Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 45, 475 |
| AcsI | RAATTY | 1 cut(s) | 310 |
| AfaI | GTAC | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 334 |
| AflIII | ACRYGT | 3 cut(s) | 394, 511, 589 |
| AgsI | TTSAA | 4 cut(s) | 71, 101, 115, 272 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 18 |
| AleI | CACNNNNGTG | 2 cut(s) | 462, 590 |
| AluBI | AGCT | 5 cut(s) | 254, 259, 520, 622, 652 |
| AluI | AGCT | 5 cut(s) | 254, 259, 520, 622, 652 |
| Alw21I | GWGCWC | 2 cut(s) | 256, 349 |
| Alw26I | GTCTC | 1 cut(s) | 182 |
| Alw44I | GTGCAC | 1 cut(s) | 345 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApaLI | GTGCAC | 1 cut(s) | 345 |
| ApeKI | GCWGC | 1 cut(s) | 259 |
| ApoI | RAATTY | 1 cut(s) | 310 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 174 |
| AsuHPI | GGTGA | 3 cut(s) | 139, 256, 383 |
| BaeGI | GKGCMC | 1 cut(s) | 349 |
| BanII | GRGCYC | 1 cut(s) | 256 |
| BbsI | GAAGAC | 1 cut(s) | 108 |
| Bbv12I | GWGCWC | 2 cut(s) | 256, 349 |
| BbvI | GCAGC | 1 cut(s) | 246 |
| BccI | CCATC | 3 cut(s) | 56, 382, 541 |
| BclI | TGATCA | 1 cut(s) | 594 |
| BcoDI | GTCTC | 1 cut(s) | 182 |
| BfmI | CTRYAG | 1 cut(s) | 260 |
| BisI | GCNGC | 1 cut(s) | 260 |
| BlpI | GCTNAGC | 2 cut(s) | 255, 638 |
| BlsI | GCNGC | 1 cut(s) | 261 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 651 |
| BpiI | GAAGAC | 1 cut(s) | 108 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 255, 638 |
| BsaBI | GATNNNNATC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 1 cut(s) | 229 |
| BsaWI | WCCGGW | 1 cut(s) | 616 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 269, 299 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 334 |
| Bse8I | GATNNNNATC | 1 cut(s) | 179 |
| BseDI | CCNNGG | 1 cut(s) | 229 |
| BseGI | GGATG | 1 cut(s) | 499 |
| BseJI | GATNNNNATC | 1 cut(s) | 179 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 334 |
| BseMII | CTCAG | 2 cut(s) | 269, 456 |
| BseSI | GKGCMC | 1 cut(s) | 349 |
| BseXI | GCAGC | 1 cut(s) | 246 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 2 cut(s) | 256, 349 |
| BsiSI | CCGG | 1 cut(s) | 617 |
| BslFI | GGGAC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 334 |
| BsmAI | GTCTC | 1 cut(s) | 182 |
| BsmFI | GGGAC | 1 cut(s) | 221 |
| BsmI | GAATGC | 1 cut(s) | 329 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 2 cut(s) | 256, 349 |
| Bsp143I | GATC | 1 cut(s) | 594 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 255, 638 |
| BspACI | CCGC | 2 cut(s) | 45, 475 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspCNI | CTCAG | 2 cut(s) | 268, 455 |
| BspMAI | CTGCAG | 1 cut(s) | 264 |
