Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 125 - 369 | 3.4e-85 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1230 |
| AccI | GTMKAC | 1 cut(s) | 714 |
| AciI | CCGC | 3 cut(s) | 161, 587, 1496 |
| AclWI | GGATC | 2 cut(s) | 57, 287 |
| AfaI | GTAC | 3 cut(s) | 449, 539, 983 |
| AfeI | AGCGCT | 1 cut(s) | 732 |
| AgsI | TTSAA | 4 cut(s) | 138, 359, 689, 1061 |
| AjiI | CACGTC | 1 cut(s) | 1410 |
| AjnI | CCWGG | 1 cut(s) | 1108 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 364, 396, 1697, 1729 |
| AleI | CACNNNNGTG | 1 cut(s) | 533 |
| Alw21I | GWGCWC | 1 cut(s) | 1409 |
| Alw26I | GTCTC | 1 cut(s) | 1680 |
| AlwI | GGATC | 2 cut(s) | 57, 287 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 659 |
| Aor51HI | AGCGCT | 1 cut(s) | 732 |
| AoxI | GGCC | 1 cut(s) | 398 |
| ApeKI | GCWGC | 4 cut(s) | 193, 1508, 1511, 1789 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1202, 1234 |
| AspLEI | GCGC | 1 cut(s) | 733 |
| AsuHPI | GGTGA | 4 cut(s) | 44, 110, 473, 1720 |
| AsuNHI | GCTAGC | 1 cut(s) | 1235 |
| BanII | GRGCYC | 1 cut(s) | 744 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 243, 275 |
| Bbv12I | GWGCWC | 1 cut(s) | 1409 |
| BbvI | GCAGC | 4 cut(s) | 205, 1498, 1520, 1776 |
| BccI | CCATC | 6 cut(s) | 23, 292, 549, 1070, 1165, 1694 |
| BciT130I | CCWGG | 1 cut(s) | 1110 |
| BciVI | GTATCC | 1 cut(s) | 553 |
| BcoDI | GTCTC | 1 cut(s) | 1680 |
| BfaI | CTAG | 7 cut(s) | 269, 552, 756, 1236, 1695, 1772, 1802 |
| BfmI | CTRYAG | 2 cut(s) | 1101, 1579 |
| BfoI | RGCGCY | 1 cut(s) | 734 |
| BfuAI | ACCTGC | 1 cut(s) | 1230 |
| BfuI | GTATCC | 1 cut(s) | 553 |
| BisI | GCNGC | 5 cut(s) | 194, 588, 1509, 1512, 1790 |
| BlsI | GCNGC | 5 cut(s) | 195, 589, 1510, 1513, 1791 |
| Bme1390I | CCNGG | 1 cut(s) | 1110 |
| BmgBI | CACGTC | 1 cut(s) | 1410 |
| BmrFI | CCNGG | 1 cut(s) | 1110 |
| BmsI | GCATC | 5 cut(s) | 933, 1029, 1070, 1141, 1530 |
| BmtI | GCTAGC | 1 cut(s) | 1239 |
| BpuEI | CTTGAG | 3 cut(s) | 135, 707, 1751 |
| BsaJI | CCNNGG | 1 cut(s) | 1491 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1296, 1326, 1428, 1458 |
| Bse1I | ACTGG | 4 cut(s) | 545, 904, 1634, 1820 |
| Bse3DI | GCAATG | 2 cut(s) | 348, 1013 |
| BseBI | CCWGG | 1 cut(s) | 1110 |
| BseDI | CCNNGG | 1 cut(s) | 1491 |
| BseGI | GGATG | 7 cut(s) | 210, 625, 1081, 1085, 1156, 1458, 1545 |
| BseMI | GCAATG | 2 cut(s) | 348, 1013 |
| BseNI | ACTGG | 4 cut(s) | 545, 904, 1634, 1820 |
| BseRI | GAGGAG | 3 cut(s) | 714, 1356, 1417 |
| BseXI | GCAGC | 4 cut(s) | 205, 1498, 1520, 1776 |
| BseYI | CCCAGC | 1 cut(s) | 1318 |
| BsgI | GTGCAG | 1 cut(s) | 867 |
| BshFI | GGCC | 1 cut(s) | 400 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1409 |
| BsiSI | CCGG | 1 cut(s) | 1383 |
