RchiOBHm_Chr5g0063381

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000154
Physical Location & Seq
Reverse (-)
69122130 .. 69123416
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33949

Sequence Viewer

Length: 1278 bp
ATGGACACAGTGAGAATCATTCTTGCTCTCGCTGCTCACAAGAGTTGGAAGGTGTATCAACTTGATGTCAAATCAGCATTCTTGCATGGTGAATTGATGGAGGATGTGTATGTCGAGCAGCCGAAAGGTTTTGAGAAGAAGGAGGAGCTCAACAAAGTTTATAAGCTAAGAAAAGCCTTATATGGACTAAAACAAGCCCCTCGAGCTTGGTTTAGTCGCATTGAGGCCTATTTCTTAAGGGAGGGATTTGAGAAATGTCCTAGTGAGCAGACACTTTTTGTCAAGACAAACAATCGAGGTAAACTGTTGATCGTAAGTTTGTATGTTGATGATTTAATTTACACTGGGAATGATGATGCAATGATGAGGGAGTTCAAGGATTCAATGATGAAAGAGTTTGACATGTCAGACTTAGGGAAAATGAGATACTTTCTCGGATTAGAAGTGCAACAATTGCAGGATGGGATCTTTATCAGCCAAAAGAAGTATGCAATGGATGTGCTTAGGAGGTTTGGGATGGAAAAGAGCAATGCAGTACTGAATCCTATAGTTCCAGGGTTCAAGATTTCGAAAGATGAGAGCGGGATTGAGGTAGATGGGACGTTCTATAAGCAGCTTGTTGGGAGTCTAATGTACTTAACTTCTACTCGTCCAGACTTGATGTATGCAGTAAGTTTGATTGCTAGATACATGTCTCAACCTACTGAACTTCATCTTATGGCTGCAAAAAGGGTATTAAGATATGTGAAAGGGACCGTTGGCTTTGGTATTCTGTATAAGAAGGAGGCAAGTGGTGTTTTGACAGCGTACACCGATAGTGATTATGCGGGGTGTTTGGAGGACAGGAAGAGCACTTCGGGGTATGCATTCATGATGAGCTCGGGGGCGGTGGCTTGGTCATCTAGGAAGCAACCGATTGTAACTTTATCTACAACAGAGGCTGAGTTTGTGGCTGCTGCAGCGTGTGCTTGTCAAGCAATATGGATGAAAAGGGTACTTAAAATGCTTGGCTGTGAAGGTGATAAGTGTACAACTGTTTTCTGTGACAATAGCTCAACAATCAAATTGTCCAAAAATCCAGTGATGCATGGAAGAAGCAAGCATATTGGAGTACGTTTTCATTTCTTAAGAGATTTGTCCAAGGAAGGAGTGGTGCAGCTAGTTCATTGTGGTTCACAGGAGCAAATTGCTGATGTTCTGACGAAGCCATTAAAGCTGGAGCAGTTTCAAAAGCTTCGAGGTCTCTTGGGAGTGTGTGAGTCACCAAAAGTAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4219 RVT_2 Retrotran_gag_2 gag_pre-integrs rve zf-CCHC

Protein Analysis

425

Amino Acids

48.09

Weight (kDa)

