transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 39 - 130 | 1.6e-08 | Leucine-rich repeat region |
| DUF4219 | PF13961 | 414 - 439 | 3.4e-11 | Domain of unknown function (DUF4219) |
| Retrotran_gag_2 | PF14223 | 426 - 586 | 2.9e-15 | gag-polypeptide of LTR copia-type |
| RVT_2 | PF07727 | 876 - 1119 | 5.5e-78 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| PK_Tyr_Ser-Thr | PF07714 | 1217 - 1370 | 9.4e-17 | Protein tyrosine and serine/threonine kinase |
| Pkinase | PF00069 | 1218 - 1376 | 1.9e-13 | Protein kinase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 798 |
| AarI | CACCTGC | 1 cut(s) | 4147 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 91, 539 |
| Acc36I | ACCTGC | 2 cut(s) | 1754, 4147 |
| Acc65I | GGTACC | 1 cut(s) | 817 |
| AccB1I | GGYRCC | 2 cut(s) | 817, 1847 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 128, 200, 614, 2186, 2932, 3015 |
| AccI | GTMKAC | 1 cut(s) | 493 |
| AccII | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| AccIII | TCCGGA | 2 cut(s) | 1033, 3683 |
| AciI | CCGC | 7 cut(s) | 61, 1606, 1707, 1858, 1953, 2977, 4308 |
| AclI | AACGTT | 2 cut(s) | 223, 2789 |
| AcoI | YGGCCR | 4 cut(s) | 202, 1721, 1779, 4028 |
| AcuI | CTGAAG | 3 cut(s) | 160, 1826, 2121 |
| AcyI | GRCGYC | 2 cut(s) | 1362, 3347 |
| AdeI | CACNNNGTG | 4 cut(s) | 251, 1591, 3050, 4037 |
| AfeI | AGCGCT | 1 cut(s) | 1824 |
| AflIII | ACRYGT | 7 cut(s) | 124, 1260, 1271, 2962, 3946, 4041, 4101 |
| AgeI | ACCGGT | 1 cut(s) | 3149 |
| AjiI | CACGTC | 1 cut(s) | 4042 |
| AjnI | CCWGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 657, 689 |
| Alw21I | GWGCWC | 3 cut(s) | 692, 1443, 3596 |
| Alw26I | GTCTC | 5 cut(s) | 164, 1675, 1804, 3155, 4229 |
| Ama87I | CYCGRG | 1 cut(s) | 1529 |
| Aor13HI | TCCGGA | 2 cut(s) | 1033, 3683 |
| Aor51HI | AGCGCT | 1 cut(s) | 1824 |
| ApeKI | GCWGC | 7 cut(s) | 446, 1540, 2054, 2290, 2522, 2840, 4142 |
| AsiGI | ACCGGT | 1 cut(s) | 3149 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1077, 3171, 3528 |
| Asp718I | GGTACC | 1 cut(s) | 817 |
| AspLEI | GCGC | 2 cut(s) | 1825, 2703 |
| AspS9I | GGNCC | 7 cut(s) | 93, 1300, 2002, 2025, 2241, 2435, 4088 |
| AsuHPI | GGTGA | 9 cut(s) | 50, 608, 1220, 1603, 1898, 3164, 3748, 3965, 4049 |
| AsuII | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| AvaI | CYCGRG | 1 cut(s) | 1529 |
| AvaII | GGWCC | 4 cut(s) | 93, 1300, 2025, 2241 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1852, 1885 |
| BalI | TGGCCA | 2 cut(s) | 1781, 4030 |
| BamHI | GGATCC | 1 cut(s) | 4174 |
| BanI | GGYRCC | 2 cut(s) | 817, 1847 |
| BanII | GRGCYC | 1 cut(s) | 692 |
| BauI | CACGAG | 3 cut(s) | 2205, 2642, 2748 |
| BbsI | GAAGAC | 1 cut(s) | 1094 |
