RchiOBHm_Chr5g0064041

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000154
Physical Location & Seq
Reverse (-)
69852573 .. 69853877
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34011

Sequence Viewer

Length: 1080 bp
ATGGAGCTCTTCTTCAAAATAATGGAGTATACAGAGGTGGTGATCAATGGATTTACAGATCCAGGAGACCAAGCAAATCTCACACAAAATCAGAGGGAGGAACTGATTCGAAACAGGAAGAAAGATAACAGAGCCCTGATGTATATTTATGGAGCAATTGATTCTGAAATCTATGAGAAGATTGCACATGTTACCACATCGAAGGAGGCCTGGGATTGTCTGATCAATACCTTTGTGGGAAGAGATAAAGTGAAGAAGGTGAGATTGCAGACTCTACGACGACAGTTCGAGCTTCTTCAGATGGAGAAAAAAGAAAGTATCTCCGATTACTTTGCAAGGACATTGGCCATTGTCAATCAAATGAAGGCCAATGGGGAGGTTATCAAAGAACTCCAGATTGTGGAGAAAATCCTTCGAACCTTGACGGAGCGGTTTGACGGAAAGGTCACAGCCATTGAGGAGTCTCAAGACCTTAATGCTATGATGGTGGATAACTTAATGAGTTCCTTGCAGGCCTATGAACAAAGGCTGAATGAGAAGTCGGAAATGGTGATTGAAGAAGCATTGCAGACTCAGTTAAGCTTCAAAAAGGAGAAAAATTGGTCGTCTCGTGGTGAGTCAAGCTCAACTCAGAAGAACCAAAACTCAAGTTACAAGAGAGGTTCACAAGGCAGATTTGGAACAAGAAGAGGAAGAGGAAGGGGCTTTCATTGGAGTCAAGGAAGAGATAGAGCAAATGTCCAGTGCTTTAATTGTTATGGATATGGTCATTACAAAAATGAATGTAGCTTGAGAAGGTCGGAGAACAAGCAGTTTCATGCCAAGTTTGCAGAGGACAACAATGACAGTGAAGAGACTTTGTTGATGGCTTTCAGTGCTATGAGTAATGGTGAACAGATCACATGGTACCTGGACACAGGCTGTAGCAATCATATGTCCGGTCACAAGGAGTTGTTCGTTGAGCTAAATGAGTCAATACAGTCAGAGATTACATTTGGGAATGCTGCAAGGATGCCAGTTAAAGGAAAGGGCAAGATTTCTATCCAGCTGAAGAATGGGATGTACAACACCATATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4219 Retrotran_gag_2 zf-CCHC

Protein Analysis

359

Amino Acids

41.48

Weight (kDa)

8.61

Isoelectric Point (pI)

