Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 9 - 103 | 2.4e-16 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 70 |
| Acc65I | GGTACC | 1 cut(s) | 548 |
| AccB1I | GGYRCC | 1 cut(s) | 548 |
| AccI | GTMKAC | 1 cut(s) | 960 |
| AciI | CCGC | 1 cut(s) | 305 |
| AcsI | RAATTY | 3 cut(s) | 163, 323, 557 |
| AcuI | CTGAAG | 3 cut(s) | 102, 753, 993 |
| AfaI | GTAC | 5 cut(s) | 404, 507, 550, 649, 659 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| AjnI | CCWGG | 1 cut(s) | 689 |
| AluBI | AGCT | 5 cut(s) | 411, 518, 731, 737, 1004 |
| AluI | AGCT | 5 cut(s) | 411, 518, 731, 737, 1004 |
| Alw26I | GTCTC | 1 cut(s) | 112 |
| AoxI | GGCC | 2 cut(s) | 446, 717 |
| ApeKI | GCWGC | 1 cut(s) | 464 |
| ApoI | RAATTY | 3 cut(s) | 163, 323, 557 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 155, 187 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| Asp718I | GGTACC | 1 cut(s) | 548 |
| AspS9I | GGNCC | 1 cut(s) | 718 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 818 |
| BanI | GGYRCC | 1 cut(s) | 548 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 902, 934 |
| BbsI | GAAGAC | 1 cut(s) | 981 |
| BbvI | GCAGC | 1 cut(s) | 451 |
| BccI | CCATC | 2 cut(s) | 332, 560 |
| BciT130I | CCWGG | 1 cut(s) | 691 |
| BcoDI | GTCTC | 1 cut(s) | 112 |
| BfaI | CTAG | 2 cut(s) | 263, 671 |
| BfmI | CTRYAG | 1 cut(s) | 726 |
| BfuAI | ACCTGC | 1 cut(s) | 70 |
| BisI | GCNGC | 1 cut(s) | 465 |
| BlsI | GCNGC | 1 cut(s) | 466 |
| Bme1390I | CCNGG | 1 cut(s) | 691 |
| BmgT120I | GGNCC | 1 cut(s) | 718 |
| BmiI | GGNNCC | 1 cut(s) | 550 |
| BmrFI | CCNGG | 1 cut(s) | 691 |
| BmsI | GCATC | 2 cut(s) | 761, 1134 |
| BpiI | GAAGAC | 1 cut(s) | 981 |
| BpuEI | CTTGAG | 1 cut(s) | 753 |
| BsaJI | CCNNGG | 1 cut(s) | 690 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 615, 645 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1124 |
| Bse1I | ACTGG | 2 cut(s) | 142, 682 |
| BseBI | CCWGG | 1 cut(s) | 691 |
| BseDI | CCNNGG | 1 cut(s) | 690 |
| BseGI | GGATG | 1 cut(s) | 1149 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| BseMII | CTCAG | 1 cut(s) | 524 |
| BseNI | ACTGG | 2 cut(s) | 142, 682 |
| BseXI | GCAGC | 1 cut(s) | 451 |
| BsgI | GTGCAG | 1 cut(s) | 372 |
| BshFI | GGCC | 2 cut(s) | 448, 719 |
| BshNI | GGYRCC | 1 cut(s) | 548 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| BsmAI | GTCTC | 1 cut(s) | 112 |
| BsmI | GAATGC | 2 cut(s) | 683, 934 |
| BsnI | GGCC | 2 cut(s) | 448, 719 |
| Bsp143I | GATC | 2 cut(s) | 451, 1136 |
| BspACI | CCGC | 1 cut(s) | 305 |
| BspANI | GGCC | 2 cut(s) | 448, 719 |
| BspCNI | CTCAG | 1 cut(s) | 525 |
| BspLI | GGNNCC | 1 cut(s) | 550 |
| BspMI | ACCTGC | 1 cut(s) | 70 |
| BspT107I | GGYRCC | 1 cut(s) | 548 |
