Prupe.3G199700_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000150
Physical Location & Seq
Reverse (-)
20890809 .. 20893692
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G199700.1

Sequence Viewer

Length: 1428 bp
ATGTATTGTTGGTCGATCAATGTTCAAAAGACAAACACTAGTACTCATAGTTCAAAAGAAAACAGCATTTCAATAGCGAACGCCTTATCATCTGTTGTCATGGGGTATCGGAAAATATCTCAACTTTGCGCCGCCGCCGCTGACCTCACCTCGGGTCAAGACCATGCCTTGACGATGGCTTCACACGAAGATAAGCTCGTGGGCAAGATATCAGAGATCGAGAAATCCCTAGCCGCGCTTTCCACCCAGCAAATCCAACTCTTCGATTTGAAGAAATCAATATCGGATGAGCTTGACCTACTACGCGCCAGTAGGGCCCGCAGTTACAAACATGGGGCTGTTCATCCTTACCCAAGATTGCCCATGGAGGGGGAGTCATCAATGACGGTAAATCAAGGGGAACACAGATCTGTGTTTTTAATGATAACTTTCAGTAAAGGAAATATAGGTGCCCTATATGAAGTTAAATTCAAATACGGGGGAGAAGTTGATGATATGGACGGAAGAGCCGCCCTTGAACCTGTAGTCAAGTTCCCTTGTATTAACGAGTGTGCAAGGATTTTCAACCGCTTCCAACTATACGTATTTACGGAGGATGGTTGCATTAGGTCATTCGATACGAAAACTAGGGAATTAGATCCCTCCCTACCTCTTACCTTAGAGTTGAAGCCGAGTGGTACAGTCGTGTCCGCATATGACAGACTCTATTTTCTTGAAGAAGCATCGCCCTTCCTAGCAGATCCACTTCCATCTTTTGCAAAATACAATCCTGATGAGAACGACTGGGAGCGAATGCCTGAGTTTCCAATTCGTTATCCTTATCCTATGTGGGTAACTGGTTATGTTGTTTGTTATGGACTTATTTTGTATACACTAATTGATGGACATGAAAACTCTGATGTCGTTGCTTTTCACGTGGGTGGAATGAATTGGATTCGAGTGGAAGTTGACACTTGTGATTATACTCCTTTCCGAGGGAGGGCCGTGGTTGTAGGCGAGACTATATATGCCTTGGATCTATTTCAAGTGGATGAGATTATAGCATTCTCCTTGAAGATGAACAAACGTGACGACGATAGTATTGCATACACACTAATCAAGCTGTGTAAATTGGACGGCCTGAAGATTGCGTCTCCACCATGTCCATTTGATGGGCTTGAGAGTGACTATTTTGTTCATTTGGGGAACCAAGACTTTTTTCATGTTAAGACCGGCACTAATTTTGAATTTTACAAGGTTCAATATATTTGTATCACCACTTTTCAAATATTTGTTCGAGAAGACGGAATACATATGATCAAGACCTTACATTCATCTGTTCTTCCTATGGATATCGAGGCTTGTGGCCGGTTCATGCTCACGTTCGGCTTCACTACAGAGTGCGAGGATTATGAACCTGTAGAAGGGAAAAGTGCAGCTAGCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

476

Amino Acids

53.6

Weight (kDa)

5.1

Isoelectric Point (pI)

31.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000150)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g02900 FvH4_5g02920 FvH4_5g15972 FvH4_5g25390 FvH4_7g13450 FvH4_7g13450 FvH4_7g27631 FvH4_7g27640 FvH4_7g27660 FvH4_7g27670 FvH4_7g27710 FvH4_7g27720
malus_domestica MD06G1078700.v1.1 MD06G1178900.v1.1 MD06G1179300.v1.1 MD06G1179400.v1.1 MD14G1191500.v1.1 MD14G1191600.v1.1 MD16G1080700.v1.1 MD17G1269500.v1.1
