Prupe.5G196700_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000150
Physical Location & Seq
Forward (+)
15932124 .. 15934859
2736 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G196700.1

Sequence Viewer

Length: 1728 bp
ATGGTGTATTGGAAAAAATCTCAACCTTCCGCTGCCGCCGCTGATCTCACCTCCGATCAAGGCCATGCTTTGACGACGGCTTCACTCCAACATGATCTCCATGGGAAGTTACAGGAGATGGAGAAATCTCTAGGCAAGATATCGGAGATCGAGAAAACCCAAAAGTTCGAATTGCAAACATTAATATTGGAGCTGCTTCGCTTACTAAGCGAAAGTAGTGGTTGCCCCCTTCAACCTGGCAGTCACATGCCGGCAATCACCTTGACGATGGCTTCCGCAGCTGAGCCCACCCCTCGTCAATCGGAAGTGATGAAATCTCTAGCCGAGCTTTCCGCCCAGCAGAAATCCATAATGGAGGAGCTTCGCCTGATGCGCACCATTATTGCTAGCCCCAGTCAATCCCAAAGGACGACTCCAAACTTCACGGAGATTTACGAAACTCCAAGCCTTGAACCCTTTAATCCTTTCCCAAGCTTTCCCATGGTGCCACCAACGACAATAAATCAAGGGGAAGATAGATCTGTATATTTATTTGTGTCCTTTTATGATGGCCAATATACTGATGCAATCTATCAAGTGACGTTCAAACACGGAGGAGGAGTCACTCATGAACCCCCATTTGTTGAAGTTGAGGATGAGTTCTCTAATGGTTTTTACATTCAGGGTGCAAGAATTTTCAACCGCTCCGAATTATACATCCTTCTACAGGGAGGTTATAATAACCCTCTCCTGGGGGATTCTTCCAAGTCATTCGGATATATTATTAACACGGAGATTGGGTCATATTATTCATCTCTTCCTCCCAATCTAGCCTCTAAACCATTAGCAACTCTTGTGTCTGCGTATGACAAGCTTTACTATGTTGCATCTCCAGCATGCTTACAACCAATTACGGAACCGTCCTTCGAGAGATATGATCCTGAGCAAGACATTTGGGAGCGAATGCCTTCTTTTCCATTTTATCGTGATGATGGCCGTATGGAAATAATTGGTTATGCCGTTTGTTATGGTGTTATTTTGTTTTCATTGTGGGACTCCGACATGAATCTCGATGTTGTTGCTTTTCATGAGAGTAGAAACCAATGGAATAGAGTGACTTTTGCTTCTTATGCTCCTTTCCGAGGGAGGGCCGTGGTTGTAGGCAACACTATCTATGCCTTACATGCACTTATGGTGGAGGAGATTATAGCATTCTCCTTTAGGATGGACAAAGGTGATCACGGTGGCATTGCATATTCCCTAAGCCCACTGTTTATATTGCGTGGTCTGGAGATTGCGTGTCCGCCAGTGCCATTTTGTGAGCTTAATACAGGGTATTTGGTTCATTTGGGTAACCATGACTTTTTTCATGTGAAGACTGGCAGTCCCAATAGTGAAGCACATCCCAAGGTTCAATATCTTTGTATCACCATGTTTCAAATTGTTGTTGAAGGAGGAAAACATATGATCAAGACCATAAATTCAACTGTTCATCCTATGGATGTCAAGGGTCGTGATTGGTTCTTCCTTGAGTTCTGCTTCACGCCTGAGTGCGGGGATTATGAACCCATAGAAGGGGACATTGTGACTAGAATAAATCAGCCAAAAGAAGAAGAAACCACTCTGGAGACAACTCAGGATGAGACTTTTTCTATGTGGGAGGTGACTCGTAGTGAGGTTCTTGCTCGCCAATGTCAAAGAAAGAGGCCAAGAAAGAAGCCAAGCTGGAGTAACCGCCATGTAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

576

Amino Acids

65.1

Weight (kDa)

5.3

Isoelectric Point (pI)