| BssECI | CCNNGG | 1 cut(s) | 229 |
| BssMI | GATC | 1 cut(s) | 594 |
| BssT1I | CCWWGG | 1 cut(s) | 229 |
| Bst6I | CTCTTC | 2 cut(s) | 242, 369 |
| BstC8I | GCNNGC | 1 cut(s) | 264 |
| BstDEI | CTNAG | 3 cut(s) | 255, 442, 638 |
| BstF5I | GGATG | 1 cut(s) | 499 |
| BstKTI | GATC | 1 cut(s) | 597 |
| BstMAI | GTCTC | 1 cut(s) | 182 |
| BstMBI | GATC | 1 cut(s) | 594 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 294 |
| BstNSI | RCATGY | 3 cut(s) | 398, 515, 593 |
| BstSFI | CTRYAG | 1 cut(s) | 260 |
| BstSLI | GKGCMC | 1 cut(s) | 349 |
| BstV1I | GCAGC | 1 cut(s) | 246 |
| BstV2I | GAAGAC | 1 cut(s) | 108 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtsCI | GGATG | 1 cut(s) | 499 |
| BtsIMutI | CAGTG | 1 cut(s) | 597 |
| Cac8I | GCNNGC | 1 cut(s) | 264 |
| CseI | GACGC | 1 cut(s) | 113 |
| Csp6I | GTAC | 1 cut(s) | 226 |
| CviAII | CATG | 4 cut(s) | 395, 460, 512, 590 |
| CviJI | RGCY | 8 cut(s) | 95, 149, 194, 254, 259, 520, 622, 652 |
| CviKI_1 | RGCY | 8 cut(s) | 95, 149, 194, 254, 259, 520, 622, 652 |
| CviQI | GTAC | 1 cut(s) | 226 |
| DdeI | CTNAG | 3 cut(s) | 255, 442, 638 |
| DpnI | GATC | 1 cut(s) | 596 |
| DpnII | GATC | 1 cut(s) | 594 |
| DriI | GACNNNNNGTC | 1 cut(s) | 18 |
| Eam1104I | CTCTTC | 2 cut(s) | 242, 369 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 18 |
| EarI | CTCTTC | 2 cut(s) | 242, 369 |
| Ecl136II | GAGCTC | 1 cut(s) | 254 |
| Eco130I | CCWWGG | 1 cut(s) | 229 |
| Eco24I | GRGCYC | 1 cut(s) | 256 |
| Eco53kI | GAGCTC | 1 cut(s) | 254 |
| EcoICRI | GAGCTC | 1 cut(s) | 254 |
| EcoT14I | CCWWGG | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 256 |
| ErhI | CCWWGG | 1 cut(s) | 229 |
| FaeI | CATG | 4 cut(s) | 398, 463, 515, 593 |
| FaqI | GGGAC | 1 cut(s) | 221 |
| FatI | CATG | 4 cut(s) | 394, 459, 511, 589 |
| FbaI | TGATCA | 1 cut(s) | 594 |
| Fnu4HI | GCNGC | 1 cut(s) | 260 |
| FokI | GGATG | 1 cut(s) | 506 |
| FriOI | GRGCYC | 1 cut(s) | 256 |
| Fsp4HI | GCNGC | 1 cut(s) | 260 |
| GluI | GCNGC | 1 cut(s) | 260 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HapII | CCGG | 1 cut(s) | 617 |
| HgaI | GACGC | 1 cut(s) | 113 |
| Hin1II | CATG | 4 cut(s) | 398, 463, 515, 593 |
| HindIII | AAGCTT | 1 cut(s) | 518 |
| HinfI | GANTC | 4 cut(s) | 175, 209, 440, 582 |
| HpaII | CCGG | 1 cut(s) | 617 |
| HphI | GGTGA | 3 cut(s) | 139, 256, 383 |
| Hpy166II | GTNNAC | 1 cut(s) | 347 |
| Hpy188III | TCNNGA | 1 cut(s) | 672 |
| Hpy8I | GTNNAC | 1 cut(s) | 347 |
| HpyAV | CCTTC | 1 cut(s) | 547 |
| HpyCH4V | TGCA | 3 cut(s) | 262, 347, 667 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 294 |
| HpyF3I | CTNAG | 3 cut(s) | 255, 442, 638 |
| Hsp92II | CATG | 4 cut(s) | 398, 463, 515, 593 |