prunus_persica Prupe.1G178900_v2.0.a1 Prupe.2G232100_v2.0.a1 Prupe.3G199300_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199700_v2.0.a1 Prupe.3G199800_v2.0.a1 Prupe.5G121900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G149900_v2.0.a1 Prupe.5G150200_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G179400_v2.0.a1 Prupe.5G190200_v2.0.a1 Prupe.5G190300_v2.0.a1 Prupe.5G190500_v2.0.a1 Prupe.5G190600_v2.0.a1 Prupe.5G190700_v2.0.a1 Prupe.5G190800_v2.0.a1 Prupe.5G196400_v2.0.a1 Prupe.5G196500_v2.0.a1 Prupe.5G196600_v2.0.a1 Prupe.5G196700_v2.0.a1 Prupe.5G196800_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.5G216900_v2.0.a1 Prupe.7G215400_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.7G215500_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.8G014700_v2.0.a1 Prupe.I003600_v2.0.a1
pyrus_communis pycom06g15900 pycom06g15930
rosa_chinensis RchiOBHm_Chr1g0378721 RchiOBHm_Chr1g0379031 RchiOBHm_Chr1g0379041 RchiOBHm_Chr1g0379111 RchiOBHm_Chr1g0379231 RchiOBHm_Chr1g0379381 RchiOBHm_Chr7g0205711 RchiOBHm_Chr7g0219841
rosa_laevigata RLG00000002638 RLG00000002641 RLG00000003360 RLG00000003362 RLG00000003364 RLG00000003972 RLG00000003975 RLG00000003976 RLG00000005302 RLG00000005303 RLG00000026142 RLG00000026318 RLG00000026378 RLG00000026379 RLG00000026396 RLG00000026404 RLG00000026405 RLG00000026412 RLG00000026413 RLG00000026766 RLG00000026768 RLG00000026774 RLG00000026775 RLG00000026776 RLG00000026778 RLG00000026779 RLG00000033034
rosa_multiflora Rmu_co8058818.1_g000001 Rmu_co8428857.1_g000001 Rmu_sc0000556.1_g000004 Rmu_sc0000556.1_g000017 Rmu_sc0000556.1_g000023 Rmu_sc0000556.1_g000038 Rmu_sc0000556.1_g000044 Rmu_sc0000556.1_g000046 Rmu_sc0000634.1_g000002 Rmu_sc0001232.1_g000027 Rmu_sc0003964.1_g000004 Rmu_sc0003964.1_g000013 Rmu_sc0006124.1_g000015 Rmu_sc0006761.1_g000020 Rmu_sc0006761.1_g000023 Rmu_sc0015070.1_g000001 Rmu_sc0017925.1_g000001 Rmu_sc0031430.1_g000005 Rmu_ssc0000119.1_g000014
rosa_roxburghii Rroxscaffold_2G00080740 Rroxscaffold_2G00090730 Rroxscaffold_3G00227790 Rroxscaffold_3G00235420 Rroxscaffold_3G00243990 Rroxscaffold_3G00244010 Rroxscaffold_3G00252040 Rroxscaffold_3G00252060 Rroxscaffold_3G00258760 Rroxscaffold_3G00258780 Rroxscaffold_3G00258790 Rroxscaffold_4G00280120 Rroxscaffold_4G00280210 Rroxscaffold_4G00280240 Rroxscaffold_4G00280300 Rroxscaffold_4G00280310 Rroxscaffold_5G00348380 Rroxscaffold_5G00352440 Rroxscaffold_5G00381760 Rroxscaffold_5G00381770 Rroxscaffold_7G00205800 Rroxscaffold_7G00205810 Rroxscaffold_7G00205850
