Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 24 - 202 | 3.5e-26 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 296 - 374 | 3.8e-24 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 405 - 470 | 1.2e-12 | GAG-pre-integrase domain |
| rve | PF00665 | 488 - 585 | 1.2e-14 | Integrase core domain |
| RVT_2 | PF07727 | 825 - 925 | 1.7e-34 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RVT_2 | PF07727 | 946 - 1012 | 3.7e-14 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2495 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 137, 946 |
| AccI | GTMKAC | 1 cut(s) | 2493 |
| AciI | CCGC | 4 cut(s) | 433, 1759, 1856, 2460 |
| AclWI | GGATC | 8 cut(s) | 1412, 1425, 1803, 2058, 2387, 3211, 3224, 3342 |
| AcoI | YGGCCR | 1 cut(s) | 1847 |
| AcsI | RAATTY | 4 cut(s) | 76, 353, 1276, 1679 |
| AcuI | CTGAAG | 3 cut(s) | 2220, 2946, 3306 |
| AdeI | CACNNNGTG | 1 cut(s) | 202 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 137, 946, 1172, 2339, 3287 |
| AflII | CTTAAG | 1 cut(s) | 1078 |
| AflIII | ACRYGT | 2 cut(s) | 504, 967 |
| AhlI | ACTAGT | 1 cut(s) | 1465 |
| AjiI | CACGTC | 1 cut(s) | 267 |
| AjnI | CCWGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1196, 1228 |
| AleI | CACNNNNGTG | 4 cut(s) | 60, 509, 578, 918 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 104, 136, 872, 904 |
| Alw21I | GWGCWC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| Alw26I | GTCTC | 3 cut(s) | 678, 1181, 3164 |
| AlwI | GGATC | 8 cut(s) | 1412, 1425, 1803, 2058, 2387, 3211, 3224, 3342 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2425, 3434 |
| Ama87I | CYCGRG | 1 cut(s) | 3653 |
| AoxI | GGCC | 4 cut(s) | 667, 1174, 1847, 3234 |
| ApeKI | GCWGC | 7 cut(s) | 2387, 2678, 2687, 3206, 3446, 3449, 3752 |
| ApoI | RAATTY | 4 cut(s) | 76, 353, 1276, 1679 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1002, 1034 |
| AseI | ATTAAT | 1 cut(s) | 1032 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 119 |
| AspLEI | GCGC | 1 cut(s) | 3225 |
| AspS9I | GGNCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| AsuHPI | GGTGA | 5 cut(s) | 392, 935, 1688, 2105, 2147 |
| AsuII | TTCGAA | 1 cut(s) | 2067 |
| AvaI | CYCGRG | 1 cut(s) | 3653 |
| AvaII | GGWCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| BalI | TGGCCA | 1 cut(s) | 1849 |
| BamHI | GGATCC | 2 cut(s) | 1417, 3216 |
| BanII | GRGCYC | 2 cut(s) | 2751, 3374 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3261, 3293 |
| BbsI | GAAGAC | 4 cut(s) | 724, 1328, 1562, 2299 |
| Bbv12I | GWGCWC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| BbvCI | CCTCAGC | 1 cut(s) | 1755 |
| BbvI | GCAGC | 7 cut(s) | 2374, 2690, 2699, 3218, 3436, 3458, 3739 |
