Rw2G025650

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000154
Physical Location & Seq
Forward (+)
38610363 .. 38611966
1604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G025650.1

Sequence Viewer

Length: 1296 bp
ATGGCAGAAAGCAGTGGTAGTGGTTTTGTGCAGCCGGCTATCCCCAAATTTGACGGTCACTATGACCATTGGGCGATGCTGATGGAGAATTTTCTCCGTTCTAAGGAGTATTGGGGCCTTGTTGAGAATGGGATCTTATCAGTGGCAGCAGGGACAGAGCTGACAGAGACACAACAGAAATTGATTGAGGAGCAAAAGTTGAAGGATTTAAAGGTAAAAAATTACCTTTTCCAAGCAATTGAGAGAGATATCTTGGAGACAATCTTCAACAGGGACACAGCCAAACATATCTGGGATTCGATGAAGCAAAAATTCCAGGGTTCAACCAGGGTTAAGAGGGCACAGCTGCAAGCTTTACGCAGAGATTTCGAGATTCTCCACATGAAGGAAGGAGAGACAGTGAATGCCTATTTTGCTCGTACTCTAACCATAGCCAACAAAATGAAGGCTCATGGTGACAGTATGCGTGAAAATGTCATTACTGAGAAGATTTTGAGATCAATGGTCTCAAAATTCGATTATGTGGTATGCTCGATTGAGGAATCGAATAACCTGGAAACAATGAGTATTGACGAGCTACAAAGCAGCCTTCTCTATGAGTGTCCTGATTGGGAGAAAAAGGTCAACTACGCTGAGTTAGACGAAGAAGAAGAGCTTTTGCTAATGTCCTATGTTGAGCTCCATCAGGCTAAGAGGGAAGAAGTGTGGTTTCTTGACTCCGGTTGCAGCAACCATATGAGTGGGAATAGGGAGTGGTTCTCAGAATTAGATGAAGGTTTCCGACAGACTGTGAAGCTCGGCAATGATACCAGAATGGCTGTTGTGGGAAAAGGAAGTCTTCAAGAAAAAGGCCTAGCCATTTTGATTCAACATGGAACTTGCAAGGTATATCATCCTAGGAGAGGATTAATTATGCAGACTAATATGAGTGGGAATAAAATGTTTTTCTTGTTGGCTGCTATGGTACCGAAAATTTCTGCATGTTTTCAATCTATGTCAGAAAATGAGTCTCACCTTTGGCATTGTCGATTTGGTCACTTGAGCTACAAGGGATTGAGAACACTCTCGTATAAGAAGATGGTGGATGGGTTGCCTTCTCTTAAGACTCCGAAGAAGCTATGTACAGAGTGTTTGATTGAAAAGCCTTTGGAGAGCAGCACACAAGCTCCAGCTCGGCACGCAGACATATGCGAACCTATCACACCAGCTTCAAACAGCAATAAGAGGTACATCTTAAGTTTTATCGACGATTTCACTCGTAAAACTTGGATTTACTTCTTGCATGAGAAATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve zf-CCHC

Protein Analysis

431

Amino Acids

49.75

Weight (kDa)

6.56

Isoelectric Point (pI)