rosa_rugosa Rorug01G0410800.1 Rorug01G0411700 Rorug01G0412500 Rorug06G0429700 Rorug07G0155400 Rorug07G0155600
rosa_samantha Rh1AG394500 Rh1AG433000 Rh1AG433600 Rh1AG434900 Rh1AG435200 Rh1BG359100 Rh1BG391200 Rh1BG392000 Rh1BG392700 Rh1BG399000 Rh1BG420100 Rh1BG420200 Rh1CG372200 Rh1CG403900 Rh1CG404800 Rh1CG412400 Rh1DG389700 Rh1DG389800 Rh1DG422400 Rh1DG423000 Rh1DG423500 Rh1DG452800 Rh1DG452900 Rh2AG541500 Rh2AG627500 Rh2BG637600 Rh2BG637700 Rh2CG524200 Rh2DG563600 Rh2DG563700 Rh2DG649200 Rh5CG213000 Rh6DG081900 Rh7AG030200 Rh7AG223700 Rh7AG224100 Rh7BG029600 Rh7BG030900 Rh7BG218800 Rh7BG283400 Rh7BG283700 Rh7BG283900 Rh7BG284100 Rh7BG284500 Rh7CG031200 Rh7CG031300 Rh7CG237000 Rh7CG237600 Rh7CG312000 Rh7DG030500 Rh7DG230800
rosa_wichuraiana Rw1G037920 Rw1G037950 Rw1G040890 Rw7G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 449
AccB7I CCANNNNNTGG 1 cut(s) 1151
AccI GTMKAC 1 cut(s) 869
AccII CGCG 2 cut(s) 236, 306
AciI CCGC 8 cut(s) 132, 135, 138, 234, 319, 510, 568, 690
AclWI GGATC 3 cut(s) 632, 734, 1023
AcoI YGGCCR 1 cut(s) 1345
AcsI RAATTY 2 cut(s) 467, 1226
AcuI CTGAAG 1 cut(s) 1142
AcvI CACGTG 1 cut(s) 916
AfaI GTAC 2 cut(s) 43, 679
AfiI CCNNNNNNNGG 7 cut(s) 151, 368, 369, 974, 979, 1151, 1403
AhlI ACTAGT 1 cut(s) 38
AjuI GAANNNNNNNTTGG 2 cut(s) 1182, 1214
AleI CACNNNNGTG 1 cut(s) 918
AluBI AGCT 4 cut(s) 196, 292, 1102, 1418
AluI AGCT 4 cut(s) 196, 292, 1102, 1418
Alw26I GTCTC 2 cut(s) 992, 1137
AlwI GGATC 3 cut(s) 632, 734, 1023
Ama87I CYCGRG 1 cut(s) 151
AoxI GGCC 4 cut(s) 315, 981, 1117, 1345
ApaI GGGCCC 1 cut(s) 319
ApeKI GCWGC 1 cut(s) 1415
ApoI RAATTY 2 cut(s) 467, 1226
AspLEI GCGC 3 cut(s) 131, 238, 308
AspS9I GGNCC 3 cut(s) 315, 316, 981
AsuHPI GGTGA 2 cut(s) 139, 1246
AsuNHI GCTAGC 1 cut(s) 1418
AvaI CYCGRG 1 cut(s) 151
BaeGI GKGCMC 2 cut(s) 319, 454
BaeI ACNNNNGTAYC 2 cut(s) 669, 702
BanI GGYRCC 1 cut(s) 449
BanII GRGCYC 1 cut(s) 319
BarI GAAGNNNNNNTAC 2 cut(s) 1272, 1304
BauI CACGAG 1 cut(s) 197
BbrPI CACGTG 1 cut(s) 916
BbsI GAAGAC 1 cut(s) 1287
BccI CCATC 5 cut(s) 169, 590, 757, 875, 1145
BceAI ACGGC 2 cut(s) 968, 1132
