Rw1G003260

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000154
Physical Location & Seq
Reverse (-)
6013584 .. 6015101
1518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G003260.1

Sequence Viewer

Length: 1197 bp
ATGAGTACCGAGGGTAGCTTTGTGCAACCGGCCATTCCAAAGTTTGATGGCCACTATGATCACTGGGCCATGTTGATGGAGAATCTTCTGCGCTCGAAGGAGTATTGGGGATTGATTGAGAATGGAATCGCAGCAGCAGTGGAAGGGGTTGAGTTGACAGAGGCTCAACGTAAATCTATGGAGGATCAAAGGCTGAAAGACCTCAAAGTGAAGAACTACCTCTTCCAGGCCATTGATCGCACAATCATGGAAACCATCCTTCATAAAGATACAGCCAAGCATATCTGGGATTCCATGAGACAAAAGTATCAAGGCTCAACTAGGGTTAAACGTGCACAACTTCAAGCCCTCAGGAAAGAGTTTGAGGTCTTGCAGATGAAGGAAGGGGAGAAAGTAGACGATTACTTTGCCAGGACTCTCACAATTGCTAACAAGATGAAGATCCACGGAGAAAGAATGGAGCAGGTTGTCATCATTGAGAAAATTTTGAGGTCCATGACCACAAAATTTGACTATGTGGTATCTATGAGGAGAGGGTTGGAGTCAGAGGCAGAGGTCGAGCTGGGACACTATCAATATGAGTGCCCTAGCTGGGAGAAAGGTGCGAACTATGCAGAGCTTGATGAAGAGCAGGAGATGCTACTAATGGCGTATGTAGAGCTACACAATTCAAGGAGAGAAGAAGTTTGGTTCCTCGATTCAGGATGTAGCAATCACATGAGTGGCAACAAACAATGGTTTTTTGATCTTGATGAGTCATTCCGGCATGTAGTGAAGCTTGGCAACAACATGAAAATGGCAGTGATGGGGAGAGGATGCATAAGGCTTCAAATTGATGGGACAACTCAAGTGATTAGGGTGATCATGCAATCTACCATGTCTGCCAATCGCATGTTCATCTTGCTTGCAACGGTACAAACTCAAGCTCCAGCTCCTGCATGCTTTCAGACTACTGCTGAGAATACAACTCAGCTGTGGCATCAAAGATTTGGGCACCTTAGCTACAAAGGGTTGAGAAGCTTGTATTACAAGAAACTGGTGAAGGGTCTACCATCACTCAATGCTCCCACAAAGGTGTGCACAAGCTGCATGATAGGCAAACAGCACCGTGAAGCTATTCCAAAAGAAAAGCCTGTGGAGAACATCCCAAAGATTGCAACTAGTTCATGCAGACCTCTGTGGCCCAATTACACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve zf-CCHC

Protein Analysis

398

Amino Acids

46.11

Weight (kDa)