43.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 28 - 181 2.1e-27 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 302 - 358 2.7e-16 Pol polyprotein, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 443
Acc65I GGTACC 1 cut(s) 906
AccB1I GGYRCC 1 cut(s) 906
AccB7I CCANNNNNTGG 1 cut(s) 400
AccBSI CCGCTC 1 cut(s) 430
AccI GTMKAC 1 cut(s) 29
AciI CCGC 1 cut(s) 430
AclWI GGATC 1 cut(s) 53
AcoI YGGCCR 1 cut(s) 345
AcuI CTGAAG 2 cut(s) 281, 1070
AfaI GTAC 2 cut(s) 908, 1064
AfiI CCNNNNNNNGG 2 cut(s) 400, 1022
AflIII ACRYGT 1 cut(s) 187
AgsI TTSAA 3 cut(s) 16, 557, 586
AjnI CCWGG 3 cut(s) 61, 209, 909
AluBI AGCT 7 cut(s) 7, 292, 582, 624, 789, 964, 1048
AluI AGCT 7 cut(s) 7, 292, 582, 624, 789, 964, 1048
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 4 cut(s) 60, 468, 612, 848
AlwI GGATC 1 cut(s) 53
AoxI GGCC 4 cut(s) 207, 345, 366, 513
ApeKI GCWGC 1 cut(s) 1004
Asp700I GAANNNNTTC 1 cut(s) 105
Asp718I GGTACC 1 cut(s) 906
AsuHPI GGTGA 5 cut(s) 52, 271, 562, 626, 902
AsuII TTCGAA 2 cut(s) 109, 415
BalI TGGCCA 1 cut(s) 347
BanI GGYRCC 1 cut(s) 906
BanII GRGCYC 2 cut(s) 9, 136
BauI CACGAG 1 cut(s) 609
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 1 cut(s) 991
BccI CCATC 3 cut(s) 295, 478, 859
BcgI CGANNNNNNTGC 2 cut(s) 314, 348
BciT130I CCWGG 3 cut(s) 63, 211, 911
BclI TGATCA 2 cut(s) 42, 222
BcoDI GTCTC 4 cut(s) 60, 468, 612, 848
BfmI CTRYAG 1 cut(s) 922
BisI GCNGC 1 cut(s) 1005
BlsI GCNGC 1 cut(s) 1006
Bme1390I CCNGG 3 cut(s) 63, 211, 911
BmiI GGNNCC 1 cut(s) 908
BmrFI CCNGG 3 cut(s) 63, 211, 911
BmsI GCATC 1 cut(s) 1002
BplI GAGNNNNNCTC 2 cut(s) 608, 640
BpmI CTGGAG 1 cut(s) 377
Bpu14I TTCGAA 2 cut(s) 109, 415
BpuEI CTTGAG 3 cut(s) 450, 631, 811
BsaBI GATNNNNATC 1 cut(s) 1040
BsaI GGTCTC 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 210
BsaWI WCCGGW 1 cut(s) 938
Bsc4I CCNNNNNNNGG 2 cut(s) 400, 1022
Bse1I ACTGG 2 cut(s) 742, 1016
Bse3DI GCAATG 1 cut(s) 563
Bse8I GATNNNNATC 1 cut(s) 1040
BseBI CCWGG 3 cut(s) 63, 211, 911
BseDI CCNNGG 1 cut(s) 210
BseGI GGATG 2 cut(s) 1017, 1065
BseJI GATNNNNATC 1 cut(s) 1040
BseLI CCNNNNNNNGG 2 cut(s) 400, 1022
BseMI GCAATG 1 cut(s) 563
BseMII CTCAG 2 cut(s) 587, 644
BseNI ACTGG 2 cut(s) 742, 1016
BseRI GAGGAG 1 cut(s) 473
BseXI GCAGC 1 cut(s) 991
BshFI GGCC 4 cut(s) 209, 347, 368, 515
BshNI GGYRCC 1 cut(s) 906
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 1 cut(s) 939
BslI CCNNNNNNNGG 2 cut(s) 400, 1022
BsmAI GTCTC 4 cut(s) 60, 468, 612, 848
BsmBI CGTCTC 1 cut(s) 612
BsmI GAATGC 1 cut(s) 1006
BsnI GGCC 4 cut(s) 209, 347, 368, 515
Bso31I GGTCTC 1 cut(s) 60
Bsp119I TTCGAA 2 cut(s) 109, 415
Bsp1286I GDGCHC 2 cut(s) 9, 136
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 4 cut(s) 42, 58, 222, 897
BspACI CCGC 1 cut(s) 430
BspANI GGCC 4 cut(s) 209, 347, 368, 515
BspCNI CTCAG 2 cut(s) 586, 643
BspHI TCATGA 1 cut(s) 1076
BspLI GGNNCC 1 cut(s) 908
BspPI GGATC 1 cut(s) 53
BspQI GCTCTTC 1 cut(s) 14
BspT104I TTCGAA 2 cut(s) 109, 415
BspT107I GGYRCC 1 cut(s) 906
