Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 28 - 207 | 1.6e-30 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 352 - 431 | 4.9e-22 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 462 - 528 | 1.7e-16 | GAG-pre-integrase domain |
| rve | PF00665 | 542 - 643 | 2.1e-10 | Integrase core domain |
| SH3_retrovirus | PF25597 | 717 - 781 | 6.8e-26 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 878 - 1122 | 3.9e-85 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2662 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 182 |
| Acc36I | ACCTGC | 3 cut(s) | 1163, 1421, 2662 |
| AccB1I | GGYRCC | 1 cut(s) | 3010 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2126 |
| AccI | GTMKAC | 4 cut(s) | 1062, 1445, 2973, 3155 |
| AciI | CCGC | 2 cut(s) | 67, 1685 |
| AclWI | GGATC | 6 cut(s) | 16, 264, 2155, 2255, 2464, 3652 |
| AcoI | YGGCCR | 1 cut(s) | 2128 |
| AcsI | RAATTY | 8 cut(s) | 676, 785, 1784, 1853, 1868, 2344, 2371, 2561 |
| AcuI | CTGAAG | 3 cut(s) | 1478, 2454, 3795 |
| AdeI | CACNNNGTG | 2 cut(s) | 561, 4142 |
| AfaI | GTAC | 8 cut(s) | 345, 835, 944, 1356, 1422, 1723, 2034, 2048 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 2126, 2137, 2325 |
| AflII | CTTAAG | 1 cut(s) | 3073 |
| AflIII | ACRYGT | 2 cut(s) | 2234, 3174 |
| AhlI | ACTAGT | 1 cut(s) | 2746 |
| AjnI | CCWGG | 5 cut(s) | 1240, 2119, 2318, 2773, 3020 |
| AleI | CACNNNNGTG | 1 cut(s) | 2042 |
| Alw21I | GWGCWC | 1 cut(s) | 3552 |
| Alw26I | GTCTC | 9 cut(s) | 256, 481, 563, 1459, 1532, 2786, 3133, 3355, 4153 |
| AlwI | GGATC | 6 cut(s) | 16, 264, 2155, 2255, 2464, 3652 |
| AoxI | GGCC | 6 cut(s) | 1471, 1917, 2128, 3229, 3711, 3789 |
| ApeKI | GCWGC | 8 cut(s) | 200, 1498, 2448, 2573, 2846, 3404, 3482, 3955 |
| ApoI | RAATTY | 8 cut(s) | 676, 785, 1784, 1853, 1868, 2344, 2371, 2561 |
| AseI | ATTAAT | 2 cut(s) | 447, 4166 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 656 |
| AspS9I | GGNCC | 4 cut(s) | 1334, 1661, 3229, 3711 |
| AsuC2I | CCSGG | 1 cut(s) | 2804 |
| AsuII | TTCGAA | 1 cut(s) | 2565 |
| AvaII | GGWCC | 2 cut(s) | 1334, 1661 |
| AxyI | CCTNAGG | 2 cut(s) | 2937, 3670 |
| BaeGI | GKGCMC | 1 cut(s) | 3569 |
| BalI | TGGCCA | 1 cut(s) | 2130 |
| BanI | GGYRCC | 1 cut(s) | 3010 |
| BbsI | GAAGAC | 4 cut(s) | 1124, 1484, 3660, 3914 |
| Bbv12I | GWGCWC | 1 cut(s) | 3552 |
| BbvI | GCAGC | 8 cut(s) | 187, 1510, 2460, 2560, 2833, 3416, 3494, 3967 |
| BccI | CCATC | 8 cut(s) | 70, 292, 1270, 1325, 1482, 2179, 2711, 3386 |