BcgI CGANNNNNNTGC 2 cut(s) 1064, 1098
BclI TGATCA 1 cut(s) 1296
BcoDI GTCTC 2 cut(s) 992, 1137
BcuI ACTAGT 1 cut(s) 38
BfaI CTAG 5 cut(s) 39, 230, 627, 734, 1419
BfmI CTRYAG 3 cut(s) 522, 1374, 1398
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 407
BisI GCNGC 6 cut(s) 132, 135, 138, 234, 510, 1416
BlsI GCNGC 6 cut(s) 133, 136, 139, 235, 511, 1417
BmcAI AGTACT 1 cut(s) 43
BmeT110I CYCGRG 1 cut(s) 151
BmgT120I GGNCC 3 cut(s) 315, 316, 981
BmiI GGNNCC 3 cut(s) 317, 451, 1187
BmrI ACTGGG 1 cut(s) 793
BmsI GCATC 1 cut(s) 731
BmtI GCTAGC 1 cut(s) 1422
BmuI ACTGGG 1 cut(s) 793
BpiI GAAGAC 1 cut(s) 1287
BpuEI CTTGAG 1 cut(s) 1178
BsaAI YACGTR 2 cut(s) 583, 916
BsaJI CCNNGG 5 cut(s) 150, 363, 973, 984, 1011
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 7 cut(s) 151, 368, 369, 974, 979, 1151, 1403
Bse118I RCCGGY 2 cut(s) 1211, 1347
Bse1I ACTGG 3 cut(s) 309, 788, 841
BseDI CCNNGG 5 cut(s) 150, 363, 973, 984, 1011
BseGI GGATG 4 cut(s) 292, 343, 601, 1036
BseLI CCNNNNNNNGG 7 cut(s) 151, 368, 369, 974, 979, 1151, 1403
BseMII CTCAG 1 cut(s) 789
BseNI ACTGG 3 cut(s) 309, 788, 841
BseSI GKGCMC 2 cut(s) 319, 454
BseYI CCCAGC 1 cut(s) 246
Bsh1236I CGCG 2 cut(s) 236, 306
BshFI GGCC 4 cut(s) 317, 983, 1119, 1347
BshNI GGYRCC 1 cut(s) 449
BsiHKCI CYCGRG 1 cut(s) 151
BsiSI CCGG 2 cut(s) 1212, 1348
BslI CCNNNNNNNGG 7 cut(s) 151, 368, 369, 974, 979, 1151, 1403
BsmAI GTCTC 2 cut(s) 992, 1137
BsmBI CGTCTC 1 cut(s) 1137
BsmI GAATGC 2 cut(s) 798, 1043
BsnI GGCC 4 cut(s) 317, 983, 1119, 1347
BsoBI CYCGRG 1 cut(s) 151
Bsp120I GGGCCC 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 319, 454
Bsp143I GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
Bsp19I CCATGG 1 cut(s) 363
BspACI CCGC 8 cut(s) 132, 135, 138, 234, 319, 510, 568, 690
BspANI GGCC 4 cut(s) 317, 983, 1119, 1347
BspCNI CTCAG 1 cut(s) 790
BspFNI CGCG 2 cut(s) 236, 306
BspLI GGNNCC 3 cut(s) 317, 451, 1187
BspOI GCTAGC 1 cut(s) 1422
BspPI GGATC 3 cut(s) 632, 734, 1023
BspQI GCTCTTC 1 cut(s) 499
BspT107I GGYRCC 1 cut(s) 449
BsrFI RCCGGY 2 cut(s) 1211, 1347
BsrI ACTGG 3 cut(s) 309, 788, 841
BssAI RCCGGY 2 cut(s) 1211, 1347
BssECI CCNNGG 5 cut(s) 150, 363, 973, 984, 1011
BssMI GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
BssNAI GTATAC 1 cut(s) 870
BssSI CACGAG 1 cut(s) 197