53.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 717
Acc16I TGCGCA 1 cut(s) 374
AccB1I GGYRCC 1 cut(s) 484
AccBSI CCGCTC 1 cut(s) 684
AciI CCGC 9 cut(s) 30, 36, 39, 276, 333, 682, 1283, 1533, 1714
AclWI GGATC 1 cut(s) 911
AcoI YGGCCR 2 cut(s) 550, 973
AcsI RAATTY 2 cut(s) 672, 1459
AfiI CCNNNNNNNGG 8 cut(s) 706, 730, 731, 1121, 1126, 1532, 1553, 1554
AgsI TTSAA 9 cut(s) 233, 452, 586, 626, 679, 1394, 1418, 1430, 1464
AhdI GACNNNNNGTC 1 cut(s) 1362
AjnI CCWGG 2 cut(s) 235, 729
AluBI AGCT 8 cut(s) 193, 281, 328, 361, 474, 853, 1303, 1704
AluI AGCT 8 cut(s) 193, 281, 328, 361, 474, 853, 1303, 1704
Alw26I GTCTC 2 cut(s) 1601, 1616
AlwI GGATC 1 cut(s) 911
AoxI GGCC 5 cut(s) 61, 550, 973, 1128, 1685
ApeKI GCWGC 3 cut(s) 32, 193, 278
ApoI RAATTY 2 cut(s) 672, 1459
AseI ATTAAT 1 cut(s) 182
Asp700I GAANNNNTTC 1 cut(s) 946
AspLEI GCGC 1 cut(s) 375
AspS9I GGNCC 1 cut(s) 1128
AsuHPI GGTGA 5 cut(s) 40, 250, 1226, 1399, 1654
AsuII TTCGAA 1 cut(s) 168
AsuNHI GCTAGC 1 cut(s) 386
BalI TGGCCA 1 cut(s) 552
BanI GGYRCC 1 cut(s) 484
BanII GRGCYC 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 1361
BbvI GCAGC 3 cut(s) 19, 180, 290
BccI CCATC 5 cut(s) 112, 262, 542, 965, 1198
BceAI ACGGC 4 cut(s) 93, 960, 983, 1115
BcgI CGANNNNNNTGC 2 cut(s) 1040, 1074
BciT130I CCWGG 2 cut(s) 237, 731
BclI TGATCA 2 cut(s) 1216, 1446
BcoDI GTCTC 2 cut(s) 1601, 1616
BfaI CTAG 5 cut(s) 131, 320, 387, 809, 1569
BfmI CTRYAG 1 cut(s) 704
BglII AGATCT 1 cut(s) 518
BisI GCNGC 5 cut(s) 33, 36, 39, 194, 279
BlpI GCTNAGC 1 cut(s) 282
BlsI GCNGC 5 cut(s) 34, 37, 40, 195, 280
Bme1390I CCNGG 2 cut(s) 237, 731
BmeRI GACNNNNNGTC 1 cut(s) 1362
BmgT120I GGNCC 1 cut(s) 1128
BmiI GGNNCC 2 cut(s) 486, 897
BmrFI CCNGG 2 cut(s) 237, 731
BmrI ACTGGG 1 cut(s) 387
BmsI GCATC 3 cut(s) 360, 553, 875
BmtI GCTAGC 1 cut(s) 390
BmuI ACTGGG 1 cut(s) 387
BpiI GAAGAC 1 cut(s) 1361
BpmI CTGGAG 4 cut(s) 855, 1289, 1625, 1726
Bpu10I CCTNAGC 2 cut(s) 921, 1241
Bpu1102I GCTNAGC 1 cut(s) 282
Bpu14I TTCGAA 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 1529
BsaJI CCNNGG 6 cut(s) 100, 480, 730, 1120, 1131, 1386
BsaXI ACNNNNNCTCC 8 cut(s) 81, 111, 585, 615, 764, 794, 1262, 1292
Bsc4I CCNNNNNNNGG 8 cut(s) 706, 730, 731, 1121, 1126, 1532, 1553, 1554
Bse118I RCCGGY 1 cut(s) 250
Bse1I ACTGG 3 cut(s) 393, 1286, 1363
Bse3DI GCAATG 1 cut(s) 1227
BseBI CCWGG 2 cut(s) 237, 731
BseDI CCNNGG 6 cut(s) 100, 480, 730, 1120, 1131, 1386
BseGI GGATG 7 cut(s) 640, 696, 1209, 1381, 1471, 1486, 1624
BseLI CCNNNNNNNGG 8 cut(s) 706, 730, 731, 1121, 1126, 1532, 1553, 1554
BseMI GCAATG 1 cut(s) 1227
BseMII CTCAG 4 cut(s) 273, 912, 1518, 1628
BseNI ACTGG 3 cut(s) 393, 1286, 1363
BseRI GAGGAG 4 cut(s) 371, 609, 612, 1193
