Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 26 - 203 | 3.6e-30 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 293 - 371 | 7.7e-29 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 408 - 468 | 5.7e-13 | GAG-pre-integrase domain |
| rve | PF00665 | 483 - 583 | 2.1e-15 | Integrase core domain |
| SH3_retrovirus | PF25597 | 657 - 719 | 8.8e-23 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 825 - 1069 | 1.2e-87 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2105 |
| AarI | CACCTGC | 1 cut(s) | 3470 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3254 |
| Acc36I | ACCTGC | 1 cut(s) | 3470 |
| AccB1I | GGYRCC | 2 cut(s) | 1293, 3205 |
| AccI | GTMKAC | 3 cut(s) | 1033, 1560, 2924 |
| AccII | CGCG | 1 cut(s) | 2471 |
| AciI | CCGC | 6 cut(s) | 273, 610, 1479, 1766, 1801, 2730 |
| AclWI | GGATC | 8 cut(s) | 134, 154, 1406, 1956, 2139, 2225, 2444, 2714 |
| AcsI | RAATTY | 8 cut(s) | 359, 483, 854, 1824, 1959, 3026, 3120, 3164 |
| AcuI | CTGAAG | 8 cut(s) | 281, 1248, 1307, 1866, 1935, 1939, 3465, 3884 |
| AcvI | CACGTG | 1 cut(s) | 323 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AflII | CTTAAG | 1 cut(s) | 2843 |
| AflIII | ACRYGT | 4 cut(s) | 322, 906, 1036, 1867 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 556 |
| AjiI | CACGTC | 2 cut(s) | 668, 2167 |
| AjnI | CCWGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| AleI | CACNNNNGTG | 3 cut(s) | 909, 1049, 1273 |
| Alw21I | GWGCWC | 4 cut(s) | 527, 873, 1193, 3506 |
| Alw26I | GTCTC | 7 cut(s) | 245, 1172, 1247, 2253, 2375, 3295, 3547 |
| AlwI | GGATC | 8 cut(s) | 134, 154, 1406, 1956, 2139, 2225, 2444, 2714 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2273 |
| Ama87I | CYCGRG | 1 cut(s) | 2856 |
| AoxI | GGCC | 6 cut(s) | 207, 345, 1737, 1841, 2430, 2649 |
| ApoI | RAATTY | 8 cut(s) | 359, 483, 854, 1824, 1959, 3026, 3120, 3164 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 976 |
| AspA2I | CCTAGG | 1 cut(s) | 757 |
| AspLEI | GCGC | 1 cut(s) | 634 |
| AspS9I | GGNCC | 8 cut(s) | 346, 492, 1481, 2650, 3154, 3175, 3549, 3677 |
| AsuHPI | GGTGA | 8 cut(s) | 1351, 1516, 1669, 2017, 2162, 2322, 2536, 3494 |
| AsuII | TTCGAA | 1 cut(s) | 363 |
| AvaI | CYCGRG | 1 cut(s) | 2856 |
| AvaII | GGWCC | 6 cut(s) | 492, 1481, 3154, 3175, 3549, 3677 |
| AvrII | CCTAGG | 1 cut(s) | 757 |
| AxyI | CCTNAGG | 1 cut(s) | 3508 |
| BaeGI | GKGCMC | 3 cut(s) | 782, 1296, 2294 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 290, 323 |
| BanI | GGYRCC | 2 cut(s) | 1293, 3205 |
| BanII | GRGCYC | 3 cut(s) | 337, 1116, 1314 |
