Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 143 |
| AccI | GTMKAC | 1 cut(s) | 1245 |
| AciI | CCGC | 2 cut(s) | 91, 705 |
| AclWI | GGATC | 2 cut(s) | 28, 486 |
| AcoI | YGGCCR | 2 cut(s) | 3, 49 |
| AcsI | RAATTY | 4 cut(s) | 16, 506, 627, 737 |
| AcuI | CTGAAG | 1 cut(s) | 209 |
| AfaI | GTAC | 5 cut(s) | 104, 674, 716, 1137, 1202 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 143, 379, 851 |
| AgsI | TTSAA | 9 cut(s) | 119, 196, 227, 411, 551, 589, 745, 920, 991 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 900, 932 |
| AleI | CACNNNNGTG | 1 cut(s) | 323 |
| Alw26I | GTCTC | 3 cut(s) | 245, 1089, 1186 |
| AlwI | GGATC | 2 cut(s) | 28, 486 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 143, 340 |
| AoxI | GGCC | 2 cut(s) | 3, 49 |
| ApoI | RAATTY | 4 cut(s) | 16, 506, 627, 737 |
| AspS9I | GGNCC | 3 cut(s) | 315, 484, 1166 |
| AvaII | GGWCC | 3 cut(s) | 315, 484, 1166 |
| BalI | TGGCCA | 2 cut(s) | 5, 51 |
| BbsI | GAAGAC | 1 cut(s) | 1025 |
| BccI | CCATC | 3 cut(s) | 41, 631, 1178 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 332, 366 |
| BciVI | GTATCC | 1 cut(s) | 794 |
| BcoDI | GTCTC | 3 cut(s) | 245, 1089, 1186 |
| BfaI | CTAG | 1 cut(s) | 1056 |
| BfmI | CTRYAG | 1 cut(s) | 1139 |
| BfuI | GTATCC | 1 cut(s) | 794 |
| BglII | AGATCT | 1 cut(s) | 199 |
| BmcAI | AGTACT | 2 cut(s) | 104, 716 |
| Bme18I | GGWCC | 3 cut(s) | 315, 484, 1166 |
| BmgT120I | GGNCC | 3 cut(s) | 315, 484, 1166 |
| BmiI | GGNNCC | 2 cut(s) | 316, 1168 |
| BmsI | GCATC | 5 cut(s) | 280, 760, 850, 937, 959 |
| BpiI | GAAGAC | 1 cut(s) | 1025 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| Bpu10I | CCTNAGC | 1 cut(s) | 864 |
| BpuEI | CTTGAG | 3 cut(s) | 188, 479, 1018 |
| BsaBI | GATNNNNATC | 1 cut(s) | 240 |
| BsaI | GGTCTC | 2 cut(s) | 245, 1089 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 92, 122, 176, 206, 378, 408, 1247, 1277 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 143, 379, 851 |
| Bse1I | ACTGG | 2 cut(s) | 110, 1178 |
| Bse8I | GATNNNNATC | 1 cut(s) | 240 |
| BseGI | GGATG | 4 cut(s) | 295, 841, 903, 1170 |
| BseJI | GATNNNNATC | 1 cut(s) | 240 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 143, 379, 851 |
| BseMII | CTCAG | 2 cut(s) | 878, 1257 |
| BseNI | ACTGG | 2 cut(s) | 110, 1178 |
| BseRI | GAGGAG | 2 cut(s) | 197, 548 |
| BsgI | GTGCAG | 1 cut(s) | 44 |
| BshFI | GGCC | 2 cut(s) | 5, 51 |
| BslFI | GGGAC | 2 cut(s) | 667, 1152 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 143, 379, 851 |
| BsmAI | GTCTC | 3 cut(s) | 245, 1089, 1186 |
| BsmFI | GGGAC | 2 cut(s) | 667, 1152 |
| BsnI | GGCC | 2 cut(s) | 5, 51 |
| Bso31I | GGTCTC | 2 cut(s) | 245, 1089 |
| Bsp143I | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| BspACI | CCGC | 2 cut(s) | 91, 705 |
| BspANI | GGCC | 2 cut(s) | 5, 51 |
| BspCNI | CTCAG | 2 cut(s) | 877, 1258 |
| BspHI | TCATGA | 1 cut(s) | 646 |
| BspLI | GGNNCC | 2 cut(s) | 316, 1168 |
| BspMAI | CTGCAG | 1 cut(s) | 1143 |
| BspPI | GGATC | 2 cut(s) | 28, 486 |
| BspQI | GCTCTTC | 1 cut(s) | 354 |
| BspTNI | GGTCTC | 2 cut(s) | 245, 1089 |
| BsrI | ACTGG | 2 cut(s) | 110, 1178 |
| BssMI | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| BssNAI | GTATAC | 1 cut(s) | 1246 |