BssT1I CCWWGG 2 cut(s) 363, 1011
Bst1107I GTATAC 1 cut(s) 870
Bst2BI CACGAG 1 cut(s) 197
Bst4CI ACNGT 2 cut(s) 388, 682
Bst6I CTCTTC 2 cut(s) 266, 499
BstBAI YACGTR 2 cut(s) 583, 916
BstC8I GCNNGC 2 cut(s) 319, 1420
BstDEI CTNAG 2 cut(s) 658, 798
BstDSI CCRYGG 2 cut(s) 363, 984
BstENI CCTNNNNNAGG 2 cut(s) 972, 1401
BstF5I GGATG 4 cut(s) 292, 343, 601, 1036
BstFNI CGCG 2 cut(s) 236, 306
BstHHI GCGC 3 cut(s) 131, 238, 308
BstKTI GATC 7 cut(s) 18, 219, 410, 640, 742, 1018, 1299
BstMAI GTCTC 2 cut(s) 992, 1137
BstMBI GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
BstMWI GCNNNNNNNGC 2 cut(s) 137, 314
BstSFI CTRYAG 3 cut(s) 522, 1374, 1398
BstSLI GKGCMC 2 cut(s) 319, 454
BstSNI TACGTA 1 cut(s) 583
BstUI CGCG 2 cut(s) 236, 306
BstV2I GAAGAC 1 cut(s) 1287
BstX2I RGATCY 4 cut(s) 407, 637, 739, 1015
BstYI RGATCY 4 cut(s) 407, 637, 739, 1015
BstZ17I GTATAC 1 cut(s) 870
BsuRI GGCC 4 cut(s) 317, 983, 1119, 1347
BtgI CCRYGG 2 cut(s) 363, 984
BtgZI GCGATG 1 cut(s) 708
BtsCI GGATG 4 cut(s) 292, 343, 601, 1036
Cac8I GCNNGC 2 cut(s) 319, 1420
CfoI GCGC 3 cut(s) 131, 238, 308
Cfr10I RCCGGY 2 cut(s) 1211, 1347
Cfr13I GGNCC 3 cut(s) 315, 316, 981
CseI GACGC 1 cut(s) 1119
Csp6I GTAC 2 cut(s) 42, 678
CviAII CATG 9 cut(s) 100, 164, 332, 364, 887, 1140, 1202, 1354, 1425
CviQI GTAC 2 cut(s) 42, 678
DdeI CTNAG 2 cut(s) 658, 798
DpnI GATC 7 cut(s) 17, 218, 409, 639, 741, 1017, 1298
DpnII GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
EaeI YGGCCR 1 cut(s) 1345
Eam1104I CTCTTC 2 cut(s) 266, 499
EarI CTCTTC 2 cut(s) 266, 499
Eco105I TACGTA 1 cut(s) 583
Eco130I CCWWGG 2 cut(s) 363, 1011
Eco24I GRGCYC 1 cut(s) 319
Eco32I GATATC 2 cut(s) 210, 1333
Eco57I CTGAAG 1 cut(s) 1142
Eco72I CACGTG 1 cut(s) 916
Eco88I CYCGRG 1 cut(s) 151
EcoNI CCTNNNNNAGG 2 cut(s) 972, 1401
EcoO109I RGGNCCY 1 cut(s) 315
EcoRV GATATC 2 cut(s) 210, 1333
EcoT14I CCWWGG 2 cut(s) 363, 1011
EcoT38I GRGCYC 1 cut(s) 319
ErhI CCWWGG 2 cut(s) 363, 1011
Esp3I CGTCTC 1 cut(s) 1137
FaeI CATG 9 cut(s) 103, 167, 335, 367, 890, 1143, 1205, 1357, 1428
FatI CATG 9 cut(s) 99, 163, 331, 363, 886, 1139, 1201, 1353, 1424
FauI CCCGC 1 cut(s) 326
FauNDI CATATG 2 cut(s) 694, 1293
FbaI TGATCA 1 cut(s) 1296
FblI GTMKAC 1 cut(s) 869
Fnu4HI GCNGC 6 cut(s) 132, 135, 138, 234, 510, 1416