| BceAI | ACGGC | 1 cut(s) | 446 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2555, 2589 |
| BciT130I | CCWGG | 5 cut(s) | 1242, 2121, 2320, 2775, 3022 |
| BciVI | GTATCC | 1 cut(s) | 2240 |
| BclI | TGATCA | 3 cut(s) | 337, 1411, 2485 |
| BcnI | CCSGG | 1 cut(s) | 2804 |
| BcoDI | GTCTC | 9 cut(s) | 256, 481, 563, 1459, 1532, 2786, 3133, 3355, 4153 |
| BcuI | ACTAGT | 1 cut(s) | 2746 |
| BfmI | CTRYAG | 3 cut(s) | 573, 3747, 3851 |
| BfrI | CTTAAG | 1 cut(s) | 3073 |
| BfuAI | ACCTGC | 3 cut(s) | 1163, 1421, 2662 |
| BfuI | GTATCC | 1 cut(s) | 2240 |
| BglII | AGATCT | 1 cut(s) | 261 |
| BisI | GCNGC | 8 cut(s) | 201, 1499, 2449, 2574, 2847, 3405, 3483, 3956 |
| BlsI | GCNGC | 8 cut(s) | 202, 1500, 2450, 2575, 2848, 3406, 3484, 3957 |
| Bme1390I | CCNGG | 6 cut(s) | 1242, 2121, 2320, 2775, 2804, 3022 |
| Bme18I | GGWCC | 2 cut(s) | 1334, 1661 |
| BmgT120I | GGNCC | 4 cut(s) | 1334, 1661, 3229, 3711 |
| BmiI | GGNNCC | 3 cut(s) | 1004, 2553, 3012 |
| BmrFI | CCNGG | 6 cut(s) | 1242, 2121, 2320, 2775, 2804, 3022 |
| BmrI | ACTGGG | 4 cut(s) | 657, 940, 1526, 3646 |
| BmsI | GCATC | 8 cut(s) | 169, 208, 1753, 1879, 2185, 3288, 3829, 3937 |
| BmuI | ACTGGG | 4 cut(s) | 657, 940, 1526, 3646 |
| BpiI | GAAGAC | 4 cut(s) | 1124, 1484, 3660, 3914 |
| BpmI | CTGGAG | 2 cut(s) | 2392, 2478 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1980, 3786 |
| Bpu14I | TTCGAA | 1 cut(s) | 2565 |
| BpuMI | CCSGG | 1 cut(s) | 2804 |
| BsaI | GGTCTC | 1 cut(s) | 1532 |
| BsaJI | CCNNGG | 6 cut(s) | 1241, 1794, 2120, 2754, 2802, 4017 |
| BsaWI | WCCGGW | 1 cut(s) | 3466 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1609, 1639, 2390, 2420 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 2126, 2137, 2325 |
| Bse1I | ACTGG | 8 cut(s) | 652, 935, 1532, 1644, 2409, 2495, 3163, 3641 |
| Bse21I | CCTNAGG | 2 cut(s) | 2937, 3670 |
| Bse3DI | GCAATG | 2 cut(s) | 1992, 2607 |
| BseBI | CCWGG | 5 cut(s) | 1242, 2121, 2320, 2775, 3022 |
| BseDI | CCNNGG | 6 cut(s) | 1241, 1794, 2120, 2754, 2802, 4017 |
| BseGI | GGATG | 7 cut(s) | 223, 399, 1285, 1555, 3148, 3187, 3952 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 2126, 2137, 2325 |
| BseMI | GCAATG | 2 cut(s) | 1992, 2607 |
| BseNI | ACTGG | 8 cut(s) | 652, 935, 1532, 1644, 2409, 2495, 3163, 3641 |
| BseRI | GAGGAG | 2 cut(s) | 1849, 2413 |
| BseSI | GKGCMC | 1 cut(s) | 3569 |
| BseXI | GCAGC | 8 cut(s) | 187, 1510, 2460, 2560, 2833, 3416, 3494, 3967 |
| BsgI | GTGCAG | 8 cut(s) | 515, 786, 868, 1339, 2559, 2786, 2832, 3423 |
| BshFI | GGCC | 6 cut(s) | 1473, 1919, 2130, 3231, 3713, 3791 |
