 479
PkrI GCNGC 5 cut(s) 115, 171, 558, 1282, 1296
PmaCI CACGTG 2 cut(s) 377, 802
PmlI CACGTG 2 cut(s) 377, 802
Ppu21I YACGTR 2 cut(s) 377, 802
PscI ACATGT 1 cut(s) 1471
PsiI TTATAA 1 cut(s) 702
Psp124BI GAGCTC 1 cut(s) 17
PspCI CACGTG 2 cut(s) 377, 802
PspN4I GGNNCC 1 cut(s) 1067
PspPI GGNCC 2 cut(s) 124, 195
PstI CTGCAG 1 cut(s) 84
PstNI CAGNNNCTG 1 cut(s) 88
PsuI RGATCY 1 cut(s) 266
RsaI GTAC 4 cut(s) 546, 621, 844, 1096
RsaNI GTAC 4 cut(s) 545, 620, 843, 1095
RseI CAYNNNNRTG 1 cut(s) 408
SacI GAGCTC 1 cut(s) 17
SaqAI TTAA 9 cut(s) 278, 327, 530, 552, 893, 903, 987, 1086, 1428
SatI GCNGC 5 cut(s) 114, 170, 557, 1281, 1295
Sau3AI GATC 5 cut(s) 36, 141, 266, 523, 1012
Sau96I GGNCC 2 cut(s) 124, 195
SduI GDGCHC 2 cut(s) 17, 367
SfaNI GCATC 3 cut(s) 245, 1329, 1387
SfcI CTRYAG 1 cut(s) 80
SfuI TTCGAA 1 cut(s) 164
SmiI ATTTAAAT 1 cut(s) 988
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 1 cut(s) 931
SmoI CTYRAG 1 cut(s) 931
SpeI ACTAGT 1 cut(s) 973
SsiI CCGC 7 cut(s) 114, 427, 716, 1016, 1248, 1419, 1452
SspMI CTAG 3 cut(s) 110, 513, 974
SstI GAGCTC 1 cut(s) 17
StyI CCWWGG 2 cut(s) 222, 853
SwaI ATTTAAAT 1 cut(s) 988
TaaI ACNGT 7 cut(s) 203, 247, 544, 549, 568, 956, 1183
TaiI ACGT 3 cut(s) 379, 804, 1142
TaqI TCGA 5 cut(s) 32, 144, 164, 423, 1200
TatI WGTACW 2 cut(s) 619, 842
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 1 cut(s) 479
Tru1I TTAA 9 cut(s) 278, 327, 530, 552, 893, 903, 987, 1086, 1428
Tru9I TTAA 9 cut(s) 278, 327, 530, 552, 893, 903, 987, 1086, 1428
TseFI GTSAC 1 cut(s) 1039
TseI GCWGC 4 cut(s) 169, 556, 1280, 1294
Tsp45I GTSAC 1 cut(s) 1039
VneI GTGCAC 1 cut(s) 363
XagI CCTNNNNNAGG 2 cut(s) 852, 934
XapI RAATTY 5 cut(s) 132, 329, 335, 614, 1330
XceI RCATGY 1 cut(s) 1475
XmiI GTMKAC 1 cut(s) 755
XspI CTAG 3 cut(s) 110, 513, 974
Zsp2I ATGCAT 3 cut(s) 238, 1344, 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.