Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1231, 2582 |
| Acc65I | GGTACC | 1 cut(s) | 2700 |
| AccB1I | GGYRCC | 2 cut(s) | 2552, 2700 |
| AccI | GTMKAC | 2 cut(s) | 417, 2118 |
| AciI | CCGC | 3 cut(s) | 135, 2770, 2776 |
| AclWI | GGATC | 7 cut(s) | 145, 1681, 1694, 2417, 2616, 2653, 2666 |
| AcoI | YGGCCR | 1 cut(s) | 2650 |
| AcsI | RAATTY | 4 cut(s) | 354, 1324, 2597, 2739 |
| AcuI | CTGAAG | 2 cut(s) | 147, 2087 |
| AdeI | CACNNNGTG | 1 cut(s) | 1111 |
| AfaI | GTAC | 4 cut(s) | 1708, 2281, 2342, 2702 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 870, 2591, 2710 |
| AflII | CTTAAG | 1 cut(s) | 1121 |
| AflIII | ACRYGT | 1 cut(s) | 2374 |
| AgeI | ACCGGT | 1 cut(s) | 943 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2005 |
| AjnI | CCWGG | 5 cut(s) | 1569, 2243, 2270, 2500, 2709 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 669, 701, 2631, 2663 |
| AleI | CACNNNNGTG | 1 cut(s) | 2544 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2561, 2593, 2699, 2731 |
| Alw21I | GWGCWC | 2 cut(s) | 1107, 1808 |
| Alw26I | GTCTC | 4 cut(s) | 13, 371, 641, 2672 |
| AlwI | GGATC | 7 cut(s) | 145, 1681, 1694, 2417, 2616, 2653, 2666 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1895 |
| Ama87I | CYCGRG | 1 cut(s) | 914 |
| AoxI | GGCC | 3 cut(s) | 970, 2581, 2650 |
| ApeKI | GCWGC | 5 cut(s) | 986, 1622, 1676, 2212, 2755 |
| ApoI | RAATTY | 4 cut(s) | 354, 1324, 2597, 2739 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 640, 672, 2671, 2703 |
| AseI | ATTAAT | 1 cut(s) | 540 |
| AsiGI | ACCGGT | 1 cut(s) | 943 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 357, 1518, 2334 |
| Asp718I | GGTACC | 1 cut(s) | 2700 |
| AspA2I | CCTAGG | 1 cut(s) | 2542 |
| AspS9I | GGNCC | 3 cut(s) | 2290, 2432, 2582 |
| AsuC2I | CCSGG | 2 cut(s) | 915, 916 |
| AsuHPI | GGTGA | 8 cut(s) | 572, 1553, 1976, 2146, 2437, 2465, 2558, 2680 |
| AsuII | TTCGAA | 1 cut(s) | 2787 |
| AvaI | CYCGRG | 1 cut(s) | 914 |
| AvaII | GGWCC | 2 cut(s) | 2290, 2432 |
| AvrII | CCTAGG | 1 cut(s) | 2542 |
| BalI | TGGCCA | 1 cut(s) | 2652 |
| BamHI | GGATCC | 2 cut(s) | 1686, 2658 |
| BanI | GGYRCC | 2 cut(s) | 2552, 2700 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2060, 2092 |
| Bbv12I | GWGCWC | 2 cut(s) | 1107, 1808 |
| BbvI | GCAGC | 5 cut(s) | 973, 1609, 1663, 2224, 2767 |
| BccI | CCATC | 6 cut(s) | 851, 1409, 1526, 2470, 2527, 2543 |
| BceAI | ACGGC | 1 cut(s) | 1902 |
| BciT130I | CCWGG | 5 cut(s) | 1571, 2245, 2272, 2502, 2711 |