8.65

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 26 - 175 2.8e-19 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 230 - 285 1.5e-15 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 309 - 368 8.7e-15 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 454
AccB1I GGYRCC 1 cut(s) 993
AccI GTMKAC 2 cut(s) 396, 1048
AclWI GGATC 2 cut(s) 192, 436
AcoI YGGCCR 2 cut(s) 30, 49
AcsI RAATTY 2 cut(s) 483, 506
AfaI GTAC 2 cut(s) 7, 915
AfiI CCNNNNNNNGG 2 cut(s) 226, 592
AgsI TTSAA 3 cut(s) 344, 672, 830
AhlI ACTAGT 1 cut(s) 1160
AjnI CCWGG 2 cut(s) 225, 410
AjuI GAANNNNNNNTTGG 2 cut(s) 878, 910
AleI CACNNNNGTG 2 cut(s) 720, 1073
Alw21I GWGCWC 2 cut(s) 337, 1082
Alw26I GTCTC 1 cut(s) 292
Alw44I GTGCAC 2 cut(s) 333, 1078
AlwI GGATC 2 cut(s) 192, 436
AlwNI CAGNNNCTG 1 cut(s) 935
AoxI GGCC 5 cut(s) 30, 49, 66, 228, 1181
ApaLI GTGCAC 2 cut(s) 333, 1078
ApeKI GCWGC 3 cut(s) 131, 134, 1086
ApoI RAATTY 2 cut(s) 483, 506
ArsI GACNNNNNNTTYG 2 cut(s) 389, 421
Asp700I GAANNNNTTC 1 cut(s) 1116
AspLEI GCGC 1 cut(s) 93
AspS9I GGNCC 3 cut(s) 66, 492, 1182
AsuHPI GGTGA 2 cut(s) 871, 1051
AvaII GGWCC 1 cut(s) 492
AxyI CCTNAGG 1 cut(s) 350
BaeGI GKGCMC 4 cut(s) 337, 587, 996, 1082
BaeI ACNNNNGTAYC 2 cut(s) 290, 323
BalI TGGCCA 1 cut(s) 51
BanI GGYRCC 1 cut(s) 993
Bbv12I GWGCWC 2 cut(s) 337, 1082
BbvI GCAGC 3 cut(s) 143, 146, 1073
BccI CCATC 6 cut(s) 41, 70, 263, 799, 830, 1060
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 2 cut(s) 227, 412
BclI TGATCA 2 cut(s) 58, 861
BcoDI GTCTC 1 cut(s) 292
BcuI ACTAGT 1 cut(s) 1160
BfaI CTAG 3 cut(s) 321, 588, 1161
BfuAI ACCTGC 1 cut(s) 454
BisI GCNGC 3 cut(s) 132, 135, 1087
BlsI GCNGC 3 cut(s) 133, 136, 1088
Bme1390I CCNGG 2 cut(s) 227, 412
Bme18I GGWCC 1 cut(s) 492
BmgT120I GGNCC 3 cut(s) 66, 492, 1182
BmiI GGNNCC 2 cut(s) 692, 995
BmrFI CCNGG 2 cut(s) 227, 412
BmrI ACTGGG 1 cut(s) 73
BmsI GCATC 3 cut(s) 627, 806, 988
BmuI ACTGGG 1 cut(s) 73
BpmI CTGGAG 1 cut(s) 912
Bpu10I CCTNAGC 1 cut(s) 998
BpuEI CTTGAG 2 cut(s) 831, 906
BsaBI GATNNNNATC 1 cut(s) 440
BsaJI CCNNGG 2 cut(s) 9, 445
BsaXI ACNNNNNCTCC 2 cut(s) 910, 940
Bsc4I CCNNNNNNNGG 2 cut(s) 226, 592
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 2 cut(s) 68, 1041
Bse21I CCTNAGG 1 cut(s) 350
Bse8I GATNNNNATC 1 cut(s) 440
BseBI CCWGG 2 cut(s) 227, 412
BseDI CCNNGG 2 cut(s) 9, 445
BseGI GGATG 4 cut(s) 255, 710, 821, 1143