56.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 29 - 200 2.1e-25 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 236 - 281 5.4e-15 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 321 - 381 7.2e-14 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 964
AccB1I GGYRCC 1 cut(s) 964
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 5 cut(s) 47, 88, 311, 512, 972
AfaI GTAC 4 cut(s) 421, 966, 1123, 1229
AfiI CCNNNNNNNGG 3 cut(s) 103, 385, 902
AflII CTTAAG 2 cut(s) 1100, 1234
AgsI TTSAA 8 cut(s) 202, 268, 324, 842, 869, 989, 1139, 1212
AjnI CCWGG 3 cut(s) 315, 326, 552
Alw21I GWGCWC 1 cut(s) 681
Alw26I GTCTC 5 cut(s) 161, 251, 389, 511, 1014
AlwI GGATC 1 cut(s) 140
AoxI GGCC 2 cut(s) 115, 850
ApeKI GCWGC 7 cut(s) 31, 146, 346, 585, 726, 956, 1155
ApoI RAATTY 5 cut(s) 47, 88, 311, 512, 972
AseI ATTAAT 1 cut(s) 908
Asp718I GGTACC 1 cut(s) 964
AspA2I CCTAGG 1 cut(s) 896
AspS9I GGNCC 1 cut(s) 115
AsuHPI GGTGA 2 cut(s) 467, 1004
AvrII CCTAGG 1 cut(s) 896
BaeGI GKGCMC 1 cut(s) 343
BanI GGYRCC 1 cut(s) 964
BanII GRGCYC 1 cut(s) 681
BbsI GAAGAC 1 cut(s) 830
Bbv12I GWGCWC 1 cut(s) 681
BbvI GCAGC 7 cut(s) 43, 158, 333, 597, 738, 943, 1167
BccI CCATC 4 cut(s) 76, 690, 1072, 1079
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BciT130I CCWGG 3 cut(s) 317, 328, 554
BcoDI GTCTC 5 cut(s) 161, 251, 389, 511, 1014
BfaI CTAG 2 cut(s) 854, 897
BfrI CTTAAG 2 cut(s) 1100, 1234
BisI GCNGC 7 cut(s) 32, 147, 347, 586, 727, 957, 1156
BlnI CCTAGG 1 cut(s) 896
BlsI GCNGC 7 cut(s) 33, 148, 348, 587, 728, 958, 1157
Bme1390I CCNGG 3 cut(s) 317, 328, 554
BmgT120I GGNCC 1 cut(s) 115
BmiI GGNNCC 2 cut(s) 116, 966
BmrFI CCNGG 3 cut(s) 317, 328, 554
BmsI GCATC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 830
BplI GAGNNNNNCTC 2 cut(s) 743, 775
BpmI CTGGAG 1 cut(s) 1152
BpuEI CTTGAG 1 cut(s) 1060
BsaI GGTCTC 1 cut(s) 511
BsaJI CCNNGG 3 cut(s) 316, 327, 896
BsaWI WCCGGW 1 cut(s) 719
BsaXI ACNNNNNCTCC 6 cut(s) 182, 212, 384, 414, 1150, 1180
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 385, 902
Bse118I RCCGGY 1 cut(s) 34
Bse3DI GCAATG 1 cut(s) 808
BseBI CCWGG 3 cut(s) 317, 328, 554
BseDI CCNNGG 3 cut(s) 316, 327, 896
BseGI GGATG 2 cut(s) 892, 1090
BseLI CCNNNNNNNGG 3 cut(s) 103, 385, 902
BseMI GCAATG 1 cut(s) 808
BseMII CTCAG 3 cut(s) 474, 624, 774
BseRI GAGGAG 1 cut(s) 203
BseSI GKGCMC 1 cut(s) 343
BseXI GCAGC 7 cut(s) 43, 158, 333, 597, 738, 943, 1167