| BauI | CACGAG | 3 cut(s) | 2217, 2918, 2946 |
| BbrPI | CACGTG | 1 cut(s) | 323 |
| BbsI | GAAGAC | 2 cut(s) | 2359, 2472 |
| Bbv12I | GWGCWC | 4 cut(s) | 527, 873, 1193, 3506 |
| BceAI | ACGGC | 2 cut(s) | 1752, 1880 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 129, 163, 332, 343, 366, 377, 2837, 2871 |
| BciT130I | CCWGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| BciVI | GTATCC | 2 cut(s) | 1710, 3452 |
| BclI | TGATCA | 7 cut(s) | 58, 471, 1041, 1261, 1993, 3330, 3484 |
| BcoDI | GTCTC | 7 cut(s) | 245, 1172, 1247, 2253, 2375, 3295, 3547 |
| BfaI | CTAG | 5 cut(s) | 548, 713, 734, 758, 2183 |
| BfmI | CTRYAG | 5 cut(s) | 135, 341, 561, 1100, 3259 |
| BfoI | RGCGCY | 1 cut(s) | 635 |
| BfrI | CTTAAG | 1 cut(s) | 2843 |
| BfuAI | ACCTGC | 1 cut(s) | 3470 |
| BfuI | GTATCC | 2 cut(s) | 1710, 3452 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1448 |
| BglII | AGATCT | 3 cut(s) | 1146, 2958, 3110 |
| BlnI | CCTAGG | 1 cut(s) | 757 |
| BmcAI | AGTACT | 1 cut(s) | 104 |
| Bme1390I | CCNGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| Bme18I | GGWCC | 6 cut(s) | 492, 1481, 3154, 3175, 3549, 3677 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 556 |
| BmeT110I | CYCGRG | 1 cut(s) | 2856 |
| BmgBI | CACGTC | 2 cut(s) | 668, 2167 |
| BmgT120I | GGNCC | 8 cut(s) | 346, 492, 1481, 2650, 3154, 3175, 3549, 3677 |
| BmiI | GGNNCC | 3 cut(s) | 1295, 1483, 3207 |
| BmrFI | CCNGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| BmrI | ACTGGG | 2 cut(s) | 1641, 2710 |
| BmsI | GCATC | 7 cut(s) | 884, 1288, 1373, 1958, 2005, 3620, 3876 |
| BmuI | ACTGGG | 2 cut(s) | 1641, 2710 |
| BpiI | GAAGAC | 2 cut(s) | 2359, 2472 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1664, 1696 |
| BpmI | CTGGAG | 2 cut(s) | 557, 3179 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2595 |
| Bpu14I | TTCGAA | 1 cut(s) | 363 |
| BpuEI | CTTGAG | 3 cut(s) | 1298, 2534, 3132 |
| Bsa29I | ATCGAT | 1 cut(s) | 1879 |
| BsaAI | YACGTR | 2 cut(s) | 323, 814 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2448 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 245, 3295 |
| BsaJI | CCNNGG | 7 cut(s) | 38, 445, 757, 2234, 3088, 3415, 3917 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 378, 408, 2134, 2164, 2302, 2332, 3228, 3258 |
| Bse21I | CCTNAGG | 1 cut(s) | 3508 |
| Bse3DI | GCAATG | 3 cut(s) | 1971, 2144, 2254 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2448 |
| BseBI | CCWGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| BseCI | ATCGAT | 1 cut(s) | 1879 |