BseJI GATNNNNATC 1 cut(s) 440
BseLI CCNNNNNNNGG 2 cut(s) 226, 592
BseMII CTCAG 3 cut(s) 364, 948, 983
BseNI ACTGG 2 cut(s) 68, 1041
BseRI GAGGAG 1 cut(s) 544
BseSI GKGCMC 4 cut(s) 337, 587, 996, 1082
BseXI GCAGC 3 cut(s) 143, 146, 1073
BseYI CCCAGC 2 cut(s) 562, 591
BshFI GGCC 5 cut(s) 32, 51, 68, 230, 1183
BshNI GGYRCC 1 cut(s) 993
BsiHKAI GWGCWC 2 cut(s) 337, 1082
BsiSI CCGG 2 cut(s) 29, 763
BslFI GGGAC 2 cut(s) 579, 853
BslI CCNNNNNNNGG 2 cut(s) 226, 592
BsmAI GTCTC 1 cut(s) 292
BsmFI GGGAC 2 cut(s) 579, 853
BsnI GGCC 5 cut(s) 32, 51, 68, 230, 1183
Bsp1286I GDGCHC 4 cut(s) 337, 587, 996, 1082
Bsp143I GATC 6 cut(s) 58, 184, 235, 441, 745, 861
BspANI GGCC 5 cut(s) 32, 51, 68, 230, 1183
BspCNI CTCAG 3 cut(s) 363, 949, 982
BspLI GGNNCC 2 cut(s) 692, 995
BspMI ACCTGC 1 cut(s) 454
BspPI GGATC 2 cut(s) 192, 436
BspQI GCTCTTC 1 cut(s) 621
BspT107I GGYRCC 1 cut(s) 993
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 2 cut(s) 68, 1041
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 2 cut(s) 9, 445
BssMI GATC 6 cut(s) 58, 184, 235, 441, 745, 861
Bst2UI CCWGG 2 cut(s) 227, 412
Bst4CI ACNGT 2 cut(s) 913, 1109
Bst6I CTCTTC 2 cut(s) 227, 621
BstAPI GCANNNNNTGC 2 cut(s) 637, 1086
BstC8I GCNNGC 2 cut(s) 906, 940
BstDEI CTNAG 4 cut(s) 350, 957, 969, 998
BstDSI CCRYGG 1 cut(s) 445
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 4 cut(s) 255, 710, 821, 1143
BstHHI GCGC 1 cut(s) 93
BstKTI GATC 6 cut(s) 61, 187, 238, 444, 748, 864
BstMAI GTCTC 1 cut(s) 292
BstMBI GATC 6 cut(s) 58, 184, 235, 441, 745, 861
BstMWI GCNNNNNNNGC 4 cut(s) 611, 637, 1086, 1095
BstNI CCWGG 2 cut(s) 227, 412
BstNSI RCATGY 3 cut(s) 770, 895, 942
BstSCI CCNGG 2 cut(s) 225, 410
BstSLI GKGCMC 4 cut(s) 337, 587, 996, 1082
BstV1I GCAGC 3 cut(s) 143, 146, 1073
BstX2I RGATCY 1 cut(s) 441
BstXI CCANNNNNNTGG 1 cut(s) 76
BstYI RGATCY 1 cut(s) 441
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 5 cut(s) 32, 51, 68, 230, 1183
BtgI CCRYGG 1 cut(s) 445
BtsCI GGATG 4 cut(s) 255, 710, 821, 1143
BtsI GCAGTG 2 cut(s) 144, 807
BtsIMutI CAGTG 3 cut(s) 61, 144, 807
BveI ACCTGC 1 cut(s) 454
Cac8I GCNNGC 2 cut(s) 906, 940
CaiI CAGNNNCTG 1 cut(s) 935
CfoI GCGC 1 cut(s) 93
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 3 cut(s) 66, 492, 1182
Csp6I GTAC 2 cut(s) 6, 914
CspCI CAANNNNNGTGG 2 cut(s) 490, 525
CviQI GTAC 2 cut(s) 6, 914
