Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 37 |
| AccB1I | GGYRCC | 2 cut(s) | 37, 638 |
| AciI | CCGC | 3 cut(s) | 62, 642, 984 |
| AclWI | GGATC | 3 cut(s) | 287, 641, 794 |
| AcsI | RAATTY | 2 cut(s) | 827, 1334 |
| AcvI | CACGTG | 1 cut(s) | 470 |
| AdeI | CACNNNGTG | 1 cut(s) | 473 |
| AfaI | GTAC | 5 cut(s) | 39, 511, 857, 1070, 1091 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AflIII | ACRYGT | 2 cut(s) | 402, 1014 |
| AgeI | ACCGGT | 1 cut(s) | 635 |
| AgsI | TTSAA | 6 cut(s) | 617, 793, 805, 824, 832, 1293 |
| AhlI | ACTAGT | 1 cut(s) | 512 |
| AjiI | CACGTC | 1 cut(s) | 1015 |
| AjnI | CCWGG | 1 cut(s) | 1136 |
| AluBI | AGCT | 8 cut(s) | 560, 613, 671, 1075, 1106, 1115, 1289, 1393 |
| AluI | AGCT | 8 cut(s) | 560, 613, 671, 1075, 1106, 1115, 1289, 1393 |
| Alw21I | GWGCWC | 2 cut(s) | 523, 813 |
| Alw26I | GTCTC | 2 cut(s) | 393, 908 |
| Alw44I | GTGCAC | 1 cut(s) | 519 |
| AlwI | GGATC | 3 cut(s) | 287, 641, 794 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1183 |
| AoxI | GGCC | 2 cut(s) | 53, 1134 |
| ApaLI | GTGCAC | 1 cut(s) | 519 |
| ApeKI | GCWGC | 2 cut(s) | 668, 941 |
| ApoI | RAATTY | 2 cut(s) | 827, 1334 |
| AsiGI | ACCGGT | 1 cut(s) | 635 |
| Asp718I | GGTACC | 1 cut(s) | 37 |
| AspLEI | GCGC | 1 cut(s) | 15 |
| AspS9I | GGNCC | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 3 cut(s) | 440, 485, 1010 |
| AsuII | TTCGAA | 1 cut(s) | 1158 |
| AvaII | GGWCC | 1 cut(s) | 72 |
| AxyI | CCTNAGG | 1 cut(s) | 57 |
| BaeGI | GKGCMC | 1 cut(s) | 523 |
| BanI | GGYRCC | 2 cut(s) | 37, 638 |
| BauI | CACGAG | 2 cut(s) | 8, 1110 |
| BbrPI | CACGTG | 1 cut(s) | 470 |
| BbsI | GAAGAC | 2 cut(s) | 348, 1017 |
| Bbv12I | GWGCWC | 2 cut(s) | 523, 813 |
| BbvI | GCAGC | 2 cut(s) | 680, 953 |
| BccI | CCATC | 3 cut(s) | 247, 351, 419 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 754, 788, 875, 909, 1148, 1182, 1216, 1250 |
| BciT130I | CCWGG | 1 cut(s) | 1138 |
| BcoDI | GTCTC | 2 cut(s) | 393, 908 |
| BcuI | ACTAGT | 1 cut(s) | 512 |
| BfaI | CTAG | 1 cut(s) | 513 |
| BisI | GCNGC | 3 cut(s) | 642, 669, 942 |
| BlsI | GCNGC | 3 cut(s) | 643, 670, 943 |
| Bme1390I | CCNGG | 1 cut(s) | 1138 |
| Bme18I | GGWCC | 1 cut(s) | 72 |
| BmgBI | CACGTC | 1 cut(s) | 1015 |
| BmgT120I | GGNCC | 1 cut(s) | 72 |
| BmiI | GGNNCC | 2 cut(s) | 39, 640 |
| BmrFI | CCNGG | 1 cut(s) | 1138 |
| BmsI | GCATC | 4 cut(s) | 196, 454, 691, 703 |
| BoxI | GACNNNNGTC | 1 cut(s) | 234 |
| BpiI | GAAGAC | 2 cut(s) | 348, 1017 |
| BpmI | CTGGAG | 1 cut(s) | 1275 |
| Bpu14I | TTCGAA | 1 cut(s) | 1158 |