| BseDI | CCNNGG | 7 cut(s) | 38, 445, 757, 2234, 3088, 3415, 3917 |
| BseGI | GGATG | 8 cut(s) | 466, 870, 899, 924, 1973, 2373, 3333, 3802 |
| BseJI | GATNNNNATC | 1 cut(s) | 2448 |
| BseMI | GCAATG | 3 cut(s) | 1971, 2144, 2254 |
| BseRI | GAGGAG | 3 cut(s) | 1237, 1680, 3249 |
| BseSI | GKGCMC | 3 cut(s) | 782, 1296, 2294 |
| BsgI | GTGCAG | 4 cut(s) | 303, 356, 2673, 3722 |
| Bsh1236I | CGCG | 1 cut(s) | 2471 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3745 |
| BshFI | GGCC | 6 cut(s) | 209, 347, 1739, 1843, 2432, 2651 |
| BshNI | GGYRCC | 2 cut(s) | 1293, 3205 |
| BshVI | ATCGAT | 1 cut(s) | 1879 |
| BsiEI | CGRYCG | 1 cut(s) | 3745 |
| BsiHKAI | GWGCWC | 4 cut(s) | 527, 873, 1193, 3506 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2856 |
| BslFI | GGGAC | 4 cut(s) | 302, 1359, 2355, 3418 |
| BsmAI | GTCTC | 7 cut(s) | 245, 1172, 1247, 2253, 2375, 3295, 3547 |
| BsmBI | CGTCTC | 1 cut(s) | 2253 |
| BsmFI | GGGAC | 4 cut(s) | 302, 1359, 2355, 3418 |
| BsmI | GAATGC | 2 cut(s) | 1637, 2197 |
| BsnI | GGCC | 6 cut(s) | 209, 347, 1739, 1843, 2432, 2651 |
| Bso31I | GGTCTC | 2 cut(s) | 245, 3295 |
| BsoBI | CYCGRG | 1 cut(s) | 2856 |
| Bsp119I | TTCGAA | 1 cut(s) | 363 |
| Bsp1407I | TGTACA | 1 cut(s) | 1864 |
| BspACI | CCGC | 6 cut(s) | 273, 610, 1479, 1766, 1801, 2730 |
| BspANI | GGCC | 6 cut(s) | 209, 347, 1739, 1843, 2432, 2651 |
| BspDI | ATCGAT | 1 cut(s) | 1879 |
| BspFNI | CGCG | 1 cut(s) | 2471 |
| BspHI | TCATGA | 1 cut(s) | 2335 |
| BspLI | GGNNCC | 3 cut(s) | 1295, 1483, 3207 |
| BspMAI | CTGCAG | 3 cut(s) | 139, 345, 1104 |
| BspMI | ACCTGC | 1 cut(s) | 3470 |
| BspPI | GGATC | 8 cut(s) | 134, 154, 1406, 1956, 2139, 2225, 2444, 2714 |
| BspQI | GCTCTTC | 2 cut(s) | 1224, 3494 |
| BspT104I | TTCGAA | 1 cut(s) | 363 |
| BspT107I | GGYRCC | 2 cut(s) | 1293, 3205 |
| BspTI | CTTAAG | 1 cut(s) | 2843 |
| BspTNI | GGTCTC | 2 cut(s) | 245, 3295 |
| BsrDI | GCAATG | 3 cut(s) | 1971, 2144, 2254 |
| BsrGI | TGTACA | 1 cut(s) | 1864 |
| BssECI | CCNNGG | 7 cut(s) | 38, 445, 757, 2234, 3088, 3415, 3917 |
| BssNAI | GTATAC | 2 cut(s) | 1034, 2925 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 3 cut(s) | 2217, 2918, 2946 |
| BssT1I | CCWWGG | 3 cut(s) | 38, 757, 3088 |
| Bst1107I | GTATAC | 2 cut(s) | 1034, 2925 |
| Bst2BI | CACGAG | 3 cut(s) | 2217, 2918, 2946 |
| Bst2UI | CCWGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| Bst6I | CTCTTC | 5 cut(s) | 691, 1224, 2121, 2400, 3494 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 2843 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3617 |
| BstAUI | TGTACA | 1 cut(s) | 1864 |
