MD17G1077500.v1.1

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000154
Physical Location & Seq
Forward (+)
6404349 .. 6406487
2139 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1077500.v1.1.491

Sequence Viewer

Length: 2139 bp
ATGTTGGAGAAGAAGGTTCCACTTGAATTCTGGGCTGAGGCAGTCAATACCTCTGTGTACATTCTGAATCGATGCCCAACCAAAGCCTTACATAAGAAGACACCTTTTGAAGCTTACAGTGGGAGAAAACCAGGAATTAAGCATCTAAAAGTGTTTGGTTCTTTGTGTTATGCTCATGTGCCAAGTCAACAGAGACAAAAACTCGATTTGGCAAGCAAGAGGTGTATTTTCTTGGGATATGGTAGTTGTGAGAAGGGATATAGACTGTATAACATTGAATCTGGAAAGGTGACTATTTCCAGAGATGTTGTGTTTAATGAAGAAGCATGTTGGGATTGGAATGCACAGAAGGAAAGAAGGGAGAGTATCCAGATCATTGAAATGTCTGCAGGAGAACAAAACTGTGAAGGAAGTGCTTGTGATTCTGAAACACAATGTGAAGTCAGTGAAGAGAATGTTGGGTCAGATTTAGTTACTGAGCTATCTGATCAAGAAAGAGTGACAAGTCCACAGGATTTTGATCACACTCCTCTCAAGTACAGAAACATTGCAGAAATATATGAAAAGTGTAATATGTGCATAATAGAACCCGAATGTTTTGAAGAGGCTGCCAAGGATGAATCATGGCAGAAGGCTATGGAAGATGAAATCTCTATGATTGAGAAGAATCATACTTGGGATCTTGTTGATAGACCATTTGATAAACCAATCATTGGAGTCAAATGGGTTTATAAAACAAAACTAAATCTGGATGGTTCAGTGCAGAAAAACAAAGCACGGTTGGTTGCAAAGGGGTACTCTCAGAAGCCTGGAATCGATTTCAATGAAACTTTTGCACCTGTGGCAAGACTTGATACTGTGAGAACCTTGGTGGCCCTTGCTGCACAGAAAGGATGGAAATTATTTCAGTTAGATGTAAAGTCTGCATTTCTAAATGGAGTGTTGAATGAAGAGGTGTATGTGGATCAACCATCTGGTTTTGTTATACAGGGCAAGGAAGACAAAGTGTACAGGCTCAGGAAAGCTTTATATGGTTTGAAACAAGCTCCAAGAGCTTGGTATGAAGAAATAAATTCCTATTTTGCAAAGGCTGGATTCCACAGAAGTCCGAGTGAAGCTACTCTTTATATCAAGACATCTCACAGTGGCATTCTTATTGTGTCACTGTATGTAGATGATATTATTTACACAGGGAGTTCAAAGGAGATGATAGCTGAGTTTAAAGGTGAGATGATGAGACAATATGAGATGACTGATCTAGGATTACTTCACCATTTCCTTGGTCTTGGAGTATTGCAAACAGATAATTACATCTTCTTGCATCAAAAGAAATATGCAAAGACTTTGCTTGAGAAATTTGGACTTAGGGATTGTAAGCCGGTTGCAACACCATTAGCTATGAATGAAAAACTTACAAAAGTAGATGGAAGTGATCTGGCAGATGAGACTTTATATAGACAAATGGTGGGAAGTTTGCTATATTTGACAGCAACAAGGCCAGATATTATGTTTGCAGCAAGCTTATTGGCTAGGTTTATGCACAATCCTACCAAGAAGCATATGGGGATAGCTAAGAGAGTTCTGAGATACATACAAGGCACTGTGACCTATGGAGTTGTCTATGAAAAGGGAAAAGGAGCAGTGTTGGTTGGTTATTGTGATAGTGATTGGAGTGGAAGTGAAGATGATATGAGGAGTACATCTGGCTATGCATTCAATCTTGGTTCTGGTGTGTTTTCTTGGGCCTCAATCAAACAAAGCAGTGTTGCTCTTTCAACTGCAGAGGCAGAGTACATCAGTGCAGCAGAAGCTACTGCACAAGCCATTTGGCTAAGATTTGTACTCTCTGATTTCGGGGAAGAACAAGCAGAACCAACTAAGTTGTTGTGTGATAATACCTCAGCAATTGCCATATCAAAGAATCCAGTTCATCATCACAAAACCAAGCACATTAATCGGAAATTTCATTTCATCCGAGATGCACTTCAAGATGGTGAGATTGATCTGGTATACTGCAAGACTGAAGAGCAGGTTGCAGATATATTCACTAAAGCTTTGGCAAGGGATCGATTTGAAGTACTGAGGACAGCTTTGGGAGTGATTTCAGCACATCACTTAGAAGGGAGTGTTAGTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4219 RVT_2 Retrotran_gag_2 gag_pre-integrs rve zf-CCHC

