RchiOBHm_Chr1g0330731

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000154
Physical Location & Seq
Reverse (-)
20512086 .. 20513862
1777 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55987

Sequence Viewer

Length: 1581 bp
ATGGCCACAGAATCAAATTTTGTGCAGCCTTCGATCCCAAAGTTCGATGGTCATTATGACCATTGGAGTATGCTCATGGAAAACTTCATGCGGTCAAAGGAGTACTGGTGTGTTGTTGAAAATGAAGTCCGTGAACCAGTAGCTGGAGTTGCACAGACAGAGGTTCAGCAGAAGAAGTTGGAGGAGTTGAAGTTGAAAGATCTCAAGGCTAAGAACTATCTGTTTCAAGCAATTGATCGTGATCTTTTGGAGACCATTCTCCAAAAGGACACATCGAAACAGATTTGGGATGCCATGAAGCAGAAATATCAGGGGTCCACAAGAGTGAAAAGGCAGCAGCTGCAAGCTCTTCGCAAGGAGTTTGAGGTTCTCCACATGAAGGAAGGAGAATCTGTTGATGAAATGAAGAGCAATTACTTGGAGAAGCAAGCATTGAAGGTATCCACAAATTGGAGAAATTTTGGTAGAGGTCGAGGATGGTTCCGGGGAGGACGAGGAAGAGGCAGAGGAGGCTTTGATGGTGGCAGAGGAAGCTTCGATAAGTCCAATGTCGAATGCTATCGATGTCATGGATATGGCCACTTCAAATCTGAATGCACCTCTAATTTGCATTATGGTAGAGGAGAGAAAGCTAATTTTGCAGAGAAAGAAGAGAAGGAGGAAGAAATTTTGTTGATGGCATATCATGAGGGGACAAATACAGATGTGTGGTACTTAGACTCTGGTTGCAGCAATCATATGTGCGGTAACAAGTACTTATTTTCAGATTATGATGAATTCTTCAAAGATACTATGAAGCTTGGAAATGATGCTAAGATGACTGTTGTGGGGAAGGGCAATATCAAACTGAAAATTGGAGGTCATGTTGTTAAAATCTGTGATGTTTTCTACGTCCCAGACTTGAAGAGCAACCTCATCAGTATTGGGCAGTTGCAAGAAAAGGGATACACGATCATTATGAGGAAAGGCTGCTGCCAAATCATGCATCCAGAAAAAGGACTGATAGCTCAGGTTACCATGACAACAAACCGTATGTTTCCTCTACACATCCAACATGATATTCAAACTTGTTACACTATGCAAATGTCAGATGCATCATGGCTGTGGCATATGCGTTATGGTCATCTTAATTTCAATTGCTTGAGAACGCTGCAACAAAGGAGTTTAGTGACAGGTCTTCCTCATATCACTTGTTCTACTAGAGTGTGTGAAGAGTGTGTAATTGGGAAGCAACACCGAGACCCATTTCCGAAAGCAGGAGCATGGAGAGCCAAAACGGTACTGCAGCTTGTTCATTTAGACATATGTGGTCCCATCCATCCAGTCTCAAATGGAAACAAAAGGTACTTTATTACTTTTACTGATGACTTTAGTAGAAAGACATGGGTATACTTCATGGAGCAGAAGTCTGAGGCTTTTGGTGTGTTTAAAAGTTTTAAGACTCTAGTGGAGAAAGAGTCTGGGAAGGAAATTAAGATTCTTCGGTATGATCGTGGTGGTGAATATAACTCAAGTGCATTTATGAGTTTCTGTGCTTCTTATGGCATTCGCAGGCAACTGACAACAGCCTACTCACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve zf-CCHC

Protein Analysis

526

Amino Acids

60.88

Weight (kDa)