| Bst1107I | GTATAC | 1 cut(s) | 1246 |
| Bst4CI | ACNGT | 4 cut(s) | 754, 784, 887, 1135 |
| Bst6I | CTCTTC | 4 cut(s) | 354, 546, 606, 1062 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 1 cut(s) | 345 |
| BstDEI | CTNAG | 5 cut(s) | 210, 676, 774, 864, 1266 |
| BstEII | GGTNACC | 1 cut(s) | 868 |
| BstF5I | GGATG | 4 cut(s) | 295, 841, 903, 1170 |
| BstKTI | GATC | 6 cut(s) | 36, 202, 238, 244, 494, 810 |
| BstMAI | GTCTC | 3 cut(s) | 245, 1089, 1186 |
| BstMBI | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 149, 340, 599, 1124 |
| BstPI | GGTNACC | 1 cut(s) | 868 |
| BstSFI | CTRYAG | 1 cut(s) | 1139 |
| BstV2I | GAAGAC | 1 cut(s) | 1025 |
| BstX2I | RGATCY | 1 cut(s) | 199 |
| BstYI | RGATCY | 1 cut(s) | 199 |
| BstZ17I | GTATAC | 1 cut(s) | 1246 |
| BsuI | GTATCC | 1 cut(s) | 794 |
| BsuRI | GGCC | 2 cut(s) | 5, 51 |
| BtsCI | GGATG | 4 cut(s) | 295, 841, 903, 1170 |
| BtsI | GCAGTG | 1 cut(s) | 477 |
| BtsIMutI | CAGTG | 1 cut(s) | 477 |
| Cac8I | GCNNGC | 1 cut(s) | 345 |
| CaiI | CAGNNNCTG | 2 cut(s) | 143, 340 |
| CciI | TCATGA | 1 cut(s) | 646 |
| Cfr13I | GGNCC | 3 cut(s) | 315, 484, 1166 |
| Csp6I | GTAC | 5 cut(s) | 103, 673, 715, 1136, 1201 |
| CviQI | GTAC | 5 cut(s) | 103, 673, 715, 1136, 1201 |
| DdeI | CTNAG | 5 cut(s) | 210, 676, 774, 864, 1266 |
| DpnI | GATC | 6 cut(s) | 35, 201, 237, 243, 493, 809 |
| DpnII | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| EaeI | YGGCCR | 2 cut(s) | 3, 49 |
| Eam1104I | CTCTTC | 4 cut(s) | 354, 546, 606, 1062 |
| EarI | CTCTTC | 4 cut(s) | 354, 546, 606, 1062 |
| Eco31I | GGTCTC | 2 cut(s) | 245, 1089 |
| Eco47I | GGWCC | 3 cut(s) | 315, 484, 1166 |
| Eco57I | CTGAAG | 1 cut(s) | 209 |
| Eco91I | GGTNACC | 1 cut(s) | 868 |
| EcoO109I | RGGNCCY | 1 cut(s) | 484 |
| EcoO65I | GGTNACC | 1 cut(s) | 868 |
| EcoRI | GAATTC | 1 cut(s) | 737 |
| EcoT22I | ATGCAT | 2 cut(s) | 843, 952 |
| FaqI | GGGAC | 2 cut(s) | 667, 1152 |
| FauNDI | CATATG | 3 cut(s) | 699, 966, 1160 |
| FblI | GTMKAC | 1 cut(s) | 1245 |
| FokI | GGATG | 4 cut(s) | 302, 828, 890, 1157 |
| FspBI | CTAG | 1 cut(s) | 1056 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HaeIII | GGCC | 2 cut(s) | 5, 51 |
| HindIII | AAGCTT | 2 cut(s) | 455, 758 |
| HinfI | GANTC | 4 cut(s) | 11, 389, 536, 680 |
| Hpy166II | GTNNAC | 3 cut(s) | 134, 318, 1246 |
| Hpy188I | TCNGA | 5 cut(s) | 727, 946, 1107, 1156, 1267 |
| Hpy188III | TCNNGA | 4 cut(s) | 239, 411, 647, 845 |
| Hpy8I | GTNNAC | 3 cut(s) | 134, 318, 1246 |
| HpyAV | CCTTC | 6 cut(s) | 39, 373, 377, 475, 610, 1184 |
| HpyCH4III | ACNGT | 4 cut(s) | 754, 784, 887, 1135 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 149, 340, 599, 1124 |
| HpyF3I | CTNAG | 5 cut(s) | 210, 676, 774, 864, 1266 |
| Kzo9I | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| LguI | GCTCTTC | 1 cut(s) | 354 |
| LmnI | GCTCC | 2 cut(s) | 184, 1255 |
| LweI | GCATC | 5 cut(s) | 280, 760, 850, 937, 959 |
| MaeI | CTAG | 1 cut(s) | 1056 |
| MaeIII | GTNAC | 4 cut(s) | 707, 868, 926, 1024 |
| MalI | GATC | 6 cut(s) | 35, 201, 237, 243, 493, 809 |
| MboI | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| MboII | GAAGA | 8 cut(s) | 184, 341, 563, 623, 635, 733, 1025, 1079 |