BsgI GTGCAG 1 cut(s) 50
BshFI GGCC 2 cut(s) 117, 852
BshNI GGYRCC 1 cut(s) 964
BsiHKAI GWGCWC 1 cut(s) 681
BsiSI CCGG 2 cut(s) 35, 720
BslFI GGGAC 2 cut(s) 166, 287
BslI CCNNNNNNNGG 3 cut(s) 103, 385, 902
BsmAI GTCTC 5 cut(s) 161, 251, 389, 511, 1014
BsmFI GGGAC 2 cut(s) 166, 287
BsmI GAATGC 1 cut(s) 409
BsnI GGCC 2 cut(s) 117, 852
Bso31I GGTCTC 1 cut(s) 511
Bsp1286I GDGCHC 2 cut(s) 343, 681
Bsp1407I TGTACA 1 cut(s) 1121
Bsp143I GATC 2 cut(s) 132, 497
BspANI GGCC 2 cut(s) 117, 852
BspCNI CTCAG 3 cut(s) 475, 625, 773
BspLI GGNNCC 2 cut(s) 116, 966
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 1 cut(s) 645
BspT107I GGYRCC 1 cut(s) 964
BspTI CTTAAG 2 cut(s) 1100, 1234
BspTNI GGTCTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 808
BsrFI RCCGGY 1 cut(s) 34
BsrGI TGTACA 1 cut(s) 1121
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 3 cut(s) 316, 327, 896
BssMI GATC 2 cut(s) 132, 497
BssT1I CCWWGG 1 cut(s) 896
Bst2UI CCWGG 3 cut(s) 317, 328, 554
Bst4CI ACNGT 4 cut(s) 56, 400, 461, 790
Bst6I CTCTTC 1 cut(s) 645
BstAFI CTTAAG 2 cut(s) 1100, 1234
BstAUI TGTACA 1 cut(s) 1121
BstC8I GCNNGC 3 cut(s) 36, 351, 1179
BstDEI CTNAG 5 cut(s) 102, 483, 633, 690, 760
BstENI CCTNNNNNAGG 1 cut(s) 900
BstF5I GGATG 2 cut(s) 892, 1090
BstKTI GATC 2 cut(s) 135, 500
BstMAI GTCTC 5 cut(s) 161, 251, 389, 511, 1014
BstMBI GATC 2 cut(s) 132, 497
BstMWI GCNNNNNNNGC 2 cut(s) 413, 1178
BstNI CCWGG 3 cut(s) 317, 328, 554
BstNSI RCATGY 1 cut(s) 984
BstSCI CCNGG 3 cut(s) 315, 326, 552
BstSLI GKGCMC 1 cut(s) 343
BstV1I GCAGC 7 cut(s) 43, 158, 333, 597, 738, 943, 1167
BstV2I GAAGAC 1 cut(s) 830
BstX2I RGATCY 1 cut(s) 132
BstXI CCANNNNNNTGG 1 cut(s) 740
BstYI RGATCY 1 cut(s) 132
BsuRI GGCC 2 cut(s) 117, 852
BtgZI GCGATG 1 cut(s) 89
BtsCI GGATG 2 cut(s) 892, 1090
BtsI GCAGTG 1 cut(s) 19
BtsIMutI CAGTG 3 cut(s) 19, 147, 405
Cac8I GCNNGC 3 cut(s) 36, 351, 1179
Cfr10I RCCGGY 1 cut(s) 34
Cfr13I GGNCC 1 cut(s) 115
Csp6I GTAC 4 cut(s) 420, 965, 1122, 1228
CviAII CATG 5 cut(s) 382, 452, 872, 981, 1283
CviQI GTAC 4 cut(s) 420, 965, 1122, 1228
DdeI CTNAG 5 cut(s) 102, 483, 633, 690, 760
DpnI GATC 2 cut(s) 134, 499
DpnII GATC 2 cut(s) 132, 497
DraI TTTAAA 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 645
EarI CTCTTC 1 cut(s) 645
Ecl136II GAGCTC 1 cut(s) 679
Eco130I CCWWGG 1 cut(s) 896
Eco147I AGGCCT 1 cut(s) 852
Eco24I GRGCYC 1 cut(s) 681
Eco31I GGTCTC 1 cut(s) 511
