Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 39 |
| Acc65I | GGTACC | 1 cut(s) | 105 |
| AccB1I | GGYRCC | 1 cut(s) | 105 |
| AciI | CCGC | 2 cut(s) | 32, 188 |
| AfaI | GTAC | 3 cut(s) | 10, 107, 118 |
| AgsI | TTSAA | 2 cut(s) | 123, 164 |
| AjiI | CACGTC | 1 cut(s) | 279 |
| AjnI | CCWGG | 1 cut(s) | 64 |
| Alw26I | GTCTC | 1 cut(s) | 186 |
| AoxI | GGCC | 1 cut(s) | 14 |
| ApeKI | GCWGC | 1 cut(s) | 83 |
| Asp718I | GGTACC | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 1 cut(s) | 55 |
| AxyI | CCTNAGG | 1 cut(s) | 217 |
| BanI | GGYRCC | 1 cut(s) | 105 |
| BbvI | GCAGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 1 cut(s) | 66 |
| BcoDI | GTCTC | 1 cut(s) | 186 |
| BfaI | CTAG | 1 cut(s) | 12 |
| BfuAI | ACCTGC | 1 cut(s) | 39 |
| BisI | GCNGC | 1 cut(s) | 84 |
| BlsI | GCNGC | 1 cut(s) | 85 |
| Bme1390I | CCNGG | 1 cut(s) | 66 |
| BmgBI | CACGTC | 1 cut(s) | 279 |
| BmiI | GGNNCC | 1 cut(s) | 107 |
| BmrFI | CCNGG | 1 cut(s) | 66 |
| BpmI | CTGGAG | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 1 cut(s) | 65 |
| Bse21I | CCTNAGG | 1 cut(s) | 217 |
| BseBI | CCWGG | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseMII | CTCAG | 1 cut(s) | 231 |
| BseXI | GCAGC | 1 cut(s) | 95 |
| BshFI | GGCC | 1 cut(s) | 16 |
| BshNI | GGYRCC | 1 cut(s) | 105 |
| BsmAI | GTCTC | 1 cut(s) | 186 |
| BsnI | GGCC | 1 cut(s) | 16 |
| Bsp143I | GATC | 1 cut(s) | 209 |
| BspACI | CCGC | 2 cut(s) | 32, 188 |
| BspANI | GGCC | 1 cut(s) | 16 |
| BspCNI | CTCAG | 1 cut(s) | 230 |
| BspLI | GGNNCC | 1 cut(s) | 107 |
| BspMI | ACCTGC | 1 cut(s) | 39 |
| BspT107I | GGYRCC | 1 cut(s) | 105 |
| BssECI | CCNNGG | 1 cut(s) | 65 |
| BssMI | GATC | 1 cut(s) | 209 |
| Bst2UI | CCWGG | 1 cut(s) | 66 |
| BstDEI | CTNAG | 3 cut(s) | 101, 110, 217 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| BstKTI | GATC | 1 cut(s) | 212 |
| BstMAI | GTCTC | 1 cut(s) | 186 |
| BstMBI | GATC | 1 cut(s) | 209 |
| BstNI | CCWGG | 1 cut(s) | 66 |
| BstSCI | CCNGG | 1 cut(s) | 64 |
| BstV1I | GCAGC | 1 cut(s) | 95 |
| Bsu36I | CCTNAGG | 1 cut(s) | 217 |
| BsuRI | GGCC | 1 cut(s) | 16 |
| BtrI | CACGTC | 1 cut(s) | 279 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| BtsI | GCAGTG | 1 cut(s) | 255 |
| BtsIMutI | CAGTG | 1 cut(s) | 255 |
| BveI | ACCTGC | 1 cut(s) | 39 |
| Csp6I | GTAC | 3 cut(s) | 9, 106, 117 |
| CviAII | CATG | 2 cut(s) | 29, 172 |
| CviJI | RGCY | 4 cut(s) | 16, 154, 168, 222 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 154, 168, 222 |
| CviQI | GTAC | 3 cut(s) | 9, 106, 117 |