9.08

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 2 - 184 2.1e-58 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 162
AccBSI CCGCTC 1 cut(s) 582
AciI CCGC 3 cut(s) 582, 827, 887
AclWI GGATC 1 cut(s) 473
AfaI GTAC 6 cut(s) 537, 635, 809, 996, 1030, 1113
AflII CTTAAG 2 cut(s) 235, 1126
AflIII ACRYGT 2 cut(s) 402, 690
AgsI TTSAA 4 cut(s) 376, 384, 562, 1229
AjnI CCWGG 1 cut(s) 553
AluBI AGCT 9 cut(s) 148, 166, 206, 616, 879, 1053, 1159, 1216, 1234
AluI AGCT 9 cut(s) 148, 166, 206, 616, 879, 1053, 1159, 1216, 1234
Alw21I GWGCWC 3 cut(s) 150, 854, 881
Alw26I GTCTC 2 cut(s) 699, 1247
AlwI GGATC 1 cut(s) 473
AlwNI CAGNNNCTG 1 cut(s) 941
Ama87I CYCGRG 2 cut(s) 201, 880
AoxI GGCC 1 cut(s) 225
ApeKI GCWGC 8 cut(s) 32, 118, 613, 722, 953, 956, 959, 1156
AspS9I GGNCC 1 cut(s) 753
AsuHPI GGTGA 3 cut(s) 101, 1031, 1254
AsuII TTCGAA 1 cut(s) 569
AvaI CYCGRG 2 cut(s) 201, 880
AvaII GGWCC 1 cut(s) 753
BanII GRGCYC 2 cut(s) 150, 881
Bbv12I GWGCWC 3 cut(s) 150, 854, 881
BbvI GCAGC 8 cut(s) 19, 130, 625, 709, 940, 943, 971, 1168
BccI CCATC 4 cut(s) 91, 455, 511, 590
BciT130I CCWGG 1 cut(s) 555
BcoDI GTCTC 2 cut(s) 699, 1247
BfaI CTAG 4 cut(s) 261, 684, 903, 1160
BfmI CTRYAG 2 cut(s) 546, 957
BfrI CTTAAG 2 cut(s) 235, 1126
BisI GCNGC 8 cut(s) 33, 119, 614, 723, 954, 957, 960, 1157
BlsI GCNGC 8 cut(s) 34, 120, 615, 724, 955, 958, 961, 1158
BmcAI AGTACT 1 cut(s) 537
Bme1390I CCNGG 1 cut(s) 555
Bme18I GGWCC 1 cut(s) 753
BmeT110I CYCGRG 2 cut(s) 201, 880
BmgT120I GGNCC 1 cut(s) 753
BmiI GGNNCC 1 cut(s) 754
BmrFI CCNGG 1 cut(s) 555
BmrI ACTGGG 1 cut(s) 354
BmsI GCATC 2 cut(s) 346, 1074
BmuI ACTGGG 1 cut(s) 354
BpmI CTGGAG 1 cut(s) 1238
Bpu10I CCTNAGC 1 cut(s) 503
Bpu14I TTCGAA 1 cut(s) 569
BsaBI GATNNNNATC 1 cut(s) 470
BsaI GGTCTC 1 cut(s) 1247
BsaJI CCNNGG 2 cut(s) 554, 1140
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bse1I ACTGG 2 cut(s) 349, 1079
Bse3DI GCAATG 3 cut(s) 366, 498, 535
Bse8I GATNNNNATC 1 cut(s) 470
BseBI CCWGG 1 cut(s) 555
BseDI CCNNGG 2 cut(s) 554, 1140
BseGI GGATG 5 cut(s) 109, 466, 502, 522, 990
BseJI GATNNNNATC 1 cut(s) 470
BseMI GCAATG 3 cut(s) 366, 498, 535
BseMII CTCAG 1 cut(s) 933
BseNI ACTGG 2 cut(s) 349, 1079
BseRI GAGGAG 1 cut(s) 158
BseXI GCAGC 8 cut(s) 19, 130, 625, 709, 940, 943, 971, 1168
BsgI GTGCAG 1 cut(s) 1175
BshFI GGCC 1 cut(s) 227
BsiHKAI GWGCWC 3 cut(s) 150, 854, 881
BsiHKCI CYCGRG 2 cut(s) 201, 880
BslFI GGGAC 2 cut(s) 613, 766