Protein Analysis

713

Amino Acids

80.47

Weight (kDa)

6.38

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_retrovirus PF25597 54 - 117 8.9e-26 Retroviral polymerase SH3-like domain
RVT_2 PF07727 223 - 465 3.7e-83 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 732, 2137
Acc36I ACCTGC 1 cut(s) 2020
AccB7I CCANNNNNTGG 1 cut(s) 713
AccI GTMKAC 1 cut(s) 2010
AclWI GGATC 3 cut(s) 687, 972, 2073
AcsI RAATTY 4 cut(s) 26, 1072, 1355, 1961
AcuI CTGAAG 1 cut(s) 2043
AdeI CACNNNGTG 1 cut(s) 437
AfaI GTAC 8 cut(s) 59, 539, 797, 1010, 1699, 1793, 1842, 2079
AfiI CCNNNNNNNGG 1 cut(s) 713
AjnI CCWGG 2 cut(s) 130, 808
AjuI GAANNNNNNNTTGG 2 cut(s) 441, 473
Alw26I GTCTC 3 cut(s) 187, 1231, 1439
AlwI GGATC 3 cut(s) 687, 972, 2073
AoxI GGCC 3 cut(s) 873, 1496, 1743
ApeKI GCWGC 4 cut(s) 608, 881, 1514, 1802
ApoI RAATTY 4 cut(s) 26, 1072, 1355, 1961
AseI ATTAAT 1 cut(s) 1953
AspS9I GGNCC 2 cut(s) 874, 1743
AsuHPI GGTGA 4 cut(s) 301, 1238, 1262, 2006
BbsI GAAGAC 2 cut(s) 104, 1005
BbvCI CCTCAGC 2 cut(s) 36, 1900
BbvI GCAGC 4 cut(s) 595, 868, 1526, 1814
BccI CCATC 5 cut(s) 746, 888, 979, 1418, 1985
BcgI CGANNNNNNTGC 2 cut(s) 1937, 1971
BciT130I CCWGG 2 cut(s) 132, 810
BciVI GTATCC 1 cut(s) 377
BclI TGATCA 2 cut(s) 487, 520
BcoDI GTCTC 3 cut(s) 187, 1231, 1439
BfaI CTAG 2 cut(s) 1259, 1530
BfmI CTRYAG 2 cut(s) 387, 1779
BfuAI ACCTGC 1 cut(s) 2020
BfuI GTATCC 1 cut(s) 377
BisI GCNGC 4 cut(s) 609, 882, 1515, 1803
BlsI GCNGC 4 cut(s) 610, 883, 1516, 1804
BmcAI AGTACT 1 cut(s) 2079
Bme1390I CCNGG 2 cut(s) 132, 810
BmgT120I GGNCC 2 cut(s) 874, 1743
BmiI GGNNCC 1 cut(s) 18
BmrFI CCNGG 2 cut(s) 132, 810
BmsI GCATC 4 cut(s) 62, 151, 1330, 1969
BpiI GAAGAC 2 cut(s) 104, 1005
Bpu10I CCTNAGC 3 cut(s) 36, 1016, 1900
BpuEI CTTGAG 2 cut(s) 518, 1370
Bsa29I ATCGAT 3 cut(s) 70, 816, 2068
BsaBI GATNNNNATC 1 cut(s) 519
BsaJI CCNNGG 3 cut(s) 612, 867, 1279
BsaXI ACNNNNNCTCC 3 cut(s) 1663, 1693, 2116
Bsc4I CCNNNNNNNGG 1 cut(s) 713
Bse118I RCCGGY 1 cut(s) 1378
Bse1I ACTGG 1 cut(s) 1925
Bse3DI GCAATG 1 cut(s) 546
Bse8I GATNNNNATC 1 cut(s) 519
BseBI CCWGG 2 cut(s) 132, 810
BseCI ATCGAT 3 cut(s) 70, 816, 2068
BseDI CCNNGG 3 cut(s) 612, 867, 1279
BseGI GGATG 4 cut(s) 622, 757, 899, 1971
BseJI GATNNNNATC 1 cut(s) 519
BseLI CCNNNNNNNGG 1 cut(s) 713
BseMI GCAATG 1 cut(s) 546
BseMII CTCAG 8 cut(s) 27, 468, 815, 1030, 1206, 1574, 1914, 2072
BseNI ACTGG 1 cut(s) 1925
BseRI GAGGAG 2 cut(s) 519, 1708
BseXI GCAGC 4 cut(s) 595, 868, 1526, 1814