| BsaAI | YACGTR | 1 cut(s) | 470 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| BsaWI | WCCGGW | 4 cut(s) | 40, 124, 587, 635 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 119, 122, 149, 152, 1248, 1278, 1338, 1368 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| Bse118I | RCCGGY | 1 cut(s) | 635 |
| Bse1I | ACTGG | 2 cut(s) | 899, 1258 |
| Bse21I | CCTNAGG | 1 cut(s) | 57 |
| BseBI | CCWGG | 1 cut(s) | 1138 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseGI | GGATG | 5 cut(s) | 367, 706, 930, 979, 1332 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 3 cut(s) | 48, 696, 1379 |
| BseNI | ACTGG | 2 cut(s) | 899, 1258 |
| BseRI | GAGGAG | 2 cut(s) | 143, 464 |
| BseSI | GKGCMC | 1 cut(s) | 523 |
| BseXI | GCAGC | 2 cut(s) | 680, 953 |
| BshFI | GGCC | 2 cut(s) | 55, 1136 |
| BshNI | GGYRCC | 2 cut(s) | 37, 638 |
| BshTI | ACCGGT | 1 cut(s) | 635 |
| BsiHKAI | GWGCWC | 2 cut(s) | 523, 813 |
| BsiSI | CCGG | 4 cut(s) | 41, 125, 588, 636 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmAI | GTCTC | 2 cut(s) | 393, 908 |
| BsmBI | CGTCTC | 1 cut(s) | 908 |
| BsmI | GAATGC | 2 cut(s) | 121, 442 |
| BsnI | GGCC | 2 cut(s) | 55, 1136 |
| Bsp119I | TTCGAA | 1 cut(s) | 1158 |
| Bsp1286I | GDGCHC | 2 cut(s) | 523, 813 |
| Bsp1407I | TGTACA | 1 cut(s) | 1068 |
| Bsp143I | GATC | 4 cut(s) | 292, 646, 771, 786 |
| BspACI | CCGC | 3 cut(s) | 62, 642, 984 |
| BspANI | GGCC | 2 cut(s) | 55, 1136 |
| BspCNI | CTCAG | 3 cut(s) | 49, 697, 1378 |
| BspHI | TCATGA | 1 cut(s) | 630 |
| BspLI | GGNNCC | 2 cut(s) | 39, 640 |
| BspPI | GGATC | 3 cut(s) | 287, 641, 794 |
| BspQI | GCTCTTC | 1 cut(s) | 603 |
| BspT104I | TTCGAA | 1 cut(s) | 1158 |
| BspT107I | GGYRCC | 2 cut(s) | 37, 638 |
| BsrFI | RCCGGY | 1 cut(s) | 635 |
| BsrGI | TGTACA | 1 cut(s) | 1068 |
| BsrI | ACTGG | 2 cut(s) | 899, 1258 |
| BssAI | RCCGGY | 1 cut(s) | 635 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssMI | GATC | 4 cut(s) | 292, 646, 771, 786 |
| BssSI | CACGAG | 2 cut(s) | 8, 1110 |
| BssT1I | CCWWGG | 1 cut(s) | 102 |
| Bst2BI | CACGAG | 2 cut(s) | 8, 1110 |
| Bst2UI | CCWGG | 1 cut(s) | 1138 |
| Bst4CI | ACNGT | 4 cut(s) | 157, 284, 323, 1094 |
| Bst6I | CTCTTC | 1 cut(s) | 603 |
| BstAUI | TGTACA | 1 cut(s) | 1068 |
| BstBAI | YACGTR | 1 cut(s) | 470 |
| BstBI | TTCGAA | 1 cut(s) | 1158 |
| BstDEI | CTNAG | 3 cut(s) | 57, 705, 1365 |
| BstF5I | GGATG | 5 cut(s) | 367, 706, 930, 979, 1332 |
| BstHHI | GCGC | 1 cut(s) | 15 |
| BstKTI | GATC | 4 cut(s) | 295, 649, 774, 789 |
| BstMAI | GTCTC | 2 cut(s) | 393, 908 |
