Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 32 - 150 | 3.4e-29 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1075 |
| Acc36I | ACCTGC | 1 cut(s) | 1075 |
| AccI | GTMKAC | 1 cut(s) | 830 |
| AciI | CCGC | 2 cut(s) | 192, 728 |
| AclWI | GGATC | 1 cut(s) | 750 |
| AcsI | RAATTY | 1 cut(s) | 845 |
| AcuI | CTGAAG | 1 cut(s) | 414 |
| AfaI | GTAC | 1 cut(s) | 641 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 121, 663, 1042 |
| AflII | CTTAAG | 1 cut(s) | 1027 |
| AgsI | TTSAA | 7 cut(s) | 149, 460, 508, 646, 901, 1058, 1114 |
| AjiI | CACGTC | 1 cut(s) | 756 |
| AluBI | AGCT | 8 cut(s) | 104, 279, 620, 700, 780, 857, 967, 1163 |
| AluI | AGCT | 8 cut(s) | 104, 279, 620, 700, 780, 857, 967, 1163 |
| Alw21I | GWGCWC | 2 cut(s) | 281, 782 |
| Alw26I | GTCTC | 3 cut(s) | 99, 491, 1026 |
| AlwI | GGATC | 1 cut(s) | 750 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 860 |
| ApeKI | GCWGC | 6 cut(s) | 189, 620, 700, 854, 857, 860 |
| ApoI | RAATTY | 1 cut(s) | 845 |
| AseI | ATTAAT | 1 cut(s) | 135 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 144, 1062, 1125 |
| AsuC2I | CCSGG | 1 cut(s) | 760 |
| AsuHPI | GGTGA | 4 cut(s) | 37, 169, 257, 1061 |
| BaeGI | GKGCMC | 1 cut(s) | 653 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 623, 656 |
| BanII | GRGCYC | 2 cut(s) | 281, 782 |
| BauI | CACGAG | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 2 cut(s) | 281, 782 |
| BbvI | GCAGC | 6 cut(s) | 201, 607, 687, 844, 847, 866 |
| BccI | CCATC | 2 cut(s) | 256, 1141 |
| BceAI | ACGGC | 1 cut(s) | 99 |
| BciVI | GTATCC | 1 cut(s) | 624 |
| BcnI | CCSGG | 1 cut(s) | 760 |
| BcoDI | GTCTC | 3 cut(s) | 99, 491, 1026 |
| BfmI | CTRYAG | 1 cut(s) | 1164 |
| BfrI | CTTAAG | 1 cut(s) | 1027 |
| BfuAI | ACCTGC | 1 cut(s) | 1075 |
| BfuI | GTATCC | 1 cut(s) | 624 |
| BisI | GCNGC | 6 cut(s) | 190, 621, 701, 855, 858, 861 |
| BlsI | GCNGC | 6 cut(s) | 191, 622, 702, 856, 859, 862 |
| Bme1390I | CCNGG | 1 cut(s) | 760 |
| BmgBI | CACGTC | 1 cut(s) | 756 |
| BmrFI | CCNGG | 1 cut(s) | 760 |
| BmsI | GCATC | 1 cut(s) | 405 |
| Bpu10I | CCTNAGC | 1 cut(s) | 781 |
| BpuEI | CTTGAG | 1 cut(s) | 440 |
| BpuMI | CCSGG | 1 cut(s) | 760 |
| BsaI | GGTCTC | 2 cut(s) | 99, 1026 |
| BsaJI | CCNNGG | 2 cut(s) | 331, 837 |
| BsaWI | WCCGGW | 1 cut(s) | 979 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 186, 216 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 121, 663, 1042 |
| Bse1I | ACTGG | 1 cut(s) | 247 |
| BseDI | CCNNGG | 2 cut(s) | 331, 837 |
| BseGI | GGATG | 5 cut(s) | 45, 232, 324, 420, 891 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 121, 663, 1042 |