| BsrI | ACTGG | 2 cut(s) | 142, 682 |
| BssECI | CCNNGG | 1 cut(s) | 690 |
| BssMI | GATC | 2 cut(s) | 451, 1136 |
| Bst2UI | CCWGG | 1 cut(s) | 691 |
| Bst4CI | ACNGT | 1 cut(s) | 887 |
| Bst6I | CTCTTC | 2 cut(s) | 781, 933 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 758 |
| BstC8I | GCNNGC | 1 cut(s) | 385 |
| BstDEI | CTNAG | 2 cut(s) | 533, 782 |
| BstF5I | GGATG | 1 cut(s) | 1149 |
| BstKTI | GATC | 2 cut(s) | 454, 1139 |
| BstMAI | GTCTC | 1 cut(s) | 112 |
| BstMBI | GATC | 2 cut(s) | 451, 1136 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 758 |
| BstNI | CCWGG | 1 cut(s) | 691 |
| BstSCI | CCNGG | 1 cut(s) | 689 |
| BstSFI | CTRYAG | 1 cut(s) | 726 |
| BstV1I | GCAGC | 1 cut(s) | 451 |
| BstV2I | GAAGAC | 1 cut(s) | 981 |
| BsuRI | GGCC | 2 cut(s) | 448, 719 |
| BtsCI | GGATG | 1 cut(s) | 1149 |
| BtsI | GCAGTG | 1 cut(s) | 634 |
| BtsIMutI | CAGTG | 2 cut(s) | 634, 720 |
| BveI | ACCTGC | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 385 |
| Cfr13I | GGNCC | 1 cut(s) | 718 |
| Csp6I | GTAC | 5 cut(s) | 403, 506, 549, 648, 658 |
| CviAII | CATG | 1 cut(s) | 214 |
| CviQI | GTAC | 5 cut(s) | 403, 506, 549, 648, 658 |
| DdeI | CTNAG | 2 cut(s) | 533, 782 |
| DpnI | GATC | 2 cut(s) | 453, 1138 |
| DpnII | GATC | 2 cut(s) | 451, 1136 |
| Eam1104I | CTCTTC | 2 cut(s) | 781, 933 |
| EarI | CTCTTC | 2 cut(s) | 781, 933 |
| Eco147I | AGGCCT | 1 cut(s) | 448 |
| Eco32I | GATATC | 1 cut(s) | 991 |
| Eco57I | CTGAAG | 3 cut(s) | 102, 753, 993 |
| EcoRII | CCWGG | 1 cut(s) | 689 |
| EcoRV | GATATC | 1 cut(s) | 991 |
| EcoT22I | ATGCAT | 1 cut(s) | 219 |
| FaeI | CATG | 1 cut(s) | 217 |
| FatI | CATG | 1 cut(s) | 213 |
| FblI | GTMKAC | 1 cut(s) | 960 |
| Fnu4HI | GCNGC | 1 cut(s) | 465 |
| FokI | GGATG | 1 cut(s) | 1156 |
| Fsp4HI | GCNGC | 1 cut(s) | 465 |
| FspBI | CTAG | 2 cut(s) | 263, 671 |
| GluI | GCNGC | 1 cut(s) | 465 |
| HaeIII | GGCC | 2 cut(s) | 448, 719 |
| Hin1II | CATG | 1 cut(s) | 217 |
| HindIII | AAGCTT | 1 cut(s) | 409 |
| HinfI | GANTC | 6 cut(s) | 13, 210, 529, 789, 1099, 1163 |
| HphI | GGTGA | 2 cut(s) | 16, 818 |
| Hpy166II | GTNNAC | 3 cut(s) | 508, 660, 961 |
| Hpy188I | TCNGA | 3 cut(s) | 175, 456, 534 |
| Hpy188III | TCNNGA | 2 cut(s) | 263, 480 |
| Hpy8I | GTNNAC | 3 cut(s) | 508, 660, 961 |
| HpyAV | CCTTC | 2 cut(s) | 77, 937 |
| HpyCH4III | ACNGT | 1 cut(s) | 887 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 758 |
| HpyF3I | CTNAG | 2 cut(s) | 533, 782 |
| Hsp92II | CATG | 1 cut(s) | 217 |
| KpnI | GGTACC | 1 cut(s) | 552 |
| Kzo9I | GATC | 2 cut(s) | 451, 1136 |
| LmnI | GCTCC | 2 cut(s) | 515, 1127 |
| LpnPI | CCDG | 8 cut(s) | 75, 123, 462, 493, 639, 663, 676, 703 |
| Lsp1109I | GCAGC | 1 cut(s) | 451 |
| LweI | GCATC | 2 cut(s) | 761, 1134 |