| BclI | TGATCA | 1 cut(s) | 2533 |
| BcnI | CCSGG | 2 cut(s) | 915, 916 |
| BcoDI | GTCTC | 4 cut(s) | 13, 371, 641, 2672 |
| BfmI | CTRYAG | 1 cut(s) | 418 |
| BfrI | CTTAAG | 1 cut(s) | 1121 |
| BfuAI | ACCTGC | 2 cut(s) | 1231, 2582 |
| BglII | AGATCT | 1 cut(s) | 269 |
| BisI | GCNGC | 6 cut(s) | 987, 1623, 1677, 2213, 2756, 2770 |
| BlnI | CCTAGG | 1 cut(s) | 2542 |
| BlsI | GCNGC | 6 cut(s) | 988, 1624, 1678, 2214, 2757, 2771 |
| Bme1390I | CCNGG | 7 cut(s) | 915, 916, 1571, 2245, 2272, 2502, 2711 |
| Bme18I | GGWCC | 2 cut(s) | 2290, 2432 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2005 |
| BmeT110I | CYCGRG | 1 cut(s) | 914 |
| BmgT120I | GGNCC | 3 cut(s) | 2290, 2432, 2582 |
| BmiI | GGNNCC | 8 cut(s) | 56, 199, 862, 1688, 2554, 2660, 2702, 2708 |
| BmrFI | CCNGG | 7 cut(s) | 915, 916, 1571, 2245, 2272, 2502, 2711 |
| BmsI | GCATC | 6 cut(s) | 301, 1534, 1862, 2080, 2272, 2781 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1163, 1195 |
| BpmI | CTGGAG | 2 cut(s) | 263, 428 |
| Bpu14I | TTCGAA | 1 cut(s) | 2787 |
| BpuEI | CTTGAG | 4 cut(s) | 765, 1062, 1911, 2684 |
| BpuMI | CCSGG | 2 cut(s) | 915, 916 |
| BsaJI | CCNNGG | 6 cut(s) | 914, 2157, 2243, 2270, 2542, 2653 |
| BsaWI | WCCGGW | 3 cut(s) | 943, 2617, 2703 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1773, 1803, 2561, 2591, 2699, 2729 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 870, 2591, 2710 |
| Bse118I | RCCGGY | 1 cut(s) | 943 |
| Bse1I | ACTGG | 2 cut(s) | 1303, 1840 |
| BseBI | CCWGG | 5 cut(s) | 1571, 2245, 2272, 2502, 2711 |
| BseDI | CCNNGG | 6 cut(s) | 914, 2157, 2243, 2270, 2542, 2653 |
| BseGI | GGATG | 6 cut(s) | 330, 862, 1798, 2116, 2266, 2772 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 870, 2591, 2710 |
| BseMII | CTCAG | 8 cut(s) | 360, 509, 522, 722, 920, 1004, 1887, 1931 |
| BseNI | ACTGG | 2 cut(s) | 1303, 1840 |
| BseRI | GAGGAG | 1 cut(s) | 659 |
| BseXI | GCAGC | 5 cut(s) | 973, 1609, 1663, 2224, 2767 |
| BsgI | GTGCAG | 1 cut(s) | 2583 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2396 |
| BshFI | GGCC | 3 cut(s) | 972, 2583, 2652 |
| BshNI | GGYRCC | 2 cut(s) | 2552, 2700 |
| BshTI | ACCGGT | 1 cut(s) | 943 |
| BsiEI | CGRYCG | 1 cut(s) | 2396 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1107, 1808 |
| BsiHKCI | CYCGRG | 1 cut(s) | 914 |
| BsiSI | CCGG | 5 cut(s) | 915, 944, 2580, 2618, 2704 |
| BslFI | GGGAC | 1 cut(s) | 1846 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 870, 2591, 2710 |