| BseMII | CTCAG | 3 cut(s) | 45, 795, 1150 |
| BseNI | ACTGG | 1 cut(s) | 247 |
| BseRI | GAGGAG | 1 cut(s) | 1009 |
| BseSI | GKGCMC | 1 cut(s) | 653 |
| BseXI | GCAGC | 6 cut(s) | 201, 607, 687, 844, 847, 866 |
| BsiHKAI | GWGCWC | 2 cut(s) | 281, 782 |
| BsiSI | CCGG | 2 cut(s) | 759, 980 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 121, 663, 1042 |
| BsmAI | GTCTC | 3 cut(s) | 99, 491, 1026 |
| Bso31I | GGTCTC | 2 cut(s) | 99, 1026 |
| Bsp1286I | GDGCHC | 3 cut(s) | 281, 653, 782 |
| Bsp143I | GATC | 1 cut(s) | 742 |
| BspACI | CCGC | 2 cut(s) | 192, 728 |
| BspCNI | CTCAG | 3 cut(s) | 44, 794, 1149 |
| BspMI | ACCTGC | 1 cut(s) | 1075 |
| BspPI | GGATC | 1 cut(s) | 750 |
| BspQI | GCTCTTC | 1 cut(s) | 690 |
| BspTI | CTTAAG | 1 cut(s) | 1027 |
| BspTNI | GGTCTC | 2 cut(s) | 99, 1026 |
| BsrI | ACTGG | 1 cut(s) | 247 |
| BssECI | CCNNGG | 2 cut(s) | 331, 837 |
| BssMI | GATC | 1 cut(s) | 742 |
| BssSI | CACGAG | 1 cut(s) | 99 |
| BssT1I | CCWWGG | 1 cut(s) | 331 |
| Bst2BI | CACGAG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 1 cut(s) | 490 |
| Bst6I | CTCTTC | 3 cut(s) | 249, 690, 896 |
| BstAFI | CTTAAG | 1 cut(s) | 1027 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 860 |
| BstC8I | GCNNGC | 1 cut(s) | 705 |
| BstDEI | CTNAG | 5 cut(s) | 31, 635, 781, 908, 1136 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1040 |
| BstF5I | GGATG | 5 cut(s) | 45, 232, 324, 420, 891 |
| BstKTI | GATC | 1 cut(s) | 745 |
| BstMAI | GTCTC | 3 cut(s) | 99, 491, 1026 |
| BstMBI | GATC | 1 cut(s) | 742 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 860, 866 |
| BstSCI | CCNGG | 1 cut(s) | 758 |
| BstSFI | CTRYAG | 1 cut(s) | 1164 |
| BstSLI | GKGCMC | 1 cut(s) | 653 |
| BstV1I | GCAGC | 6 cut(s) | 201, 607, 687, 844, 847, 866 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 105 |
| BsuI | GTATCC | 1 cut(s) | 624 |
| BtrI | CACGTC | 1 cut(s) | 756 |
| BtsCI | GGATG | 5 cut(s) | 45, 232, 324, 420, 891 |
| BtsI | GCAGTG | 1 cut(s) | 651 |
| BtsIMutI | CAGTG | 4 cut(s) | 39, 240, 571, 651 |
| BveI | ACCTGC | 1 cut(s) | 1075 |
| Cac8I | GCNNGC | 1 cut(s) | 705 |
| CaiI | CAGNNNCTG | 1 cut(s) | 860 |
| Csp6I | GTAC | 1 cut(s) | 640 |
| CviAII | CATG | 7 cut(s) | 22, 301, 589, 795, 914, 985, 989 |
| CviQI | GTAC | 1 cut(s) | 640 |
| DdeI | CTNAG | 5 cut(s) | 31, 635, 781, 908, 1136 |
| DpnI | GATC | 1 cut(s) | 744 |
| DpnII | GATC | 1 cut(s) | 742 |
| Eam1104I | CTCTTC | 3 cut(s) | 249, 690, 896 |
| EarI | CTCTTC | 3 cut(s) | 249, 690, 896 |
| Ecl136II | GAGCTC | 2 cut(s) | 279, 780 |
| Eco130I | CCWWGG | 1 cut(s) | 331 |
| Eco24I | GRGCYC | 2 cut(s) | 281, 782 |
| Eco31I | GGTCTC | 2 cut(s) | 99, 1026 |