| Bbv12I | GWGCWC | 3 cut(s) | 692, 1443, 3596 |
| BbvI | GCAGC | 7 cut(s) | 433, 1527, 2041, 2277, 2534, 2852, 4154 |
| BceAI | ACGGC | 3 cut(s) | 189, 325, 2688 |
| BciT130I | CCWGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| BciVI | GTATCC | 2 cut(s) | 341, 3628 |
| BcoDI | GTCTC | 5 cut(s) | 164, 1675, 1804, 3155, 4229 |
| BfaI | CTAG | 7 cut(s) | 560, 2774, 3110, 3122, 3245, 4190, 4239 |
| BfmI | CTRYAG | 2 cut(s) | 1990, 3837 |
| BfoI | RGCGCY | 2 cut(s) | 1826, 2704 |
| BfuAI | ACCTGC | 2 cut(s) | 1754, 4147 |
| BfuI | GTATCC | 2 cut(s) | 341, 3628 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 210 |
| BglII | AGATCT | 1 cut(s) | 2913 |
| BisI | GCNGC | 9 cut(s) | 447, 1541, 1606, 1707, 2055, 2291, 2523, 2841, 4143 |
| BlsI | GCNGC | 9 cut(s) | 448, 1542, 1607, 1708, 2056, 2292, 2524, 2842, 4144 |
| BmcAI | AGTACT | 1 cut(s) | 1580 |
| Bme1390I | CCNGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| Bme18I | GGWCC | 4 cut(s) | 93, 1300, 2025, 2241 |
| BmeT110I | CYCGRG | 1 cut(s) | 1529 |
| BmgBI | CACGTC | 1 cut(s) | 4042 |
| BmgT120I | GGNCC | 7 cut(s) | 93, 1300, 2002, 2025, 2241, 2435, 4088 |
| BmiI | GGNNCC | 8 cut(s) | 112, 280, 819, 995, 1162, 1849, 3357, 4176 |
| BmrFI | CCNGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| BmrI | ACTGGG | 1 cut(s) | 1570 |
| BmsI | GCATC | 8 cut(s) | 1342, 1441, 2086, 2576, 3391, 3772, 4065, 4333 |
| BmuI | ACTGGG | 1 cut(s) | 1570 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3570 |
| BpiI | GAAGAC | 1 cut(s) | 1094 |
| BpmI | CTGGAG | 3 cut(s) | 177, 1012, 2254 |
| Bpu10I | CCTNAGC | 2 cut(s) | 89, 4152 |
| Bpu14I | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| BpuEI | CTTGAG | 1 cut(s) | 3212 |
| Bsa29I | ATCGAT | 1 cut(s) | 1547 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3789 |
| BsaHI | GRCGYC | 2 cut(s) | 1362, 3347 |
| BsaI | GGTCTC | 1 cut(s) | 1675 |
| BsaWI | WCCGGW | 5 cut(s) | 593, 1033, 3149, 3683, 4177 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1881, 1911, 4281, 4311 |
| Bse118I | RCCGGY | 1 cut(s) | 3149 |
| Bse1I | ACTGG | 7 cut(s) | 967, 1576, 1870, 2064, 2798, 2858, 4095 |
| Bse3DI | GCAATG | 4 cut(s) | 1701, 3855, 3895, 3922 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3789 |
| BseAI | TCCGGA | 2 cut(s) | 1033, 3683 |
| BseBI | CCWGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| BseCI | ATCGAT | 1 cut(s) | 1547 |
| BseJI | GATNNNNATC | 1 cut(s) | 3789 |
| BseMI | GCAATG | 4 cut(s) | 1701, 3855, 3895, 3922 |
| BseMII | CTCAG | 7 cut(s) | 103, 2259, 2399, 2571, 3533, 3785, 4143 |
| BseNI | ACTGG | 7 cut(s) | 967, 1576, 1870, 2064, 2798, 2858, 4095 |
| BseRI | GAGGAG | 2 cut(s) | 1809, 4052 |