| BsmAI | GTCTC | 4 cut(s) | 13, 371, 641, 2672 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| BsmFI | GGGAC | 1 cut(s) | 1846 |
| BsmI | GAATGC | 3 cut(s) | 116, 1132, 1662 |
| BsnI | GGCC | 3 cut(s) | 972, 2583, 2652 |
| BsoBI | CYCGRG | 1 cut(s) | 914 |
| Bsp119I | TTCGAA | 1 cut(s) | 2787 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1107, 1808 |
| Bsp19I | CCATGG | 1 cut(s) | 2653 |
| BspACI | CCGC | 3 cut(s) | 135, 2770, 2776 |
| BspANI | GGCC | 3 cut(s) | 972, 2583, 2652 |
| BspCNI | CTCAG | 8 cut(s) | 359, 510, 523, 721, 919, 1003, 1888, 1932 |
| BspLI | GGNNCC | 8 cut(s) | 56, 199, 862, 1688, 2554, 2660, 2702, 2708 |
| BspMI | ACCTGC | 2 cut(s) | 1231, 2582 |
| BspPI | GGATC | 7 cut(s) | 145, 1681, 1694, 2417, 2616, 2653, 2666 |
| BspQI | GCTCTTC | 2 cut(s) | 1796, 2325 |
| BspT104I | TTCGAA | 1 cut(s) | 2787 |
| BspT107I | GGYRCC | 2 cut(s) | 2552, 2700 |
| BspTI | CTTAAG | 1 cut(s) | 1121 |
| BsrFI | RCCGGY | 1 cut(s) | 943 |
| BsrI | ACTGG | 2 cut(s) | 1303, 1840 |
| BssAI | RCCGGY | 1 cut(s) | 943 |
| BssECI | CCNNGG | 6 cut(s) | 914, 2157, 2243, 2270, 2542, 2653 |
| BssT1I | CCWWGG | 3 cut(s) | 2157, 2542, 2653 |
| Bst2UI | CCWGG | 5 cut(s) | 1571, 2245, 2272, 2502, 2711 |
| Bst4CI | ACNGT | 3 cut(s) | 766, 2449, 2627 |
| Bst6I | CTCTTC | 3 cut(s) | 460, 1796, 2325 |
| BstAFI | CTTAAG | 1 cut(s) | 1121 |
| BstBI | TTCGAA | 1 cut(s) | 2787 |
| BstC8I | GCNNGC | 4 cut(s) | 608, 1484, 1627, 2799 |
| BstDSI | CCRYGG | 1 cut(s) | 2653 |
| BstF5I | GGATG | 6 cut(s) | 330, 862, 1798, 2116, 2266, 2772 |
| BstMAI | GTCTC | 4 cut(s) | 13, 371, 641, 2672 |
| BstMCI | CGRYCG | 1 cut(s) | 2396 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 392, 947, 1157, 1812, 1916, 2561, 2775 |
| BstNI | CCWGG | 5 cut(s) | 1571, 2245, 2272, 2502, 2711 |
| BstNSI | RCATGY | 3 cut(s) | 1375, 2378, 2492 |
| BstSCI | CCNGG | 7 cut(s) | 913, 914, 1569, 2243, 2270, 2500, 2709 |
| BstSFI | CTRYAG | 1 cut(s) | 418 |
| BstV1I | GCAGC | 5 cut(s) | 973, 1609, 1663, 2224, 2767 |
| BstX2I | RGATCY | 5 cut(s) | 137, 269, 1686, 2422, 2658 |
| BstYI | RGATCY | 5 cut(s) | 137, 269, 1686, 2422, 2658 |
| BsuRI | GGCC | 3 cut(s) | 972, 2583, 2652 |
| BtgI | CCRYGG | 1 cut(s) | 2653 |
| BtsCI | GGATG | 6 cut(s) | 330, 862, 1798, 2116, 2266, 2772 |
| BtsI | GCAGTG | 1 cut(s) | 1938 |
| BtsIMutI | CAGTG | 4 cut(s) | 204, 771, 1938, 2632 |
| BveI | ACCTGC | 2 cut(s) | 1231, 2582 |
| Cac8I | GCNNGC | 4 cut(s) | 608, 1484, 1627, 2799 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1895 |