| BstBAI | YACGTR | 2 cut(s) | 323, 814 |
| BstBI | TTCGAA | 1 cut(s) | 363 |
| BstC8I | GCNNGC | 8 cut(s) | 345, 1219, 1400, 1696, 2971, 3622, 3752, 3813 |
| BstDSI | CCRYGG | 1 cut(s) | 445 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 353, 3791 |
| BstF5I | GGATG | 8 cut(s) | 466, 870, 899, 924, 1973, 2373, 3333, 3802 |
| BstFNI | CGCG | 1 cut(s) | 2471 |
| BstH2I | RGCGCY | 1 cut(s) | 635 |
| BstHHI | GCGC | 1 cut(s) | 634 |
| BstMAI | GTCTC | 7 cut(s) | 245, 1172, 1247, 2253, 2375, 3295, 3547 |
| BstMCI | CGRYCG | 1 cut(s) | 3745 |
| BstNI | CCWGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| BstNSI | RCATGY | 9 cut(s) | 910, 1040, 1435, 1469, 1597, 1810, 1871, 2973, 3624 |
| BstSCI | CCNGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| BstSFI | CTRYAG | 5 cut(s) | 135, 341, 561, 1100, 3259 |
| BstSLI | GKGCMC | 3 cut(s) | 782, 1296, 2294 |
| BstSNI | TACGTA | 1 cut(s) | 814 |
| BstUI | CGCG | 1 cut(s) | 2471 |
| BstV2I | GAAGAC | 2 cut(s) | 2359, 2472 |
| BstX2I | RGATCY | 6 cut(s) | 1146, 1411, 2449, 2706, 2958, 3110 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2364 |
| BstYI | RGATCY | 6 cut(s) | 1146, 1411, 2449, 2706, 2958, 3110 |
| BstZ17I | GTATAC | 2 cut(s) | 1034, 2925 |
| Bsu15I | ATCGAT | 1 cut(s) | 1879 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3508 |
| BsuI | GTATCC | 2 cut(s) | 1710, 3452 |
| BsuRI | GGCC | 6 cut(s) | 209, 347, 1739, 1843, 2432, 2651 |
| BsuTUI | ATCGAT | 1 cut(s) | 1879 |
| BtgI | CCRYGG | 1 cut(s) | 445 |
| BtgZI | GCGATG | 2 cut(s) | 1268, 3810 |
| BtrI | CACGTC | 2 cut(s) | 668, 2167 |
| BtsCI | GGATG | 8 cut(s) | 466, 870, 899, 924, 1973, 2373, 3333, 3802 |
| BtsI | GCAGTG | 3 cut(s) | 129, 745, 1215 |
| BveI | ACCTGC | 1 cut(s) | 3470 |
| Cac8I | GCNNGC | 8 cut(s) | 345, 1219, 1400, 1696, 2971, 3622, 3752, 3813 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2273 |
| CciI | TCATGA | 1 cut(s) | 2335 |
| CfoI | GCGC | 1 cut(s) | 634 |
| Cfr13I | GGNCC | 8 cut(s) | 346, 492, 1481, 2650, 3154, 3175, 3549, 3677 |
| ClaI | ATCGAT | 1 cut(s) | 1879 |
| CseI | GACGC | 3 cut(s) | 1941, 2477, 3338 |
| CsiI | ACCWGGT | 1 cut(s) | 3786 |
| DraI | TTTAAA | 1 cut(s) | 3216 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3254 |
| DriI | GACNNNNNGTC | 1 cut(s) | 556 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3254 |
| Eam1104I | CTCTTC | 5 cut(s) | 691, 1224, 2121, 2400, 3494 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 556 |
| EarI | CTCTTC | 5 cut(s) | 691, 1224, 2121, 2400, 3494 |
| EciI | GGCGGA | 1 cut(s) | 1781 |