| DdeI | CTNAG | 3 cut(s) | 101, 110, 217 |
| DpnI | GATC | 1 cut(s) | 211 |
| DpnII | GATC | 1 cut(s) | 209 |
| Eco81I | CCTNAGG | 1 cut(s) | 217 |
| EcoRII | CCWGG | 1 cut(s) | 64 |
| FaeI | CATG | 2 cut(s) | 32, 175 |
| FaiI | YATR | 4 cut(s) | 30, 130, 173, 267 |
| FatI | CATG | 2 cut(s) | 28, 171 |
| FauI | CCCGC | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 1 cut(s) | 84 |
| FokI | GGATG | 1 cut(s) | 188 |
| Fsp4HI | GCNGC | 1 cut(s) | 84 |
| FspBI | CTAG | 1 cut(s) | 12 |
| GluI | GCNGC | 1 cut(s) | 84 |
| GsuI | CTGGAG | 1 cut(s) | 258 |
| HaeIII | GGCC | 1 cut(s) | 16 |
| Hin1II | CATG | 2 cut(s) | 32, 175 |
| HinfI | GANTC | 2 cut(s) | 97, 272 |
| HphI | GGTGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 237 |
| Hpy99I | CGWCG | 1 cut(s) | 280 |
| HpyAV | CCTTC | 2 cut(s) | 64, 158 |
| HpyCH4IV | ACGT | 1 cut(s) | 278 |
| HpyCH4V | TGCA | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 3 cut(s) | 101, 110, 217 |
| HpySE526I | ACGT | 1 cut(s) | 278 |
| Hsp92II | CATG | 2 cut(s) | 32, 175 |
| KpnI | GGTACC | 1 cut(s) | 109 |
| Kzo9I | GATC | 1 cut(s) | 209 |
| LmnI | GCTCC | 2 cut(s) | 73, 245 |
| LpnPI | CCDG | 7 cut(s) | 30, 34, 51, 78, 168, 204, 222 |
| Lsp1109I | GCAGC | 1 cut(s) | 95 |
| MaeI | CTAG | 1 cut(s) | 12 |
| MaeII | ACGT | 1 cut(s) | 278 |
| MalI | GATC | 1 cut(s) | 211 |
| MboI | GATC | 1 cut(s) | 209 |
| MnlI | CCTC | 3 cut(s) | 107, 226, 233 |
| MseI | TTAA | 1 cut(s) | 90 |
| MspR9I | CCNGG | 1 cut(s) | 66 |
| MvaI | CCWGG | 1 cut(s) | 66 |
| NdeII | GATC | 1 cut(s) | 209 |
| NlaIII | CATG | 2 cut(s) | 32, 175 |
| NlaIV | GGNNCC | 1 cut(s) | 107 |
| PfeI | GAWTC | 2 cut(s) | 97, 272 |
| PkrI | GCNGC | 1 cut(s) | 85 |
| Psp6I | CCWGG | 1 cut(s) | 64 |
| PspGI | CCWGG | 1 cut(s) | 64 |
| PspN4I | GGNNCC | 1 cut(s) | 107 |
| RsaI | GTAC | 3 cut(s) | 10, 107, 118 |
| RsaNI | GTAC | 3 cut(s) | 9, 106, 117 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| SatI | GCNGC | 1 cut(s) | 84 |
| Sau3AI | GATC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 1 cut(s) | 66 |
| SetI | ASST | 7 cut(s) | 24, 53, 107, 111, 118, 218, 281 |
| SsiI | CCGC | 2 cut(s) | 32, 188 |
| SspMI | CTAG | 1 cut(s) | 12 |
| StyD4I | CCNGG | 1 cut(s) | 64 |
| TaiI | ACGT | 1 cut(s) | 281 |
| TaqI | TCGA | 1 cut(s) | 275 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 97, 272 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TscAI | CASTG | 1 cut(s) | 255 |
| TseI | GCWGC | 1 cut(s) | 83 |
| TspDTI | ATGAA | 1 cut(s) | 160 |
| TspRI | CASTG | 1 cut(s) | 255 |
| XspI | CTAG | 1 cut(s) | 12 |