BsgI GTGCAG 4 cut(s) 782, 867, 1800, 1821
BshFI GGCC 3 cut(s) 875, 1498, 1745
BshVI ATCGAT 3 cut(s) 70, 816, 2068
BsiSI CCGG 1 cut(s) 1379
BslI CCNNNNNNNGG 1 cut(s) 713
BsmAI GTCTC 3 cut(s) 187, 1231, 1439
BsmI GAATGC 3 cut(s) 346, 1149, 1712
BsnI GGCC 3 cut(s) 875, 1498, 1745
Bsp1407I TGTACA 2 cut(s) 57, 1008
Bsp143I GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
BspANI GGCC 3 cut(s) 875, 1498, 1745
BspCNI CTCAG 8 cut(s) 28, 469, 814, 1029, 1207, 1575, 1913, 2073
BspDI ATCGAT 3 cut(s) 70, 816, 2068
BspLI GGNNCC 1 cut(s) 18
BspMAI CTGCAG 2 cut(s) 391, 1783
BspMI ACCTGC 1 cut(s) 2020
BspPI GGATC 3 cut(s) 687, 972, 2073
BspQI GCTCTTC 1 cut(s) 2019
BsrDI GCAATG 1 cut(s) 546
BsrFI RCCGGY 1 cut(s) 1378
BsrGI TGTACA 2 cut(s) 57, 1008
BsrI ACTGG 1 cut(s) 1925
BssAI RCCGGY 1 cut(s) 1378
BssECI CCNNGG 3 cut(s) 612, 867, 1279
BssMI GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
BssNAI GTATAC 1 cut(s) 2011
BssT1I CCWWGG 3 cut(s) 612, 867, 1279
Bst1107I GTATAC 1 cut(s) 2011
Bst2UI CCWGG 2 cut(s) 132, 810
Bst4CI ACNGT 8 cut(s) 119, 267, 404, 780, 859, 1145, 1167, 1603
Bst6I CTCTTC 4 cut(s) 444, 597, 945, 2019
BstAUI TGTACA 2 cut(s) 57, 1008
BstC8I GCNNGC 2 cut(s) 214, 1519
BstF5I GGATG 4 cut(s) 622, 757, 899, 1971
BstKTI GATC 9 cut(s) 375, 490, 523, 682, 967, 1258, 1435, 2005, 2068
BstMAI GTCTC 3 cut(s) 187, 1231, 1439
BstMBI GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
BstMWI GCNNNNNNNGC 4 cut(s) 842, 881, 1052, 1808
BstNI CCWGG 2 cut(s) 132, 810
BstNSI RCATGY 1 cut(s) 330
BstSCI CCNGG 2 cut(s) 130, 808
BstSFI CTRYAG 2 cut(s) 387, 1779
BstV1I GCAGC 4 cut(s) 595, 868, 1526, 1814
BstV2I GAAGAC 2 cut(s) 104, 1005
BstX2I RGATCY 1 cut(s) 679
BstXI CCANNNNNNTGG 2 cut(s) 1056, 1280
BstYI RGATCY 1 cut(s) 679
BstZ17I GTATAC 1 cut(s) 2011
Bsu15I ATCGAT 3 cut(s) 70, 816, 2068
BsuI GTATCC 1 cut(s) 377
BsuRI GGCC 3 cut(s) 875, 1498, 1745
BsuTUI ATCGAT 3 cut(s) 70, 816, 2068
BtsCI GGATG 4 cut(s) 622, 757, 899, 1971
BtsI GCAGTG 2 cut(s) 1647, 1768
BtsIMutI CAGTG 9 cut(s) 124, 451, 765, 1150, 1163, 1599, 1647, 1768, 1804
BveI ACCTGC 1 cut(s) 2020
Cac8I GCNNGC 2 cut(s) 214, 1519
Cfr10I RCCGGY 1 cut(s) 1378
Cfr13I GGNCC 2 cut(s) 874, 1743
ClaI ATCGAT 3 cut(s) 70, 816, 2068
Csp6I GTAC 8 cut(s) 58, 538, 796, 1009, 1698, 1792, 1841, 2078
CviAII CATG 3 cut(s) 176, 327, 624
CviQI GTAC 8 cut(s) 58, 538, 796, 1009, 1698, 1792, 1841, 2078
DpnI GATC 9 cut(s) 374, 489, 522, 681, 966, 1257, 1434, 2004, 2067