8.95

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 26 - 137 9.1e-14 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 237 - 316 6.2e-30 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 355 - 411 2.4e-15 GAG-pre-integrase domain
rve PF00665 428 - 526 1.2e-15 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 143, 450
AccI GTMKAC 1 cut(s) 1389
AciI CCGC 2 cut(s) 91, 744
AclWI GGATC 1 cut(s) 28
AcoI YGGCCR 2 cut(s) 3, 577
AcsI RAATTY 4 cut(s) 16, 457, 666, 776
AfaI GTAC 5 cut(s) 104, 713, 755, 1281, 1346
AfiI CCNNNNNNNGG 5 cut(s) 143, 379, 450, 995, 1256
AjuI GAANNNNNNNTTGG 2 cut(s) 1044, 1076
AleI CACNNNNGTG 1 cut(s) 323
AluBI AGCT 8 cut(s) 143, 340, 347, 534, 632, 799, 1007, 1288
AluI AGCT 8 cut(s) 143, 340, 347, 534, 632, 799, 1007, 1288
Alw26I GTCTC 3 cut(s) 245, 1233, 1330
AlwI GGATC 1 cut(s) 28
AlwNI CAGNNNCTG 2 cut(s) 143, 340
AoxI GGCC 2 cut(s) 3, 577
ApeKI GCWGC 9 cut(s) 25, 334, 337, 340, 729, 969, 972, 1150, 1285
ApoI RAATTY 4 cut(s) 16, 457, 666, 776
AspS9I GGNCC 2 cut(s) 315, 1310
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 2 cut(s) 1511, 1566
AvaII GGWCC 2 cut(s) 315, 1310
BalI TGGCCA 2 cut(s) 5, 579
BarI GAAGNNNNNNTAC 2 cut(s) 398, 430
BbsI GAAGAC 1 cut(s) 1169
BbvI GCAGC 9 cut(s) 37, 327, 346, 349, 741, 956, 959, 1137, 1297
BccI CCATC 6 cut(s) 41, 471, 512, 670, 1322, 1326
BcgI CGANNNNNNTGC 2 cut(s) 332, 366
BciVI GTATCC 2 cut(s) 451, 938
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 3 cut(s) 245, 1233, 1330
BfaI CTAG 2 cut(s) 1200, 1445
BfmI CTRYAG 1 cut(s) 1283
BfuI GTATCC 2 cut(s) 451, 938
BglII AGATCT 1 cut(s) 199
BisI GCNGC 9 cut(s) 26, 335, 338, 341, 730, 970, 973, 1151, 1286
BlsI GCNGC 9 cut(s) 27, 336, 339, 342, 731, 971, 974, 1152, 1287
BmcAI AGTACT 2 cut(s) 104, 755
Bme1390I CCNGG 1 cut(s) 485
Bme18I GGWCC 2 cut(s) 315, 1310
BmgT120I GGNCC 2 cut(s) 315, 1310
BmiI GGNNCC 3 cut(s) 316, 482, 1312
BmrFI CCNGG 1 cut(s) 485
BmsI GCATC 5 cut(s) 280, 799, 994, 1081, 1103
BpiI GAAGAC 1 cut(s) 1169
BpmI CTGGAG 1 cut(s) 165
Bpu10I CCTNAGC 1 cut(s) 1008
BpuEI CTTGAG 3 cut(s) 188, 1162, 1495
BpuMI CCSGG 1 cut(s) 485
Bsa29I ATCGAT 1 cut(s) 562
BsaBI GATNNNNATC 1 cut(s) 240
BsaI GGTCTC 2 cut(s) 245, 1233
BsaJI CCNNGG 1 cut(s) 484
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 379, 450, 995, 1256
Bse1I ACTGG 3 cut(s) 110, 137, 1322
Bse8I GATNNNNATC 1 cut(s) 240
BseCI ATCGAT 1 cut(s) 562
BseDI CCNNGG 1 cut(s) 484