BsmAI GTCTC 2 cut(s) 699, 1247
BsmFI GGGAC 2 cut(s) 613, 766
BsmI GAATGC 2 cut(s) 77, 866
BsnI GGCC 1 cut(s) 227
Bso31I GGTCTC 1 cut(s) 1247
BsoBI CYCGRG 2 cut(s) 201, 880
Bsp119I TTCGAA 1 cut(s) 569
Bsp1286I GDGCHC 3 cut(s) 150, 854, 881
Bsp1407I TGTACA 1 cut(s) 1028
Bsp143I GATC 2 cut(s) 309, 465
BspACI CCGC 3 cut(s) 582, 827, 887
BspANI GGCC 1 cut(s) 227
BspCNI CTCAG 1 cut(s) 934
BspHI TCATGA 1 cut(s) 870
BspLI GGNNCC 1 cut(s) 754
BspMAI CTGCAG 1 cut(s) 961
BspPI GGATC 1 cut(s) 473
BspQI GCTCTTC 1 cut(s) 842
BspT104I TTCGAA 1 cut(s) 569
BspTI CTTAAG 2 cut(s) 235, 1126
BspTNI GGTCTC 1 cut(s) 1247
BsrBI CCGCTC 1 cut(s) 582
BsrDI GCAATG 3 cut(s) 366, 498, 535
BsrGI TGTACA 1 cut(s) 1028
BsrI ACTGG 2 cut(s) 349, 1079
BssECI CCNNGG 2 cut(s) 554, 1140
BssMI GATC 2 cut(s) 309, 465
BssT1I CCWWGG 1 cut(s) 1140
Bst2UI CCWGG 1 cut(s) 555
Bst4CI ACNGT 4 cut(s) 10, 306, 757, 1036
Bst6I CTCTTC 1 cut(s) 842
BstAFI CTTAAG 2 cut(s) 235, 1126
BstAPI GCANNNNNTGC 2 cut(s) 454, 965
BstAUI TGTACA 1 cut(s) 1028
BstBI TTCGAA 1 cut(s) 569
BstC8I GCNNGC 1 cut(s) 1100
BstDEI CTNAG 4 cut(s) 167, 412, 503, 942
BstF5I GGATG 5 cut(s) 109, 466, 502, 522, 990
BstKTI GATC 2 cut(s) 312, 468
BstMAI GTCTC 2 cut(s) 699, 1247
BstMBI GATC 2 cut(s) 309, 465
BstMWI GCNNNNNNNGC 7 cut(s) 32, 203, 454, 959, 965, 974, 1213
BstNI CCWGG 1 cut(s) 555
BstNSI RCATGY 2 cut(s) 406, 694
BstSCI CCNGG 1 cut(s) 553
BstSFI CTRYAG 2 cut(s) 546, 957
BstV1I GCAGC 8 cut(s) 19, 130, 625, 709, 940, 943, 971, 1168
BstX2I RGATCY 1 cut(s) 465
BstYI RGATCY 1 cut(s) 465
BsuRI GGCC 1 cut(s) 227
BtsCI GGATG 5 cut(s) 109, 466, 502, 522, 990
BtsIMutI CAGTG 3 cut(s) 15, 342, 1086
Cac8I GCNNGC 1 cut(s) 1100
CaiI CAGNNNCTG 1 cut(s) 941
CciI TCATGA 1 cut(s) 870
Cfr13I GGNCC 1 cut(s) 753
Csp6I GTAC 6 cut(s) 536, 634, 808, 995, 1029, 1112
CviAII CATG 5 cut(s) 86, 403, 691, 871, 1088
CviQI GTAC 6 cut(s) 536, 634, 808, 995, 1029, 1112
DdeI CTNAG 4 cut(s) 167, 412, 503, 942
DpnI GATC 2 cut(s) 311, 467
DpnII GATC 2 cut(s) 309, 465
Eam1104I CTCTTC 1 cut(s) 842
EarI CTCTTC 1 cut(s) 842
Ecl136II GAGCTC 2 cut(s) 148, 879
Eco130I CCWWGG 1 cut(s) 1140
Eco147I AGGCCT 1 cut(s) 227
Eco24I GRGCYC 2 cut(s) 150, 881
Eco31I GGTCTC 1 cut(s) 1247
Eco47I GGWCC 1 cut(s) 753
Eco53kI GAGCTC 2 cut(s) 148, 879
Eco88I CYCGRG 2 cut(s) 201, 880
EcoICRI GAGCTC 2 cut(s) 148, 879
EcoRII CCWGG 1 cut(s) 553
EcoT14I CCWWGG 1 cut(s) 1140
EcoT22I ATGCAT 2 cut(s) 868, 1089