| BshNI | GGYRCC | 1 cut(s) | 3010 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3552 |
| BsiSI | CCGG | 2 cut(s) | 2804, 3467 |
| BslFI | GGGAC | 1 cut(s) | 4067 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 2126, 2137, 2325 |
| BsmAI | GTCTC | 9 cut(s) | 256, 481, 563, 1459, 1532, 2786, 3133, 3355, 4153 |
| BsmFI | GGGAC | 1 cut(s) | 4067 |
| BsmI | GAATGC | 2 cut(s) | 656, 2451 |
| BsnI | GGCC | 6 cut(s) | 1473, 1919, 2130, 3231, 3713, 3791 |
| Bso31I | GGTCTC | 1 cut(s) | 1532 |
| Bsp119I | TTCGAA | 1 cut(s) | 2565 |
| Bsp1286I | GDGCHC | 2 cut(s) | 3552, 3569 |
| Bsp1407I | TGTACA | 2 cut(s) | 1721, 2046 |
| Bsp19I | CCATGG | 1 cut(s) | 1794 |
| BspACI | CCGC | 2 cut(s) | 67, 1685 |
| BspANI | GGCC | 6 cut(s) | 1473, 1919, 2130, 3231, 3713, 3791 |
| BspHI | TCATGA | 3 cut(s) | 210, 1161, 1993 |
| BspLI | GGNNCC | 3 cut(s) | 1004, 2553, 3012 |
| BspMAI | CTGCAG | 2 cut(s) | 3751, 3855 |
| BspMI | ACCTGC | 3 cut(s) | 1163, 1421, 2662 |
| BspPI | GGATC | 6 cut(s) | 16, 264, 2155, 2255, 2464, 3652 |
| BspT104I | TTCGAA | 1 cut(s) | 2565 |
| BspT107I | GGYRCC | 1 cut(s) | 3010 |
| BspTI | CTTAAG | 1 cut(s) | 3073 |
| BspTNI | GGTCTC | 1 cut(s) | 1532 |
| BsrDI | GCAATG | 2 cut(s) | 1992, 2607 |
| BsrGI | TGTACA | 2 cut(s) | 1721, 2046 |
| BsrI | ACTGG | 8 cut(s) | 652, 935, 1532, 1644, 2409, 2495, 3163, 3641 |
| BssECI | CCNNGG | 6 cut(s) | 1241, 1794, 2120, 2754, 2802, 4017 |
| BssNAI | GTATAC | 1 cut(s) | 3156 |
| BssT1I | CCWWGG | 3 cut(s) | 1794, 2754, 4017 |
| Bst1107I | GTATAC | 1 cut(s) | 3156 |
| Bst2UI | CCWGG | 5 cut(s) | 1242, 2121, 2320, 2775, 3022 |
| Bst6I | CTCTTC | 3 cut(s) | 599, 3313, 3408 |
| BstAFI | CTTAAG | 1 cut(s) | 3073 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 809, 977 |
| BstAUI | TGTACA | 2 cut(s) | 1721, 2046 |
| BstBI | TTCGAA | 1 cut(s) | 2565 |
| BstC8I | GCNNGC | 2 cut(s) | 1687, 2006 |
| BstDSI | CCRYGG | 1 cut(s) | 1794 |
| BstF5I | GGATG | 7 cut(s) | 223, 399, 1285, 1555, 3148, 3187, 3952 |
| BstMAI | GTCTC | 9 cut(s) | 256, 481, 563, 1459, 1532, 2786, 3133, 3355, 4153 |
| BstNI | CCWGG | 5 cut(s) | 1242, 2121, 2320, 2775, 3022 |
| BstNSI | RCATGY | 5 cut(s) | 1484, 1649, 2008, 2238, 3178 |
| BstSCI | CCNGG | 6 cut(s) | 1240, 2119, 2318, 2773, 2802, 3020 |
| BstSFI | CTRYAG | 3 cut(s) | 573, 3747, 3851 |
| BstSLI | GKGCMC | 1 cut(s) | 3569 |
| BstV1I | GCAGC | 8 cut(s) | 187, 1510, 2460, 2560, 2833, 3416, 3494, 3967 |
| BstV2I | GAAGAC | 4 cut(s) | 1124, 1484, 3660, 3914 |