| BseXI | GCAGC | 7 cut(s) | 433, 1527, 2041, 2277, 2534, 2852, 4154 |
| BseYI | CCCAGC | 1 cut(s) | 3911 |
| Bsh1236I | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| BshNI | GGYRCC | 2 cut(s) | 817, 1847 |
| BshTI | ACCGGT | 1 cut(s) | 3149 |
| BshVI | ATCGAT | 1 cut(s) | 1547 |
| BsiHKAI | GWGCWC | 3 cut(s) | 692, 1443, 3596 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1529 |
| BsiSI | CCGG | 5 cut(s) | 594, 1034, 3150, 3684, 4178 |
| BslFI | GGGAC | 3 cut(s) | 682, 754, 1490 |
| BsmAI | GTCTC | 5 cut(s) | 164, 1675, 1804, 3155, 4229 |
| BsmFI | GGGAC | 3 cut(s) | 682, 754, 1490 |
| BsmI | GAATGC | 2 cut(s) | 2887, 3327 |
| Bso31I | GGTCTC | 1 cut(s) | 1675 |
| BsoBI | CYCGRG | 1 cut(s) | 1529 |
| Bsp119I | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| Bsp1286I | GDGCHC | 3 cut(s) | 692, 1443, 3596 |
| Bsp13I | TCCGGA | 2 cut(s) | 1033, 3683 |
| Bsp1407I | TGTACA | 1 cut(s) | 3579 |
| Bsp19I | CCATGG | 1 cut(s) | 1672 |
| BspACI | CCGC | 7 cut(s) | 61, 1606, 1707, 1858, 1953, 2977, 4308 |
| BspCNI | CTCAG | 7 cut(s) | 102, 2258, 2398, 2572, 3534, 3784, 4144 |
| BspDI | ATCGAT | 1 cut(s) | 1547 |
| BspEI | TCCGGA | 2 cut(s) | 1033, 3683 |
| BspFNI | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| BspHI | TCATGA | 1 cut(s) | 181 |
| BspLI | GGNNCC | 8 cut(s) | 112, 280, 819, 995, 1162, 1849, 3357, 4176 |
| BspMAI | CTGCAG | 1 cut(s) | 1994 |
| BspMI | ACCTGC | 2 cut(s) | 1754, 4147 |
| BspT104I | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| BspT107I | GGYRCC | 2 cut(s) | 817, 1847 |
| BspTNI | GGTCTC | 1 cut(s) | 1675 |
| BsrDI | GCAATG | 4 cut(s) | 1701, 3855, 3895, 3922 |
| BsrFI | RCCGGY | 1 cut(s) | 3149 |
| BsrGI | TGTACA | 1 cut(s) | 3579 |
| BsrI | ACTGG | 7 cut(s) | 967, 1576, 1870, 2064, 2798, 2858, 4095 |
| BssAI | RCCGGY | 1 cut(s) | 3149 |
| BssNI | GRCGYC | 2 cut(s) | 1362, 3347 |
| BssSI | CACGAG | 3 cut(s) | 2205, 2642, 2748 |
| BssT1I | CCWWGG | 8 cut(s) | 336, 664, 862, 1672, 1909, 2393, 3238, 3800 |
| Bst2BI | CACGAG | 3 cut(s) | 2205, 2642, 2748 |
| Bst2UI | CCWGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| Bst4CI | ACNGT | 5 cut(s) | 44, 636, 1184, 2143, 2818 |
| Bst6I | CTCTTC | 8 cut(s) | 1496, 1652, 1802, 1809, 2598, 3548, 3645, 4260 |
| BstACI | GRCGYC | 2 cut(s) | 1362, 3347 |
| BstAUI | TGTACA | 1 cut(s) | 3579 |
| BstBI | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| BstC8I | GCNNGC | 7 cut(s) | 109, 215, 724, 1390, 1761, 3335, 3679 |
| BstDSI | CCRYGG | 1 cut(s) | 1672 |
| BstEII | GGTNACC | 2 cut(s) | 56, 1208 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1307 |
| BstFNI | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| BstH2I | RGCGCY | 2 cut(s) | 1826, 2704 |