EcoT38I GRGCYC 2 cut(s) 150, 881
ErhI CCWWGG 1 cut(s) 1140
FaeI CATG 5 cut(s) 89, 406, 694, 874, 1091
FaqI GGGAC 2 cut(s) 613, 766
FatI CATG 5 cut(s) 85, 402, 690, 870, 1087
FauI CCCGC 2 cut(s) 575, 820
Fnu4HI GCNGC 8 cut(s) 33, 119, 614, 723, 954, 957, 960, 1157
FokI GGATG 5 cut(s) 116, 473, 509, 529, 997
FriOI GRGCYC 2 cut(s) 150, 881
Fsp4HI GCNGC 8 cut(s) 33, 119, 614, 723, 954, 957, 960, 1157
FspBI CTAG 4 cut(s) 261, 684, 903, 1160
GluI GCNGC 8 cut(s) 33, 119, 614, 723, 954, 957, 960, 1157
GsuI CTGGAG 1 cut(s) 1238
HaeIII GGCC 1 cut(s) 227
Hin1II CATG 5 cut(s) 89, 406, 694, 874, 1091
HindIII AAGCTT 1 cut(s) 1232
HinfI GANTC 5 cut(s) 15, 380, 541, 625, 1259
HphI GGTGA 3 cut(s) 101, 1031, 1254
Hpy166II GTNNAC 5 cut(s) 302, 810, 1029, 1175, 1273
Hpy188I TCNGA 3 cut(s) 409, 437, 1200
Hpy188III TCNNGA 4 cut(s) 283, 562, 653, 871
Hpy8I GTNNAC 5 cut(s) 302, 810, 1029, 1175, 1273
HpyAV CCTTC 5 cut(s) 43, 133, 775, 1010, 1139
HpyCH4III ACNGT 4 cut(s) 10, 306, 757, 1036
HpyCH4IV ACGT 2 cut(s) 602, 1114
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 203, 454, 959, 965, 974, 1213
HpyF3I CTNAG 4 cut(s) 167, 412, 503, 942
HpySE526I ACGT 2 cut(s) 602, 1114
Hsp92II CATG 5 cut(s) 89, 406, 694, 874, 1091
Kzo9I GATC 2 cut(s) 309, 465
LguI GCTCTTC 1 cut(s) 842
LmnI GCTCC 3 cut(s) 145, 1180, 1219
LpnPI CCDG 9 cut(s) 330, 443, 540, 567, 666, 829, 1092, 1163, 1202
Lsp1109I GCAGC 8 cut(s) 19, 130, 625, 709, 940, 943, 971, 1168
LweI GCATC 2 cut(s) 346, 1074
MaeI CTAG 4 cut(s) 261, 684, 903, 1160
MaeII ACGT 2 cut(s) 602, 1114
MaeIII GTNAC 3 cut(s) 919, 1043, 1260
MalI GATC 2 cut(s) 311, 467
MbiI CCGCTC 1 cut(s) 582
MboI GATC 2 cut(s) 309, 465
MboII GAAGA 3 cut(s) 148, 859, 1104
MfeI CAATTG 1 cut(s) 452
MflI RGATCY 1 cut(s) 465
MhlI GDGCHC 3 cut(s) 150, 854, 881
MluCI AATT 5 cut(s) 92, 336, 452, 1064, 1185
MlyI GAGTC 2 cut(s) 634, 1268
MmeI TCCRAC 1 cut(s) 26
Mph1103I ATGCAT 2 cut(s) 868, 1089
MseI TTAA 7 cut(s) 236, 335, 638, 737, 999, 1127, 1211
MspCI CTTAAG 2 cut(s) 235, 1126
MspR9I CCNGG 1 cut(s) 555
MunI CAATTG 1 cut(s) 452
Mva1269I GAATGC 2 cut(s) 77, 866
MvaI CCWGG 1 cut(s) 555
MwoI GCNNNNNNNGC 7 cut(s) 32, 203, 454, 959, 965, 974, 1213
NdeII GATC 2 cut(s) 309, 465
NlaIII CATG 5 cut(s) 89, 406, 694, 874, 1091
NlaIV GGNNCC 1 cut(s) 754
NmuCI GTSAC 2 cut(s) 1043, 1260
NsiI ATGCAT 2 cut(s) 868, 1089
NspI RCATGY 2 cut(s) 406, 694
NspV TTCGAA 1 cut(s) 569
PaeR7I CTCGAG 1 cut(s) 201
PagI TCATGA 1 cut(s) 870