BseGI GGATG 6 cut(s) 295, 482, 985, 1047, 1314, 1318
BseJI GATNNNNATC 1 cut(s) 240
BseLI CCNNNNNNNGG 5 cut(s) 143, 379, 450, 995, 1256
BseMII CTCAG 2 cut(s) 1022, 1401
BseNI ACTGG 3 cut(s) 110, 137, 1322
BseRI GAGGAG 3 cut(s) 197, 522, 636
BseXI GCAGC 9 cut(s) 37, 327, 346, 349, 741, 956, 959, 1137, 1297
BsgI GTGCAG 1 cut(s) 44
BshFI GGCC 2 cut(s) 5, 579
BshVI ATCGAT 1 cut(s) 562
BsiSI CCGG 1 cut(s) 484
BslFI GGGAC 3 cut(s) 706, 878, 1296
BslI CCNNNNNNNGG 5 cut(s) 143, 379, 450, 995, 1256
BsmAI GTCTC 3 cut(s) 245, 1233, 1330
BsmFI GGGAC 3 cut(s) 706, 878, 1296
BsmI GAATGC 3 cut(s) 560, 599, 1545
BsnI GGCC 2 cut(s) 5, 579
Bso31I GGTCTC 2 cut(s) 245, 1233
Bsp143I GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
BspACI CCGC 2 cut(s) 91, 744
BspANI GGCC 2 cut(s) 5, 579
BspCNI CTCAG 2 cut(s) 1021, 1402
BspDI ATCGAT 1 cut(s) 562
BspHI TCATGA 1 cut(s) 685
BspLI GGNNCC 3 cut(s) 316, 482, 1312
BspMAI CTGCAG 1 cut(s) 1287
BspPI GGATC 1 cut(s) 28
BspQI GCTCTTC 3 cut(s) 354, 401, 899
BspTNI GGTCTC 2 cut(s) 245, 1233
BsrI ACTGG 3 cut(s) 110, 137, 1322
BssECI CCNNGG 1 cut(s) 484
BssMI GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
BssNAI GTATAC 1 cut(s) 1390
Bst1107I GTATAC 1 cut(s) 1390
Bst4CI ACNGT 3 cut(s) 823, 1031, 1279
Bst6I CTCTTC 6 cut(s) 354, 401, 493, 645, 899, 1206
BstAPI GCANNNNNTGC 1 cut(s) 340
BstC8I GCNNGC 3 cut(s) 345, 429, 1553
BstDEI CTNAG 5 cut(s) 210, 715, 813, 1008, 1410
BstEII GGTNACC 1 cut(s) 1012
BstF5I GGATG 6 cut(s) 295, 482, 985, 1047, 1314, 1318
BstKTI GATC 6 cut(s) 36, 202, 238, 244, 954, 1492
BstMAI GTCTC 3 cut(s) 245, 1233, 1330
BstMBI GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
BstMWI GCNNNNNNNGC 6 cut(s) 149, 340, 510, 531, 638, 1268
BstPI GGTNACC 1 cut(s) 1012
BstSCI CCNGG 1 cut(s) 483
BstSFI CTRYAG 1 cut(s) 1283
BstV1I GCAGC 9 cut(s) 37, 327, 346, 349, 741, 956, 959, 1137, 1297
BstV2I GAAGAC 1 cut(s) 1169
BstX2I RGATCY 1 cut(s) 199
BstYI RGATCY 1 cut(s) 199
BstZ17I GTATAC 1 cut(s) 1390
Bsu15I ATCGAT 1 cut(s) 562
BsuI GTATCC 2 cut(s) 451, 938
BsuRI GGCC 2 cut(s) 5, 579
BsuTUI ATCGAT 1 cut(s) 562
BtsCI GGATG 6 cut(s) 295, 482, 985, 1047, 1314, 1318
Cac8I GCNNGC 3 cut(s) 345, 429, 1553
CaiI CAGNNNCTG 2 cut(s) 143, 340
CciI TCATGA 1 cut(s) 685
Cfr13I GGNCC 2 cut(s) 315, 1310
ClaI ATCGAT 1 cut(s) 562
Csp6I GTAC 5 cut(s) 103, 712, 754, 1280, 1345
CviQI GTAC 5 cut(s) 103, 712, 754, 1280, 1345
DdeI CTNAG 5 cut(s) 210, 715, 813, 1008, 1410