| BstMBI | GATC | 4 cut(s) | 292, 646, 771, 786 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 701, 902, 941, 1112, 1370 |
| BstNI | CCWGG | 1 cut(s) | 1138 |
| BstNSI | RCATGY | 2 cut(s) | 194, 406 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 234 |
| BstSCI | CCNGG | 1 cut(s) | 1136 |
| BstSLI | GKGCMC | 1 cut(s) | 523 |
| BstV1I | GCAGC | 2 cut(s) | 680, 953 |
| BstV2I | GAAGAC | 2 cut(s) | 348, 1017 |
| BstX2I | RGATCY | 1 cut(s) | 786 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 869, 1116 |
| BstYI | RGATCY | 1 cut(s) | 786 |
| Bsu36I | CCTNAGG | 1 cut(s) | 57 |
| BsuRI | GGCC | 2 cut(s) | 55, 1136 |
| BtrI | CACGTC | 1 cut(s) | 1015 |
| BtsCI | GGATG | 5 cut(s) | 367, 706, 930, 979, 1332 |
| BtsI | GCAGTG | 1 cut(s) | 114 |
| BtsIMutI | CAGTG | 3 cut(s) | 114, 268, 906 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1183 |
| CciI | TCATGA | 1 cut(s) | 630 |
| CfoI | GCGC | 1 cut(s) | 15 |
| Cfr10I | RCCGGY | 1 cut(s) | 635 |
| Cfr13I | GGNCC | 1 cut(s) | 72 |
| Csp6I | GTAC | 5 cut(s) | 38, 510, 856, 1069, 1090 |
| CspAI | ACCGGT | 1 cut(s) | 635 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 552, 587 |
| CviAII | CATG | 7 cut(s) | 191, 239, 403, 625, 631, 869, 995 |
| CviQI | GTAC | 5 cut(s) | 38, 510, 856, 1069, 1090 |
| DdeI | CTNAG | 3 cut(s) | 57, 705, 1365 |
| DpnI | GATC | 4 cut(s) | 294, 648, 773, 788 |
| DpnII | GATC | 4 cut(s) | 292, 646, 771, 786 |
| DraI | TTTAAA | 1 cut(s) | 1285 |
| DraIII | CACNNNGTG | 1 cut(s) | 473 |
| Eam1104I | CTCTTC | 1 cut(s) | 603 |
| EarI | CTCTTC | 1 cut(s) | 603 |
| Eco130I | CCWWGG | 1 cut(s) | 102 |
| Eco147I | AGGCCT | 1 cut(s) | 1136 |
| Eco32I | GATATC | 1 cut(s) | 445 |
| Eco47I | GGWCC | 1 cut(s) | 72 |
| Eco72I | CACGTG | 1 cut(s) | 470 |
| Eco81I | CCTNAGG | 1 cut(s) | 57 |
| EcoRII | CCWGG | 1 cut(s) | 1136 |
| EcoRV | GATATC | 1 cut(s) | 445 |
| EcoT14I | CCWWGG | 1 cut(s) | 102 |
| ErhI | CCWWGG | 1 cut(s) | 102 |
| Esp3I | CGTCTC | 1 cut(s) | 908 |
| FaeI | CATG | 7 cut(s) | 194, 242, 406, 628, 634, 872, 998 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 773, 805 |
| FatI | CATG | 7 cut(s) | 190, 238, 402, 624, 630, 868, 994 |
| Fnu4HI | GCNGC | 3 cut(s) | 642, 669, 942 |
| FokI | GGATG | 5 cut(s) | 374, 713, 937, 986, 1339 |
| Fsp4HI | GCNGC | 3 cut(s) | 642, 669, 942 |
| FspBI | CTAG | 1 cut(s) | 513 |
| GlaI | GCGC | 1 cut(s) | 14 |
| GluI | GCNGC | 3 cut(s) | 642, 669, 942 |
| GsuI | CTGGAG | 1 cut(s) | 1275 |
| HaeIII | GGCC | 2 cut(s) | 55, 1136 |
| HapII | CCGG | 4 cut(s) | 41, 125, 588, 636 |
| HhaI | GCGC | 1 cut(s) | 15 |