| Eco53kI | GAGCTC | 2 cut(s) | 279, 780 |
| Eco57I | CTGAAG | 1 cut(s) | 414 |
| EcoICRI | GAGCTC | 2 cut(s) | 279, 780 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1040 |
| EcoT14I | CCWWGG | 1 cut(s) | 331 |
| EcoT22I | ATGCAT | 1 cut(s) | 990 |
| EcoT38I | GRGCYC | 2 cut(s) | 281, 782 |
| ErhI | CCWWGG | 1 cut(s) | 331 |
| FaeI | CATG | 7 cut(s) | 25, 304, 592, 798, 917, 988, 992 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 687, 719 |
| FatI | CATG | 7 cut(s) | 21, 300, 588, 794, 913, 984, 988 |
| FauI | CCCGC | 1 cut(s) | 721 |
| FblI | GTMKAC | 1 cut(s) | 830 |
| Fnu4HI | GCNGC | 6 cut(s) | 190, 621, 701, 855, 858, 861 |
| FokI | GGATG | 5 cut(s) | 52, 239, 331, 427, 898 |
| FriOI | GRGCYC | 2 cut(s) | 281, 782 |
| Fsp4HI | GCNGC | 6 cut(s) | 190, 621, 701, 855, 858, 861 |
| GluI | GCNGC | 6 cut(s) | 190, 621, 701, 855, 858, 861 |
| HapII | CCGG | 2 cut(s) | 759, 980 |
| Hin1II | CATG | 7 cut(s) | 25, 304, 592, 798, 917, 988, 992 |
| HinfI | GANTC | 3 cut(s) | 169, 667, 976 |
| HpaII | CCGG | 2 cut(s) | 759, 980 |
| HphI | GGTGA | 4 cut(s) | 37, 169, 257, 1061 |
| Hpy166II | GTNNAC | 3 cut(s) | 28, 831, 1174 |
| Hpy188I | TCNGA | 4 cut(s) | 394, 444, 1131, 1139 |
| Hpy188III | TCNNGA | 3 cut(s) | 460, 551, 783 |
| Hpy8I | GTNNAC | 3 cut(s) | 28, 831, 1174 |
| HpyAV | CCTTC | 7 cut(s) | 69, 134, 309, 640, 673, 885, 917 |
| HpyCH4III | ACNGT | 1 cut(s) | 490 |
| HpyCH4IV | ACGT | 2 cut(s) | 406, 755 |
| HpyCH4V | TGCA | 4 cut(s) | 542, 917, 930, 988 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 860, 866 |
| HpyF3I | CTNAG | 5 cut(s) | 31, 635, 781, 908, 1136 |
| HpySE526I | ACGT | 2 cut(s) | 406, 755 |
| Hsp92II | CATG | 7 cut(s) | 25, 304, 592, 798, 917, 988, 992 |
| Kzo9I | GATC | 1 cut(s) | 742 |
| LguI | GCTCTTC | 1 cut(s) | 690 |
| LmnI | GCTCC | 2 cut(s) | 186, 785 |
| LpnPI | CCDG | 8 cut(s) | 228, 564, 568, 768, 772, 905, 993, 1070 |
| Lsp1109I | GCAGC | 6 cut(s) | 201, 607, 687, 844, 847, 866 |
| LweI | GCATC | 1 cut(s) | 405 |
| MaeII | ACGT | 2 cut(s) | 406, 755 |
| MaeIII | GTNAC | 4 cut(s) | 345, 484, 820, 944 |
| MalI | GATC | 1 cut(s) | 744 |
| MboI | GATC | 1 cut(s) | 742 |
| MboII | GAAGA | 5 cut(s) | 10, 266, 319, 707, 913 |
| MhlI | GDGCHC | 3 cut(s) | 281, 653, 782 |
| MluCI | AATT | 5 cut(s) | 234, 427, 845, 960, 1058 |
| MlyI | GAGTC | 1 cut(s) | 163 |
| Mph1103I | ATGCAT | 1 cut(s) | 990 |
| MroXI | GAANNNNTTC | 3 cut(s) | 144, 1062, 1125 |
| MseI | TTAA | 7 cut(s) | 135, 233, 273, 401, 527, 963, 1028 |
| MslI | CAYNNNNRTG | 3 cut(s) | 341, 1008, 1010 |
| MspA1I | CMGCKG | 2 cut(s) | 192, 857 |
| MspCI | CTTAAG | 1 cut(s) | 1027 |
| MspI | CCGG | 2 cut(s) | 759, 980 |