BseXI GCAGC 3 cut(s) 19, 180, 290
BseYI CCCAGC 1 cut(s) 336
BshFI GGCC 5 cut(s) 63, 552, 975, 1130, 1687
BshNI GGYRCC 1 cut(s) 484
BsiSI CCGG 1 cut(s) 251
BslFI GGGAC 3 cut(s) 1046, 1350, 1571
BslI CCNNNNNNNGG 8 cut(s) 706, 730, 731, 1121, 1126, 1532, 1553, 1554
BsmAI GTCTC 2 cut(s) 1601, 1616
BsmFI GGGAC 3 cut(s) 1046, 1350, 1571
BsmI GAATGC 2 cut(s) 948, 1190
BsnI GGCC 5 cut(s) 63, 552, 975, 1130, 1687
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
Bsp1720I GCTNAGC 1 cut(s) 282
Bsp19I CCATGG 2 cut(s) 100, 480
BspACI CCGC 9 cut(s) 30, 36, 39, 276, 333, 682, 1283, 1533, 1714
BspANI GGCC 5 cut(s) 63, 552, 975, 1130, 1687
BspCNI CTCAG 4 cut(s) 274, 913, 1519, 1627
BspHI TCATGA 2 cut(s) 607, 1066
BspLI GGNNCC 2 cut(s) 486, 897
BspOI GCTAGC 1 cut(s) 390
BspPI GGATC 1 cut(s) 911
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 484
BsrBI CCGCTC 1 cut(s) 684
BsrDI GCAATG 1 cut(s) 1227
BsrFI RCCGGY 1 cut(s) 250
BsrI ACTGG 3 cut(s) 393, 1286, 1363
BssAI RCCGGY 1 cut(s) 250
BssECI CCNNGG 6 cut(s) 100, 480, 730, 1120, 1131, 1386
BssMI GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
BssT1I CCWWGG 3 cut(s) 100, 480, 1386
Bst2UI CCWGG 2 cut(s) 237, 731
Bst4CI ACNGT 4 cut(s) 900, 1223, 1251, 1468
Bst6I CTCTTC 1 cut(s) 801
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 4 cut(s) 252, 388, 877, 1666
BstDEI CTNAG 6 cut(s) 206, 282, 921, 1241, 1527, 1614
BstDSI CCRYGG 3 cut(s) 100, 480, 1131
BstEII GGTNACC 1 cut(s) 1331
BstENI CCTNNNNNAGG 2 cut(s) 704, 1119
BstF5I GGATG 7 cut(s) 640, 696, 1209, 1381, 1471, 1486, 1624
BstHHI GCGC 1 cut(s) 375
BstKTI GATC 8 cut(s) 46, 58, 97, 150, 521, 919, 1219, 1449
BstMAI GTCTC 2 cut(s) 1601, 1616
BstMBI GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
BstMWI GCNNNNNNNGC 7 cut(s) 38, 207, 278, 372, 872, 1109, 1163
BstNI CCWGG 2 cut(s) 237, 731
BstNSI RCATGY 3 cut(s) 250, 879, 1166
BstPI GGTNACC 1 cut(s) 1331
BstSCI CCNGG 2 cut(s) 235, 729
BstSFI CTRYAG 1 cut(s) 704
BstV1I GCAGC 3 cut(s) 19, 180, 290
BstV2I GAAGAC 1 cut(s) 1361
BstX2I RGATCY 1 cut(s) 518
BstYI RGATCY 1 cut(s) 518
BsuRI GGCC 5 cut(s) 63, 552, 975, 1130, 1687
BtgI CCRYGG 3 cut(s) 100, 480, 1131
BtsCI GGATG 7 cut(s) 640, 696, 1209, 1381, 1471, 1486, 1624
BtsIMutI CAGTG 2 cut(s) 1247, 1293
Cac8I GCNNGC 4 cut(s) 252, 388, 877, 1666
CciI TCATGA 2 cut(s) 607, 1066
CfoI GCGC 1 cut(s) 375
Cfr10I RCCGGY 1 cut(s) 250
Cfr13I GGNCC 1 cut(s) 1128
DdeI CTNAG 6 cut(s) 206, 282, 921, 1241, 1527, 1614
DpnI GATC 8 cut(s) 45, 57, 96, 149, 520, 918, 1218, 1448
DpnII GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
DriI GACNNNNNGTC 1 cut(s) 1362
EaeI YGGCCR 2 cut(s) 550, 973
Eam1104I CTCTTC 1 cut(s) 801
Eam1105I GACNNNNNGTC 1 cut(s) 1362
EarI CTCTTC 1 cut(s) 801
