Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 7 - 195 | 2.6e-57 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 4, 431 |
| AfaI | GTAC | 1 cut(s) | 482 |
| AgsI | TTSAA | 6 cut(s) | 127, 301, 373, 394, 487, 581 |
| AluBI | AGCT | 1 cut(s) | 38 |
| AluI | AGCT | 1 cut(s) | 38 |
| AoxI | GGCC | 1 cut(s) | 442 |
| ApoI | RAATTY | 2 cut(s) | 4, 431 |
| AsuHPI | GGTGA | 1 cut(s) | 305 |
| AxyI | CCTNAGG | 1 cut(s) | 48 |
| BccI | CCATC | 3 cut(s) | 271, 323, 494 |
| BclI | TGATCA | 1 cut(s) | 469 |
| BfaI | CTAG | 1 cut(s) | 456 |
| BglII | AGATCT | 1 cut(s) | 309 |
| BsaWI | WCCGGW | 2 cut(s) | 193, 325 |
| Bse21I | CCTNAGG | 1 cut(s) | 48 |
| Bse3DI | GCAATG | 1 cut(s) | 121 |
| BseGI | GGATG | 1 cut(s) | 334 |
| BseMI | GCAATG | 1 cut(s) | 121 |
| BseRI | GAGGAG | 1 cut(s) | 199 |
| BshFI | GGCC | 1 cut(s) | 444 |
| BsiSI | CCGG | 2 cut(s) | 194, 326 |
| BsnI | GGCC | 1 cut(s) | 444 |
| Bsp143I | GATC | 3 cut(s) | 247, 309, 469 |
| BspANI | GGCC | 1 cut(s) | 444 |
| BsrDI | GCAATG | 1 cut(s) | 121 |
| BssMI | GATC | 3 cut(s) | 247, 309, 469 |
| Bst6I | CTCTTC | 2 cut(s) | 300, 558 |
| BstDEI | CTNAG | 1 cut(s) | 48 |
| BstF5I | GGATG | 1 cut(s) | 334 |
| BstKTI | GATC | 3 cut(s) | 250, 312, 472 |
| BstMBI | GATC | 3 cut(s) | 247, 309, 469 |
| BstX2I | RGATCY | 1 cut(s) | 309 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 411 |
| BstYI | RGATCY | 1 cut(s) | 309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 48 |
| BsuRI | GGCC | 1 cut(s) | 444 |
| BtsCI | GGATG | 1 cut(s) | 334 |
| Csp6I | GTAC | 1 cut(s) | 481 |
| CviAII | CATG | 2 cut(s) | 290, 386 |
| CviJI | RGCY | 4 cut(s) | 38, 281, 390, 444 |
| CviKI_1 | RGCY | 4 cut(s) | 38, 281, 390, 444 |
| CviQI | GTAC | 1 cut(s) | 481 |
| DdeI | CTNAG | 1 cut(s) | 48 |
| DpnI | GATC | 3 cut(s) | 249, 311, 471 |
| DpnII | GATC | 3 cut(s) | 247, 309, 469 |
| Eam1104I | CTCTTC | 2 cut(s) | 300, 558 |
| EarI | CTCTTC | 2 cut(s) | 300, 558 |
| Eco81I | CCTNAGG | 1 cut(s) | 48 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| FaeI | CATG | 2 cut(s) | 293, 389 |
| FatI | CATG | 2 cut(s) | 289, 385 |
| FbaI | TGATCA | 1 cut(s) | 469 |
| FokI | GGATG | 1 cut(s) | 341 |
| FspBI | CTAG | 1 cut(s) | 456 |
| HaeIII | GGCC | 1 cut(s) | 444 |
| HapII | CCGG | 2 cut(s) | 194, 326 |
| Hin1II | CATG | 2 cut(s) | 293, 389 |
| HincII | GTYRAC | 2 cut(s) | 228, 323 |
| HindII | GTYRAC | 2 cut(s) | 228, 323 |
| HinfI | GANTC | 1 cut(s) | 123 |
| HpaI | GTTAAC | 1 cut(s) | 228 |
| HpaII | CCGG | 2 cut(s) | 194, 326 |
| HphI | GGTGA | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 3 cut(s) | 228, 323, 481 |
| Hpy188III | TCNNGA | 3 cut(s) | 251, 456, 487 |
| Hpy8I | GTNNAC | 3 cut(s) | 228, 323, 481 |
| HpyAV | CCTTC | 3 cut(s) | 85, 89, 158 |
| HpyCH4V | TGCA | 6 cut(s) | 72, 155, 239, 262, 366, 496 |
| HpyF3I | CTNAG | 1 cut(s) | 48 |
| Hsp92II | CATG | 2 cut(s) | 293, 389 |
| Ksp22I | TGATCA | 1 cut(s) | 469 |
| KspAI | GTTAAC | 1 cut(s) | 228 |
| Kzo9I | GATC | 3 cut(s) | 247, 309, 469 |
| LpnPI | CCDG | 2 cut(s) | 207, 339 |
| MaeI | CTAG | 1 cut(s) | 456 |
| MalI | GATC | 3 cut(s) | 249, 311, 471 |
| MboI | GATC | 3 cut(s) | 247, 309, 469 |
| MboII | GAAGA | 6 cut(s) | 286, 317, 385, 575, 593, 605 |
| MflI | RGATCY | 1 cut(s) | 309 |
| MluCI | AATT | 7 cut(s) | 4, 41, 213, 355, 431, 448, 576 |
| MnlI | CCTC | 4 cut(s) | 220, 414, 434, 559 |
| MseI | TTAA | 2 cut(s) | 14, 227 |
| MspI | CCGG | 2 cut(s) | 194, 326 |
| NdeII | GATC | 3 cut(s) | 247, 309, 469 |
| NlaIII | CATG | 2 cut(s) | 293, 389 |
| PfeI | GAWTC | 1 cut(s) | 123 |
| PsuI | RGATCY | 1 cut(s) | 309 |
| RsaI | GTAC | 1 cut(s) | 482 |
| RsaNI | GTAC | 1 cut(s) | 481 |
| SaqAI | TTAA | 2 cut(s) | 14, 227 |
| Sau3AI | GATC | 3 cut(s) | 247, 309, 469 |
| SetI | ASST | 4 cut(s) | 40, 100, 258, 425 |
| Sse9I | AATT | 7 cut(s) | 4, 41, 213, 355, 431, 448, 576 |
| SspMI | CTAG | 1 cut(s) | 456 |
| TaqI | TCGA | 2 cut(s) | 267, 561 |
| TasI | AATT | 7 cut(s) | 4, 41, 213, 355, 431, 448, 576 |
| TatI | WGTACW | 1 cut(s) | 480 |
| TfiI | GAWTC | 1 cut(s) | 123 |
| Tru1I | TTAA | 2 cut(s) | 14, 227 |
| Tru9I | TTAA | 2 cut(s) | 14, 227 |
| TspDTI | ATGAA | 5 cut(s) | 17, 195, 318, 374, 606 |
| XapI | RAATTY | 2 cut(s) | 4, 431 |
| XbaI | TCTAGA | 1 cut(s) | 455 |
| XspI | CTAG | 1 cut(s) | 456 |