| Cfr10I | RCCGGY | 1 cut(s) | 943 |
| Cfr13I | GGNCC | 3 cut(s) | 2290, 2432, 2582 |
| Cfr9I | CCCGGG | 1 cut(s) | 914 |
| CsiI | ACCWGGT | 1 cut(s) | 2500 |
| Csp6I | GTAC | 4 cut(s) | 1707, 2280, 2341, 2701 |
| CspAI | ACCGGT | 1 cut(s) | 943 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 218, 253, 1916, 1951 |
| CviQI | GTAC | 4 cut(s) | 1707, 2280, 2341, 2701 |
| DraIII | CACNNNGTG | 1 cut(s) | 1111 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2005 |
| EaeI | YGGCCR | 1 cut(s) | 2650 |
| Eam1104I | CTCTTC | 3 cut(s) | 460, 1796, 2325 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2005 |
| EarI | CTCTTC | 3 cut(s) | 460, 1796, 2325 |
| EciI | GGCGGA | 1 cut(s) | 2765 |
| Eco130I | CCWWGG | 3 cut(s) | 2157, 2542, 2653 |
| Eco147I | AGGCCT | 1 cut(s) | 972 |
| Eco32I | GATATC | 2 cut(s) | 1258, 2149 |
| Eco47I | GGWCC | 2 cut(s) | 2290, 2432 |
| Eco57I | CTGAAG | 2 cut(s) | 147, 2087 |
| Eco88I | CYCGRG | 1 cut(s) | 914 |
| EcoRII | CCWGG | 5 cut(s) | 1569, 2243, 2270, 2500, 2709 |
| EcoRV | GATATC | 2 cut(s) | 1258, 2149 |
| EcoT14I | CCWWGG | 3 cut(s) | 2157, 2542, 2653 |
| ErhI | CCWWGG | 3 cut(s) | 2157, 2542, 2653 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 124, 156, 1695, 1727 |
| FaqI | GGGAC | 1 cut(s) | 1846 |
| FbaI | TGATCA | 1 cut(s) | 2533 |
| FblI | GTMKAC | 2 cut(s) | 417, 2118 |
| Fnu4HI | GCNGC | 6 cut(s) | 987, 1623, 1677, 2213, 2756, 2770 |
| FokI | GGATG | 6 cut(s) | 317, 869, 1805, 2123, 2253, 2759 |
| Fsp4HI | GCNGC | 6 cut(s) | 987, 1623, 1677, 2213, 2756, 2770 |
| GluI | GCNGC | 6 cut(s) | 987, 1623, 1677, 2213, 2756, 2770 |
| GsuI | CTGGAG | 2 cut(s) | 263, 428 |
| HaeIII | GGCC | 3 cut(s) | 972, 2583, 2652 |
| HapII | CCGG | 5 cut(s) | 915, 944, 2580, 2618, 2704 |
| HincII | GTYRAC | 2 cut(s) | 663, 1069 |
| HindII | GTYRAC | 2 cut(s) | 663, 1069 |
| HindIII | AAGCTT | 1 cut(s) | 1627 |
| HpaII | CCGG | 5 cut(s) | 915, 944, 2580, 2618, 2704 |
| HphI | GGTGA | 8 cut(s) | 572, 1553, 1976, 2146, 2437, 2465, 2558, 2680 |
| Hpy166II | GTNNAC | 9 cut(s) | 147, 265, 298, 418, 663, 1069, 1709, 2119, 2694 |
| Hpy188III | TCNNGA | 7 cut(s) | 304, 1321, 1330, 1457, 1638, 2468, 2531 |
| Hpy8I | GTNNAC | 9 cut(s) | 147, 265, 298, 418, 663, 1069, 1709, 2119, 2694 |
| HpyAV | CCTTC | 5 cut(s) | 44, 286, 842, 988, 1238 |
| HpyCH4III | ACNGT | 3 cut(s) | 766, 2449, 2627 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 392, 947, 1157, 1812, 1916, 2561, 2775 |
| KpnI | GGTACC | 1 cut(s) | 2704 |