EciI GGCGGA 2 cut(s) 322, 1272
Eco130I CCWWGG 3 cut(s) 100, 480, 1386
Eco24I GRGCYC 1 cut(s) 288
Eco32I GATATC 1 cut(s) 141
Eco91I GGTNACC 1 cut(s) 1331
EcoNI CCTNNNNNAGG 2 cut(s) 704, 1119
EcoO65I GGTNACC 1 cut(s) 1331
EcoRII CCWGG 2 cut(s) 235, 729
EcoRV GATATC 1 cut(s) 141
EcoT14I CCWWGG 3 cut(s) 100, 480, 1386
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 3 cut(s) 100, 480, 1386
FaqI GGGAC 3 cut(s) 1046, 1350, 1571
FauI CCCGC 1 cut(s) 1526
FauNDI CATATG 1 cut(s) 1443
FbaI TGATCA 2 cut(s) 1216, 1446
Fnu4HI GCNGC 5 cut(s) 33, 36, 39, 194, 279
FokI GGATG 7 cut(s) 647, 683, 1216, 1368, 1458, 1493, 1631
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 5 cut(s) 33, 36, 39, 194, 279
FspAI RTGCGCAY 1 cut(s) 374
FspBI CTAG 5 cut(s) 131, 320, 387, 809, 1569
FspI TGCGCA 1 cut(s) 374
GlaI GCGC 1 cut(s) 374
GluI GCNGC 5 cut(s) 33, 36, 39, 194, 279
GsaI CCCAGC 1 cut(s) 340
GsuI CTGGAG 4 cut(s) 855, 1289, 1625, 1726
HaeIII GGCC 5 cut(s) 63, 552, 975, 1130, 1687
HapII CCGG 1 cut(s) 251
HhaI GCGC 1 cut(s) 375
Hin6I GCGC 1 cut(s) 373
HinP1I GCGC 1 cut(s) 373
HindIII AAGCTT 2 cut(s) 472, 851
HinfI GANTC 6 cut(s) 412, 600, 737, 1034, 1045, 1645
HpaII CCGG 1 cut(s) 251
HphI GGTGA 5 cut(s) 40, 250, 1226, 1399, 1654
Hpy188I TCNGA 7 cut(s) 55, 145, 304, 688, 755, 1039, 1121
Hpy99I CGWCG 1 cut(s) 79
HpyAV CCTTC 7 cut(s) 36, 239, 710, 913, 957, 1424, 1547
HpyCH4III ACNGT 4 cut(s) 900, 1223, 1251, 1468
HpyCH4IV ACGT 1 cut(s) 581
HpyCH4V TGCA 6 cut(s) 175, 566, 668, 866, 1166, 1232
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 207, 278, 372, 872, 1109, 1163
HpyF3I CTNAG 6 cut(s) 206, 282, 921, 1241, 1527, 1614
HpySE526I ACGT 1 cut(s) 581
HspAI GCGC 1 cut(s) 373
KroI GCCGGC 1 cut(s) 250
KroNI GCCGGC 1 cut(s) 252
Ksp22I TGATCA 2 cut(s) 1216, 1446
Kzo9I GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
LmnI GCTCC 5 cut(s) 190, 358, 689, 937, 1117
Lsp1109I GCAGC 3 cut(s) 19, 180, 290
LweI GCATC 3 cut(s) 360, 553, 875
MaeI CTAG 5 cut(s) 131, 320, 387, 809, 1569
MaeII ACGT 1 cut(s) 581
MaeIII GTNAC 9 cut(s) 108, 242, 577, 601, 1093, 1331, 1564, 1642, 1709
MalI GATC 8 cut(s) 45, 57, 96, 149, 520, 918, 1218, 1448
MbiI CCGCTC 1 cut(s) 684
MboI GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
MboII GAAGA 7 cut(s) 524, 732, 788, 1366, 1495, 1601, 1604
MflI RGATCY 1 cut(s) 518
MhlI GDGCHC 1 cut(s) 288
MlsI TGGCCA 1 cut(s) 552
MluCI AATT 7 cut(s) 170, 672, 689, 888, 987, 1419, 1459
MluNI TGGCCA 1 cut(s) 552
MlyI GAGTC 4 cut(s) 406, 609, 1028, 1639
MmeI TCCRAC 2 cut(s) 112, 1062
Mox20I TGGCCA 1 cut(s) 552
MroNI GCCGGC 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 946
MscI TGGCCA 1 cut(s) 552
MseI TTAA 4 cut(s) 182, 459, 765, 1305
Msp20I TGGCCA 1 cut(s) 552