BspTNI GGTCTC 1 cut(s) 60
BsrBI CCGCTC 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 563
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 2 cut(s) 742, 1016
BssECI CCNNGG 1 cut(s) 210
BssMI GATC 4 cut(s) 42, 58, 222, 897
BssNAI GTATAC 1 cut(s) 30
BssSI CACGAG 1 cut(s) 609
Bst1107I GTATAC 1 cut(s) 30
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 3 cut(s) 63, 211, 911
Bst4CI ACNGT 3 cut(s) 285, 848, 981
Bst6I CTCTTC 6 cut(s) 14, 235, 682, 688, 718, 846
BstAUI TGTACA 1 cut(s) 1062
BstBI TTCGAA 2 cut(s) 109, 415
BstC8I GCNNGC 1 cut(s) 513
BstDEI CTNAG 2 cut(s) 573, 630
BstF5I GGATG 2 cut(s) 1017, 1065
BstKTI GATC 4 cut(s) 45, 61, 225, 900
BstMAI GTCTC 4 cut(s) 60, 468, 612, 848
BstMBI GATC 4 cut(s) 42, 58, 222, 897
BstMWI GCNNNNNNNGC 2 cut(s) 827, 875
BstNI CCWGG 3 cut(s) 63, 211, 911
BstNSI RCATGY 1 cut(s) 191
BstSCI CCNGG 3 cut(s) 61, 209, 909
BstSFI CTRYAG 1 cut(s) 922
BstV1I GCAGC 1 cut(s) 991
BstX2I RGATCY 1 cut(s) 58
BstYI RGATCY 1 cut(s) 58
BstZ17I GTATAC 1 cut(s) 30
BsuRI GGCC 4 cut(s) 209, 347, 368, 515
BtsCI GGATG 2 cut(s) 1017, 1065
BtsIMutI CAGTG 3 cut(s) 749, 853, 880
Cac8I GCNNGC 1 cut(s) 513
CciI TCATGA 1 cut(s) 1076
Csp6I GTAC 2 cut(s) 907, 1063
CviAII CATG 4 cut(s) 188, 818, 903, 1077
CviQI GTAC 2 cut(s) 907, 1063
DdeI CTNAG 2 cut(s) 573, 630
DpnI GATC 4 cut(s) 44, 60, 224, 899
DpnII GATC 4 cut(s) 42, 58, 222, 897
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
EaeI YGGCCR 1 cut(s) 345
Eam1104I CTCTTC 6 cut(s) 14, 235, 682, 688, 718, 846
EarI CTCTTC 6 cut(s) 14, 235, 682, 688, 718, 846
Ecl136II GAGCTC 1 cut(s) 7
Eco147I AGGCCT 2 cut(s) 209, 515
Eco24I GRGCYC 2 cut(s) 9, 136
Eco31I GGTCTC 1 cut(s) 60
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 2 cut(s) 281, 1070
EcoICRI GAGCTC 1 cut(s) 7
EcoRII CCWGG 3 cut(s) 61, 209, 909
EcoT38I GRGCYC 2 cut(s) 9, 136
Esp3I CGTCTC 1 cut(s) 612
FaeI CATG 4 cut(s) 191, 821, 906, 1080
FatI CATG 4 cut(s) 187, 817, 902, 1076
FauNDI CATATG 1 cut(s) 933
FbaI TGATCA 2 cut(s) 42, 222
FblI GTMKAC 1 cut(s) 29
Fnu4HI GCNGC 1 cut(s) 1005
FokI GGATG 2 cut(s) 1024, 1072
FriOI GRGCYC 2 cut(s) 9, 136
Fsp4HI GCNGC 1 cut(s) 1005
GluI GCNGC 1 cut(s) 1005
GsuI CTGGAG 1 cut(s) 377
HaeIII GGCC 4 cut(s) 209, 347, 368, 515
HapII CCGG 1 cut(s) 939
Hin1II CATG 4 cut(s) 191, 821, 906, 1080
HindIII AAGCTT 1 cut(s) 580
HinfI GANTC 8 cut(s) 106, 161, 271, 461, 571, 617, 715, 971
HpaII CCGG 1 cut(s) 939
HphI GGTGA 5 cut(s) 52, 271, 562, 626, 902
Hpy166II GTNNAC 3 cut(s) 30, 665, 893
Hpy188I TCNGA 9 cut(s) 93, 166, 222, 300, 325, 544, 633, 802, 985
Hpy188III TCNNGA 3 cut(s) 394, 467, 1077
Hpy8I GTNNAC 3 cut(s) 30, 665, 893
Hpy99I CGWCG 1 cut(s) 282
HpyAV CCTTC 6 cut(s) 196, 250, 358, 422, 693, 789
HpyCH4III ACNGT 3 cut(s) 285, 848, 981
HpyCH4V TGCA 7 cut(s) 185, 268, 335, 511, 568, 830, 1007
HpyF10VI GCNNNNNNNGC 2 cut(s) 827, 875
HpyF3I CTNAG 2 cut(s) 573, 630
Hsp92II CATG 4 cut(s) 191, 821, 906, 1080
KpnI GGTACC 1 cut(s) 910
Ksp22I TGATCA 2 cut(s) 42, 222
Kzo9I GATC 4 cut(s) 42, 58, 222, 897