| BslFI | GGGAC | 1 cut(s) | 1578 |
| BsmAI | GTCTC | 1 cut(s) | 1680 |
| BsmFI | GGGAC | 1 cut(s) | 1578 |
| BsnI | GGCC | 1 cut(s) | 400 |
| Bsp1286I | GDGCHC | 2 cut(s) | 744, 1409 |
| Bsp143I | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| BspACI | CCGC | 3 cut(s) | 161, 587, 1496 |
| BspANI | GGCC | 1 cut(s) | 400 |
| BspHI | TCATGA | 1 cut(s) | 1752 |
| BspMAI | CTGCAG | 1 cut(s) | 1583 |
| BspMI | ACCTGC | 1 cut(s) | 1230 |
| BspOI | GCTAGC | 1 cut(s) | 1239 |
| BspPI | GGATC | 2 cut(s) | 57, 287 |
| BsrDI | GCAATG | 2 cut(s) | 348, 1013 |
| BsrI | ACTGG | 4 cut(s) | 545, 904, 1634, 1820 |
| BssECI | CCNNGG | 1 cut(s) | 1491 |
| BssMI | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| BssNAI | GTATAC | 1 cut(s) | 715 |
| Bst1107I | GTATAC | 1 cut(s) | 715 |
| Bst2UI | CCWGG | 1 cut(s) | 1110 |
| Bst4CI | ACNGT | 5 cut(s) | 56, 109, 1198, 1312, 1607 |
| Bst6I | CTCTTC | 2 cut(s) | 139, 1331 |
| BstC8I | GCNNGC | 4 cut(s) | 93, 165, 1237, 1359 |
| BstF5I | GGATG | 7 cut(s) | 210, 625, 1081, 1085, 1156, 1458, 1545 |
| BstH2I | RGCGCY | 1 cut(s) | 734 |
| BstHHI | GCGC | 1 cut(s) | 733 |
| BstKTI | GATC | 5 cut(s) | 52, 295, 967, 1348, 1738 |
| BstMAI | GTCTC | 1 cut(s) | 1680 |
| BstMBI | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| BstNI | CCWGG | 1 cut(s) | 1110 |
| BstSCI | CCNGG | 1 cut(s) | 1108 |
| BstSFI | CTRYAG | 2 cut(s) | 1101, 1579 |
| BstV1I | GCAGC | 4 cut(s) | 205, 1498, 1520, 1776 |
| BstX2I | RGATCY | 1 cut(s) | 292 |
| BstYI | RGATCY | 1 cut(s) | 292 |
| BstZ17I | GTATAC | 1 cut(s) | 715 |
| BsuI | GTATCC | 1 cut(s) | 553 |
| BsuRI | GGCC | 1 cut(s) | 400 |
| BtrI | CACGTC | 1 cut(s) | 1410 |
| BtsCI | GGATG | 7 cut(s) | 210, 625, 1081, 1085, 1156, 1458, 1545 |
| BtsI | GCAGTG | 1 cut(s) | 1588 |
| BtsIMutI | CAGTG | 4 cut(s) | 552, 1588, 1641, 1827 |
| BveI | ACCTGC | 1 cut(s) | 1230 |
| Cac8I | GCNNGC | 4 cut(s) | 93, 165, 1237, 1359 |
| CaiI | CAGNNNCTG | 1 cut(s) | 659 |
| CciI | TCATGA | 1 cut(s) | 1752 |
| CfoI | GCGC | 1 cut(s) | 733 |
| Csp6I | GTAC | 3 cut(s) | 448, 538, 982 |
| CviAII | CATG | 6 cut(s) | 762, 940, 1072, 1246, 1643, 1753 |
| CviQI | GTAC | 3 cut(s) | 448, 538, 982 |
| DpnI | GATC | 5 cut(s) | 51, 294, 966, 1347, 1737 |
| DpnII | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| DraI | TTTAAA | 2 cut(s) | 439, 931 |
| Eam1104I | CTCTTC | 2 cut(s) | 139, 1331 |
| EarI | CTCTTC | 2 cut(s) | 139, 1331 |
| EciI | GGCGGA | 1 cut(s) | 1511 |
| Eco24I | GRGCYC | 1 cut(s) | 744 |
| Eco32I | GATATC | 1 cut(s) | 1750 |
| Eco47III | AGCGCT | 1 cut(s) | 732 |
| EcoRII | CCWGG | 1 cut(s) | 1108 |
| EcoRV | GATATC | 1 cut(s) | 1750 |
| EcoT38I | GRGCYC | 1 cut(s) | 744 |
| FaeI | CATG | 6 cut(s) | 765, 943, 1075, 1249, 1646, 1756 |
| FaqI | GGGAC | 1 cut(s) | 1578 |