| MspR9I | CCNGG | 1 cut(s) | 760 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 860, 866 |
| NciI | CCSGG | 1 cut(s) | 760 |
| NdeII | GATC | 1 cut(s) | 742 |
| NlaIII | CATG | 7 cut(s) | 25, 304, 592, 798, 917, 988, 992 |
| NmuCI | GTSAC | 3 cut(s) | 484, 820, 944 |
| NsiI | ATGCAT | 1 cut(s) | 990 |
| PaqCI | CACCTGC | 1 cut(s) | 1075 |
| PciSI | GCTCTTC | 1 cut(s) | 690 |
| PdmI | GAANNNNTTC | 3 cut(s) | 144, 1062, 1125 |
| PfeI | GAWTC | 2 cut(s) | 667, 976 |
| PkrI | GCNGC | 6 cut(s) | 191, 622, 702, 856, 859, 862 |
| PleI | GAGTC | 1 cut(s) | 163 |
| PpsI | GAGTC | 1 cut(s) | 163 |
| PshBI | ATTAAT | 1 cut(s) | 135 |
| Psp124BI | GAGCTC | 2 cut(s) | 281, 782 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 597, 629 |
| PstNI | CAGNNNCTG | 1 cut(s) | 860 |
| PvuII | CAGCTG | 1 cut(s) | 857 |
| RsaI | GTAC | 1 cut(s) | 641 |
| RsaNI | GTAC | 1 cut(s) | 640 |
| RseI | CAYNNNNRTG | 3 cut(s) | 341, 1008, 1010 |
| SacI | GAGCTC | 2 cut(s) | 281, 782 |
| SapI | GCTCTTC | 1 cut(s) | 690 |
| SaqAI | TTAA | 7 cut(s) | 135, 233, 273, 401, 527, 963, 1028 |
| SatI | GCNGC | 6 cut(s) | 190, 621, 701, 855, 858, 861 |
| Sau3AI | GATC | 1 cut(s) | 742 |
| SchI | GAGTC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 1 cut(s) | 760 |
| SduI | GDGCHC | 3 cut(s) | 281, 653, 782 |
| SfaNI | GCATC | 1 cut(s) | 405 |
| SfcI | CTRYAG | 1 cut(s) | 1164 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 341, 1008, 1010 |
| SmlI | CTYRAG | 2 cut(s) | 419, 1027 |
| SmoI | CTYRAG | 2 cut(s) | 419, 1027 |
| Sse9I | AATT | 5 cut(s) | 234, 427, 845, 960, 1058 |
| SsiI | CCGC | 2 cut(s) | 192, 728 |
| SstI | GAGCTC | 2 cut(s) | 281, 782 |
| StyD4I | CCNGG | 1 cut(s) | 758 |
| StyI | CCWWGG | 1 cut(s) | 331 |
| TaaI | ACNGT | 1 cut(s) | 490 |
| TaiI | ACGT | 2 cut(s) | 409, 758 |
| TaqII | GACCGA | 1 cut(s) | 320 |
| TasI | AATT | 5 cut(s) | 234, 427, 845, 960, 1058 |
| TfiI | GAWTC | 2 cut(s) | 667, 976 |
| Tru1I | TTAA | 7 cut(s) | 135, 233, 273, 401, 527, 963, 1028 |
| Tru9I | TTAA | 7 cut(s) | 135, 233, 273, 401, 527, 963, 1028 |
| TscAI | CASTG | 4 cut(s) | 39, 247, 571, 658 |
| TseFI | GTSAC | 3 cut(s) | 484, 820, 944 |
| TseI | GCWGC | 6 cut(s) | 189, 620, 700, 854, 857, 860 |
| Tsp45I | GTSAC | 3 cut(s) | 484, 820, 944 |
| TspGWI | ACGGA | 1 cut(s) | 988 |
| TspRI | CASTG | 4 cut(s) | 39, 247, 571, 658 |
| Vha464I | CTTAAG | 1 cut(s) | 1027 |
| VspI | ATTAAT | 1 cut(s) | 135 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1040 |
| XapI | RAATTY | 1 cut(s) | 845 |
| XmiI | GTMKAC | 1 cut(s) | 830 |
| XmnI | GAANNNNTTC | 3 cut(s) | 144, 1062, 1125 |
| Zsp2I | ATGCAT | 1 cut(s) | 990 |