FvH4_4g30271

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000154
Physical Location & Seq
Forward (+)
29990801 .. 29993107
2307 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30271.t1

Sequence Viewer

Length: 1842 bp
ATGTGCGGGAATCAAGGTATGTTTACAAGTTTGGATACAACATTCACACATACTGTCAAACTTGGAAACAACACTAGAATGAAGGTTACTGGAAAGGGAGTTGTGAAGTTGATGTTGAATGGTGTTTGCTATGTCTTTGGTGATGTGTATTGTGTGCCTGATCTCAAAAACAATCTTTTGAGTGTGGGACAACTTCAGGAAAAGGGAGTGGCAGTATTGTTTAAAGATGGTGTGTGCAGTGTTTTTCATCCACAGAAGGGAAAAATGGCAGAGTCTTTCATGAGTGCAAACCAGATGTTTGTTCTGCTAGCTGAACCATTTGTAAAGGCAGAAGAAGAGAGATGCCTTCAAATCAGCACTACGGATCAATCGAAGCATTGGCATCATCGATATGGTCATCTCAGCTACAAAGGCCTGCGTACTTTGCATTACAAGAAAATGGTGGTTGGTTTGCCTCAGCTTGTAGCTTCAAGTGTTACTTGTGAAGCATGTATGAAGGGTAAGCAGCATCGGACTCCAATTCCTAAAAGGAGTCAATGGAGGGCAACTGAAAGACTACAACTAATTCACGCAGACCTTTGCGGCCCTATCACTCCAGCTTCAAGCAGCCAGAAGAGGTATTTCTTGTGTTTCATAGATGATTTTTCTAGAAAGGCATGGATTTACTTTCTGTTAGAAAAGTCAGAAACGTTTTATCATTTTAAGCGTTTCAAGATACTTGTGGAAAAAGAAATTGGAATGCCTATTAAATGTCTGAGGACAGATAGAGGAGGGGAGTTCAACTCTATTGAATTCAATGATTTCTATAAGCAACATGGGGTAAAGAGGCAATTGACCACAACCTACACTCCACAACAAAATGGAGTTGCGAAGCGCAAGAATCGTACAGTGATGAACTTGGTGAGAGCTATGTTATCAGAGAAGAAGTTGCCAAAGACGTTCTGGCCAGAAGTTGTTCGGTGGACGATTCATGTCTTGAATCGTTCACCTACTTTAGCTGTGAAAGATATGACCCCTGAAGAGGCATGGAGCGAAGTGAAGCCATCAGTGGAGTACTTTCGAGTGTTTGGATGTGTGGGACATGTTCACATTCCAAATGCTAAGAGAACTAAACTTGAAGATAAAAGTGTGAGCTGCGTACTGCTTGGGGTGAGTGATAAATCCAAAGCATACAAAATGTTTGATCCAGTTGCCAAGAAGATCATTGTAAGCCGTGATGTGGTATTTGAAGAAGATCGTGTGTGGGATTGGGATGTTAGCTATGAGAAGGAGCAGTCAATGGAACTAGAATGGGAAGACAACACAGAAAGGAATGCAGATGAAGAAGAAGAAGCAATGGAAAGCACAGATGAAGAAGAAGAAGCGGCGGAAGCCGAGAATGAGTCACAGGTTGCTGAAGGGGATTTGATAGCAAGGGAGGGCAGAAATCGAGGACCTCCTGAGTGGATGGCAGACTACACTCCCGGTGAAGGTTTGTCAGGAGAAGATGAAGCAAACATGGCACTTATGGTGTCATCAGATCCAACAAGTTTTGAAGAAGCTGTCAAAAGTTCAAAATGGAGGTTGGCTATGGATGAAGAAATCAAGTCTATCGAAAGAAATCAGACCTGGCACTTGGTGGAACTACCTTCTGGAGCCAAGAAAATTGGAGTGAAGTGGATTTACAAAACCAAGCTAAATGAGCTTGGTGAGGTCGACAAATACAAAGCAAGGCTGGTGGTGAAGGGTTACTCTCAACAGCATGGAATTGATTATACAGAAGTATATGCACCTGTGGCTAGAATGGATACAGTAAGGATGATCATAGCTTTTGCGGCTCAAAGAGGCTGGAAACTTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve zf-CCHC

Protein Analysis

614

Amino Acids

70.33

Weight (kDa)