| FatI | CATG | 6 cut(s) | 761, 939, 1071, 1245, 1642, 1752 |
| FauI | CCCGC | 1 cut(s) | 168 |
| FblI | GTMKAC | 1 cut(s) | 714 |
| Fnu4HI | GCNGC | 5 cut(s) | 194, 588, 1509, 1512, 1790 |
| FokI | GGATG | 7 cut(s) | 217, 632, 1088, 1092, 1163, 1465, 1552 |
| FriOI | GRGCYC | 1 cut(s) | 744 |
| Fsp4HI | GCNGC | 5 cut(s) | 194, 588, 1509, 1512, 1790 |
| FspBI | CTAG | 7 cut(s) | 269, 552, 756, 1236, 1695, 1772, 1802 |
| GlaI | GCGC | 1 cut(s) | 732 |
| GluI | GCNGC | 5 cut(s) | 194, 588, 1509, 1512, 1790 |
| GsaI | CCCAGC | 1 cut(s) | 1322 |
| HaeII | RGCGCY | 1 cut(s) | 734 |
| HaeIII | GGCC | 1 cut(s) | 400 |
| HapII | CCGG | 1 cut(s) | 1383 |
| HhaI | GCGC | 1 cut(s) | 733 |
| Hin1II | CATG | 6 cut(s) | 765, 943, 1075, 1249, 1646, 1756 |
| Hin6I | GCGC | 1 cut(s) | 731 |
| HinP1I | GCGC | 1 cut(s) | 731 |
| HincII | GTYRAC | 1 cut(s) | 1485 |
| HindII | GTYRAC | 1 cut(s) | 1485 |
| HindIII | AAGCTT | 2 cut(s) | 1180, 1359 |
| HinfI | GANTC | 4 cut(s) | 319, 935, 1323, 1566 |
| HpaII | CCGG | 1 cut(s) | 1383 |
| HphI | GGTGA | 4 cut(s) | 44, 110, 473, 1720 |
| Hpy166II | GTNNAC | 6 cut(s) | 279, 469, 538, 715, 883, 1485 |
| Hpy188I | TCNGA | 3 cut(s) | 297, 1275, 1350 |
| Hpy188III | TCNNGA | 4 cut(s) | 724, 805, 1685, 1753 |
| Hpy8I | GTNNAC | 6 cut(s) | 279, 469, 538, 715, 883, 1485 |
| Hpy99I | CGWCG | 1 cut(s) | 1414 |
| HpyAV | CCTTC | 8 cut(s) | 245, 343, 451, 787, 791, 1010, 1691, 1699 |
| HpyCH4III | ACNGT | 5 cut(s) | 56, 109, 1198, 1312, 1607 |
| HpyCH4IV | ACGT | 1 cut(s) | 1409 |
| HpySE526I | ACGT | 1 cut(s) | 1409 |
| Hsp92II | CATG | 6 cut(s) | 765, 943, 1075, 1249, 1646, 1756 |
| HspAI | GCGC | 1 cut(s) | 731 |
| Kzo9I | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| LmnI | GCTCC | 4 cut(s) | 385, 603, 1315, 1404 |
| Lsp1109I | GCAGC | 4 cut(s) | 205, 1498, 1520, 1776 |
| LweI | GCATC | 5 cut(s) | 933, 1029, 1070, 1141, 1530 |
| MaeI | CTAG | 7 cut(s) | 269, 552, 756, 1236, 1695, 1772, 1802 |
| MaeII | ACGT | 1 cut(s) | 1409 |
| MaeIII | GTNAC | 4 cut(s) | 56, 242, 1198, 1474 |
| MalI | GATC | 5 cut(s) | 51, 294, 966, 1347, 1737 |
| MboI | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| MboII | GAAGA | 8 cut(s) | 126, 188, 260, 302, 358, 1129, 1348, 1471 |
| MfeI | CAATTG | 1 cut(s) | 904 |
| MflI | RGATCY | 1 cut(s) | 292 |
| MhlI | GDGCHC | 2 cut(s) | 744, 1409 |
| MluCI | AATT | 9 cut(s) | 75, 127, 598, 781, 864, 891, 904, 1052, 1084 |
| MlyI | GAGTC | 3 cut(s) | 328, 944, 1560 |
| MmeI | TCCRAC | 2 cut(s) | 597, 1533 |
| MseI | TTAA | 9 cut(s) | 438, 863, 890, 930, 1281, 1292, 1430, 1593, 1691 |
| MslI | CAYNNNNRTG | 5 cut(s) | 422, 533, 569, 839, 1662 |
| MspA1I | CMGCKG | 1 cut(s) | 1511 |
| MspI | CCGG | 1 cut(s) | 1383 |
| MspR9I | CCNGG | 1 cut(s) | 1110 |