Eco32I GATATC 1 cut(s) 250
Eco53kI GAGCTC 1 cut(s) 679
EcoICRI GAGCTC 1 cut(s) 679
EcoNI CCTNNNNNAGG 1 cut(s) 900
EcoO109I RGGNCCY 1 cut(s) 115
EcoRII CCWGG 3 cut(s) 315, 326, 552
EcoRV GATATC 1 cut(s) 250
EcoT14I CCWWGG 1 cut(s) 896
EcoT38I GRGCYC 1 cut(s) 681
ErhI CCWWGG 1 cut(s) 896
FaeI CATG 5 cut(s) 385, 455, 875, 984, 1286
FalI AAGNNNNNCTT 4 cut(s) 639, 671, 822, 854
FaqI GGGAC 2 cut(s) 166, 287
FatI CATG 5 cut(s) 381, 451, 871, 980, 1282
FauNDI CATATG 2 cut(s) 735, 1187
Fnu4HI GCNGC 7 cut(s) 32, 147, 347, 586, 727, 957, 1156
FokI GGATG 2 cut(s) 879, 1097
FriOI GRGCYC 1 cut(s) 681
Fsp4HI GCNGC 7 cut(s) 32, 147, 347, 586, 727, 957, 1156
FspBI CTAG 2 cut(s) 854, 897
GluI GCNGC 7 cut(s) 32, 147, 347, 586, 727, 957, 1156
GsuI CTGGAG 1 cut(s) 1152
HaeIII GGCC 2 cut(s) 117, 852
HapII CCGG 2 cut(s) 35, 720
Hin1II CATG 5 cut(s) 385, 455, 875, 984, 1286
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HindIII AAGCTT 1 cut(s) 351
HinfI GANTC 7 cut(s) 296, 373, 542, 716, 865, 1007, 1105
HpaII CCGG 2 cut(s) 35, 720
HphI GGTGA 2 cut(s) 467, 1004
Hpy166II GTNNAC 1 cut(s) 625
Hpy188I TCNGA 4 cut(s) 763, 782, 1000, 1110
Hpy188III TCNNGA 4 cut(s) 370, 605, 713, 842
Hpy8I GTNNAC 1 cut(s) 625
Hpy99I CGWCG 1 cut(s) 1250
HpyAV CCTTC 7 cut(s) 196, 379, 383, 439, 599, 767, 1104
HpyCH4III ACNGT 4 cut(s) 56, 400, 461, 790
HpyCH4V TGCA 7 cut(s) 31, 349, 726, 882, 916, 980, 1282
HpyF10VI GCNNNNNNNGC 2 cut(s) 413, 1178
HpyF3I CTNAG 5 cut(s) 102, 483, 633, 690, 760
Hsp92II CATG 5 cut(s) 385, 455, 875, 984, 1286
KpnI GGTACC 1 cut(s) 968
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Kzo9I GATC 2 cut(s) 132, 497
LguI GCTCTTC 1 cut(s) 645
LmnI GCTCC 3 cut(s) 190, 684, 1171
Lsp1109I GCAGC 7 cut(s) 43, 158, 333, 597, 738, 943, 1167
LweI GCATC 1 cut(s) 66
MaeI CTAG 2 cut(s) 854, 897
MaeIII GTNAC 3 cut(s) 56, 455, 1034
MalI GATC 2 cut(s) 134, 499
MboI GATC 2 cut(s) 132, 497
MboII GAAGA 9 cut(s) 256, 499, 656, 659, 662, 710, 830, 1087, 1123
MfeI CAATTG 1 cut(s) 237
MflI RGATCY 1 cut(s) 132
MhlI GDGCHC 2 cut(s) 343, 681
MlyI GAGTC 3 cut(s) 710, 1016, 1099
MmeI TCCRAC 1 cut(s) 805
MnlI CCTC 6 cut(s) 181, 330, 532, 687, 896, 1218
MroNI GCCGGC 1 cut(s) 34
MseI TTAA 5 cut(s) 209, 333, 908, 1101, 1235
MslI CAYNNNNRTG 1 cut(s) 738
MspA1I CMGCKG 1 cut(s) 346
MspCI CTTAAG 2 cut(s) 1100, 1234
MspI CCGG 2 cut(s) 35, 720
MspR9I CCNGG 3 cut(s) 317, 328, 554
MunI CAATTG 1 cut(s) 237