LguI GCTCTTC 1 cut(s) 14
LmnI GCTCC 3 cut(s) 4, 152, 427
Lsp1109I GCAGC 1 cut(s) 991
LweI GCATC 1 cut(s) 1002
MaeIII GTNAC 4 cut(s) 190, 445, 650, 941
MalI GATC 4 cut(s) 44, 60, 224, 899
MbiI CCGCTC 1 cut(s) 430
MboI GATC 4 cut(s) 42, 58, 222, 897
MfeI CAATTG 1 cut(s) 156
MflI RGATCY 1 cut(s) 58
MhlI GDGCHC 2 cut(s) 9, 136
MlsI TGGCCA 1 cut(s) 347
MluCI AATT 3 cut(s) 156, 598, 751
MluNI TGGCCA 1 cut(s) 347
MlyI GAGTC 6 cut(s) 265, 470, 565, 626, 724, 980
MmeI TCCRAC 2 cut(s) 522, 780
Mox20I TGGCCA 1 cut(s) 347
MroXI GAANNNNTTC 1 cut(s) 105
MscI TGGCCA 1 cut(s) 347
MseI TTAA 5 cut(s) 474, 497, 578, 750, 1020
Msp20I TGGCCA 1 cut(s) 347
MspA1I CMGCKG 1 cut(s) 1048
MspI CCGG 1 cut(s) 939
MspR9I CCNGG 3 cut(s) 63, 211, 911
MunI CAATTG 1 cut(s) 156
Mva1269I GAATGC 1 cut(s) 1006
MvaI CCWGG 3 cut(s) 63, 211, 911
MwoI GCNNNNNNNGC 2 cut(s) 827, 875
NdeI CATATG 1 cut(s) 933
NdeII GATC 4 cut(s) 42, 58, 222, 897
NlaIII CATG 4 cut(s) 191, 821, 906, 1080
NlaIV GGNNCC 1 cut(s) 908
NmuCI GTSAC 2 cut(s) 445, 941
NspI RCATGY 1 cut(s) 191
NspV TTCGAA 2 cut(s) 109, 415
PagI TCATGA 1 cut(s) 1076
PceI AGGCCT 2 cut(s) 209, 515
PciI ACATGT 1 cut(s) 187
PciSI GCTCTTC 1 cut(s) 14
PctI GAATGC 1 cut(s) 1006
PdmI GAANNNNTTC 1 cut(s) 105
PfeI GAWTC 2 cut(s) 106, 161
PflMI CCANNNNNTGG 1 cut(s) 400
PfoI TCCNGGA 1 cut(s) 61
PkrI GCNGC 1 cut(s) 1006
PleI GAGTC 6 cut(s) 265, 469, 565, 625, 723, 979
PpsI GAGTC 6 cut(s) 265, 469, 565, 625, 723, 979
PscI ACATGT 1 cut(s) 187
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 3 cut(s) 61, 209, 909
PspGI CCWGG 3 cut(s) 61, 209, 909
PspN4I GGNNCC 1 cut(s) 908
PsuI RGATCY 1 cut(s) 58
PvuII CAGCTG 1 cut(s) 1048
RsaI GTAC 2 cut(s) 908, 1064
RsaNI GTAC 2 cut(s) 907, 1063
SacI GAGCTC 1 cut(s) 9
SapI GCTCTTC 1 cut(s) 14
SaqAI TTAA 5 cut(s) 474, 497, 578, 750, 1020
SatI GCNGC 1 cut(s) 1005
Sau3AI GATC 4 cut(s) 42, 58, 222, 897
SchI GAGTC 6 cut(s) 265, 470, 565, 626, 724, 980
ScrFI CCNGG 3 cut(s) 63, 211, 911
SduI GDGCHC 2 cut(s) 9, 136
SfaNI GCATC 1 cut(s) 1002
SfcI CTRYAG 1 cut(s) 922
SfuI TTCGAA 2 cut(s) 109, 415
SmlI CTYRAG 3 cut(s) 465, 646, 790
SmoI CTYRAG 3 cut(s) 465, 646, 790
Sse9I AATT 3 cut(s) 156, 598, 751
SseBI AGGCCT 2 cut(s) 209, 515
SsiI CCGC 1 cut(s) 430
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 2 cut(s) 209, 515
StyD4I CCNGG 3 cut(s) 61, 209, 909
TaaI ACNGT 3 cut(s) 285, 848, 981
TaqI TCGA 4 cut(s) 109, 200, 288, 415
TasI AATT 3 cut(s) 156, 598, 751
TatI WGTACW 1 cut(s) 1062
TfiI GAWTC 2 cut(s) 106, 161
Tru1I TTAA 5 cut(s) 474, 497, 578, 750, 1020
Tru9I TTAA 5 cut(s) 474, 497, 578, 750, 1020
TscAI CASTG 3 cut(s) 749, 853, 880
TseFI GTSAC 2 cut(s) 445, 941
TseI GCWGC 1 cut(s) 1004
Tsp45I GTSAC 2 cut(s) 445, 941
TspDTI ATGAA 5 cut(s) 377, 534, 698, 795, 806
TspGWI ACGGA 2 cut(s) 440, 453
TspRI CASTG 3 cut(s) 749, 853, 880
Van91I CCANNNNNTGG 1 cut(s) 400
XceI RCATGY 1 cut(s) 191
XcmI CCANNNNNNNNNTGG 1 cut(s) 1052
XmiI GTMKAC 1 cut(s) 29
XmnI GAANNNNTTC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.