| MaeI | CTAG | 2 cut(s) | 263, 671 |
| MaeIII | GTNAC | 3 cut(s) | 295, 817, 1096 |
| MalI | GATC | 2 cut(s) | 453, 1138 |
| MboI | GATC | 2 cut(s) | 451, 1136 |
| MboII | GAAGA | 6 cut(s) | 161, 347, 798, 809, 950, 986 |
| MlyI | GAGTC | 2 cut(s) | 798, 1093 |
| MmeI | TCCRAC | 1 cut(s) | 1105 |
| MnlI | CCTC | 4 cut(s) | 519, 570, 617, 940 |
| Mph1103I | ATGCAT | 1 cut(s) | 219 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MseI | TTAA | 2 cut(s) | 273, 413 |
| MspA1I | CMGCKG | 1 cut(s) | 731 |
| MspR9I | CCNGG | 1 cut(s) | 691 |
| Mva1269I | GAATGC | 2 cut(s) | 683, 934 |
| MvaI | CCWGG | 1 cut(s) | 691 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 758 |
| NdeII | GATC | 2 cut(s) | 451, 1136 |
| NlaIII | CATG | 1 cut(s) | 217 |
| NlaIV | GGNNCC | 1 cut(s) | 550 |
| NmuCI | GTSAC | 1 cut(s) | 1096 |
| NsiI | ATGCAT | 1 cut(s) | 219 |
| PceI | AGGCCT | 1 cut(s) | 448 |
| PctI | GAATGC | 2 cut(s) | 683, 934 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PfeI | GAWTC | 3 cut(s) | 13, 210, 529 |
| PkrI | GCNGC | 1 cut(s) | 466 |
| PleI | GAGTC | 2 cut(s) | 797, 1093 |
| PpsI | GAGTC | 2 cut(s) | 797, 1093 |
| Psp6I | CCWGG | 1 cut(s) | 689 |
| PspGI | CCWGG | 1 cut(s) | 689 |
| PspN4I | GGNNCC | 1 cut(s) | 550 |
| PspPI | GGNCC | 1 cut(s) | 718 |
| PvuII | CAGCTG | 1 cut(s) | 731 |
| RsaI | GTAC | 5 cut(s) | 404, 507, 550, 649, 659 |
| RsaNI | GTAC | 5 cut(s) | 403, 506, 549, 648, 658 |
| SaqAI | TTAA | 2 cut(s) | 273, 413 |
| SatI | GCNGC | 1 cut(s) | 465 |
| Sau3AI | GATC | 2 cut(s) | 451, 1136 |
| Sau96I | GGNCC | 1 cut(s) | 718 |
| SchI | GAGTC | 2 cut(s) | 798, 1093 |
| ScrFI | CCNGG | 1 cut(s) | 691 |
| SfaNI | GCATC | 2 cut(s) | 761, 1134 |
| SfcI | CTRYAG | 1 cut(s) | 726 |
| SmlI | CTYRAG | 1 cut(s) | 768 |
| SmoI | CTYRAG | 1 cut(s) | 768 |
| SseBI | AGGCCT | 1 cut(s) | 448 |
| SsiI | CCGC | 1 cut(s) | 305 |
| SspMI | CTAG | 2 cut(s) | 263, 671 |
| StuI | AGGCCT | 1 cut(s) | 448 |
| StyD4I | CCNGG | 1 cut(s) | 689 |
| TaaI | ACNGT | 1 cut(s) | 887 |
| TaqI | TCGA | 1 cut(s) | 555 |
| TatI | WGTACW | 3 cut(s) | 402, 505, 647 |
| TfiI | GAWTC | 3 cut(s) | 13, 210, 529 |
| Tru1I | TTAA | 2 cut(s) | 273, 413 |
| Tru9I | TTAA | 2 cut(s) | 273, 413 |
| TscAI | CASTG | 2 cut(s) | 634, 720 |
| TseFI | GTSAC | 1 cut(s) | 1096 |
| TseI | GCWGC | 1 cut(s) | 464 |
| Tsp45I | GTSAC | 1 cut(s) | 1096 |
| TspDTI | ATGAA | 6 cut(s) | 72, 207, 317, 333, 1033, 1041 |
| TspGWI | ACGGA | 1 cut(s) | 1156 |
| TspRI | CASTG | 2 cut(s) | 634, 720 |
| XapI | RAATTY | 3 cut(s) | 163, 323, 557 |
| XbaI | TCTAGA | 1 cut(s) | 262 |
| XmiI | GTMKAC | 1 cut(s) | 960 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |
| XspI | CTAG | 2 cut(s) | 263, 671 |
| Zsp2I | ATGCAT | 1 cut(s) | 219 |