| Eco105I | TACGTA | 1 cut(s) | 814 |
| Eco130I | CCWWGG | 3 cut(s) | 38, 757, 3088 |
| Eco24I | GRGCYC | 3 cut(s) | 337, 1116, 1314 |
| Eco31I | GGTCTC | 2 cut(s) | 245, 3295 |
| Eco47I | GGWCC | 6 cut(s) | 492, 1481, 3154, 3175, 3549, 3677 |
| Eco57I | CTGAAG | 8 cut(s) | 281, 1248, 1307, 1866, 1935, 1939, 3465, 3884 |
| Eco72I | CACGTG | 1 cut(s) | 323 |
| Eco81I | CCTNAGG | 1 cut(s) | 3508 |
| Eco88I | CYCGRG | 1 cut(s) | 2856 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 353, 3791 |
| EcoO109I | RGGNCCY | 2 cut(s) | 346, 3154 |
| EcoRI | GAATTC | 2 cut(s) | 359, 854 |
| EcoRII | CCWGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| EcoT14I | CCWWGG | 3 cut(s) | 38, 757, 3088 |
| EcoT22I | ATGCAT | 1 cut(s) | 1973 |
| EcoT38I | GRGCYC | 3 cut(s) | 337, 1116, 1314 |
| ErhI | CCWWGG | 3 cut(s) | 38, 757, 3088 |
| Esp3I | CGTCTC | 1 cut(s) | 2253 |
| FaqI | GGGAC | 4 cut(s) | 302, 1359, 2355, 3418 |
| FauNDI | CATATG | 2 cut(s) | 284, 1475 |
| FbaI | TGATCA | 7 cut(s) | 58, 471, 1041, 1261, 1993, 3330, 3484 |
| FblI | GTMKAC | 3 cut(s) | 1033, 1560, 2924 |
| FokI | GGATG | 8 cut(s) | 473, 877, 906, 931, 1980, 2380, 3320, 3809 |
| FriOI | GRGCYC | 3 cut(s) | 337, 1116, 1314 |
| FspBI | CTAG | 5 cut(s) | 548, 713, 734, 758, 2183 |
| GlaI | GCGC | 1 cut(s) | 633 |
| GsuI | CTGGAG | 2 cut(s) | 557, 3179 |
| HaeII | RGCGCY | 1 cut(s) | 635 |
| HaeIII | GGCC | 6 cut(s) | 209, 347, 1739, 1843, 2432, 2651 |
| HgaI | GACGC | 3 cut(s) | 1941, 2477, 3338 |
| HhaI | GCGC | 1 cut(s) | 634 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 1 cut(s) | 632 |
| HinP1I | GCGC | 1 cut(s) | 632 |
| HincII | GTYRAC | 7 cut(s) | 729, 1731, 2609, 3247, 3412, 3852, 3871 |
| HindII | GTYRAC | 7 cut(s) | 729, 1731, 2609, 3247, 3412, 3852, 3871 |
| HindIII | AAGCTT | 3 cut(s) | 1602, 1696, 1834 |
| HpaI | GTTAAC | 2 cut(s) | 1731, 3852 |
| HphI | GGTGA | 8 cut(s) | 1351, 1516, 1669, 2017, 2162, 2322, 2536, 3494 |
| Hpy99I | CGWCG | 1 cut(s) | 2771 |
| HpyCH4IV | ACGT | 7 cut(s) | 322, 667, 813, 1030, 2166, 2253, 3396 |
| HpySE526I | ACGT | 7 cut(s) | 322, 667, 813, 1030, 2166, 2253, 3396 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 1 cut(s) | 632 |
| Ksp22I | TGATCA | 7 cut(s) | 58, 471, 1041, 1261, 1993, 3330, 3484 |
| KspAI | GTTAAC | 2 cut(s) | 1731, 3852 |
| LguI | GCTCTTC | 2 cut(s) | 1224, 3494 |
| LmnI | GCTCC | 5 cut(s) | 868, 1803, 3346, 3536, 3667 |
| LweI | GCATC | 7 cut(s) | 884, 1288, 1373, 1958, 2005, 3620, 3876 |
| MabI | ACCWGGT | 1 cut(s) | 3786 |
| MaeI | CTAG | 5 cut(s) | 548, 713, 734, 758, 2183 |