DdeI CTNAG 4 cut(s) 350, 957, 969, 998
DpnI GATC 6 cut(s) 60, 186, 237, 443, 747, 863
DpnII GATC 6 cut(s) 58, 184, 235, 441, 745, 861
EaeI YGGCCR 2 cut(s) 30, 49
Eam1104I CTCTTC 2 cut(s) 227, 621
EarI CTCTTC 2 cut(s) 227, 621
Eco47I GGWCC 1 cut(s) 492
Eco81I CCTNAGG 1 cut(s) 350
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoRII CCWGG 2 cut(s) 225, 410
EcoT22I ATGCAT 1 cut(s) 821
FaqI GGGAC 2 cut(s) 579, 853
FbaI TGATCA 2 cut(s) 58, 861
FblI GTMKAC 2 cut(s) 396, 1048
Fnu4HI GCNGC 3 cut(s) 132, 135, 1087
FokI GGATG 4 cut(s) 242, 717, 828, 1130
Fsp4HI GCNGC 3 cut(s) 132, 135, 1087
FspBI CTAG 3 cut(s) 321, 588, 1161
GlaI GCGC 1 cut(s) 92
GluI GCNGC 3 cut(s) 132, 135, 1087
GsaI CCCAGC 2 cut(s) 566, 595
GsuI CTGGAG 1 cut(s) 912
HaeIII GGCC 5 cut(s) 32, 51, 68, 230, 1183
HapII CCGG 2 cut(s) 29, 763
HhaI GCGC 1 cut(s) 93
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HincII GTYRAC 1 cut(s) 156
HindII GTYRAC 1 cut(s) 156
HindIII AAGCTT 2 cut(s) 776, 1018
HinfI GANTC 7 cut(s) 82, 126, 290, 415, 542, 698, 755
HpaII CCGG 2 cut(s) 29, 763
HphI GGTGA 2 cut(s) 871, 1051
Hpy166II GTNNAC 5 cut(s) 156, 335, 397, 1049, 1080
Hpy188I TCNGA 2 cut(s) 547, 948
Hpy188III TCNNGA 3 cut(s) 352, 702, 749
Hpy8I GTNNAC 5 cut(s) 156, 335, 397, 1049, 1080
HpyAV CCTTC 6 cut(s) 91, 137, 269, 373, 377, 1036
HpyCH4III ACNGT 2 cut(s) 913, 1109
HpyCH4IV ACGT 2 cut(s) 169, 331
HpyF10VI GCNNNNNNNGC 4 cut(s) 611, 637, 1086, 1095
HpyF3I CTNAG 4 cut(s) 350, 957, 969, 998
HpySE526I ACGT 2 cut(s) 169, 331
HspAI GCGC 1 cut(s) 91
Ksp22I TGATCA 2 cut(s) 58, 861
Kzo9I GATC 6 cut(s) 58, 184, 235, 441, 745, 861
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 4 cut(s) 460, 931, 937, 1069
Lsp1109I GCAGC 3 cut(s) 143, 146, 1073
LweI GCATC 3 cut(s) 627, 806, 988
MaeI CTAG 3 cut(s) 321, 588, 1161
MaeII ACGT 2 cut(s) 169, 331
MalI GATC 6 cut(s) 60, 186, 237, 443, 747, 863
MboI GATC 6 cut(s) 58, 184, 235, 441, 745, 861
MboII GAAGA 6 cut(s) 77, 214, 223, 451, 638, 692
MfeI CAATTG 1 cut(s) 423
MflI RGATCY 1 cut(s) 441
MhlI GDGCHC 4 cut(s) 337, 587, 996, 1082
MlsI TGGCCA 1 cut(s) 51
MluCI AATT 6 cut(s) 423, 483, 506, 667, 831, 1186
MluNI TGGCCA 1 cut(s) 51
MlyI GAGTC 3 cut(s) 409, 551, 764
MmeI TCCRAC 1 cut(s) 519
Mox20I TGGCCA 1 cut(s) 51
Mph1103I ATGCAT 1 cut(s) 821
MroXI GAANNNNTTC 1 cut(s) 1116
MscI TGGCCA 1 cut(s) 51
MseI TTAA 1 cut(s) 327
MslI CAYNNNNRTG 5 cut(s) 74, 245, 720, 794, 1073