| BccI | CCATC | 8 cut(s) | 940, 991, 1170, 2041, 2141, 2650, 2995, 3632 |
| BciT130I | CCWGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| BclI | TGATCA | 3 cut(s) | 952, 3508, 3673 |
| BcoDI | GTCTC | 3 cut(s) | 678, 1181, 3164 |
| BcuI | ACTAGT | 1 cut(s) | 1465 |
| BfaI | CTAG | 5 cut(s) | 1466, 2018, 2717, 3375, 3769 |
| BfmI | CTRYAG | 2 cut(s) | 1689, 3450 |
| BfrI | CTTAAG | 1 cut(s) | 1078 |
| BfuAI | ACCTGC | 1 cut(s) | 2495 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1846 |
| BglII | AGATCT | 2 cut(s) | 326, 1267 |
| BisI | GCNGC | 8 cut(s) | 2388, 2460, 2679, 2688, 3207, 3447, 3450, 3753 |
| BlpI | GCTNAGC | 1 cut(s) | 3050 |
| BlsI | GCNGC | 8 cut(s) | 2389, 2461, 2680, 2689, 3208, 3448, 3451, 3754 |
| BmcAI | AGTACT | 1 cut(s) | 1261 |
| Bme1390I | CCNGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| Bme18I | GGWCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| BmeT110I | CYCGRG | 1 cut(s) | 3653 |
| BmgBI | CACGTC | 1 cut(s) | 267 |
| BmgT120I | GGNCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| BmiI | GGNNCC | 7 cut(s) | 129, 890, 1419, 2251, 2486, 3218, 3643 |
| BmrFI | CCNGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| BmrI | ACTGGG | 1 cut(s) | 2639 |
| BmuI | ACTGGG | 1 cut(s) | 2639 |
| BoxI | GACNNNNGTC | 1 cut(s) | 265 |
| BpiI | GAAGAC | 4 cut(s) | 724, 1328, 1562, 2299 |
| BpmI | CTGGAG | 4 cut(s) | 79, 386, 2104, 2355 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1755, 2287 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3050 |
| Bpu14I | TTCGAA | 1 cut(s) | 2067 |
| BpuEI | CTTGAG | 5 cut(s) | 364, 834, 1248, 2266, 2919 |
| BsaAI | YACGTR | 1 cut(s) | 507 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3012 |
| BsaJI | CCNNGG | 2 cut(s) | 670, 1003 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 104, 134, 359, 389, 2077, 2107, 3060, 3090 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 137, 946, 1172, 2339, 3287 |
| Bse1I | ACTGG | 5 cut(s) | 62, 1490, 2430, 2645, 3572 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3012 |
| BseBI | CCWGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| BseDI | CCNNGG | 2 cut(s) | 670, 1003 |
| BseJI | GATNNNNATC | 1 cut(s) | 3012 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 137, 946, 1172, 2339, 3287 |
| BseNI | ACTGG | 5 cut(s) | 62, 1490, 2430, 2645, 3572 |
| BseRI | GAGGAG | 6 cut(s) | 140, 361, 845, 1686, 1743, 2366 |
| BseXI | GCAGC | 7 cut(s) | 2374, 2690, 2699, 3218, 3436, 3458, 3739 |
| BseYI | CCCAGC | 1 cut(s) | 2088 |
| BshFI | GGCC | 4 cut(s) | 669, 1176, 1849, 3236 |
| BsiHKAI | GWGCWC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3653 |