| Ksp22I | TGATCA | 1 cut(s) | 2533 |
| LguI | GCTCTTC | 2 cut(s) | 1796, 2325 |
| LmnI | GCTCC | 4 cut(s) | 197, 244, 1156, 1673 |
| Lsp1109I | GCAGC | 5 cut(s) | 973, 1609, 1663, 2224, 2767 |
| LweI | GCATC | 6 cut(s) | 301, 1534, 1862, 2080, 2272, 2781 |
| MabI | ACCWGGT | 1 cut(s) | 2500 |
| MaeIII | GTNAC | 2 cut(s) | 1997, 2453 |
| MfeI | CAATTG | 1 cut(s) | 1914 |
| MflI | RGATCY | 5 cut(s) | 137, 269, 1686, 2422, 2658 |
| MhlI | GDGCHC | 2 cut(s) | 1107, 1808 |
| MlsI | TGGCCA | 1 cut(s) | 2652 |
| MluNI | TGGCCA | 1 cut(s) | 2652 |
| MlyI | GAGTC | 3 cut(s) | 1053, 1172, 2708 |
| MmeI | TCCRAC | 3 cut(s) | 837, 2301, 2742 |
| Mox20I | TGGCCA | 1 cut(s) | 2652 |
| MroXI | GAANNNNTTC | 3 cut(s) | 357, 1518, 2334 |
| MscI | TGGCCA | 1 cut(s) | 2652 |
| MseI | TTAA | 6 cut(s) | 165, 474, 540, 1122, 1743, 2223 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2379, 2544 |
| Msp20I | TGGCCA | 1 cut(s) | 2652 |
| MspCI | CTTAAG | 1 cut(s) | 1121 |
| MspI | CCGG | 5 cut(s) | 915, 944, 2580, 2618, 2704 |
| MspR9I | CCNGG | 7 cut(s) | 915, 916, 1571, 2245, 2272, 2502, 2711 |
| MunI | CAATTG | 1 cut(s) | 1914 |
| Mva1269I | GAATGC | 3 cut(s) | 116, 1132, 1662 |
| MvaI | CCWGG | 5 cut(s) | 1571, 2245, 2272, 2502, 2711 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 392, 947, 1157, 1812, 1916, 2561, 2775 |
| NciI | CCSGG | 2 cut(s) | 915, 916 |
| NcoI | CCATGG | 1 cut(s) | 2653 |
| NlaIV | GGNNCC | 8 cut(s) | 56, 199, 862, 1688, 2554, 2660, 2702, 2708 |
| NmuCI | GTSAC | 2 cut(s) | 1997, 2453 |
| NspI | RCATGY | 3 cut(s) | 1375, 2378, 2492 |
| NspV | TTCGAA | 1 cut(s) | 2787 |
| OliI | CACNNNNGTG | 1 cut(s) | 2544 |
| PceI | AGGCCT | 1 cut(s) | 972 |
| PciI | ACATGT | 1 cut(s) | 2374 |
| PciSI | GCTCTTC | 2 cut(s) | 1796, 2325 |
| PctI | GAATGC | 3 cut(s) | 116, 1132, 1662 |
| PdmI | GAANNNNTTC | 3 cut(s) | 357, 1518, 2334 |
| PfeI | GAWTC | 9 cut(s) | 178, 366, 769, 1553, 1976, 2029, 2178, 2231, 2398 |
| PinAI | ACCGGT | 1 cut(s) | 943 |
| PkrI | GCNGC | 6 cut(s) | 988, 1624, 1678, 2214, 2757, 2771 |
| Ple19I | CGATCG | 1 cut(s) | 2396 |
| PleI | GAGTC | 3 cut(s) | 1052, 1172, 2708 |
| PpsI | GAGTC | 3 cut(s) | 1052, 1172, 2708 |
| PscI | ACATGT | 1 cut(s) | 2374 |
| PshBI | ATTAAT | 1 cut(s) | 540 |
| Psp6I | CCWGG | 5 cut(s) | 1569, 2243, 2270, 2500, 2709 |
| PspGI | CCWGG | 5 cut(s) | 1569, 2243, 2270, 2500, 2709 |
| PspN4I | GGNNCC | 8 cut(s) | 56, 199, 862, 1688, 2554, 2660, 2702, 2708 |