| BstHHI | GCGC | 2 cut(s) | 1825, 2703 |
| BstMAI | GTCTC | 5 cut(s) | 164, 1675, 1804, 3155, 4229 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 210, 2111, 2522, 2840, 3011, 3355, 3883 |
| BstNI | CCWGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3570 |
| BstPI | GGTNACC | 2 cut(s) | 56, 1208 |
| BstSCI | CCNGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| BstSFI | CTRYAG | 2 cut(s) | 1990, 3837 |
| BstUI | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| BstV1I | GCAGC | 7 cut(s) | 433, 1527, 2041, 2277, 2534, 2852, 4154 |
| BstV2I | GAAGAC | 1 cut(s) | 1094 |
| BstX2I | RGATCY | 5 cut(s) | 1624, 2350, 2638, 2913, 4174 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1789, 1916 |
| BstYI | RGATCY | 5 cut(s) | 1624, 2350, 2638, 2913, 4174 |
| Bsu15I | ATCGAT | 1 cut(s) | 1547 |
| BsuI | GTATCC | 2 cut(s) | 341, 3628 |
| BsuTUI | ATCGAT | 1 cut(s) | 1547 |
| BtgI | CCRYGG | 1 cut(s) | 1672 |
| BtgZI | GCGATG | 3 cut(s) | 1719, 2376, 2553 |
| BtrI | CACGTC | 1 cut(s) | 4042 |
| BtsIMutI | CAGTG | 6 cut(s) | 49, 1802, 1863, 4102, 4219, 4338 |
| BveI | ACCTGC | 2 cut(s) | 1754, 4147 |
| Cac8I | GCNNGC | 7 cut(s) | 109, 215, 724, 1390, 1761, 3335, 3679 |
| CciI | TCATGA | 1 cut(s) | 181 |
| CfoI | GCGC | 2 cut(s) | 1825, 2703 |
| Cfr10I | RCCGGY | 1 cut(s) | 3149 |
| Cfr13I | GGNCC | 7 cut(s) | 93, 1300, 2002, 2025, 2241, 2435, 4088 |
| ClaI | ATCGAT | 1 cut(s) | 1547 |
| CseI | GACGC | 5 cut(s) | 94, 1177, 1351, 3355, 3866 |
| CspAI | ACCGGT | 1 cut(s) | 3149 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3679, 3714 |
| DraI | TTTAAA | 2 cut(s) | 1410, 4108 |
| DraIII | CACNNNGTG | 4 cut(s) | 251, 1591, 3050, 4037 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 91, 539 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 91, 539 |
| EaeI | YGGCCR | 4 cut(s) | 202, 1721, 1779, 4028 |
| Eam1104I | CTCTTC | 8 cut(s) | 1496, 1652, 1802, 1809, 2598, 3548, 3645, 4260 |
| EarI | CTCTTC | 8 cut(s) | 1496, 1652, 1802, 1809, 2598, 3548, 3645, 4260 |
| Ecl136II | GAGCTC | 1 cut(s) | 690 |
| Eco130I | CCWWGG | 8 cut(s) | 336, 664, 862, 1672, 1909, 2393, 3238, 3800 |
| Eco147I | AGGCCT | 1 cut(s) | 3716 |
| Eco24I | GRGCYC | 1 cut(s) | 692 |
| Eco31I | GGTCTC | 1 cut(s) | 1675 |
| Eco32I | GATATC | 1 cut(s) | 484 |
| Eco47I | GGWCC | 4 cut(s) | 93, 1300, 2025, 2241 |
| Eco47III | AGCGCT | 1 cut(s) | 1824 |
| Eco53kI | GAGCTC | 1 cut(s) | 690 |
| Eco57I | CTGAAG | 3 cut(s) | 160, 1826, 2121 |
| Eco88I | CYCGRG | 1 cut(s) | 1529 |
| Eco91I | GGTNACC | 2 cut(s) | 56, 1208 |
| EcoICRI | GAGCTC | 1 cut(s) | 690 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1307 |
| EcoO109I | RGGNCCY | 2 cut(s) | 93, 1300 |
| EcoO65I | GGTNACC | 2 cut(s) | 56, 1208 |