| Hin1II | CATG | 7 cut(s) | 194, 242, 406, 628, 634, 872, 998 |
| Hin6I | GCGC | 1 cut(s) | 13 |
| HinP1I | GCGC | 1 cut(s) | 13 |
| HincII | GTYRAC | 1 cut(s) | 319 |
| HindII | GTYRAC | 1 cut(s) | 319 |
| HindIII | AAGCTT | 3 cut(s) | 1073, 1287, 1391 |
| HinfI | GANTC | 6 cut(s) | 4, 44, 235, 269, 549, 1180 |
| HpaII | CCGG | 4 cut(s) | 41, 125, 588, 636 |
| HphI | GGTGA | 3 cut(s) | 440, 485, 1010 |
| Hpy166II | GTNNAC | 6 cut(s) | 72, 196, 319, 521, 1069, 1188 |
| Hpy188I | TCNGA | 5 cut(s) | 28, 205, 604, 651, 1368 |
| Hpy188III | TCNNGA | 4 cut(s) | 543, 631, 793, 1410 |
| Hpy8I | GTNNAC | 6 cut(s) | 72, 196, 319, 521, 1069, 1188 |
| HpyAV | CCTTC | 8 cut(s) | 500, 587, 685, 1145, 1188, 1199, 1294, 1363 |
| HpyCH4III | ACNGT | 4 cut(s) | 157, 284, 323, 1094 |
| HpyCH4IV | ACGT | 2 cut(s) | 469, 1014 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 701, 902, 941, 1112, 1370 |
| HpyF3I | CTNAG | 3 cut(s) | 57, 705, 1365 |
| HpySE526I | ACGT | 2 cut(s) | 469, 1014 |
| Hsp92II | CATG | 7 cut(s) | 194, 242, 406, 628, 634, 872, 998 |
| HspAI | GCGC | 1 cut(s) | 13 |
| KpnI | GGTACC | 1 cut(s) | 41 |
| Kzo9I | GATC | 4 cut(s) | 292, 646, 771, 786 |
| LguI | GCTCTTC | 1 cut(s) | 603 |
| LmnI | GCTCC | 4 cut(s) | 20, 565, 1111, 1197 |
| Lsp1109I | GCAGC | 2 cut(s) | 680, 953 |
| LweI | GCATC | 4 cut(s) | 196, 454, 691, 703 |
| MaeI | CTAG | 1 cut(s) | 513 |
| MaeII | ACGT | 2 cut(s) | 469, 1014 |
| MalI | GATC | 4 cut(s) | 294, 648, 773, 788 |
| MboI | GATC | 4 cut(s) | 292, 646, 771, 786 |
| MflI | RGATCY | 1 cut(s) | 786 |
| MhlI | GDGCHC | 2 cut(s) | 523, 813 |
| MluCI | AATT | 7 cut(s) | 309, 497, 827, 1001, 1211, 1218, 1334 |
| MlyI | GAGTC | 3 cut(s) | 244, 278, 1174 |
| MmeI | TCCRAC | 1 cut(s) | 951 |
| MseI | TTAA | 5 cut(s) | 86, 780, 1217, 1244, 1284 |
| MslI | CAYNNNNRTG | 2 cut(s) | 243, 629 |
| MspA1I | CMGCKG | 1 cut(s) | 644 |
| MspI | CCGG | 4 cut(s) | 41, 125, 588, 636 |
| MspR9I | CCNGG | 1 cut(s) | 1138 |
| Mva1269I | GAATGC | 2 cut(s) | 121, 442 |
| MvaI | CCWGG | 1 cut(s) | 1138 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 701, 902, 941, 1112, 1370 |
| NdeII | GATC | 4 cut(s) | 292, 646, 771, 786 |
| NlaIII | CATG | 7 cut(s) | 194, 242, 406, 628, 634, 872, 998 |
| NlaIV | GGNNCC | 2 cut(s) | 39, 640 |
| NmeAIII | GCCGAG | 1 cut(s) | 817 |
| NspI | RCATGY | 2 cut(s) | 194, 406 |
| NspV | TTCGAA | 1 cut(s) | 1158 |
| PagI | TCATGA | 1 cut(s) | 630 |
| PceI | AGGCCT | 1 cut(s) | 1136 |
| PciI | ACATGT | 1 cut(s) | 402 |
| PciSI | GCTCTTC | 1 cut(s) | 603 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1155 |