| BslFI | GGGAC | 5 cut(s) | 296, 1875, 2470, 2914, 3286 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 137, 946, 1172, 2339, 3287 |
| BsmAI | GTCTC | 3 cut(s) | 678, 1181, 3164 |
| BsmFI | GGGAC | 5 cut(s) | 296, 1875, 2470, 2914, 3286 |
| BsmI | GAATGC | 1 cut(s) | 184 |
| BsnI | GGCC | 4 cut(s) | 669, 1176, 1849, 3236 |
| BsoBI | CYCGRG | 1 cut(s) | 3653 |
| Bsp119I | TTCGAA | 1 cut(s) | 2067 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| Bsp1407I | TGTACA | 2 cut(s) | 2416, 3147 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3050 |
| BspACI | CCGC | 4 cut(s) | 433, 1759, 1856, 2460 |
| BspANI | GGCC | 4 cut(s) | 669, 1176, 1849, 3236 |
| BspLI | GGNNCC | 7 cut(s) | 129, 890, 1419, 2251, 2486, 3218, 3643 |
| BspMAI | CTGCAG | 2 cut(s) | 1693, 3454 |
| BspMI | ACCTGC | 1 cut(s) | 2495 |
| BspPI | GGATC | 8 cut(s) | 1412, 1425, 1803, 2058, 2387, 3211, 3224, 3342 |
| BspT104I | TTCGAA | 1 cut(s) | 2067 |
| BspTI | CTTAAG | 1 cut(s) | 1078 |
| BsrGI | TGTACA | 2 cut(s) | 2416, 3147 |
| BsrI | ACTGG | 5 cut(s) | 62, 1490, 2430, 2645, 3572 |
| BssECI | CCNNGG | 2 cut(s) | 670, 1003 |
| Bst2UI | CCWGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| BstAFI | CTTAAG | 1 cut(s) | 1078 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3458 |
| BstAUI | TGTACA | 2 cut(s) | 2416, 3147 |
| BstBAI | YACGTR | 1 cut(s) | 507 |
| BstBI | TTCGAA | 1 cut(s) | 2067 |
| BstC8I | GCNNGC | 4 cut(s) | 1125, 1140, 2818, 3204 |
| BstEII | GGTNACC | 2 cut(s) | 923, 2135 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2337 |
| BstHHI | GCGC | 1 cut(s) | 3225 |
| BstMAI | GTCTC | 3 cut(s) | 678, 1181, 3164 |
| BstNI | CCWGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| BstNSI | RCATGY | 2 cut(s) | 971, 1142 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 265 |
| BstPI | GGTNACC | 2 cut(s) | 923, 2135 |
| BstSCI | CCNGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| BstSFI | CTRYAG | 2 cut(s) | 1689, 3450 |
| BstV1I | GCAGC | 7 cut(s) | 2374, 2690, 2699, 3218, 3436, 3458, 3739 |
| BstV2I | GAAGAC | 4 cut(s) | 724, 1328, 1562, 2299 |
| BstX2I | RGATCY | 4 cut(s) | 326, 1267, 1417, 3216 |
| BstYI | RGATCY | 4 cut(s) | 326, 1267, 1417, 3216 |
| BsuRI | GGCC | 4 cut(s) | 669, 1176, 1849, 3236 |
| BtrI | CACGTC | 1 cut(s) | 267 |
| BtsI | GCAGTG | 2 cut(s) | 1908, 2217 |
| BveI | ACCTGC | 1 cut(s) | 2495 |
| Cac8I | GCNNGC | 4 cut(s) | 1125, 1140, 2818, 3204 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2425, 3434 |
| CfoI | GCGC | 1 cut(s) | 3225 |
| Cfr13I | GGNCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| CseI | GACGC | 1 cut(s) | 270 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 792, 827 |
| DraI | TTTAAA | 1 cut(s) | 2988 |