| BstX2I | RGATCY | 4 cut(s) | 8, 261, 2469, 3644 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2502, 3139 |
| BstYI | RGATCY | 4 cut(s) | 8, 261, 2469, 3644 |
| BstZ17I | GTATAC | 1 cut(s) | 3156 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2937, 3670 |
| BsuI | GTATCC | 1 cut(s) | 2240 |
| BsuRI | GGCC | 6 cut(s) | 1473, 1919, 2130, 3231, 3713, 3791 |
| BtgI | CCRYGG | 1 cut(s) | 1794 |
| BtsCI | GGATG | 7 cut(s) | 223, 399, 1285, 1555, 3148, 3187, 3952 |
| BtsI | GCAGTG | 2 cut(s) | 3403, 3860 |
| BveI | ACCTGC | 3 cut(s) | 1163, 1421, 2662 |
| Cac8I | GCNNGC | 2 cut(s) | 1687, 2006 |
| CciI | TCATGA | 3 cut(s) | 210, 1161, 1993 |
| Cfr13I | GGNCC | 4 cut(s) | 1334, 1661, 3229, 3711 |
| Csp6I | GTAC | 8 cut(s) | 344, 834, 943, 1355, 1421, 1722, 2033, 2047 |
| CviQI | GTAC | 8 cut(s) | 344, 834, 943, 1355, 1421, 1722, 2033, 2047 |
| DraI | TTTAAA | 1 cut(s) | 2136 |
| DraIII | CACNNNGTG | 2 cut(s) | 561, 4142 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 182 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 182 |
| EaeI | YGGCCR | 1 cut(s) | 2128 |
| Eam1104I | CTCTTC | 3 cut(s) | 599, 3313, 3408 |
| EarI | CTCTTC | 3 cut(s) | 599, 3313, 3408 |
| EciI | GGCGGA | 1 cut(s) | 82 |
| Eco130I | CCWWGG | 3 cut(s) | 1794, 2754, 4017 |
| Eco31I | GGTCTC | 1 cut(s) | 1532 |
| Eco32I | GATATC | 1 cut(s) | 3932 |
| Eco47I | GGWCC | 2 cut(s) | 1334, 1661 |
| Eco57I | CTGAAG | 3 cut(s) | 1478, 2454, 3795 |
| Eco81I | CCTNAGG | 2 cut(s) | 2937, 3670 |
| EcoRI | GAATTC | 5 cut(s) | 676, 1853, 1868, 2344, 2371 |
| EcoRII | CCWGG | 5 cut(s) | 1240, 2119, 2318, 2773, 3020 |
| EcoRV | GATATC | 1 cut(s) | 3932 |
| EcoT14I | CCWWGG | 3 cut(s) | 1794, 2754, 4017 |
| EcoT22I | ATGCAT | 3 cut(s) | 1768, 3510, 3682 |
| ErhI | CCWWGG | 3 cut(s) | 1794, 2754, 4017 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 854, 886, 2696, 2728, 3596, 3628, 3935, 3967 |
| FaqI | GGGAC | 1 cut(s) | 4067 |
| FauI | CCCGC | 1 cut(s) | 1678 |
| FauNDI | CATATG | 2 cut(s) | 1083, 3794 |
| FbaI | TGATCA | 3 cut(s) | 337, 1411, 2485 |
| FblI | GTMKAC | 4 cut(s) | 1062, 1445, 2973, 3155 |
| Fnu4HI | GCNGC | 8 cut(s) | 201, 1499, 2449, 2574, 2847, 3405, 3483, 3956 |
| FokI | GGATG | 7 cut(s) | 230, 406, 1292, 1562, 3155, 3194, 3959 |
| Fsp4HI | GCNGC | 8 cut(s) | 201, 1499, 2449, 2574, 2847, 3405, 3483, 3956 |
| GluI | GCNGC | 8 cut(s) | 201, 1499, 2449, 2574, 2847, 3405, 3483, 3956 |
| GsuI | CTGGAG | 2 cut(s) | 2392, 2478 |
| HaeIII | GGCC | 6 cut(s) | 1473, 1919, 2130, 3231, 3713, 3791 |
| HapII | CCGG | 2 cut(s) | 2804, 3467 |