PceI AGGCCT 1 cut(s) 227
PciI ACATGT 2 cut(s) 402, 690
PciSI GCTCTTC 1 cut(s) 842
PctI GAATGC 2 cut(s) 77, 866
PfeI GAWTC 3 cut(s) 15, 380, 541
PkrI GCNGC 8 cut(s) 34, 120, 615, 724, 955, 958, 961, 1158
PleI GAGTC 2 cut(s) 633, 1267
PpsI GAGTC 2 cut(s) 633, 1267
PscI ACATGT 2 cut(s) 402, 690
PsiI TTATAA 1 cut(s) 162
Psp124BI GAGCTC 2 cut(s) 150, 881
Psp6I CCWGG 1 cut(s) 553
PspGI CCWGG 1 cut(s) 553
PspN4I GGNNCC 1 cut(s) 754
PspPI GGNCC 1 cut(s) 753
PspXI VCTCGAGB 1 cut(s) 201
PstI CTGCAG 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 941
PsuI RGATCY 1 cut(s) 465
RsaI GTAC 6 cut(s) 537, 635, 809, 996, 1030, 1113
RsaNI GTAC 6 cut(s) 536, 634, 808, 995, 1029, 1112
SacI GAGCTC 2 cut(s) 150, 881
SapI GCTCTTC 1 cut(s) 842
SaqAI TTAA 7 cut(s) 236, 335, 638, 737, 999, 1127, 1211
SatI GCNGC 8 cut(s) 33, 119, 614, 723, 954, 957, 960, 1157
Sau3AI GATC 2 cut(s) 309, 465
Sau96I GGNCC 1 cut(s) 753
ScaI AGTACT 1 cut(s) 537
SchI GAGTC 2 cut(s) 634, 1268
ScrFI CCNGG 1 cut(s) 555
SduI GDGCHC 3 cut(s) 150, 854, 881
SfaNI GCATC 2 cut(s) 346, 1074
SfcI CTRYAG 2 cut(s) 546, 957
Sfr274I CTCGAG 1 cut(s) 201
SfuI TTCGAA 1 cut(s) 569
SinI GGWCC 1 cut(s) 753
SlaI CTCGAG 1 cut(s) 201
SmlI CTYRAG 3 cut(s) 201, 235, 1126
SmoI CTYRAG 3 cut(s) 201, 235, 1126
Sse9I AATT 5 cut(s) 92, 336, 452, 1064, 1185
SseBI AGGCCT 1 cut(s) 227
SsiI CCGC 3 cut(s) 582, 827, 887
SspMI CTAG 4 cut(s) 261, 684, 903, 1160
SstI GAGCTC 2 cut(s) 150, 881
StuI AGGCCT 1 cut(s) 227
StyD4I CCNGG 1 cut(s) 553
StyI CCWWGG 1 cut(s) 1140
TaaI ACNGT 4 cut(s) 10, 306, 757, 1036
TaiI ACGT 2 cut(s) 605, 1117
TaqI TCGA 5 cut(s) 114, 202, 295, 569, 1237
TasI AATT 5 cut(s) 92, 336, 452, 1064, 1185
TatI WGTACW 3 cut(s) 535, 633, 1028
TfiI GAWTC 3 cut(s) 15, 380, 541
Tru1I TTAA 7 cut(s) 236, 335, 638, 737, 999, 1127, 1211
Tru9I TTAA 7 cut(s) 236, 335, 638, 737, 999, 1127, 1211
TscAI CASTG 3 cut(s) 15, 349, 1086
TseFI GTSAC 2 cut(s) 1043, 1260
TseI GCWGC 8 cut(s) 32, 118, 613, 722, 953, 956, 959, 1156
Tsp45I GTSAC 2 cut(s) 1043, 1260
TspDTI ATGAA 6 cut(s) 404, 701, 859, 1001, 1109, 1154
TspRI CASTG 3 cut(s) 15, 349, 1086
Vha464I CTTAAG 2 cut(s) 235, 1126
VpaK11BI GGWCC 1 cut(s) 753
XceI RCATGY 2 cut(s) 406, 694
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XhoI CTCGAG 1 cut(s) 201
XspI CTAG 4 cut(s) 261, 684, 903, 1160
ZrmI AGTACT 1 cut(s) 537
Zsp2I ATGCAT 2 cut(s) 868, 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.