7.86

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 1 - 70 7.6e-17 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 115 - 169 5.4e-12 GAG-pre-integrase domain
rve PF00665 185 - 284 9.7e-09 Integrase core domain
SH3_retrovirus PF25597 358 - 420 6.8e-23 Retroviral polymerase SH3-like domain
RVT_2 PF07727 534 - 612 7.4e-25 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1695
AciI CCGC 5 cut(s) 6, 582, 1364, 1367, 1814
AclI AACGTT 1 cut(s) 689
AclWI GGATC 3 cut(s) 372, 1178, 1514
AcoI YGGCCR 1 cut(s) 944
AcsI RAATTY 1 cut(s) 791
AcuI CTGAAG 3 cut(s) 179, 1038, 1416
AdeI CACNNNGTG 1 cut(s) 1618
AfaI GTAC 4 cut(s) 421, 886, 1055, 1140
AfiI CCNNNNNNNGG 4 cut(s) 257, 1021, 1219, 1469
AflIII ACRYGT 1 cut(s) 1081
AjnI CCWGG 1 cut(s) 1607
AjuI GAANNNNNNNTTGG 2 cut(s) 717, 749
AlwI GGATC 3 cut(s) 372, 1178, 1514
AoxI GGCC 3 cut(s) 412, 583, 944
ApeKI GCWGC 3 cut(s) 505, 606, 1134
ApoI RAATTY 1 cut(s) 791
Asp700I GAANNNNTTC 1 cut(s) 954
AspLEI GCGC 1 cut(s) 876
AspS9I GGNCC 2 cut(s) 584, 1433
AsuC2I CCSGG 1 cut(s) 1464
AsuHPI GGTGA 7 cut(s) 152, 913, 978, 1162, 1478, 1700, 1732
AsuNHI GCTAGC 1 cut(s) 307
AvaII GGWCC 1 cut(s) 1433
BalI TGGCCA 1 cut(s) 946
BarI GAAGNNNNNNTAC 2 cut(s) 1646, 1678
BbsI GAAGAC 1 cut(s) 1302
BbvCI CCTCAGC 1 cut(s) 456
BbvI GCAGC 3 cut(s) 517, 618, 1121
BccI CCATC 3 cut(s) 221, 1051, 1441
BceAI ACGGC 1 cut(s) 1197
BciT130I CCWGG 1 cut(s) 1609
BciVI GTATCC 2 cut(s) 28, 1780
BclI TGATCA 1 cut(s) 1800
BcnI CCSGG 1 cut(s) 1464
BfaI CTAG 5 cut(s) 75, 308, 648, 1286, 1779
BfuI GTATCC 2 cut(s) 28, 1780
BisI GCNGC 6 cut(s) 506, 583, 607, 1135, 1365, 1815
BlsI GCNGC 6 cut(s) 507, 584, 608, 1136, 1366, 1816
BmcAI AGTACT 1 cut(s) 1055
Bme1390I CCNGG 2 cut(s) 1464, 1609
Bme18I GGWCC 1 cut(s) 1433
BmgT120I GGNCC 2 cut(s) 584, 1433
BmiI GGNNCC 1 cut(s) 1636
BmrFI CCNGG 2 cut(s) 1464, 1609
BmsI GCATC 3 cut(s) 332, 391, 517
BmtI GCTAGC 1 cut(s) 311
BpiI GAAGAC 1 cut(s) 1302
BplI GAGNNNNNCTC 2 cut(s) 767, 799
BpmI CTGGAG 2 cut(s) 579, 1653
Bpu10I CCTNAGC 1 cut(s) 456
BpuMI CCSGG 1 cut(s) 1464
Bsa29I ATCGAT 1 cut(s) 388
BsaXI ACNNNNNCTCC 4 cut(s) 198, 228, 832, 862
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 1021, 1219, 1469
Bse1I ACTGG 2 cut(s) 94, 1187
Bse3DI GCAATG 1 cut(s) 1341
BseBI CCWGG 1 cut(s) 1609
BseCI ATCGAT 1 cut(s) 388
BseGI GGATG 6 cut(s) 247, 1076, 1258, 1452, 1579, 1803
BseLI CCNNNNNNNGG 4 cut(s) 257, 1021, 1219, 1469
BseMI GCAATG 1 cut(s) 1341
BseMII CTCAG 4 cut(s) 415, 470, 746, 1431
BseNI ACTGG 2 cut(s) 94, 1187
BseRI GAGGAG 1 cut(s) 783
BseXI GCAGC 3 cut(s) 517, 618, 1121