| EcoRI | GAATTC | 1 cut(s) | 380 |
| EcoRII | CCWGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| EcoRV | GATATC | 1 cut(s) | 484 |
| EcoT14I | CCWWGG | 8 cut(s) | 336, 664, 862, 1672, 1909, 2393, 3238, 3800 |
| EcoT38I | GRGCYC | 1 cut(s) | 692 |
| ErhI | CCWWGG | 8 cut(s) | 336, 664, 862, 1672, 1909, 2393, 3238, 3800 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 391, 423, 2940, 2972 |
| FaqI | GGGAC | 3 cut(s) | 682, 754, 1490 |
| FauNDI | CATATG | 1 cut(s) | 3379 |
| FblI | GTMKAC | 1 cut(s) | 493 |
| Fnu4HI | GCNGC | 9 cut(s) | 447, 1541, 1606, 1707, 2055, 2291, 2523, 2841, 4143 |
| FriOI | GRGCYC | 1 cut(s) | 692 |
| Fsp4HI | GCNGC | 9 cut(s) | 447, 1541, 1606, 1707, 2055, 2291, 2523, 2841, 4143 |
| FspBI | CTAG | 7 cut(s) | 560, 2774, 3110, 3122, 3245, 4190, 4239 |
| GlaI | GCGC | 2 cut(s) | 1824, 2702 |
| GluI | GCNGC | 9 cut(s) | 447, 1541, 1606, 1707, 2055, 2291, 2523, 2841, 4143 |
| GsaI | CCCAGC | 1 cut(s) | 3915 |
| GsuI | CTGGAG | 3 cut(s) | 177, 1012, 2254 |
| HaeII | RGCGCY | 2 cut(s) | 1826, 2704 |
| HapII | CCGG | 5 cut(s) | 594, 1034, 3150, 3684, 4178 |
| HgaI | GACGC | 5 cut(s) | 94, 1177, 1351, 3355, 3866 |
| HhaI | GCGC | 2 cut(s) | 1825, 2703 |
| Hin1I | GRCGYC | 2 cut(s) | 1362, 3347 |
| Hin6I | GCGC | 2 cut(s) | 1823, 2701 |
| HinP1I | GCGC | 2 cut(s) | 1823, 2701 |
| HincII | GTYRAC | 3 cut(s) | 84, 494, 2484 |
| HindII | GTYRAC | 3 cut(s) | 84, 494, 2484 |
| HindIII | AAGCTT | 1 cut(s) | 2226 |
| HpaII | CCGG | 5 cut(s) | 594, 1034, 3150, 3684, 4178 |
| HphI | GGTGA | 9 cut(s) | 50, 608, 1220, 1603, 1898, 3164, 3748, 3965, 4049 |
| Hpy166II | GTNNAC | 6 cut(s) | 84, 494, 1863, 2484, 2689, 2972 |
| Hpy8I | GTNNAC | 6 cut(s) | 84, 494, 1863, 2484, 2689, 2972 |
| Hpy99I | CGWCG | 2 cut(s) | 3409, 3537 |
| HpyCH4III | ACNGT | 5 cut(s) | 44, 636, 1184, 2143, 2818 |
| HpyCH4IV | ACGT | 5 cut(s) | 80, 223, 2555, 2789, 4041 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 210, 2111, 2522, 2840, 3011, 3355, 3883 |
| HpySE526I | ACGT | 5 cut(s) | 80, 223, 2555, 2789, 4041 |
| Hsp92I | GRCGYC | 2 cut(s) | 1362, 3347 |
| HspAI | GCGC | 2 cut(s) | 1823, 2701 |
| Kpn2I | TCCGGA | 2 cut(s) | 1033, 3683 |
| KpnI | GGTACC | 1 cut(s) | 821 |
| Lsp1109I | GCAGC | 7 cut(s) | 433, 1527, 2041, 2277, 2534, 2852, 4154 |
| LweI | GCATC | 8 cut(s) | 1342, 1441, 2086, 2576, 3391, 3772, 4065, 4333 |
| MaeI | CTAG | 7 cut(s) | 560, 2774, 3110, 3122, 3245, 4190, 4239 |
| MaeII | ACGT | 5 cut(s) | 80, 223, 2555, 2789, 4041 |
| MfeI | CAATTG | 7 cut(s) | 548, 822, 903, 1419, 2718, 3419, 3561 |
| MflI | RGATCY | 5 cut(s) | 1624, 2350, 2638, 2913, 4174 |
| MhlI | GDGCHC | 3 cut(s) | 692, 1443, 3596 |
| MlsI | TGGCCA | 2 cut(s) | 1781, 4030 |