| MaeII | ACGT | 7 cut(s) | 322, 667, 813, 1030, 2166, 2253, 3396 |
| MaeIII | GTNAC | 6 cut(s) | 640, 2150, 2221, 2600, 3571, 3782 |
| MflI | RGATCY | 6 cut(s) | 1146, 1411, 2449, 2706, 2958, 3110 |
| MlyI | GAGTC | 8 cut(s) | 284, 660, 881, 2285, 2320, 2814, 2888, 3664 |
| MmeI | TCCRAC | 4 cut(s) | 2236, 2281, 3377, 3704 |
| Mph1103I | ATGCAT | 1 cut(s) | 1973 |
| MroXI | GAANNNNTTC | 1 cut(s) | 976 |
| MslI | CAYNNNNRTG | 8 cut(s) | 750, 909, 1049, 1273, 1287, 1787, 1983, 2362 |
| MspA1I | CMGCKG | 2 cut(s) | 1099, 1273 |
| MspCI | CTTAAG | 1 cut(s) | 2843 |
| MspR9I | CCNGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| Mva1269I | GAATGC | 2 cut(s) | 1637, 2197 |
| MvaI | CCWGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| MvnI | CGCG | 1 cut(s) | 2471 |
| NdeI | CATATG | 2 cut(s) | 284, 1475 |
| NlaIV | GGNNCC | 3 cut(s) | 1295, 1483, 3207 |
| NmeAIII | GCCGAG | 1 cut(s) | 2135 |
| NmuCI | GTSAC | 3 cut(s) | 2150, 2221, 3782 |
| NsiI | ATGCAT | 1 cut(s) | 1973 |
| NspI | RCATGY | 9 cut(s) | 910, 1040, 1435, 1469, 1597, 1810, 1871, 2973, 3624 |
| NspV | TTCGAA | 1 cut(s) | 363 |
| OliI | CACNNNNGTG | 3 cut(s) | 909, 1049, 1273 |
| PaeI | GCATGC | 2 cut(s) | 2973, 3624 |
| PaeR7I | CTCGAG | 1 cut(s) | 2856 |
| PagI | TCATGA | 1 cut(s) | 2335 |
| PaqCI | CACCTGC | 1 cut(s) | 3470 |
| PciI | ACATGT | 3 cut(s) | 906, 1036, 1867 |
| PciSI | GCTCTTC | 2 cut(s) | 1224, 3494 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2259 |
| PctI | GAATGC | 2 cut(s) | 1637, 2197 |
| PdmI | GAANNNNTTC | 1 cut(s) | 976 |
| PflFI | GACNNNGTC | 3 cut(s) | 515, 669, 3788 |
| PfoI | TCCNGGA | 1 cut(s) | 3156 |
| PleI | GAGTC | 8 cut(s) | 284, 659, 881, 2284, 2319, 2814, 2887, 3663 |
| PmaCI | CACGTG | 1 cut(s) | 323 |
| PmlI | CACGTG | 1 cut(s) | 323 |
| PpsI | GAGTC | 8 cut(s) | 284, 659, 881, 2284, 2319, 2814, 2887, 3663 |
| Ppu21I | YACGTR | 2 cut(s) | 323, 814 |
| PpuMI | RGGWCCY | 1 cut(s) | 3154 |
| PscI | ACATGT | 3 cut(s) | 906, 1036, 1867 |
| PsiI | TTATAA | 1 cut(s) | 2105 |
| Psp5II | RGGWCCY | 1 cut(s) | 3154 |
| Psp6I | CCWGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| PspCI | CACGTG | 1 cut(s) | 323 |
| PspGI | CCWGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| PspN4I | GGNNCC | 3 cut(s) | 1295, 1483, 3207 |
| PspPI | GGNCC | 8 cut(s) | 346, 492, 1481, 2650, 3154, 3175, 3549, 3677 |
| PspPPI | RGGWCCY | 1 cut(s) | 3154 |
| PspXI | VCTCGAGB | 1 cut(s) | 2856 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2915, 2947 |
| PstI | CTGCAG | 3 cut(s) | 139, 345, 1104 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2273 |