BsgI GTGCAG 1 cut(s) 256
BshFI GGCC 3 cut(s) 414, 585, 946
BshVI ATCGAT 1 cut(s) 388
BsiSI CCGG 1 cut(s) 1464
BslFI GGGAC 2 cut(s) 201, 1092
BslI CCNNNNNNNGG 4 cut(s) 257, 1021, 1219, 1469
BsmFI GGGAC 2 cut(s) 201, 1092
BsmI GAATGC 2 cut(s) 744, 1318
BsnI GGCC 3 cut(s) 414, 585, 946
Bsp143I GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
BspACI CCGC 5 cut(s) 6, 582, 1364, 1367, 1814
BspANI GGCC 3 cut(s) 414, 585, 946
BspCNI CTCAG 4 cut(s) 414, 469, 747, 1432
BspDI ATCGAT 1 cut(s) 388
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 1 cut(s) 1636
BspOI GCTAGC 1 cut(s) 311
BspPI GGATC 3 cut(s) 372, 1178, 1514
BsrDI GCAATG 1 cut(s) 1341
BsrI ACTGG 2 cut(s) 94, 1187
BssMI GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
Bst2UI CCWGG 1 cut(s) 1609
Bst4CI ACNGT 3 cut(s) 55, 889, 1792
Bst6I CTCTTC 3 cut(s) 330, 608, 1014
BstC8I GCNNGC 2 cut(s) 309, 416
BstDEI CTNAG 5 cut(s) 401, 456, 755, 1101, 1440
BstF5I GGATG 6 cut(s) 247, 1076, 1258, 1452, 1579, 1803
BstHHI GCGC 1 cut(s) 876
BstKTI GATC 7 cut(s) 163, 367, 1186, 1203, 1237, 1522, 1803
BstMBI GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
BstMWI GCNNNNNNNGC 7 cut(s) 411, 424, 1370, 1499, 1681, 1775, 1814
BstNI CCWGG 1 cut(s) 1609
BstNSI RCATGY 2 cut(s) 492, 1085
BstSCI CCNGG 2 cut(s) 1462, 1607
BstV1I GCAGC 3 cut(s) 517, 618, 1121
BstV2I GAAGAC 1 cut(s) 1302
BstX2I RGATCY 1 cut(s) 1519
BstYI RGATCY 1 cut(s) 1519
Bsu15I ATCGAT 1 cut(s) 388
BsuI GTATCC 2 cut(s) 28, 1780
BsuRI GGCC 3 cut(s) 414, 585, 946
BsuTUI ATCGAT 1 cut(s) 388
BtsCI GGATG 6 cut(s) 247, 1076, 1258, 1452, 1579, 1803
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 3 cut(s) 244, 894, 1053
Cac8I GCNNGC 2 cut(s) 309, 416
CciI TCATGA 1 cut(s) 279
CfoI GCGC 1 cut(s) 876
Cfr13I GGNCC 2 cut(s) 584, 1433
ClaI ATCGAT 1 cut(s) 388
Csp6I GTAC 4 cut(s) 420, 885, 1054, 1139
CspCI CAANNNNNGTGG 2 cut(s) 1698, 1733
CviAII CATG 9 cut(s) 280, 489, 657, 815, 971, 1026, 1082, 1498, 1742
CviQI GTAC 4 cut(s) 420, 885, 1054, 1139
DdeI CTNAG 5 cut(s) 401, 456, 755, 1101, 1440
DpnI GATC 7 cut(s) 162, 366, 1185, 1202, 1236, 1521, 1802
DpnII GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
DraI TTTAAA 1 cut(s) 223
DraIII CACNNNGTG 1 cut(s) 1618
EaeI YGGCCR 1 cut(s) 944
Eam1104I CTCTTC 3 cut(s) 330, 608, 1014
EarI CTCTTC 3 cut(s) 330, 608, 1014
EciI GGCGGA 1 cut(s) 1382
Eco147I AGGCCT 1 cut(s) 414
Eco47I GGWCC 1 cut(s) 1433
Eco57I CTGAAG 3 cut(s) 179, 1038, 1416
EcoO109I RGGNCCY 1 cut(s) 1433
EcoRI GAATTC 1 cut(s) 791
EcoRII CCWGG 1 cut(s) 1607
FaeI CATG 9 cut(s) 283, 492, 660, 818, 974, 1029, 1085, 1501, 1745