DpnI GATC 6 cut(s) 35, 201, 237, 243, 953, 1491
DpnII GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
DraI TTTAAA 1 cut(s) 1429
EaeI YGGCCR 2 cut(s) 3, 577
Eam1104I CTCTTC 6 cut(s) 354, 401, 493, 645, 899, 1206
EarI CTCTTC 6 cut(s) 354, 401, 493, 645, 899, 1206
Eco31I GGTCTC 2 cut(s) 245, 1233
Eco47I GGWCC 2 cut(s) 315, 1310
Eco91I GGTNACC 1 cut(s) 1012
EcoO65I GGTNACC 1 cut(s) 1012
EcoRI GAATTC 1 cut(s) 776
EcoT22I ATGCAT 2 cut(s) 987, 1096
FaqI GGGAC 3 cut(s) 706, 878, 1296
FauNDI CATATG 3 cut(s) 738, 1110, 1304
FblI GTMKAC 1 cut(s) 1389
Fnu4HI GCNGC 9 cut(s) 26, 335, 338, 341, 730, 970, 973, 1151, 1286
FokI GGATG 6 cut(s) 302, 489, 972, 1034, 1301, 1305
Fsp4HI GCNGC 9 cut(s) 26, 335, 338, 341, 730, 970, 973, 1151, 1286
FspBI CTAG 2 cut(s) 1200, 1445
GluI GCNGC 9 cut(s) 26, 335, 338, 341, 730, 970, 973, 1151, 1286
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 2 cut(s) 5, 579
HapII CCGG 1 cut(s) 484
HindIII AAGCTT 2 cut(s) 532, 797
HinfI GANTC 6 cut(s) 11, 389, 719, 1441, 1457, 1477
HpaII CCGG 1 cut(s) 484
HphI GGTGA 2 cut(s) 1511, 1566
Hpy166II GTNNAC 3 cut(s) 134, 318, 1390
Hpy188I TCNGA 5 cut(s) 592, 766, 1090, 1251, 1411
Hpy188III TCNNGA 3 cut(s) 239, 686, 989
Hpy8I GTNNAC 3 cut(s) 134, 318, 1390
HpyAV CCTTC 7 cut(s) 39, 373, 377, 430, 649, 826, 1459
HpyCH4III ACNGT 3 cut(s) 823, 1031, 1279
HpyCH4IV ACGT 1 cut(s) 891
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 340, 510, 531, 638, 1268
HpyF3I CTNAG 5 cut(s) 210, 715, 813, 1008, 1410
HpySE526I ACGT 1 cut(s) 891
Kzo9I GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
LguI GCTCTTC 3 cut(s) 354, 401, 899
LmnI GCTCC 2 cut(s) 1259, 1399
Lsp1109I GCAGC 9 cut(s) 37, 327, 346, 349, 741, 956, 959, 1137, 1297
LweI GCATC 5 cut(s) 280, 799, 994, 1081, 1103
MaeI CTAG 2 cut(s) 1200, 1445
MaeII ACGT 1 cut(s) 891
MaeIII GTNAC 4 cut(s) 746, 1012, 1070, 1168
MalI GATC 6 cut(s) 35, 201, 237, 243, 953, 1491
MboI GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
MfeI CAATTG 2 cut(s) 231, 1135
MflI RGATCY 1 cut(s) 199
MlsI TGGCCA 2 cut(s) 5, 579
MluNI TGGCCA 2 cut(s) 5, 579
MlyI GAGTC 3 cut(s) 713, 1435, 1466
MmeI TCCRAC 2 cut(s) 159, 1075
Mox20I TGGCCA 2 cut(s) 5, 579
Mph1103I ATGCAT 2 cut(s) 987, 1096
MscI TGGCCA 2 cut(s) 5, 579
MseI TTAA 5 cut(s) 870, 1128, 1428, 1437, 1473
MslI CAYNNNNRTG 3 cut(s) 323, 573, 1102
Msp20I TGGCCA 2 cut(s) 5, 579
MspA1I CMGCKG 1 cut(s) 340
MspI CCGG 1 cut(s) 484