DpnII GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
DraI TTTAAA 1 cut(s) 1222
DraIII CACNNNGTG 1 cut(s) 437
Eam1104I CTCTTC 4 cut(s) 444, 597, 945, 2019
EarI CTCTTC 4 cut(s) 444, 597, 945, 2019
Eco130I CCWWGG 3 cut(s) 612, 867, 1279
Eco57I CTGAAG 1 cut(s) 2043
EcoRI GAATTC 1 cut(s) 26
EcoRII CCWGG 2 cut(s) 130, 808
EcoT14I CCWWGG 3 cut(s) 612, 867, 1279
EcoT22I ATGCAT 1 cut(s) 1714
ErhI CCWWGG 3 cut(s) 612, 867, 1279
FaeI CATG 3 cut(s) 179, 330, 627
FalI AAGNNNNNCTT 2 cut(s) 1107, 1139
FatI CATG 3 cut(s) 175, 326, 623
FauNDI CATATG 1 cut(s) 1560
FbaI TGATCA 2 cut(s) 487, 520
FblI GTMKAC 1 cut(s) 2010
Fnu4HI GCNGC 4 cut(s) 609, 882, 1515, 1803
FokI GGATG 4 cut(s) 629, 764, 906, 1958
Fsp4HI GCNGC 4 cut(s) 609, 882, 1515, 1803
FspBI CTAG 2 cut(s) 1259, 1530
GluI GCNGC 4 cut(s) 609, 882, 1515, 1803
HaeIII GGCC 3 cut(s) 875, 1498, 1745
HapII CCGG 1 cut(s) 1379
Hin1II CATG 3 cut(s) 179, 330, 627
HincII GTYRAC 1 cut(s) 188
HindII GTYRAC 1 cut(s) 188
HindIII AAGCTT 4 cut(s) 111, 1023, 1519, 2052
HinfI GANTC 9 cut(s) 67, 278, 422, 620, 667, 717, 813, 1095, 1921
HpaII CCGG 1 cut(s) 1379
HphI GGTGA 4 cut(s) 301, 1238, 1262, 2006
Hpy166II GTNNAC 5 cut(s) 58, 188, 509, 1009, 2011
Hpy188III TCNNGA 8 cut(s) 282, 300, 370, 491, 749, 1018, 1132, 1988
Hpy8I GTNNAC 5 cut(s) 58, 188, 509, 1009, 2011
HpyAV CCTTC 7 cut(s) 7, 247, 343, 351, 401, 625, 2114
HpyCH4III ACNGT 8 cut(s) 119, 267, 404, 780, 859, 1145, 1167, 1603
HpyF10VI GCNNNNNNNGC 4 cut(s) 842, 881, 1052, 1808
Hsp92II CATG 3 cut(s) 179, 330, 627
Ksp22I TGATCA 2 cut(s) 487, 520
Kzo9I GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
LguI GCTCTTC 1 cut(s) 2019
LmnI GCTCC 2 cut(s) 1051, 1637
Lsp1109I GCAGC 4 cut(s) 595, 868, 1526, 1814
LweI GCATC 4 cut(s) 62, 151, 1330, 1969
MaeI CTAG 2 cut(s) 1259, 1530
MaeIII GTNAC 5 cut(s) 289, 472, 499, 1161, 1603
MalI GATC 9 cut(s) 374, 489, 522, 681, 966, 1257, 1434, 2004, 2067
MboI GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
MfeI CAATTG 1 cut(s) 1905
MflI RGATCY 1 cut(s) 679
MluCI AATT 8 cut(s) 26, 135, 899, 1072, 1306, 1355, 1905, 1961
MlyI GAGTC 1 cut(s) 726
Mph1103I ATGCAT 1 cut(s) 1714
MseI TTAA 4 cut(s) 138, 315, 1221, 1953
MslI CAYNNNNRTG 1 cut(s) 380
MspI CCGG 1 cut(s) 1379
MspR9I CCNGG 2 cut(s) 132, 810
MunI CAATTG 1 cut(s) 1905
Mva1269I GAATGC 3 cut(s) 346, 1149, 1712
MvaI CCWGG 2 cut(s) 132, 810
MwoI GCNNNNNNNGC 4 cut(s) 842, 881, 1052, 1808