FalI AAGNNNNNCTT 2 cut(s) 463, 495
FaqI GGGAC 2 cut(s) 201, 1092
FatI CATG 9 cut(s) 279, 488, 656, 814, 970, 1025, 1081, 1497, 1741
FbaI TGATCA 1 cut(s) 1800
FblI GTMKAC 1 cut(s) 1695
Fnu4HI GCNGC 6 cut(s) 506, 583, 607, 1135, 1365, 1815
FokI GGATG 6 cut(s) 234, 1083, 1265, 1459, 1586, 1810
Fsp4HI GCNGC 6 cut(s) 506, 583, 607, 1135, 1365, 1815
FspBI CTAG 5 cut(s) 75, 308, 648, 1286, 1779
GlaI GCGC 1 cut(s) 875
GluI GCNGC 6 cut(s) 506, 583, 607, 1135, 1365, 1815
GsuI CTGGAG 2 cut(s) 579, 1653
HaeIII GGCC 3 cut(s) 414, 585, 946
HapII CCGG 1 cut(s) 1464
HhaI GCGC 1 cut(s) 876
Hin1II CATG 9 cut(s) 283, 492, 660, 818, 974, 1029, 1085, 1501, 1745
Hin6I GCGC 1 cut(s) 874
HinP1I GCGC 1 cut(s) 874
HincII GTYRAC 1 cut(s) 1696
HindII GTYRAC 1 cut(s) 1696
HinfI GANTC 8 cut(s) 10, 272, 514, 532, 880, 967, 979, 1382
HpaII CCGG 1 cut(s) 1464
HphI GGTGA 7 cut(s) 152, 913, 978, 1162, 1478, 1700, 1732
Hpy166II GTNNAC 5 cut(s) 24, 963, 986, 1087, 1696
Hpy188I TCNGA 6 cut(s) 513, 685, 756, 919, 1519, 1605
Hpy188III TCNNGA 8 cut(s) 197, 280, 648, 712, 976, 1439, 1479, 1632
Hpy8I GTNNAC 5 cut(s) 24, 963, 986, 1087, 1696
HpyAV CCTTC 9 cut(s) 76, 250, 356, 490, 1261, 1391, 1463, 1638, 1717
HpyCH4III ACNGT 3 cut(s) 55, 889, 1792
HpyCH4IV ACGT 2 cut(s) 689, 938
HpyCH4V TGCA 5 cut(s) 237, 287, 427, 1316, 1769
HpyF10VI GCNNNNNNNGC 7 cut(s) 411, 424, 1370, 1499, 1681, 1775, 1814
HpyF3I CTNAG 5 cut(s) 401, 456, 755, 1101, 1440
HpySE526I ACGT 2 cut(s) 689, 938
Hsp92II CATG 9 cut(s) 283, 492, 660, 818, 974, 1029, 1085, 1501, 1745
HspAI GCGC 1 cut(s) 874
Ksp22I TGATCA 1 cut(s) 1800
Kzo9I GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
LmnI GCTCC 3 cut(s) 1029, 1270, 1634
Lsp1109I GCAGC 3 cut(s) 517, 618, 1121
LweI GCATC 3 cut(s) 332, 391, 517
MaeI CTAG 5 cut(s) 75, 308, 648, 1286, 1779
MaeII ACGT 2 cut(s) 689, 938
MaeIII GTNAC 4 cut(s) 85, 475, 1383, 1727
MalI GATC 7 cut(s) 162, 366, 1185, 1202, 1236, 1521, 1802
MboI GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
MfeI CAATTG 1 cut(s) 830
MflI RGATCY 1 cut(s) 1519
MlsI TGGCCA 1 cut(s) 946
MluCI AATT 7 cut(s) 519, 564, 732, 791, 830, 1644, 1746
MluNI TGGCCA 1 cut(s) 946
MlyI GAGTC 4 cut(s) 281, 508, 541, 1391
MmeI TCCRAC 1 cut(s) 1547
Mox20I TGGCCA 1 cut(s) 946
MroXI GAANNNNTTC 1 cut(s) 954
MscI TGGCCA 1 cut(s) 946
MseI TTAA 4 cut(s) 222, 702, 747, 1840
MslI CAYNNNNRTG 2 cut(s) 77, 390
Msp20I TGGCCA 1 cut(s) 946
MspI CCGG 1 cut(s) 1464
MspR9I CCNGG 2 cut(s) 1464, 1609
MunI CAATTG 1 cut(s) 830
Mva1269I GAATGC 2 cut(s) 744, 1318
MvaI CCWGG 1 cut(s) 1609