| DraIII | CACNNNGTG | 1 cut(s) | 202 |
| EaeI | YGGCCR | 1 cut(s) | 1847 |
| Ecl136II | GAGCTC | 2 cut(s) | 2749, 3372 |
| Eco147I | AGGCCT | 1 cut(s) | 1176 |
| Eco24I | GRGCYC | 2 cut(s) | 2751, 3374 |
| Eco47I | GGWCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| Eco53kI | GAGCTC | 2 cut(s) | 2749, 3372 |
| Eco57I | CTGAAG | 3 cut(s) | 2220, 2946, 3306 |
| Eco88I | CYCGRG | 1 cut(s) | 3653 |
| Eco91I | GGTNACC | 2 cut(s) | 923, 2135 |
| EcoICRI | GAGCTC | 2 cut(s) | 2749, 3372 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2337 |
| EcoO65I | GGTNACC | 2 cut(s) | 923, 2135 |
| EcoRI | GAATTC | 1 cut(s) | 1679 |
| EcoRII | CCWGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| EcoT22I | ATGCAT | 3 cut(s) | 1140, 3198, 3582 |
| EcoT38I | GRGCYC | 2 cut(s) | 2751, 3374 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 197, 229, 709, 741, 1879, 1911, 2020, 2052 |
| FaqI | GGGAC | 5 cut(s) | 296, 1875, 2470, 2914, 3286 |
| FbaI | TGATCA | 3 cut(s) | 952, 3508, 3673 |
| FblI | GTMKAC | 1 cut(s) | 2493 |
| Fnu4HI | GCNGC | 8 cut(s) | 2388, 2460, 2679, 2688, 3207, 3447, 3450, 3753 |
| FriOI | GRGCYC | 2 cut(s) | 2751, 3374 |
| Fsp4HI | GCNGC | 8 cut(s) | 2388, 2460, 2679, 2688, 3207, 3447, 3450, 3753 |
| FspBI | CTAG | 5 cut(s) | 1466, 2018, 2717, 3375, 3769 |
| GlaI | GCGC | 1 cut(s) | 3224 |
| GluI | GCNGC | 8 cut(s) | 2388, 2460, 2679, 2688, 3207, 3447, 3450, 3753 |
| GsaI | CCCAGC | 1 cut(s) | 2092 |
| GsuI | CTGGAG | 4 cut(s) | 79, 386, 2104, 2355 |
| HaeIII | GGCC | 4 cut(s) | 669, 1176, 1849, 3236 |
| HgaI | GACGC | 1 cut(s) | 270 |
| HhaI | GCGC | 1 cut(s) | 3225 |
| Hin6I | GCGC | 1 cut(s) | 3223 |
| HinP1I | GCGC | 1 cut(s) | 3223 |
| HincII | GTYRAC | 1 cut(s) | 3079 |
| HindII | GTYRAC | 1 cut(s) | 3079 |
| HindIII | AAGCTT | 8 cut(s) | 1457, 1654, 2818, 2877, 2967, 3047, 3109, 3297 |
| HphI | GGTGA | 5 cut(s) | 392, 935, 1688, 2105, 2147 |
| Hpy188I | TCNGA | 9 cut(s) | 1004, 1588, 1822, 2350, 3045, 3369, 3678, 3723, 3731 |
| Hpy99I | CGWCG | 2 cut(s) | 44, 2771 |
| HpyAV | CCTTC | 9 cut(s) | 7, 860, 1900, 2319, 2333, 2787, 2939, 3263, 3281 |
| HpyCH4IV | ACGT | 4 cut(s) | 266, 506, 882, 2766 |
| HpySE526I | ACGT | 4 cut(s) | 266, 506, 882, 2766 |
| HspAI | GCGC | 1 cut(s) | 3223 |
| Ksp22I | TGATCA | 3 cut(s) | 952, 3508, 3673 |
| LmnI | GCTCC | 9 cut(s) | 127, 659, 814, 2085, 2249, 2384, 2746, 2797, 3625 |
| Lsp1109I | GCAGC | 7 cut(s) | 2374, 2690, 2699, 3218, 3436, 3458, 3739 |
| MaeI | CTAG | 5 cut(s) | 1466, 2018, 2717, 3375, 3769 |
| MaeII | ACGT | 4 cut(s) | 266, 506, 882, 2766 |
| MfeI | CAATTG | 4 cut(s) | 225, 522, 555, 3030 |
| MflI | RGATCY | 4 cut(s) | 326, 1267, 1417, 3216 |