Mva1269I GAATGC 1 cut(s) 409
MvaI CCWGG 3 cut(s) 317, 328, 554
MwoI GCNNNNNNNGC 2 cut(s) 413, 1178
NaeI GCCGGC 1 cut(s) 36
NdeI CATATG 2 cut(s) 735, 1187
NdeII GATC 2 cut(s) 132, 497
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 5 cut(s) 385, 455, 875, 984, 1286
NlaIV GGNNCC 2 cut(s) 116, 966
NmeAIII GCCGAG 2 cut(s) 777, 1153
NmuCI GTSAC 3 cut(s) 56, 455, 1034
NspI RCATGY 1 cut(s) 984
PceI AGGCCT 1 cut(s) 852
PciSI GCTCTTC 1 cut(s) 645
PctI GAATGC 1 cut(s) 409
PdiI GCCGGC 1 cut(s) 36
PfeI GAWTC 4 cut(s) 296, 373, 542, 865
PkrI GCNGC 7 cut(s) 33, 148, 348, 587, 728, 958, 1157
PleI GAGTC 3 cut(s) 710, 1015, 1099
PpsI GAGTC 3 cut(s) 710, 1015, 1099
PshBI ATTAAT 1 cut(s) 908
Psp124BI GAGCTC 1 cut(s) 681
Psp6I CCWGG 3 cut(s) 315, 326, 552
PspGI CCWGG 3 cut(s) 315, 326, 552
PspN4I GGNNCC 2 cut(s) 116, 966
PspPI GGNCC 1 cut(s) 115
PsuI RGATCY 1 cut(s) 132
PvuII CAGCTG 1 cut(s) 346
RsaI GTAC 4 cut(s) 421, 966, 1123, 1229
RsaNI GTAC 4 cut(s) 420, 965, 1122, 1228
RseI CAYNNNNRTG 1 cut(s) 738
SacI GAGCTC 1 cut(s) 681
SapI GCTCTTC 1 cut(s) 645
SaqAI TTAA 5 cut(s) 209, 333, 908, 1101, 1235
SatI GCNGC 7 cut(s) 32, 147, 347, 586, 727, 957, 1156
Sau3AI GATC 2 cut(s) 132, 497
Sau96I GGNCC 1 cut(s) 115
SchI GAGTC 3 cut(s) 710, 1016, 1099
ScrFI CCNGG 3 cut(s) 317, 328, 554
SduI GDGCHC 2 cut(s) 343, 681
SfaNI GCATC 1 cut(s) 66
SmiMI CAYNNNNRTG 1 cut(s) 738
SmlI CTYRAG 3 cut(s) 1039, 1100, 1234
SmoI CTYRAG 3 cut(s) 1039, 1100, 1234
SseBI AGGCCT 1 cut(s) 852
SspMI CTAG 2 cut(s) 854, 897
SstI GAGCTC 1 cut(s) 681
StuI AGGCCT 1 cut(s) 852
StyD4I CCNGG 3 cut(s) 315, 326, 552
StyI CCWWGG 1 cut(s) 896
TaaI ACNGT 4 cut(s) 56, 400, 461, 790
TaqI TCGA 7 cut(s) 299, 369, 516, 533, 545, 1027, 1245
TatI WGTACW 1 cut(s) 1121
TfiI GAWTC 4 cut(s) 296, 373, 542, 865
Tru1I TTAA 5 cut(s) 209, 333, 908, 1101, 1235
Tru9I TTAA 5 cut(s) 209, 333, 908, 1101, 1235
TscAI CASTG 3 cut(s) 19, 147, 405
TseFI GTSAC 3 cut(s) 56, 455, 1034
TseI GCWGC 7 cut(s) 31, 146, 346, 585, 726, 956, 1155
Tsp45I GTSAC 3 cut(s) 56, 455, 1034
TspDTI ATGAA 4 cut(s) 317, 398, 458, 786
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 3 cut(s) 19, 147, 405
Vha464I CTTAAG 2 cut(s) 1100, 1234
VspI ATTAAT 1 cut(s) 908
XagI CCTNNNNNAGG 1 cut(s) 900
XapI RAATTY 5 cut(s) 47, 88, 311, 512, 972
XceI RCATGY 1 cut(s) 984
XmaJI CCTAGG 1 cut(s) 896
XspI CTAG 2 cut(s) 854, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.