MwoI GCNNNNNNNGC 7 cut(s) 411, 424, 1370, 1499, 1681, 1775, 1814
NciI CCSGG 1 cut(s) 1464
NdeII GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
NheI GCTAGC 1 cut(s) 307
NlaIII CATG 9 cut(s) 283, 492, 660, 818, 974, 1029, 1085, 1501, 1745
NlaIV GGNNCC 1 cut(s) 1636
NmeAIII GCCGAG 1 cut(s) 1399
NmuCI GTSAC 1 cut(s) 1383
NspI RCATGY 2 cut(s) 492, 1085
PagI TCATGA 1 cut(s) 279
PceI AGGCCT 1 cut(s) 414
PciI ACATGT 1 cut(s) 1081
PcsI WCGNNNNNNNCGW 1 cut(s) 368
PctI GAATGC 2 cut(s) 744, 1318
PdmI GAANNNNTTC 1 cut(s) 954
PfeI GAWTC 4 cut(s) 10, 880, 967, 979
PkrI GCNGC 6 cut(s) 507, 584, 608, 1136, 1366, 1816
PleI GAGTC 4 cut(s) 280, 508, 540, 1390
PpsI GAGTC 4 cut(s) 280, 508, 540, 1390
PpuMI RGGWCCY 1 cut(s) 1433
PscI ACATGT 1 cut(s) 1081
Psp1406I AACGTT 1 cut(s) 689
Psp5II RGGWCCY 1 cut(s) 1433
Psp6I CCWGG 1 cut(s) 1607
PspGI CCWGG 1 cut(s) 1607
PspN4I GGNNCC 1 cut(s) 1636
PspPI GGNCC 2 cut(s) 584, 1433
PspPPI RGGWCCY 1 cut(s) 1433
PsuI RGATCY 1 cut(s) 1519
RsaI GTAC 4 cut(s) 421, 886, 1055, 1140
RsaNI GTAC 4 cut(s) 420, 885, 1054, 1139
RseI CAYNNNNRTG 2 cut(s) 77, 390
SalI GTCGAC 1 cut(s) 1694
SaqAI TTAA 4 cut(s) 222, 702, 747, 1840
SatI GCNGC 6 cut(s) 506, 583, 607, 1135, 1365, 1815
Sau3AI GATC 7 cut(s) 160, 364, 1183, 1200, 1234, 1519, 1800
Sau96I GGNCC 2 cut(s) 584, 1433
ScaI AGTACT 1 cut(s) 1055
SchI GAGTC 4 cut(s) 281, 508, 541, 1391
ScrFI CCNGG 2 cut(s) 1464, 1609
SfaNI GCATC 3 cut(s) 332, 391, 517
SinI GGWCC 1 cut(s) 1433
SmiMI CAYNNNNRTG 2 cut(s) 77, 390
Sse9I AATT 7 cut(s) 519, 564, 732, 791, 830, 1644, 1746
SseBI AGGCCT 1 cut(s) 414
SsiI CCGC 5 cut(s) 6, 582, 1364, 1367, 1814
SspMI CTAG 5 cut(s) 75, 308, 648, 1286, 1779
StuI AGGCCT 1 cut(s) 414
StyD4I CCNGG 2 cut(s) 1462, 1607
TaaI ACNGT 3 cut(s) 55, 889, 1792
TaiI ACGT 2 cut(s) 692, 941
TaqI TCGA 6 cut(s) 371, 388, 1060, 1429, 1593, 1695
TasI AATT 7 cut(s) 519, 564, 732, 791, 830, 1644, 1746
TatI WGTACW 1 cut(s) 1053
TauI GCSGC 3 cut(s) 585, 1367, 1817
TfiI GAWTC 4 cut(s) 10, 880, 967, 979
Tru1I TTAA 4 cut(s) 222, 702, 747, 1840
Tru9I TTAA 4 cut(s) 222, 702, 747, 1840
TscAI CASTG 3 cut(s) 244, 894, 1053
TseFI GTSAC 1 cut(s) 1383
TseI GCWGC 3 cut(s) 505, 606, 1134
Tsp45I GTSAC 1 cut(s) 1383
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 3 cut(s) 244, 894, 1053
VpaK11BI GGWCC 1 cut(s) 1433
XapI RAATTY 1 cut(s) 791
XbaI TCTAGA 1 cut(s) 647
XceI RCATGY 2 cut(s) 492, 1085
XcmI CCANNNNNNNNNTGG 1 cut(s) 939
XmiI GTMKAC 1 cut(s) 1695
XmnI GAANNNNTTC 1 cut(s) 954
XspI CTAG 5 cut(s) 75, 308, 648, 1286, 1779
ZrmI AGTACT 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.