| Ksp22I | TGATCA | 1 cut(s) | 594 |
| Kzo9I | GATC | 1 cut(s) | 594 |
| LmnI | GCTCC | 1 cut(s) | 619 |
| LpnPI | CCDG | 4 cut(s) | 248, 342, 429, 630 |
| Lsp1109I | GCAGC | 1 cut(s) | 246 |
| LweI | GCATC | 1 cut(s) | 651 |
| MaeIII | GTNAC | 2 cut(s) | 467, 524 |
| MalI | GATC | 1 cut(s) | 596 |
| MboI | GATC | 1 cut(s) | 594 |
| MboII | GAAGA | 3 cut(s) | 113, 259, 386 |
| MhlI | GDGCHC | 2 cut(s) | 256, 349 |
| MluCI | AATT | 5 cut(s) | 133, 162, 302, 310, 631 |
| MlyI | GAGTC | 2 cut(s) | 203, 434 |
| MnlI | CCTC | 4 cut(s) | 73, 210, 361, 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 174 |
| MseI | TTAA | 1 cut(s) | 405 |
| MslI | CAYNNNNRTG | 4 cut(s) | 462, 488, 576, 590 |
| MspA1I | CMGCKG | 1 cut(s) | 259 |
| MspI | CCGG | 1 cut(s) | 617 |
| Mva1269I | GAATGC | 1 cut(s) | 329 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 294 |
| NdeII | GATC | 1 cut(s) | 594 |
| NlaIII | CATG | 4 cut(s) | 398, 463, 515, 593 |
| NspI | RCATGY | 3 cut(s) | 398, 515, 593 |
| OliI | CACNNNNGTG | 2 cut(s) | 462, 590 |
| PciI | ACATGT | 3 cut(s) | 394, 511, 589 |
| PctI | GAATGC | 1 cut(s) | 329 |
| PdmI | GAANNNNTTC | 1 cut(s) | 174 |
| PfeI | GAWTC | 2 cut(s) | 175, 582 |
| PkrI | GCNGC | 1 cut(s) | 261 |
| PleI | GAGTC | 2 cut(s) | 203, 434 |
| PpsI | GAGTC | 2 cut(s) | 203, 434 |
| PscI | ACATGT | 3 cut(s) | 394, 511, 589 |
| Psp124BI | GAGCTC | 1 cut(s) | 256 |
| PstI | CTGCAG | 1 cut(s) | 264 |
| PvuII | CAGCTG | 1 cut(s) | 259 |
| RsaI | GTAC | 1 cut(s) | 227 |
| RsaNI | GTAC | 1 cut(s) | 226 |
| RseI | CAYNNNNRTG | 4 cut(s) | 462, 488, 576, 590 |
| SacI | GAGCTC | 1 cut(s) | 256 |
| SaqAI | TTAA | 1 cut(s) | 405 |
| SatI | GCNGC | 1 cut(s) | 260 |
| Sau3AI | GATC | 1 cut(s) | 594 |
| SchI | GAGTC | 2 cut(s) | 203, 434 |
| SduI | GDGCHC | 2 cut(s) | 256, 349 |
| SfaNI | GCATC | 1 cut(s) | 651 |
| SfcI | CTRYAG | 1 cut(s) | 260 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 462, 488, 576, 590 |
| Sse9I | AATT | 5 cut(s) | 133, 162, 302, 310, 631 |
| SsiI | CCGC | 2 cut(s) | 45, 475 |
| SstI | GAGCTC | 1 cut(s) | 256 |
| StyI | CCWWGG | 1 cut(s) | 229 |
| TaqI | TCGA | 1 cut(s) | 505 |
| TaqII | GACCGA | 1 cut(s) | 635 |
| TasI | AATT | 5 cut(s) | 133, 162, 302, 310, 631 |
| TfiI | GAWTC | 2 cut(s) | 175, 582 |
| Tru1I | TTAA | 1 cut(s) | 405 |
| Tru9I | TTAA | 1 cut(s) | 405 |
| TscAI | CASTG | 1 cut(s) | 604 |
| TseI | GCWGC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 1 cut(s) | 472 |
| TspRI | CASTG | 1 cut(s) | 604 |
| VneI | GTGCAC | 1 cut(s) | 345 |
| XapI | RAATTY | 1 cut(s) | 310 |
| XceI | RCATGY | 3 cut(s) | 398, 515, 593 |
| XmnI | GAANNNNTTC | 1 cut(s) | 174 |