NdeI CATATG 1 cut(s) 1560
NdeII GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
NlaIII CATG 3 cut(s) 179, 330, 627
NlaIV GGNNCC 1 cut(s) 18
NmuCI GTSAC 4 cut(s) 289, 499, 1161, 1603
NsiI ATGCAT 1 cut(s) 1714
NspI RCATGY 1 cut(s) 330
PciSI GCTCTTC 1 cut(s) 2019
PctI GAATGC 3 cut(s) 346, 1149, 1712
PfeI GAWTC 8 cut(s) 67, 278, 422, 620, 667, 813, 1095, 1921
PflMI CCANNNNNTGG 1 cut(s) 713
PkrI GCNGC 4 cut(s) 610, 883, 1516, 1804
PleI GAGTC 1 cut(s) 725
PpsI GAGTC 1 cut(s) 725
PshBI ATTAAT 1 cut(s) 1953
PsiI TTATAA 2 cut(s) 732, 2137
Psp6I CCWGG 2 cut(s) 130, 808
PspGI CCWGG 2 cut(s) 130, 808
PspN4I GGNNCC 1 cut(s) 18
PspPI GGNCC 2 cut(s) 874, 1743
PstI CTGCAG 2 cut(s) 391, 1783
PsuI RGATCY 1 cut(s) 679
RsaI GTAC 8 cut(s) 59, 539, 797, 1010, 1699, 1793, 1842, 2079
RsaNI GTAC 8 cut(s) 58, 538, 796, 1009, 1698, 1792, 1841, 2078
RseI CAYNNNNRTG 1 cut(s) 380
SapI GCTCTTC 1 cut(s) 2019
SaqAI TTAA 4 cut(s) 138, 315, 1221, 1953
SatI GCNGC 4 cut(s) 609, 882, 1515, 1803
Sau3AI GATC 9 cut(s) 372, 487, 520, 679, 964, 1255, 1432, 2002, 2065
Sau96I GGNCC 2 cut(s) 874, 1743
ScaI AGTACT 1 cut(s) 2079
SchI GAGTC 1 cut(s) 726
ScrFI CCNGG 2 cut(s) 132, 810
SfaNI GCATC 4 cut(s) 62, 151, 1330, 1969
SfcI CTRYAG 2 cut(s) 387, 1779
SmiMI CAYNNNNRTG 1 cut(s) 380
SmlI CTYRAG 2 cut(s) 533, 1349
SmoI CTYRAG 2 cut(s) 533, 1349
Sse9I AATT 8 cut(s) 26, 135, 899, 1072, 1306, 1355, 1905, 1961
SspMI CTAG 2 cut(s) 1259, 1530
StyD4I CCNGG 2 cut(s) 130, 808
StyI CCWWGG 3 cut(s) 612, 867, 1279
TaaI ACNGT 8 cut(s) 119, 267, 404, 780, 859, 1145, 1167, 1603
TaqI TCGA 4 cut(s) 70, 204, 816, 2068
TasI AATT 8 cut(s) 26, 135, 899, 1072, 1306, 1355, 1905, 1961
TatI WGTACW 7 cut(s) 57, 537, 1008, 1697, 1791, 1840, 2077
TfiI GAWTC 8 cut(s) 67, 278, 422, 620, 667, 813, 1095, 1921
Tru1I TTAA 4 cut(s) 138, 315, 1221, 1953
Tru9I TTAA 4 cut(s) 138, 315, 1221, 1953
TscAI CASTG 9 cut(s) 124, 451, 765, 1150, 1170, 1606, 1647, 1768, 1804
TseFI GTSAC 4 cut(s) 289, 499, 1161, 1603
TseI GCWGC 4 cut(s) 608, 881, 1514, 1802
Tsp45I GTSAC 4 cut(s) 289, 499, 1161, 1603
TspRI CASTG 9 cut(s) 124, 451, 765, 1150, 1170, 1606, 1647, 1768, 1804
Van91I CCANNNNNTGG 1 cut(s) 713
VspI ATTAAT 1 cut(s) 1953
XapI RAATTY 4 cut(s) 26, 1072, 1355, 1961
XceI RCATGY 1 cut(s) 330
XcmI CCANNNNNNNNNTGG 2 cut(s) 27, 1558
XmiI GTMKAC 1 cut(s) 2010
XspI CTAG 2 cut(s) 1259, 1530
ZrmI AGTACT 1 cut(s) 2079
Zsp2I ATGCAT 1 cut(s) 1714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.