| MluNI | TGGCCA | 2 cut(s) | 1781, 4030 |
| MlyI | GAGTC | 5 cut(s) | 1289, 1806, 2261, 2832, 3445 |
| Mox20I | TGGCCA | 2 cut(s) | 1781, 4030 |
| MroI | TCCGGA | 2 cut(s) | 1033, 3683 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1077, 3171, 3528 |
| MscI | TGGCCA | 2 cut(s) | 1781, 4030 |
| MslI | CAYNNNNRTG | 2 cut(s) | 570, 3951 |
| Msp20I | TGGCCA | 2 cut(s) | 1781, 4030 |
| MspA1I | CMGCKG | 1 cut(s) | 2290 |
| MspI | CCGG | 5 cut(s) | 594, 1034, 3150, 3684, 4178 |
| MspR9I | CCNGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| MunI | CAATTG | 7 cut(s) | 548, 822, 903, 1419, 2718, 3419, 3561 |
| Mva1269I | GAATGC | 2 cut(s) | 2887, 3327 |
| MvaI | CCWGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| MvnI | CGCG | 3 cut(s) | 1560, 1608, 1953 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 210, 2111, 2522, 2840, 3011, 3355, 3883 |
| NcoI | CCATGG | 1 cut(s) | 1672 |
| NdeI | CATATG | 1 cut(s) | 3379 |
| NlaIV | GGNNCC | 8 cut(s) | 112, 280, 819, 995, 1162, 1849, 3357, 4176 |
| NmeAIII | GCCGAG | 1 cut(s) | 2463 |
| NmuCI | GTSAC | 7 cut(s) | 56, 1208, 1904, 3878, 3953, 4037, 4097 |
| NspV | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| PaeI | GCATGC | 1 cut(s) | 3681 |
| PaeR7I | CTCGAG | 1 cut(s) | 1529 |
| PagI | TCATGA | 1 cut(s) | 181 |
| PaqCI | CACCTGC | 1 cut(s) | 4147 |
| PasI | CCCWGGG | 1 cut(s) | 3009 |
| PceI | AGGCCT | 1 cut(s) | 3716 |
| PciI | ACATGT | 6 cut(s) | 124, 1260, 1271, 2962, 3946, 4101 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1183 |
| PctI | GAATGC | 2 cut(s) | 2887, 3327 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1077, 3171, 3528 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 128, 200, 614, 2186, 2932, 3015 |
| PfoI | TCCNGGA | 1 cut(s) | 4065 |
| PinAI | ACCGGT | 1 cut(s) | 3149 |
| PkrI | GCNGC | 9 cut(s) | 448, 1542, 1607, 1708, 2056, 2292, 2524, 2842, 4144 |
| PleI | GAGTC | 5 cut(s) | 1288, 1805, 2261, 2831, 3445 |
| PpsI | GAGTC | 5 cut(s) | 1288, 1805, 2261, 2831, 3445 |
| PpuMI | RGGWCCY | 2 cut(s) | 93, 1300 |
| PscI | ACATGT | 6 cut(s) | 124, 1260, 1271, 2962, 3946, 4101 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3570 |
| PsiI | TTATAA | 1 cut(s) | 798 |
| Psp124BI | GAGCTC | 1 cut(s) | 692 |
| Psp1406I | AACGTT | 2 cut(s) | 223, 2789 |
| Psp5II | RGGWCCY | 2 cut(s) | 93, 1300 |
| Psp6I | CCWGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| PspEI | GGTNACC | 2 cut(s) | 56, 1208 |
| PspFI | CCCAGC | 1 cut(s) | 3911 |
| PspGI | CCWGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| PspN4I | GGNNCC | 8 cut(s) | 112, 280, 819, 995, 1162, 1849, 3357, 4176 |
| PspPI | GGNCC | 7 cut(s) | 93, 1300, 2002, 2025, 2241, 2435, 4088 |