| MunI | CAATTG | 1 cut(s) | 904 |
| MvaI | CCWGG | 1 cut(s) | 1110 |
| NdeII | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| NheI | GCTAGC | 1 cut(s) | 1235 |
| NlaIII | CATG | 6 cut(s) | 765, 943, 1075, 1249, 1646, 1756 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| OliI | CACNNNNGTG | 1 cut(s) | 533 |
| PagI | TCATGA | 1 cut(s) | 1752 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 810 |
| PfeI | GAWTC | 1 cut(s) | 1323 |
| PkrI | GCNGC | 5 cut(s) | 195, 589, 1510, 1513, 1791 |
| PleI | GAGTC | 3 cut(s) | 327, 943, 1560 |
| PpsI | GAGTC | 3 cut(s) | 327, 943, 1560 |
| Psp6I | CCWGG | 1 cut(s) | 1108 |
| PspFI | CCCAGC | 1 cut(s) | 1318 |
| PspGI | CCWGG | 1 cut(s) | 1108 |
| PstI | CTGCAG | 1 cut(s) | 1583 |
| PstNI | CAGNNNCTG | 1 cut(s) | 659 |
| PsuI | RGATCY | 1 cut(s) | 292 |
| PvuII | CAGCTG | 1 cut(s) | 1511 |
| RsaI | GTAC | 3 cut(s) | 449, 539, 983 |
| RsaNI | GTAC | 3 cut(s) | 448, 538, 982 |
| RseI | CAYNNNNRTG | 5 cut(s) | 422, 533, 569, 839, 1662 |
| SaqAI | TTAA | 9 cut(s) | 438, 863, 890, 930, 1281, 1292, 1430, 1593, 1691 |
| SatI | GCNGC | 5 cut(s) | 194, 588, 1509, 1512, 1790 |
| Sau3AI | GATC | 5 cut(s) | 49, 292, 964, 1345, 1735 |
| SchI | GAGTC | 3 cut(s) | 328, 944, 1560 |
| ScrFI | CCNGG | 1 cut(s) | 1110 |
| SduI | GDGCHC | 2 cut(s) | 744, 1409 |
| SfaNI | GCATC | 5 cut(s) | 933, 1029, 1070, 1141, 1530 |
| SfcI | CTRYAG | 2 cut(s) | 1101, 1579 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 422, 533, 569, 839, 1662 |
| SmlI | CTYRAG | 3 cut(s) | 150, 722, 1766 |
| SmoI | CTYRAG | 3 cut(s) | 150, 722, 1766 |
| Sse9I | AATT | 9 cut(s) | 75, 127, 598, 781, 864, 891, 904, 1052, 1084 |
| SsiI | CCGC | 3 cut(s) | 161, 587, 1496 |
| SspMI | CTAG | 7 cut(s) | 269, 552, 756, 1236, 1695, 1772, 1802 |
| StyD4I | CCNGG | 1 cut(s) | 1108 |
| TaaI | ACNGT | 5 cut(s) | 56, 109, 1198, 1312, 1607 |
| TaiI | ACGT | 1 cut(s) | 1412 |
| TaqI | TCGA | 5 cut(s) | 484, 669, 804, 1457, 1684 |
| TasI | AATT | 9 cut(s) | 75, 127, 598, 781, 864, 891, 904, 1052, 1084 |
| TatI | WGTACW | 1 cut(s) | 447 |
| TauI | GCSGC | 1 cut(s) | 590 |
| TfiI | GAWTC | 1 cut(s) | 1323 |
| Tru1I | TTAA | 9 cut(s) | 438, 863, 890, 930, 1281, 1292, 1430, 1593, 1691 |
| Tru9I | TTAA | 9 cut(s) | 438, 863, 890, 930, 1281, 1292, 1430, 1593, 1691 |
| TscAI | CASTG | 4 cut(s) | 552, 1588, 1641, 1827 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| TseI | GCWGC | 4 cut(s) | 193, 1508, 1511, 1789 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspGWI | ACGGA | 1 cut(s) | 657 |
| TspRI | CASTG | 4 cut(s) | 552, 1588, 1641, 1827 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 552 |
| XmiI | GTMKAC | 1 cut(s) | 714 |
| XspI | CTAG | 7 cut(s) | 269, 552, 756, 1236, 1695, 1772, 1802 |