| HincII | GTYRAC | 1 cut(s) | 2653 |
| HindII | GTYRAC | 1 cut(s) | 2653 |
| HindIII | AAGCTT | 2 cut(s) | 3070, 3428 |
| HpaI | GTTAAC | 1 cut(s) | 2653 |
| HpaII | CCGG | 2 cut(s) | 2804, 3467 |
| HpyCH4IV | ACGT | 1 cut(s) | 4138 |
| HpySE526I | ACGT | 1 cut(s) | 4138 |
| Ksp22I | TGATCA | 3 cut(s) | 337, 1411, 2485 |
| KspAI | GTTAAC | 1 cut(s) | 2653 |
| LmnI | GCTCC | 1 cut(s) | 2644 |
| Lsp1109I | GCAGC | 8 cut(s) | 187, 1510, 2460, 2560, 2833, 3416, 3494, 3967 |
| LweI | GCATC | 8 cut(s) | 169, 208, 1753, 1879, 2185, 3288, 3829, 3937 |
| MaeII | ACGT | 1 cut(s) | 4138 |
| MflI | RGATCY | 4 cut(s) | 8, 261, 2469, 3644 |
| MhlI | GDGCHC | 2 cut(s) | 3552, 3569 |
| MlsI | TGGCCA | 1 cut(s) | 2130 |
| MluNI | TGGCCA | 1 cut(s) | 2130 |
| MlyI | GAGTC | 3 cut(s) | 134, 416, 616 |
| MmeI | TCCRAC | 3 cut(s) | 2203, 3159, 3297 |
| Mox20I | TGGCCA | 1 cut(s) | 2130 |
| Mph1103I | ATGCAT | 3 cut(s) | 1768, 3510, 3682 |
| MroXI | GAANNNNTTC | 1 cut(s) | 656 |
| MscI | TGGCCA | 1 cut(s) | 2130 |
| MslI | CAYNNNNRTG | 6 cut(s) | 333, 1166, 1479, 1771, 2042, 3137 |
| Msp20I | TGGCCA | 1 cut(s) | 2130 |
| MspA1I | CMGCKG | 1 cut(s) | 2042 |
| MspCI | CTTAAG | 1 cut(s) | 3073 |
| MspI | CCGG | 2 cut(s) | 2804, 3467 |
| MspR9I | CCNGG | 6 cut(s) | 1242, 2121, 2320, 2775, 2804, 3022 |
| Mva1269I | GAATGC | 2 cut(s) | 656, 2451 |
| MvaI | CCWGG | 5 cut(s) | 1242, 2121, 2320, 2775, 3022 |
| NciI | CCSGG | 1 cut(s) | 2804 |
| NcoI | CCATGG | 1 cut(s) | 1794 |
| NdeI | CATATG | 2 cut(s) | 1083, 3794 |
| NlaIV | GGNNCC | 3 cut(s) | 1004, 2553, 3012 |
| NmeAIII | GCCGAG | 1 cut(s) | 3781 |
| NmuCI | GTSAC | 6 cut(s) | 926, 994, 1811, 1838, 2356, 3632 |
| NsiI | ATGCAT | 3 cut(s) | 1768, 3510, 3682 |
| NspI | RCATGY | 5 cut(s) | 1484, 1649, 2008, 2238, 3178 |
| NspV | TTCGAA | 1 cut(s) | 2565 |
| OliI | CACNNNNGTG | 1 cut(s) | 2042 |
| PaeI | GCATGC | 1 cut(s) | 2008 |
| PagI | TCATGA | 3 cut(s) | 210, 1161, 1993 |
| PaqCI | CACCTGC | 1 cut(s) | 2662 |
| PciI | ACATGT | 2 cut(s) | 2234, 3174 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 183, 282 |
| PctI | GAATGC | 2 cut(s) | 656, 2451 |
| PdmI | GAANNNNTTC | 1 cut(s) | 656 |
| PflFI | GACNNNGTC | 1 cut(s) | 2969 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2126 |
| PkrI | GCNGC | 8 cut(s) | 202, 1500, 2450, 2575, 2848, 3406, 3484, 3957 |
| PleI | GAGTC | 3 cut(s) | 134, 415, 615 |
| PpsI | GAGTC | 3 cut(s) | 134, 415, 615 |
| PscI | ACATGT | 2 cut(s) | 2234, 3174 |
| PshBI | ATTAAT | 2 cut(s) | 447, 4166 |