MspR9I CCNGG 1 cut(s) 485
MunI CAATTG 2 cut(s) 231, 1135
Mva1269I GAATGC 3 cut(s) 560, 599, 1545
MwoI GCNNNNNNNGC 6 cut(s) 149, 340, 510, 531, 638, 1268
NciI CCSGG 1 cut(s) 485
NdeI CATATG 3 cut(s) 738, 1110, 1304
NdeII GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
NlaIV GGNNCC 3 cut(s) 316, 482, 1312
NmuCI GTSAC 1 cut(s) 1168
NsiI ATGCAT 2 cut(s) 987, 1096
OliI CACNNNNGTG 1 cut(s) 323
PagI TCATGA 1 cut(s) 685
PciSI GCTCTTC 3 cut(s) 354, 401, 899
PcsI WCGNNNNNNNCGW 1 cut(s) 1489
PctI GAATGC 3 cut(s) 560, 599, 1545
PfeI GAWTC 3 cut(s) 11, 389, 1477
PflMI CCANNNNNTGG 2 cut(s) 143, 450
PkrI GCNGC 9 cut(s) 27, 336, 339, 342, 731, 971, 974, 1152, 1287
PleI GAGTC 3 cut(s) 713, 1435, 1465
PpsI GAGTC 3 cut(s) 713, 1435, 1465
PspEI GGTNACC 1 cut(s) 1012
PspN4I GGNNCC 3 cut(s) 316, 482, 1312
PspPI GGNCC 2 cut(s) 315, 1310
PstI CTGCAG 1 cut(s) 1287
PstNI CAGNNNCTG 2 cut(s) 143, 340
PsuI RGATCY 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 5 cut(s) 104, 713, 755, 1281, 1346
RsaNI GTAC 5 cut(s) 103, 712, 754, 1280, 1345
RseI CAYNNNNRTG 3 cut(s) 323, 573, 1102
SapI GCTCTTC 3 cut(s) 354, 401, 899
SaqAI TTAA 5 cut(s) 870, 1128, 1428, 1437, 1473
SatI GCNGC 9 cut(s) 26, 335, 338, 341, 730, 970, 973, 1151, 1286
Sau3AI GATC 6 cut(s) 33, 199, 235, 241, 951, 1489
Sau96I GGNCC 2 cut(s) 315, 1310
ScaI AGTACT 2 cut(s) 104, 755
SchI GAGTC 3 cut(s) 713, 1435, 1466
ScrFI CCNGG 1 cut(s) 485
SfaNI GCATC 5 cut(s) 280, 799, 994, 1081, 1103
SfcI CTRYAG 1 cut(s) 1283
SinI GGWCC 2 cut(s) 315, 1310
SmiMI CAYNNNNRTG 3 cut(s) 323, 573, 1102
SmlI CTYRAG 3 cut(s) 203, 1141, 1510
SmoI CTYRAG 3 cut(s) 203, 1141, 1510
SsiI CCGC 2 cut(s) 91, 744
SspMI CTAG 2 cut(s) 1200, 1445
StyD4I CCNGG 1 cut(s) 483
TaaI ACNGT 3 cut(s) 823, 1031, 1279
TaiI ACGT 1 cut(s) 894
TaqI TCGA 7 cut(s) 32, 45, 275, 472, 537, 552, 562
TatI WGTACW 2 cut(s) 102, 753
TfiI GAWTC 3 cut(s) 11, 389, 1477
Tru1I TTAA 5 cut(s) 870, 1128, 1428, 1437, 1473
Tru9I TTAA 5 cut(s) 870, 1128, 1428, 1437, 1473
TseFI GTSAC 1 cut(s) 1168
TseI GCWGC 9 cut(s) 25, 334, 337, 340, 729, 969, 972, 1150, 1285
Tsp45I GTSAC 1 cut(s) 1168
TspGWI ACGGA 1 cut(s) 119
Van91I CCANNNNNTGG 2 cut(s) 143, 450
VpaK11BI GGWCC 2 cut(s) 315, 1310
XapI RAATTY 4 cut(s) 16, 457, 666, 776
XmiI GTMKAC 1 cut(s) 1389
XspI CTAG 2 cut(s) 1200, 1445
ZrmI AGTACT 2 cut(s) 104, 755
Zsp2I ATGCAT 2 cut(s) 987, 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.