| MhlI | GDGCHC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| MlsI | TGGCCA | 1 cut(s) | 1849 |
| MluNI | TGGCCA | 1 cut(s) | 1849 |
| MlyI | GAGTC | 9 cut(s) | 278, 327, 539, 680, 1026, 1643, 2532, 3092, 3495 |
| MmeI | TCCRAC | 5 cut(s) | 153, 815, 1381, 1397, 3085 |
| Mox20I | TGGCCA | 1 cut(s) | 1849 |
| Mph1103I | ATGCAT | 3 cut(s) | 1140, 3198, 3582 |
| MroXI | GAANNNNTTC | 1 cut(s) | 119 |
| MscI | TGGCCA | 1 cut(s) | 1849 |
| MseI | TTAA | 8 cut(s) | 1032, 1079, 1614, 2550, 2987, 3230, 3555, 3648 |
| MslI | CAYNNNNRTG | 8 cut(s) | 60, 509, 578, 918, 1793, 2037, 2375, 3600 |
| Msp20I | TGGCCA | 1 cut(s) | 1849 |
| MspA1I | CMGCKG | 2 cut(s) | 1759, 3449 |
| MspCI | CTTAAG | 1 cut(s) | 1078 |
| MspR9I | CCNGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| MunI | CAATTG | 4 cut(s) | 225, 522, 555, 3030 |
| Mva1269I | GAATGC | 1 cut(s) | 184 |
| MvaI | CCWGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| NlaIV | GGNNCC | 7 cut(s) | 129, 890, 1419, 2251, 2486, 3218, 3643 |
| NmeAIII | GCCGAG | 1 cut(s) | 695 |
| NmuCI | GTSAC | 7 cut(s) | 770, 923, 1051, 1492, 1955, 2135, 3536 |
| NsiI | ATGCAT | 3 cut(s) | 1140, 3198, 3582 |
| NspI | RCATGY | 2 cut(s) | 971, 1142 |
| NspV | TTCGAA | 1 cut(s) | 2067 |
| OliI | CACNNNNGTG | 4 cut(s) | 60, 509, 578, 918 |
| PaeI | GCATGC | 1 cut(s) | 1142 |
| PaeR7I | CTCGAG | 1 cut(s) | 3653 |
| PceI | AGGCCT | 1 cut(s) | 1176 |
| PciI | ACATGT | 1 cut(s) | 967 |
| PctI | GAATGC | 1 cut(s) | 184 |
| PdmI | GAANNNNTTC | 1 cut(s) | 119 |
| PfeI | GAWTC | 6 cut(s) | 458, 896, 1502, 3252, 3529, 3568 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 137, 946 |
| PfoI | TCCNGGA | 2 cut(s) | 891, 2332 |
| PkrI | GCNGC | 8 cut(s) | 2389, 2461, 2680, 2689, 3208, 3448, 3451, 3754 |
| PleI | GAGTC | 9 cut(s) | 278, 326, 538, 680, 1025, 1642, 2531, 3091, 3494 |
| PpsI | GAGTC | 9 cut(s) | 278, 326, 538, 680, 1025, 1642, 2531, 3091, 3494 |
| Ppu21I | YACGTR | 1 cut(s) | 507 |
| PscI | ACATGT | 1 cut(s) | 967 |
| PshAI | GACNNNNGTC | 1 cut(s) | 265 |
| PshBI | ATTAAT | 1 cut(s) | 1032 |
| Psp124BI | GAGCTC | 2 cut(s) | 2751, 3374 |
| Psp6I | CCWGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| PspEI | GGTNACC | 2 cut(s) | 923, 2135 |
| PspFI | CCCAGC | 1 cut(s) | 2088 |
| PspGI | CCWGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| PspN4I | GGNNCC | 7 cut(s) | 129, 890, 1419, 2251, 2486, 3218, 3643 |
| PspPI | GGNCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| PspXI | VCTCGAGB | 1 cut(s) | 3653 |
| PstI | CTGCAG | 2 cut(s) | 1693, 3454 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2425, 3434 |
| PsuI | RGATCY | 4 cut(s) | 326, 1267, 1417, 3216 |
| PvuII | CAGCTG | 1 cut(s) | 3449 |