Msp20I TGGCCA 1 cut(s) 51
MspA1I CMGCKG 1 cut(s) 973
MspI CCGG 2 cut(s) 29, 763
MspR9I CCNGG 2 cut(s) 227, 412
MunI CAATTG 1 cut(s) 423
MvaI CCWGG 2 cut(s) 227, 412
MwoI GCNNNNNNNGC 4 cut(s) 611, 637, 1086, 1095
NdeII GATC 6 cut(s) 58, 184, 235, 441, 745, 861
NlaIV GGNNCC 2 cut(s) 692, 995
NsiI ATGCAT 1 cut(s) 821
NspI RCATGY 3 cut(s) 770, 895, 942
OliI CACNNNNGTG 2 cut(s) 720, 1073
PaeI GCATGC 1 cut(s) 942
PciSI GCTCTTC 1 cut(s) 621
PdmI GAANNNNTTC 1 cut(s) 1116
PfeI GAWTC 4 cut(s) 82, 126, 290, 698
PkrI GCNGC 3 cut(s) 133, 136, 1088
PleI GAGTC 3 cut(s) 409, 550, 763
PpsI GAGTC 3 cut(s) 409, 550, 763
Psp6I CCWGG 2 cut(s) 225, 410
PspFI CCCAGC 2 cut(s) 562, 591
PspGI CCWGG 2 cut(s) 225, 410
PspN4I GGNNCC 2 cut(s) 692, 995
PspPI GGNCC 3 cut(s) 66, 492, 1182
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 441
PvuII CAGCTG 1 cut(s) 973
RsaI GTAC 2 cut(s) 7, 915
RsaNI GTAC 2 cut(s) 6, 914
RseI CAYNNNNRTG 5 cut(s) 74, 245, 720, 794, 1073
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 1 cut(s) 327
SatI GCNGC 3 cut(s) 132, 135, 1087
Sau3AI GATC 6 cut(s) 58, 184, 235, 441, 745, 861
Sau96I GGNCC 3 cut(s) 66, 492, 1182
SchI GAGTC 3 cut(s) 409, 551, 764
ScrFI CCNGG 2 cut(s) 227, 412
SduI GDGCHC 4 cut(s) 337, 587, 996, 1082
SfaNI GCATC 3 cut(s) 627, 806, 988
SinI GGWCC 1 cut(s) 492
SmiMI CAYNNNNRTG 5 cut(s) 74, 245, 720, 794, 1073
SmlI CTYRAG 2 cut(s) 846, 921
SmoI CTYRAG 2 cut(s) 846, 921
SpeI ACTAGT 1 cut(s) 1160
SphI GCATGC 1 cut(s) 942
Sse9I AATT 6 cut(s) 423, 483, 506, 667, 831, 1186
SspMI CTAG 3 cut(s) 321, 588, 1161
StyD4I CCNGG 2 cut(s) 225, 410
TaaI ACNGT 2 cut(s) 913, 1109
TaiI ACGT 2 cut(s) 172, 334
TaqI TCGA 3 cut(s) 95, 558, 696
TasI AATT 6 cut(s) 423, 483, 506, 667, 831, 1186
TfiI GAWTC 4 cut(s) 82, 126, 290, 698
Tru1I TTAA 1 cut(s) 327
Tru9I TTAA 1 cut(s) 327
TscAI CASTG 3 cut(s) 68, 144, 807
TseI GCWGC 3 cut(s) 131, 134, 1086
TspDTI ATGAA 7 cut(s) 251, 392, 452, 639, 806, 886, 1155
TspGWI ACGGA 1 cut(s) 462
TspRI CASTG 3 cut(s) 68, 144, 807
VneI GTGCAC 2 cut(s) 333, 1078
VpaK11BI GGWCC 1 cut(s) 492
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 2 cut(s) 483, 506
XceI RCATGY 3 cut(s) 770, 895, 942
XmiI GTMKAC 2 cut(s) 396, 1048
XmnI GAANNNNTTC 1 cut(s) 1116
XspI CTAG 3 cut(s) 321, 588, 1161
Zsp2I ATGCAT 1 cut(s) 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.