| MfeI | CAATTG | 2 cut(s) | 231, 528 |
| MflI | RGATCY | 1 cut(s) | 199 |
| MlsI | TGGCCA | 2 cut(s) | 5, 51 |
| MluNI | TGGCCA | 2 cut(s) | 5, 51 |
| MlyI | GAGTC | 2 cut(s) | 545, 674 |
| MmeI | TCCRAC | 2 cut(s) | 159, 931 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 51 |
| Mph1103I | ATGCAT | 2 cut(s) | 843, 952 |
| MscI | TGGCCA | 2 cut(s) | 5, 51 |
| MseI | TTAA | 2 cut(s) | 984, 1285 |
| MslI | CAYNNNNRTG | 2 cut(s) | 323, 958 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 51 |
| MspA1I | CMGCKG | 2 cut(s) | 143, 340 |
| MunI | CAATTG | 2 cut(s) | 231, 528 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 149, 340, 599, 1124 |
| NdeI | CATATG | 3 cut(s) | 699, 966, 1160 |
| NdeII | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| NlaIV | GGNNCC | 2 cut(s) | 316, 1168 |
| NmuCI | GTSAC | 1 cut(s) | 1024 |
| NsiI | ATGCAT | 2 cut(s) | 843, 952 |
| OliI | CACNNNNGTG | 1 cut(s) | 323 |
| PagI | TCATGA | 1 cut(s) | 646 |
| PciSI | GCTCTTC | 1 cut(s) | 354 |
| PfeI | GAWTC | 2 cut(s) | 11, 389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 143 |
| PleI | GAGTC | 2 cut(s) | 544, 674 |
| PpsI | GAGTC | 2 cut(s) | 544, 674 |
| PpuMI | RGGWCCY | 1 cut(s) | 484 |
| Psp5II | RGGWCCY | 1 cut(s) | 484 |
| PspEI | GGTNACC | 1 cut(s) | 868 |
| PspN4I | GGNNCC | 2 cut(s) | 316, 1168 |
| PspPI | GGNCC | 3 cut(s) | 315, 484, 1166 |
| PspPPI | RGGWCCY | 1 cut(s) | 484 |
| PstI | CTGCAG | 1 cut(s) | 1143 |
| PstNI | CAGNNNCTG | 2 cut(s) | 143, 340 |
| PsuI | RGATCY | 1 cut(s) | 199 |
| PvuII | CAGCTG | 2 cut(s) | 143, 340 |
| RsaI | GTAC | 5 cut(s) | 104, 674, 716, 1137, 1202 |
| RsaNI | GTAC | 5 cut(s) | 103, 673, 715, 1136, 1201 |
| RseI | CAYNNNNRTG | 2 cut(s) | 323, 958 |
| SapI | GCTCTTC | 1 cut(s) | 354 |
| SaqAI | TTAA | 2 cut(s) | 984, 1285 |
| Sau3AI | GATC | 6 cut(s) | 33, 199, 235, 241, 491, 807 |
| Sau96I | GGNCC | 3 cut(s) | 315, 484, 1166 |
| ScaI | AGTACT | 2 cut(s) | 104, 716 |
| SchI | GAGTC | 2 cut(s) | 545, 674 |
| SfaNI | GCATC | 5 cut(s) | 280, 760, 850, 937, 959 |
| SfcI | CTRYAG | 1 cut(s) | 1139 |
| SinI | GGWCC | 3 cut(s) | 315, 484, 1166 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 323, 958 |
| SmlI | CTYRAG | 3 cut(s) | 203, 458, 997 |
| SmoI | CTYRAG | 3 cut(s) | 203, 458, 997 |
| SsiI | CCGC | 2 cut(s) | 91, 705 |
| SspMI | CTAG | 1 cut(s) | 1056 |
| TaaI | ACNGT | 4 cut(s) | 754, 784, 887, 1135 |
| TaqI | TCGA | 3 cut(s) | 32, 45, 539 |
| TatI | WGTACW | 2 cut(s) | 102, 714 |
| TfiI | GAWTC | 2 cut(s) | 11, 389 |
| Tru1I | TTAA | 2 cut(s) | 984, 1285 |
| Tru9I | TTAA | 2 cut(s) | 984, 1285 |
| TscAI | CASTG | 1 cut(s) | 477 |
| TseFI | GTSAC | 1 cut(s) | 1024 |
| Tsp45I | GTSAC | 1 cut(s) | 1024 |
| TspDTI | ATGAA | 8 cut(s) | 76, 138, 311, 392, 434, 750, 1139, 1240 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| TspRI | CASTG | 1 cut(s) | 477 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 143 |
| VpaK11BI | GGWCC | 3 cut(s) | 315, 484, 1166 |
| XapI | RAATTY | 4 cut(s) | 16, 506, 627, 737 |
| XmiI | GTMKAC | 1 cut(s) | 1245 |
| XspI | CTAG | 1 cut(s) | 1056 |
| ZrmI | AGTACT | 2 cut(s) | 104, 716 |
| Zsp2I | ATGCAT | 2 cut(s) | 843, 952 |