FokI GGATG 4 cut(s) 299, 330, 608, 1043
FriOI GRGCYC 1 cut(s) 319
Fsp4HI GCNGC 6 cut(s) 132, 135, 138, 234, 510, 1416
FspBI CTAG 5 cut(s) 39, 230, 627, 734, 1419
GlaI GCGC 3 cut(s) 130, 237, 307
GluI GCNGC 6 cut(s) 132, 135, 138, 234, 510, 1416
GsaI CCCAGC 1 cut(s) 250
HaeIII GGCC 4 cut(s) 317, 983, 1119, 1347
HapII CCGG 2 cut(s) 1212, 1348
HgaI GACGC 1 cut(s) 1119
HhaI GCGC 3 cut(s) 131, 238, 308
Hin1II CATG 9 cut(s) 103, 167, 335, 367, 890, 1143, 1205, 1357, 1428
Hin6I GCGC 3 cut(s) 129, 236, 306
HinP1I GCGC 3 cut(s) 129, 236, 306
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HinfI GANTC 3 cut(s) 374, 702, 934
HpaII CCGG 2 cut(s) 1212, 1348
HphI GGTGA 2 cut(s) 139, 1246
Hpy166II GTNNAC 2 cut(s) 870, 949
Hpy188I TCNGA 5 cut(s) 111, 214, 286, 898, 974
Hpy188III TCNNGA 6 cut(s) 158, 220, 713, 770, 1277, 1300
Hpy8I GTNNAC 2 cut(s) 870, 949
Hpy99I CGWCG 1 cut(s) 1076
HpyAV CCTTC 2 cut(s) 739, 1397
HpyCH4III ACNGT 2 cut(s) 388, 682
HpyCH4IV ACGT 4 cut(s) 582, 915, 1066, 1361
HpyCH4V TGCA 5 cut(s) 554, 603, 758, 1085, 1415
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 314
HpyF3I CTNAG 2 cut(s) 658, 798
HpySE526I ACGT 4 cut(s) 582, 915, 1066, 1361
Hsp92II CATG 9 cut(s) 103, 167, 335, 367, 890, 1143, 1205, 1357, 1428
HspAI GCGC 3 cut(s) 129, 236, 306
Ksp22I TGATCA 1 cut(s) 1296
Kzo9I GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 1 cut(s) 787
LweI GCATC 1 cut(s) 731
MaeI CTAG 5 cut(s) 39, 230, 627, 734, 1419
MaeII ACGT 4 cut(s) 582, 915, 1066, 1361
MaeIII GTNAC 4 cut(s) 323, 832, 1067, 1163
MalI GATC 7 cut(s) 17, 218, 409, 639, 741, 1017, 1298
MboI GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
MboII GAAGA 9 cut(s) 200, 253, 283, 516, 728, 1066, 1135, 1292, 1313
MflI RGATCY 4 cut(s) 407, 637, 739, 1015
MhlI GDGCHC 2 cut(s) 319, 454
MluCI AATT 8 cut(s) 467, 632, 807, 876, 928, 1109, 1219, 1226
MlyI GAGTC 2 cut(s) 383, 696
MmeI TCCRAC 2 cut(s) 280, 598
MseI TTAA 4 cut(s) 419, 465, 543, 1206
MslI CAYNNNNRTG 1 cut(s) 918
MspA1I CMGCKG 1 cut(s) 140
MspI CCGG 2 cut(s) 1212, 1348
Mva1269I GAATGC 2 cut(s) 798, 1043
MvnI CGCG 2 cut(s) 236, 306
MwoI GCNNNNNNNGC 2 cut(s) 137, 314
NcoI CCATGG 1 cut(s) 363
NdeI CATATG 2 cut(s) 694, 1293
NdeII GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
NheI GCTAGC 1 cut(s) 1418