| Psp6I | CCWGG | 5 cut(s) | 1240, 2119, 2318, 2773, 3020 |
| PspGI | CCWGG | 5 cut(s) | 1240, 2119, 2318, 2773, 3020 |
| PspN4I | GGNNCC | 3 cut(s) | 1004, 2553, 3012 |
| PspPI | GGNCC | 4 cut(s) | 1334, 1661, 3229, 3711 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1370, 1402 |
| PstI | CTGCAG | 2 cut(s) | 3751, 3855 |
| PsuI | RGATCY | 4 cut(s) | 8, 261, 2469, 3644 |
| PsyI | GACNNNGTC | 1 cut(s) | 2969 |
| PvuII | CAGCTG | 1 cut(s) | 2042 |
| RsaI | GTAC | 8 cut(s) | 345, 835, 944, 1356, 1422, 1723, 2034, 2048 |
| RsaNI | GTAC | 8 cut(s) | 344, 834, 943, 1355, 1421, 1722, 2033, 2047 |
| RseI | CAYNNNNRTG | 6 cut(s) | 333, 1166, 1479, 1771, 2042, 3137 |
| SatI | GCNGC | 8 cut(s) | 201, 1499, 2449, 2574, 2847, 3405, 3483, 3956 |
| Sau96I | GGNCC | 4 cut(s) | 1334, 1661, 3229, 3711 |
| SchI | GAGTC | 3 cut(s) | 134, 416, 616 |
| ScrFI | CCNGG | 6 cut(s) | 1242, 2121, 2320, 2775, 2804, 3022 |
| SduI | GDGCHC | 2 cut(s) | 3552, 3569 |
| SfaNI | GCATC | 8 cut(s) | 169, 208, 1753, 1879, 2185, 3288, 3829, 3937 |
| SfcI | CTRYAG | 3 cut(s) | 573, 3747, 3851 |
| SfuI | TTCGAA | 1 cut(s) | 2565 |
| SinI | GGWCC | 2 cut(s) | 1334, 1661 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 333, 1166, 1479, 1771, 2042, 3137 |
| SmlI | CTYRAG | 1 cut(s) | 3073 |
| SmoI | CTYRAG | 1 cut(s) | 3073 |
| SpeI | ACTAGT | 1 cut(s) | 2746 |
| SphI | GCATGC | 1 cut(s) | 2008 |
| SsiI | CCGC | 2 cut(s) | 67, 1685 |
| SspI | AATATT | 1 cut(s) | 1697 |
| StyD4I | CCNGG | 6 cut(s) | 1240, 2119, 2318, 2773, 2802, 3020 |
| StyI | CCWWGG | 3 cut(s) | 1794, 2754, 4017 |
| TaiI | ACGT | 1 cut(s) | 4141 |
| TaqI | TCGA | 5 cut(s) | 143, 186, 479, 2565, 3499 |
| TatI | WGTACW | 6 cut(s) | 942, 1354, 1420, 1721, 2032, 2046 |
| TseFI | GTSAC | 6 cut(s) | 926, 994, 1811, 1838, 2356, 3632 |
| TseI | GCWGC | 8 cut(s) | 200, 1498, 2448, 2573, 2846, 3404, 3482, 3955 |
| Tsp45I | GTSAC | 6 cut(s) | 926, 994, 1811, 1838, 2356, 3632 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2969 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2126 |
| Vha464I | CTTAAG | 1 cut(s) | 3073 |
| VpaK11BI | GGWCC | 2 cut(s) | 1334, 1661 |
| VspI | ATTAAT | 2 cut(s) | 447, 4166 |
| XapI | RAATTY | 8 cut(s) | 676, 785, 1784, 1853, 1868, 2344, 2371, 2561 |
| XbaI | TCTAGA | 2 cut(s) | 565, 1633 |
| XceI | RCATGY | 5 cut(s) | 1484, 1649, 2008, 2238, 3178 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2016, 3997 |
| XmiI | GTMKAC | 4 cut(s) | 1062, 1445, 2973, 3155 |
| XmnI | GAANNNNTTC | 1 cut(s) | 656 |
| Zsp2I | ATGCAT | 3 cut(s) | 1768, 3510, 3682 |