| PspPI | GGNCC | 3 cut(s) | 2290, 2432, 2582 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1895 |
| PsuI | RGATCY | 5 cut(s) | 137, 269, 1686, 2422, 2658 |
| PvuI | CGATCG | 1 cut(s) | 2396 |
| RsaI | GTAC | 4 cut(s) | 1708, 2281, 2342, 2702 |
| RsaNI | GTAC | 4 cut(s) | 1707, 2280, 2341, 2701 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2379, 2544 |
| SapI | GCTCTTC | 2 cut(s) | 1796, 2325 |
| SaqAI | TTAA | 6 cut(s) | 165, 474, 540, 1122, 1743, 2223 |
| SatI | GCNGC | 6 cut(s) | 987, 1623, 1677, 2213, 2756, 2770 |
| Sau96I | GGNCC | 3 cut(s) | 2290, 2432, 2582 |
| SchI | GAGTC | 3 cut(s) | 1053, 1172, 2708 |
| ScrFI | CCNGG | 7 cut(s) | 915, 916, 1571, 2245, 2272, 2502, 2711 |
| SduI | GDGCHC | 2 cut(s) | 1107, 1808 |
| SexAI | ACCWGGT | 1 cut(s) | 2500 |
| SfaNI | GCATC | 6 cut(s) | 301, 1534, 1862, 2080, 2272, 2781 |
| SfcI | CTRYAG | 1 cut(s) | 418 |
| SfuI | TTCGAA | 1 cut(s) | 2787 |
| SinI | GGWCC | 2 cut(s) | 2290, 2432 |
| SmaI | CCCGGG | 1 cut(s) | 916 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2379, 2544 |
| SmlI | CTYRAG | 5 cut(s) | 780, 1077, 1121, 1926, 2663 |
| SmoI | CTYRAG | 5 cut(s) | 780, 1077, 1121, 1926, 2663 |
| SseBI | AGGCCT | 1 cut(s) | 972 |
| SsiI | CCGC | 3 cut(s) | 135, 2770, 2776 |
| StuI | AGGCCT | 1 cut(s) | 972 |
| StyD4I | CCNGG | 7 cut(s) | 913, 914, 1569, 2243, 2270, 2500, 2709 |
| StyI | CCWWGG | 3 cut(s) | 2157, 2542, 2653 |
| TaaI | ACNGT | 3 cut(s) | 766, 2449, 2627 |
| TaqI | TCGA | 4 cut(s) | 1176, 2396, 2401, 2787 |
| TatI | WGTACW | 1 cut(s) | 2340 |
| TauI | GCSGC | 1 cut(s) | 2772 |
| TfiI | GAWTC | 9 cut(s) | 178, 366, 769, 1553, 1976, 2029, 2178, 2231, 2398 |
| Tru1I | TTAA | 6 cut(s) | 165, 474, 540, 1122, 1743, 2223 |
| Tru9I | TTAA | 6 cut(s) | 165, 474, 540, 1122, 1743, 2223 |
| TscAI | CASTG | 4 cut(s) | 211, 771, 1938, 2632 |
| TseFI | GTSAC | 2 cut(s) | 1997, 2453 |
| TseI | GCWGC | 5 cut(s) | 986, 1622, 1676, 2212, 2755 |
| Tsp45I | GTSAC | 2 cut(s) | 1997, 2453 |
| TspGWI | ACGGA | 2 cut(s) | 853, 970 |
| TspMI | CCCGGG | 1 cut(s) | 914 |
| TspRI | CASTG | 4 cut(s) | 211, 771, 1938, 2632 |
| Vha464I | CTTAAG | 1 cut(s) | 1121 |
| VpaK11BI | GGWCC | 2 cut(s) | 2290, 2432 |
| VspI | ATTAAT | 1 cut(s) | 540 |
| XapI | RAATTY | 4 cut(s) | 354, 1324, 2597, 2739 |
| XbaI | TCTAGA | 1 cut(s) | 1456 |
| XceI | RCATGY | 3 cut(s) | 1375, 2378, 2492 |
| XmaI | CCCGGG | 1 cut(s) | 914 |
| XmaJI | CCTAGG | 1 cut(s) | 2542 |
| XmiI | GTMKAC | 2 cut(s) | 417, 2118 |
| XmnI | GAANNNNTTC | 3 cut(s) | 357, 1518, 2334 |