MspA1I CMGCKG 3 cut(s) 32, 41, 281
MspI CCGG 1 cut(s) 251
MspR9I CCNGG 2 cut(s) 237, 731
Mva1269I GAATGC 2 cut(s) 948, 1190
MvaI CCWGG 2 cut(s) 237, 731
MwoI GCNNNNNNNGC 7 cut(s) 38, 207, 278, 372, 872, 1109, 1163
NaeI GCCGGC 1 cut(s) 252
NcoI CCATGG 2 cut(s) 100, 480
NdeI CATATG 1 cut(s) 1443
NdeII GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
NgoMIV GCCGGC 1 cut(s) 250
NheI GCTAGC 1 cut(s) 386
NlaIV GGNNCC 2 cut(s) 486, 897
NmeAIII GCCGAG 1 cut(s) 349
NmuCI GTSAC 6 cut(s) 242, 577, 601, 1093, 1564, 1642
NsbI TGCGCA 1 cut(s) 374
NspI RCATGY 3 cut(s) 250, 879, 1166
NspV TTCGAA 1 cut(s) 168
PaeI GCATGC 1 cut(s) 879
PagI TCATGA 2 cut(s) 607, 1066
PctI GAATGC 2 cut(s) 948, 1190
PdiI GCCGGC 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 946
PfeI GAWTC 2 cut(s) 737, 1045
PkrI GCNGC 5 cut(s) 34, 37, 40, 195, 280
PleI GAGTC 4 cut(s) 406, 608, 1028, 1639
PpsI GAGTC 4 cut(s) 406, 608, 1028, 1639
PshBI ATTAAT 1 cut(s) 182
PsiI TTATAA 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 235, 729
PspEI GGTNACC 1 cut(s) 1331
PspFI CCCAGC 1 cut(s) 336
PspGI CCWGG 2 cut(s) 235, 729
PspN4I GGNNCC 2 cut(s) 486, 897
PspPI GGNCC 1 cut(s) 1128
PsuI RGATCY 1 cut(s) 518
PvuII CAGCTG 1 cut(s) 281
SaqAI TTAA 4 cut(s) 182, 459, 765, 1305
SatI GCNGC 5 cut(s) 33, 36, 39, 194, 279
Sau3AI GATC 8 cut(s) 43, 55, 94, 147, 518, 916, 1216, 1446
Sau96I GGNCC 1 cut(s) 1128
SchI GAGTC 4 cut(s) 406, 609, 1028, 1639
ScrFI CCNGG 2 cut(s) 237, 731
SduI GDGCHC 1 cut(s) 288
SfaNI GCATC 3 cut(s) 360, 553, 875
SfcI CTRYAG 1 cut(s) 704
SfuI TTCGAA 1 cut(s) 168
SmlI CTYRAG 1 cut(s) 1508
SmoI CTYRAG 1 cut(s) 1508
SphI GCATGC 1 cut(s) 879
Sse9I AATT 7 cut(s) 170, 672, 689, 888, 987, 1419, 1459
SsiI CCGC 9 cut(s) 30, 36, 39, 276, 333, 682, 1283, 1533, 1714
SspI AATATT 1 cut(s) 186
SspMI CTAG 5 cut(s) 131, 320, 387, 809, 1569
StyD4I CCNGG 2 cut(s) 235, 729
StyI CCWWGG 3 cut(s) 100, 480, 1386
TaaI ACNGT 4 cut(s) 900, 1223, 1251, 1468
TaiI ACGT 1 cut(s) 584
TaqI TCGA 4 cut(s) 150, 168, 906, 1050
TasI AATT 7 cut(s) 170, 672, 689, 888, 987, 1419, 1459
TauI GCSGC 2 cut(s) 38, 41
TfiI GAWTC 2 cut(s) 737, 1045
Tru1I TTAA 4 cut(s) 182, 459, 765, 1305
Tru9I TTAA 4 cut(s) 182, 459, 765, 1305
TscAI CASTG 2 cut(s) 1254, 1293
TseFI GTSAC 6 cut(s) 242, 577, 601, 1093, 1564, 1642
TseI GCWGC 3 cut(s) 32, 193, 278
Tsp45I GTSAC 6 cut(s) 242, 577, 601, 1093, 1564, 1642
TspGWI ACGGA 4 cut(s) 440, 606, 785, 908
TspRI CASTG 2 cut(s) 1254, 1293
VspI ATTAAT 1 cut(s) 182
XagI CCTNNNNNAGG 2 cut(s) 704, 1119
XapI RAATTY 2 cut(s) 672, 1459
XceI RCATGY 3 cut(s) 250, 879, 1166
XmnI GAANNNNTTC 1 cut(s) 946
XspI CTAG 5 cut(s) 131, 320, 387, 809, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.