| PsuI | RGATCY | 6 cut(s) | 1146, 1411, 2449, 2706, 2958, 3110 |
| PsyI | GACNNNGTC | 3 cut(s) | 515, 669, 3788 |
| PvuII | CAGCTG | 2 cut(s) | 1099, 1273 |
| RseI | CAYNNNNRTG | 8 cut(s) | 750, 909, 1049, 1273, 1287, 1787, 1983, 2362 |
| SapI | GCTCTTC | 2 cut(s) | 1224, 3494 |
| Sau96I | GGNCC | 8 cut(s) | 346, 492, 1481, 2650, 3154, 3175, 3549, 3677 |
| ScaI | AGTACT | 1 cut(s) | 104 |
| SchI | GAGTC | 8 cut(s) | 284, 660, 881, 2285, 2320, 2814, 2888, 3664 |
| ScrFI | CCNGG | 9 cut(s) | 2235, 2505, 2781, 2863, 3158, 3210, 3416, 3788, 3918 |
| SexAI | ACCWGGT | 1 cut(s) | 3786 |
| SfaNI | GCATC | 7 cut(s) | 884, 1288, 1373, 1958, 2005, 3620, 3876 |
| SfcI | CTRYAG | 5 cut(s) | 135, 341, 561, 1100, 3259 |
| Sfr274I | CTCGAG | 1 cut(s) | 2856 |
| SfuI | TTCGAA | 1 cut(s) | 363 |
| SinI | GGWCC | 6 cut(s) | 492, 1481, 3154, 3175, 3549, 3677 |
| SlaI | CTCGAG | 1 cut(s) | 2856 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 750, 909, 1049, 1273, 1287, 1787, 1983, 2362 |
| SmlI | CTYRAG | 5 cut(s) | 1313, 2549, 2843, 2856, 3147 |
| SmoI | CTYRAG | 5 cut(s) | 1313, 2549, 2843, 2856, 3147 |
| SnaBI | TACGTA | 1 cut(s) | 814 |
| SphI | GCATGC | 2 cut(s) | 2973, 3624 |
| SsiI | CCGC | 6 cut(s) | 273, 610, 1479, 1766, 1801, 2730 |
| SspI | AATATT | 1 cut(s) | 246 |
| SspMI | CTAG | 5 cut(s) | 548, 713, 734, 758, 2183 |
| StyD4I | CCNGG | 9 cut(s) | 2233, 2503, 2779, 2861, 3156, 3208, 3414, 3786, 3916 |
| StyI | CCWWGG | 3 cut(s) | 38, 757, 3088 |
| TaiI | ACGT | 7 cut(s) | 325, 670, 816, 1033, 2169, 2256, 3399 |
| TaqII | GACCGA | 1 cut(s) | 1082 |
| TatI | WGTACW | 7 cut(s) | 102, 163, 1462, 1864, 2574, 3190, 3733 |
| TauI | GCSGC | 1 cut(s) | 612 |
| TseFI | GTSAC | 3 cut(s) | 2150, 2221, 3782 |
| Tsp45I | GTSAC | 3 cut(s) | 2150, 2221, 3782 |
| TspGWI | ACGGA | 4 cut(s) | 63, 80, 462, 1773 |
| Tth111I | GACNNNGTC | 3 cut(s) | 515, 669, 3788 |
| Vha464I | CTTAAG | 1 cut(s) | 2843 |
| VpaK11BI | GGWCC | 6 cut(s) | 492, 1481, 3154, 3175, 3549, 3677 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 353, 3791 |
| XapI | RAATTY | 8 cut(s) | 359, 483, 854, 1824, 1959, 3026, 3120, 3164 |
| XceI | RCATGY | 9 cut(s) | 910, 1040, 1435, 1469, 1597, 1810, 1871, 2973, 3624 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1792, 1836 |
| XhoI | CTCGAG | 1 cut(s) | 2856 |
| XmaJI | CCTAGG | 1 cut(s) | 757 |
| XmiI | GTMKAC | 3 cut(s) | 1033, 1560, 2924 |
| XmnI | GAANNNNTTC | 1 cut(s) | 976 |
| XspI | CTAG | 5 cut(s) | 548, 713, 734, 758, 2183 |
| ZrmI | AGTACT | 1 cut(s) | 104 |
| Zsp2I | ATGCAT | 1 cut(s) | 1973 |