DNA binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 162 |
| AgsI | TTSAA | 2 cut(s) | 34, 120 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 216, 248 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| Alw21I | GWGCWC | 1 cut(s) | 63 |
| Alw44I | GTGCAC | 1 cut(s) | 59 |
| ApaLI | GTGCAC | 1 cut(s) | 59 |
| ApeKI | GCWGC | 2 cut(s) | 101, 152 |
| ApoI | RAATTY | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 1 cut(s) | 272 |
| BaeGI | GKGCMC | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 1 cut(s) | 63 |
| BbvI | GCAGC | 2 cut(s) | 88, 164 |
| BccI | CCATC | 1 cut(s) | 263 |
| BclI | TGATCA | 1 cut(s) | 262 |
| BisI | GCNGC | 2 cut(s) | 102, 153 |
| BlsI | GCNGC | 2 cut(s) | 103, 154 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| BseRI | GAGGAG | 1 cut(s) | 231 |
| BseSI | GKGCMC | 1 cut(s) | 63 |
| BseXI | GCAGC | 2 cut(s) | 88, 164 |
| BsiHKAI | GWGCWC | 1 cut(s) | 63 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 63 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspHI | TCATGA | 1 cut(s) | 133 |
| BssMI | GATC | 1 cut(s) | 262 |
| Bst4CI | ACNGT | 2 cut(s) | 187, 248 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstNSI | RCATGY | 1 cut(s) | 15 |
| BstSLI | GKGCMC | 1 cut(s) | 63 |
| BstV1I | GCAGC | 2 cut(s) | 88, 164 |
| BtsIMutI | CAGTG | 1 cut(s) | 253 |
| CciI | TCATGA | 1 cut(s) | 133 |
| CviAII | CATG | 4 cut(s) | 12, 27, 65, 134 |
| CviJI | RGCY | 3 cut(s) | 101, 237, 273 |
| CviKI_1 | RGCY | 3 cut(s) | 101, 237, 273 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| FaeI | CATG | 4 cut(s) | 15, 30, 68, 137 |
| FaiI | YATR | 6 cut(s) | 13, 28, 66, 135, 174, 255 |
| FatI | CATG | 4 cut(s) | 11, 26, 64, 133 |
| FbaI | TGATCA | 1 cut(s) | 262 |
| Fnu4HI | GCNGC | 2 cut(s) | 102, 153 |
| Fsp4HI | GCNGC | 2 cut(s) | 102, 153 |
| GluI | GCNGC | 2 cut(s) | 102, 153 |
| HapII | CCGG | 1 cut(s) | 125 |
| Hin1II | CATG | 4 cut(s) | 15, 30, 68, 137 |
| HpaII | CCGG | 1 cut(s) | 125 |
| HphI | GGTGA | 1 cut(s) | 272 |
| Hpy166II | GTNNAC | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 61 |
| HpyAV | CCTTC | 1 cut(s) | 205 |
| HpyCH4III | ACNGT | 2 cut(s) | 187, 248 |
| HpyCH4IV | ACGT | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 3 cut(s) | 61, 68, 109 |
| HpySE526I | ACGT | 1 cut(s) | 80 |
| Hsp92II | CATG | 4 cut(s) | 15, 30, 68, 137 |
| Ksp22I | TGATCA | 1 cut(s) | 262 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LpnPI | CCDG | 3 cut(s) | 87, 138, 243 |
| Lsp1109I | GCAGC | 2 cut(s) | 88, 164 |
| MaeII | ACGT | 1 cut(s) | 80 |
| MaeIII | GTNAC | 4 cut(s) | 4, 22, 76, 89 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 3 cut(s) | 46, 108, 236 |
| MhlI | GDGCHC | 1 cut(s) | 63 |
| MluCI | AATT | 1 cut(s) | 162 |
| MnlI | CCTC | 1 cut(s) | 209 |
| MseI | TTAA | 1 cut(s) | 167 |
| MspI | CCGG | 1 cut(s) | 125 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 4 cut(s) | 15, 30, 68, 137 |
| NmuCI | GTSAC | 3 cut(s) | 4, 22, 89 |
| NspI | RCATGY | 1 cut(s) | 15 |
| PagI | TCATGA | 1 cut(s) | 133 |
| PkrI | GCNGC | 2 cut(s) | 103, 154 |
| SaqAI | TTAA | 1 cut(s) | 167 |
| SatI | GCNGC | 2 cut(s) | 102, 153 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| SduI | GDGCHC | 1 cut(s) | 63 |
| SetI | ASST | 4 cut(s) | 76, 83, 103, 173 |
| Sse9I | AATT | 1 cut(s) | 162 |
| TaaI | ACNGT | 2 cut(s) | 187, 248 |
| TaiI | ACGT | 1 cut(s) | 83 |
| TasI | AATT | 1 cut(s) | 162 |
| Tru1I | TTAA | 1 cut(s) | 167 |
| Tru9I | TTAA | 1 cut(s) | 167 |
| TscAI | CASTG | 1 cut(s) | 253 |
| TseFI | GTSAC | 3 cut(s) | 4, 22, 89 |
| TseI | GCWGC | 2 cut(s) | 101, 152 |
| Tsp45I | GTSAC | 3 cut(s) | 4, 22, 89 |
| TspDTI | ATGAA | 3 cut(s) | 122, 150, 237 |
| TspGWI | ACGGA | 1 cut(s) | 257 |
| TspRI | CASTG | 1 cut(s) | 253 |
| VneI | GTGCAC | 1 cut(s) | 59 |
| XapI | RAATTY | 1 cut(s) | 162 |
| XceI | RCATGY | 1 cut(s) | 15 |