NlaIII CATG 9 cut(s) 103, 167, 335, 367, 890, 1143, 1205, 1357, 1428
NlaIV GGNNCC 3 cut(s) 317, 451, 1187
NmeAIII GCCGAG 1 cut(s) 696
NmuCI GTSAC 2 cut(s) 1067, 1163
OliI CACNNNNGTG 1 cut(s) 918
PciSI GCTCTTC 1 cut(s) 499
PctI GAATGC 2 cut(s) 798, 1043
PfeI GAWTC 1 cut(s) 934
PflMI CCANNNNNTGG 1 cut(s) 1151
PkrI GCNGC 6 cut(s) 133, 136, 139, 235, 511, 1417
PleI GAGTC 2 cut(s) 382, 696
PmaCI CACGTG 1 cut(s) 916
PmlI CACGTG 1 cut(s) 916
PpsI GAGTC 2 cut(s) 382, 696
Ppu21I YACGTR 2 cut(s) 583, 916
PspCI CACGTG 1 cut(s) 916
PspFI CCCAGC 1 cut(s) 246
PspN4I GGNNCC 3 cut(s) 317, 451, 1187
PspOMI GGGCCC 1 cut(s) 315
PspPI GGNCC 3 cut(s) 315, 316, 981
PsrI GAACNNNNNNTAC 2 cut(s) 34, 66
PsuI RGATCY 4 cut(s) 407, 637, 739, 1015
RsaI GTAC 2 cut(s) 43, 679
RsaNI GTAC 2 cut(s) 42, 678
RseI CAYNNNNRTG 1 cut(s) 918
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 4 cut(s) 419, 465, 543, 1206
SatI GCNGC 6 cut(s) 132, 135, 138, 234, 510, 1416
Sau3AI GATC 7 cut(s) 15, 216, 407, 637, 739, 1015, 1296
Sau96I GGNCC 3 cut(s) 315, 316, 981
ScaI AGTACT 1 cut(s) 43
SchI GAGTC 2 cut(s) 383, 696
SduI GDGCHC 2 cut(s) 319, 454
SfaNI GCATC 1 cut(s) 731
SfcI CTRYAG 3 cut(s) 522, 1374, 1398
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 1 cut(s) 1157
SmoI CTYRAG 1 cut(s) 1157
SnaBI TACGTA 1 cut(s) 583
SpeI ACTAGT 1 cut(s) 38
Sse9I AATT 8 cut(s) 467, 632, 807, 876, 928, 1109, 1219, 1226
SsiI CCGC 8 cut(s) 132, 135, 138, 234, 319, 510, 568, 690
SspI AATATT 1 cut(s) 1269
SspMI CTAG 5 cut(s) 39, 230, 627, 734, 1419
StyI CCWWGG 2 cut(s) 363, 1011
TaaI ACNGT 2 cut(s) 388, 682
TaiI ACGT 4 cut(s) 585, 918, 1069, 1364
TaqI TCGA 7 cut(s) 14, 219, 264, 615, 937, 1276, 1335
TasI AATT 8 cut(s) 467, 632, 807, 876, 928, 1109, 1219, 1226
TatI WGTACW 1 cut(s) 41
TauI GCSGC 5 cut(s) 134, 137, 140, 236, 512
TfiI GAWTC 1 cut(s) 934
Tru1I TTAA 4 cut(s) 419, 465, 543, 1206
Tru9I TTAA 4 cut(s) 419, 465, 543, 1206
TseFI GTSAC 2 cut(s) 1067, 1163
TseI GCWGC 1 cut(s) 1415
Tsp45I GTSAC 2 cut(s) 1067, 1163
TspGWI ACGGA 3 cut(s) 516, 605, 1299
Van91I CCANNNNNTGG 1 cut(s) 1151
XagI CCTNNNNNAGG 2 cut(s) 972, 1401
XapI RAATTY 2 cut(s) 467, 1226
XmiI GTMKAC 1 cut(s) 869
XspI CTAG 5 cut(s) 39, 230, 627, 734, 1419
ZrmI AGTACT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.