| RseI | CAYNNNNRTG | 8 cut(s) | 60, 509, 578, 918, 1793, 2037, 2375, 3600 |
| SacI | GAGCTC | 2 cut(s) | 2751, 3374 |
| SaqAI | TTAA | 8 cut(s) | 1032, 1079, 1614, 2550, 2987, 3230, 3555, 3648 |
| SatI | GCNGC | 8 cut(s) | 2388, 2460, 2679, 2688, 3207, 3447, 3450, 3753 |
| Sau96I | GGNCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| ScaI | AGTACT | 1 cut(s) | 1261 |
| SchI | GAGTC | 9 cut(s) | 278, 327, 539, 680, 1026, 1643, 2532, 3092, 3495 |
| ScrFI | CCNGG | 5 cut(s) | 893, 1074, 2334, 3039, 3388 |
| SduI | GDGCHC | 5 cut(s) | 2751, 2775, 3347, 3374, 3660 |
| SfcI | CTRYAG | 2 cut(s) | 1689, 3450 |
| Sfr274I | CTCGAG | 1 cut(s) | 3653 |
| SfuI | TTCGAA | 1 cut(s) | 2067 |
| SinI | GGWCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| SlaI | CTCGAG | 1 cut(s) | 3653 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 60, 509, 578, 918, 1793, 2037, 2375, 3600 |
| SmlI | CTYRAG | 7 cut(s) | 343, 849, 1078, 1263, 2281, 2934, 3653 |
| SmoI | CTYRAG | 7 cut(s) | 343, 849, 1078, 1263, 2281, 2934, 3653 |
| SpeI | ACTAGT | 1 cut(s) | 1465 |
| SphI | GCATGC | 1 cut(s) | 1142 |
| SseBI | AGGCCT | 1 cut(s) | 1176 |
| SsiI | CCGC | 4 cut(s) | 433, 1759, 1856, 2460 |
| SspMI | CTAG | 5 cut(s) | 1466, 2018, 2717, 3375, 3769 |
| SstI | GAGCTC | 2 cut(s) | 2751, 3374 |
| StuI | AGGCCT | 1 cut(s) | 1176 |
| StyD4I | CCNGG | 5 cut(s) | 891, 1072, 2332, 3037, 3386 |
| TaiI | ACGT | 4 cut(s) | 269, 509, 885, 2769 |
| TaqII | GACCGA | 2 cut(s) | 246, 1091 |
| TatI | WGTACW | 6 cut(s) | 1259, 1436, 2041, 2277, 2416, 3147 |
| TauI | GCSGC | 1 cut(s) | 2462 |
| TfiI | GAWTC | 6 cut(s) | 458, 896, 1502, 3252, 3529, 3568 |
| Tru1I | TTAA | 8 cut(s) | 1032, 1079, 1614, 2550, 2987, 3230, 3555, 3648 |
| Tru9I | TTAA | 8 cut(s) | 1032, 1079, 1614, 2550, 2987, 3230, 3555, 3648 |
| TseFI | GTSAC | 7 cut(s) | 770, 923, 1051, 1492, 1955, 2135, 3536 |
| TseI | GCWGC | 7 cut(s) | 2387, 2678, 2687, 3206, 3446, 3449, 3752 |
| Tsp45I | GTSAC | 7 cut(s) | 770, 923, 1051, 1492, 1955, 2135, 3536 |
| TspGWI | ACGGA | 1 cut(s) | 3320 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 137, 946 |
| Vha464I | CTTAAG | 1 cut(s) | 1078 |
| VpaK11BI | GGWCC | 4 cut(s) | 1000, 1487, 2010, 2484 |
| VspI | ATTAAT | 1 cut(s) | 1032 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2337 |
| XapI | RAATTY | 4 cut(s) | 76, 353, 1276, 1679 |
| XceI | RCATGY | 2 cut(s) | 971, 1142 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1842, 1926 |
| XhoI | CTCGAG | 1 cut(s) | 3653 |
| XmiI | GTMKAC | 1 cut(s) | 2493 |
| XmnI | GAANNNNTTC | 1 cut(s) | 119 |
| XspI | CTAG | 5 cut(s) | 1466, 2018, 2717, 3375, 3769 |
| ZrmI | AGTACT | 1 cut(s) | 1261 |
| Zsp2I | ATGCAT | 3 cut(s) | 1140, 3198, 3582 |