| PspPPI | RGGWCCY | 2 cut(s) | 93, 1300 |
| PstI | CTGCAG | 1 cut(s) | 1994 |
| PsuI | RGATCY | 5 cut(s) | 1624, 2350, 2638, 2913, 4174 |
| PvuII | CAGCTG | 1 cut(s) | 2290 |
| RseI | CAYNNNNRTG | 2 cut(s) | 570, 3951 |
| SacI | GAGCTC | 1 cut(s) | 692 |
| SalI | GTCGAC | 1 cut(s) | 492 |
| SatI | GCNGC | 9 cut(s) | 447, 1541, 1606, 1707, 2055, 2291, 2523, 2841, 4143 |
| Sau96I | GGNCC | 7 cut(s) | 93, 1300, 2002, 2025, 2241, 2435, 4088 |
| ScaI | AGTACT | 1 cut(s) | 1580 |
| SchI | GAGTC | 5 cut(s) | 1289, 1806, 2261, 2832, 3445 |
| ScrFI | CCNGG | 4 cut(s) | 1651, 3010, 4067, 4320 |
| SduI | GDGCHC | 3 cut(s) | 692, 1443, 3596 |
| SfaNI | GCATC | 8 cut(s) | 1342, 1441, 2086, 2576, 3391, 3772, 4065, 4333 |
| SfcI | CTRYAG | 2 cut(s) | 1990, 3837 |
| Sfr274I | CTCGAG | 1 cut(s) | 1529 |
| SfuI | TTCGAA | 3 cut(s) | 1499, 2476, 2559 |
| SinI | GGWCC | 4 cut(s) | 93, 1300, 2025, 2241 |
| SlaI | CTCGAG | 1 cut(s) | 1529 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 570, 3951 |
| SmlI | CTYRAG | 2 cut(s) | 1529, 3227 |
| SmoI | CTYRAG | 2 cut(s) | 1529, 3227 |
| SphI | GCATGC | 1 cut(s) | 3681 |
| SseBI | AGGCCT | 1 cut(s) | 3716 |
| SsiI | CCGC | 7 cut(s) | 61, 1606, 1707, 1858, 1953, 2977, 4308 |
| SspI | AATATT | 3 cut(s) | 3273, 3293, 3832 |
| SspMI | CTAG | 7 cut(s) | 560, 2774, 3110, 3122, 3245, 4190, 4239 |
| SstI | GAGCTC | 1 cut(s) | 692 |
| StuI | AGGCCT | 1 cut(s) | 3716 |
| StyD4I | CCNGG | 4 cut(s) | 1649, 3008, 4065, 4318 |
| StyI | CCWWGG | 8 cut(s) | 336, 664, 862, 1672, 1909, 2393, 3238, 3800 |
| TaaI | ACNGT | 5 cut(s) | 44, 636, 1184, 2143, 2818 |
| TaiI | ACGT | 5 cut(s) | 83, 226, 2558, 2792, 4044 |
| TatI | WGTACW | 4 cut(s) | 1018, 1578, 3557, 3579 |
| TauI | GCSGC | 2 cut(s) | 1608, 1709 |
| TscAI | CASTG | 6 cut(s) | 49, 1809, 1870, 4102, 4219, 4345 |
| TseFI | GTSAC | 7 cut(s) | 56, 1208, 1904, 3878, 3953, 4037, 4097 |
| TseI | GCWGC | 7 cut(s) | 446, 1540, 2054, 2290, 2522, 2840, 4142 |
| Tsp45I | GTSAC | 7 cut(s) | 56, 1208, 1904, 3878, 3953, 4037, 4097 |
| TspGWI | ACGGA | 5 cut(s) | 2132, 2462, 3006, 3188, 3803 |
| TspRI | CASTG | 6 cut(s) | 49, 1809, 1870, 4102, 4219, 4345 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 128, 200, 614, 2186, 2932, 3015 |
| VpaK11BI | GGWCC | 4 cut(s) | 93, 1300, 2025, 2241 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1307 |
| XbaI | TCTAGA | 3 cut(s) | 559, 3244, 4189 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1470 |
| XhoI | CTCGAG | 1 cut(s) | 1529 |
| XmiI | GTMKAC | 1 cut(s) | 493 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1077, 3171, 3528 |
| XspI | CTAG | 7 cut(s) | 560, 2774, 3110, 3122, 3245, 4190, 4239 |
| ZrmI | AGTACT | 1 cut(s) | 1580 |