| PctI | GAATGC | 2 cut(s) | 121, 442 |
| PfeI | GAWTC | 3 cut(s) | 4, 44, 549 |
| PinAI | ACCGGT | 1 cut(s) | 635 |
| PkrI | GCNGC | 3 cut(s) | 643, 670, 943 |
| PleI | GAGTC | 3 cut(s) | 243, 277, 1174 |
| PmaCI | CACGTG | 1 cut(s) | 470 |
| PmlI | CACGTG | 1 cut(s) | 470 |
| PpsI | GAGTC | 3 cut(s) | 243, 277, 1174 |
| Ppu21I | YACGTR | 1 cut(s) | 470 |
| PscI | ACATGT | 1 cut(s) | 402 |
| PshAI | GACNNNNGTC | 1 cut(s) | 234 |
| Psp6I | CCWGG | 1 cut(s) | 1136 |
| PspCI | CACGTG | 1 cut(s) | 470 |
| PspGI | CCWGG | 1 cut(s) | 1136 |
| PspN4I | GGNNCC | 2 cut(s) | 39, 640 |
| PspPI | GGNCC | 1 cut(s) | 72 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1052, 1084 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1183 |
| PsuI | RGATCY | 1 cut(s) | 786 |
| RsaI | GTAC | 5 cut(s) | 39, 511, 857, 1070, 1091 |
| RsaNI | GTAC | 5 cut(s) | 38, 510, 856, 1069, 1090 |
| RseI | CAYNNNNRTG | 2 cut(s) | 243, 629 |
| SapI | GCTCTTC | 1 cut(s) | 603 |
| SaqAI | TTAA | 5 cut(s) | 86, 780, 1217, 1244, 1284 |
| SatI | GCNGC | 3 cut(s) | 642, 669, 942 |
| Sau3AI | GATC | 4 cut(s) | 292, 646, 771, 786 |
| Sau96I | GGNCC | 1 cut(s) | 72 |
| SchI | GAGTC | 3 cut(s) | 244, 278, 1174 |
| ScrFI | CCNGG | 1 cut(s) | 1138 |
| SduI | GDGCHC | 2 cut(s) | 523, 813 |
| SfaNI | GCATC | 4 cut(s) | 196, 454, 691, 703 |
| SfuI | TTCGAA | 1 cut(s) | 1158 |
| SinI | GGWCC | 1 cut(s) | 72 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 243, 629 |
| SpeI | ACTAGT | 1 cut(s) | 512 |
| Sse9I | AATT | 7 cut(s) | 309, 497, 827, 1001, 1211, 1218, 1334 |
| SseBI | AGGCCT | 1 cut(s) | 1136 |
| SsiI | CCGC | 3 cut(s) | 62, 642, 984 |
| SspMI | CTAG | 1 cut(s) | 513 |
| StuI | AGGCCT | 1 cut(s) | 1136 |
| StyD4I | CCNGG | 1 cut(s) | 1136 |
| StyI | CCWWGG | 1 cut(s) | 102 |
| TaaI | ACNGT | 4 cut(s) | 157, 284, 323, 1094 |
| TaiI | ACGT | 2 cut(s) | 472, 1017 |
| TaqI | TCGA | 3 cut(s) | 447, 1158, 1236 |
| TasI | AATT | 7 cut(s) | 309, 497, 827, 1001, 1211, 1218, 1334 |
| TatI | WGTACW | 1 cut(s) | 1068 |
| TauI | GCSGC | 1 cut(s) | 644 |
| TfiI | GAWTC | 3 cut(s) | 4, 44, 549 |
| Tru1I | TTAA | 5 cut(s) | 86, 780, 1217, 1244, 1284 |
| Tru9I | TTAA | 5 cut(s) | 86, 780, 1217, 1244, 1284 |
| TscAI | CASTG | 3 cut(s) | 114, 268, 906 |
| TseI | GCWGC | 2 cut(s) | 668, 941 |
| TspGWI | ACGGA | 1 cut(s) | 828 |
| TspRI | CASTG | 3 cut(s) | 114, 268, 906 |
| VneI | GTGCAC | 1 cut(s) | 519 |
| VpaK11BI | GGWCC | 1 cut(s) | 72 |
| XapI | RAATTY | 2 cut(s) | 827, 1334 |
| XceI | RCATGY | 2 cut(s) | 194, 406 |
| XspI | CTAG | 1 cut(s) | 513 |